miRTarBase - #MIRT520917


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pre-miRNA Information
pre-miRNA hsa-mir-4794   
Genomic Coordinates chr1: 64579847 - 64579923
Description Homo sapiens miR-4794 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4794
Sequence 9| UCUGGCUAUCUCACGAGACUGU |30
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1162954002 4 dbSNP
rs1349204197 5 dbSNP
rs1454714841 8 dbSNP
rs191156964 14 dbSNP
rs543526824 15 dbSNP
rs1284724491 19 dbSNP
rs945565778 19 dbSNP
Putative Targets

Gene Information
Gene Symbol ST13   
Synonyms AAG2, FAM10A1, FAM10A4, HIP, HOP, HSPABP, HSPABP1, P48, PRO0786, SNC6
Description ST13, Hsp70 interacting protein
Transcript NM_003932   
Expression
Putative miRNA Targets on ST13
3'UTR of ST13
(miRNA target sites are highlighted)		 
>ST13|NM_003932|3'UTR
   1 TGTCCTTCTGATAAATAAAGCCCTTGCTGAAGGAAAAGCAACCTAGATCACCTTATGGATGTCGCAATAATACAAACCAG
  81 TGTACCTCTGACCTTCTCATCAAGAGAGCTGGGGTGCTTTGAAGATAATCCCTACCCCTCTCCCCCAAATGCAGCTGAAG
 161 CATTTTACAGTGGTTTGCCATTAGGGTATTCATTCAGATAATGTTTTCCTACTAGGAATTACAAACTTTAAACACTTTTT
 241 AAATCTTCAAAATATTTAAAACAAATTTAAAGGGCCTGTTAATTCTTATATTTTTCTTTACTAATCATTTTGGATTTTTT
 321 TCTTTGAATTATTGGCAGGGAATATACTTATGTATGGAAGATTACTGCTCTGAGTGAAATAAAAGTTATTAGTGCGAGGC
 401 AAACATAACTCATTTGAGGATAAAGTTTGTGTTGGATATGTGGTTCCTGATGCATTTTGACTTGTCTTTTTAAATGCTTT
 481 ATCTTTTTCTTTAAAGATTTATTTCAATAAAACTAATTGGGACCACCCGTATTTCAGTAGGACCTGGGTAGGGATTGGAA
 561 GTACTTGGCAGGGCAGCAGCAATCTTGCTGTGTTTGATATAACATGCATCCTTGGGCAGGTTGCCCTTAAATCTTACACT
 641 GTGGTGAAGGGATGTTTTTTTTGTAATGCTGCAGTAGAGTTGGAGTACTTAGTTCTCTTGTTGTCCAGTATATCTAATAA
 721 GTGTTTTTCATATTATTTCCACGTAAGGGAAATAAGGTAGTACTTTTCTTTTTATATTTCTATGCTTAAAATTCTCTTTC
 801 CTAGTCAAAAATTGCCCAAATCTGTGTTTGCTTTCTGCTTGCTACATTTGTCTCCCTTACTTTTCTTGAGCTAAAGACAG
 881 GCTTTTTCCACCGGCATCATCACTGCTATCATCATTAACAGCGTAATTATACAAGCATATTTAATGCTGAGTTTAATTTA
 961 ATATGTAATACATATGGTAATTGTAGGGTAATACCCACAACAACTGTAGTTTCTTACTTGGCCAAGAGAATGCTTATTTA
1041 AGTGTTAGACTTCCATTCTGGCAAAATCTTGCCTTATCAGAAGACATTGGAAAGAGGGATTCCCTTTGGTGTTTGGTCTT
1121 CTACTTAGAAAAACCTATTGCAGTTAGTTTATCTTGTAGTATTCATCTTTGTATTCTGAAGATAAGGTTTGAATTAAATT
1201 GATACACACAGAGGGGAACCGATTTTTTTTATCCAATGTGAATTATAAATGAGATAATCCACAGTTATTCATTGTGGAGT
1281 TGTTGAGACTATGAAAGACTCATTGTCTTTGTATTCAGCTCTTAAATAGTGTAACTATATCCCCACCTCTGCTTGCTTTC
1361 TTTCCCTCCCCTCCAATGATAAAGAAAATGATAAATTTTCTGTTGTGCATTCAATTCTTATTTTAAATAAGACTAAGTAT
1441 AGGCATTGTACCTGACATTGCTACGTTTCTACCAGTGTTTCAATTTAAAGTGCTAGTGTTTAAAAACATTTTCAAGGGAT
1521 AAGGCCTTCTGTACTTTGCTTATTTGAAGAATCAGTGGTAGGAGCAGTGAAGTAAATTCTATGGAGTACATTTCTAAAAT
1601 ACCACATTTCTGAAATCATAAATAAGTTTATTCAGGTTCTAACCCTTTGCTGTACACAAGCAGACAGAAATGCATCTGTT
1681 ACATAAATGAGAAAAAGCTATTATGCTGATGGAGCATGCTTTTTAAATCCTTTAAAAACACTCACCATATAAACTTGCAT
1761 TTGAGCTTGTGTGTTCTTTTGTTAATGTGTAGAGTTCTCCTTTCTCGAAATTGCCAGTGTGTACTTGGCTTAACTCAAGA
1841 ACAGTTTCTTCTGGATTCCTTATTTGATTTATTTAACCTAATTATATTCTAATATTGCAAATATTACCATAAGTGGGTAA
1921 AAGTAAAATTCCTCTTCTGAAAATGTGTCCTGTGCTTTTAGATTTTTAAATTCCATAATATACATTCTTAATTTTCAACT
2001 CAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ugucAGAGCACUCUAUCGGUCu 5'
              |:||  || || ||||| 
Target 5' ctccTTTCTCGAAATTGCCAGt 3'
 1797 - 1818 130.00 -12.80
2 
miRNA  3' ugUCAGAGCACUCUAUCGGUcu 5'
            |||:|| | |  |:||||  
Target 5' gtAGTTTC-TTACTTGGCCAag 3'
 1006 - 1026 123.00 -12.80
3 
miRNA  3' ugUCAGAGCACUCUAUCGGUcu 5'
            | |||| |    |||:||  
Target 5' aaATTCTC-TTTCCTAGTCAaa 3'
 789 - 809 111.00 -5.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26560231 3 COSMIC
COSN31486591 29 COSMIC
COSN31485120 32 COSMIC
COSN30179332 41 COSMIC
COSN31593094 67 COSMIC
COSN20121462 89 COSMIC
COSN30487493 93 COSMIC
COSN31610123 171 COSMIC
COSN31543307 395 COSMIC
COSN31491005 396 COSMIC
COSN26669034 451 COSMIC
COSN26669856 471 COSMIC
COSN31523875 501 COSMIC
COSN31488235 519 COSMIC
COSN26646267 528 COSMIC
COSN26668155 561 COSMIC
COSN31539795 619 COSMIC
COSN5858971 652 COSMIC
COSN31589889 681 COSMIC
COSN28003062 1222 COSMIC
COSN9166285 1359 COSMIC
COSN16608749 1730 COSMIC
COSN16304210 1761 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs12373981 3 dbSNP
rs1325334826 4 dbSNP
rs754709867 8 dbSNP
rs1323498063 13 dbSNP
rs139004215 15 dbSNP
rs1382430306 17 dbSNP
rs769083328 20 dbSNP
rs1246948482 23 dbSNP
rs765974812 25 dbSNP
rs1372290586 26 dbSNP
rs534991835 32 dbSNP
rs934026526 34 dbSNP
rs1331141340 38 dbSNP
rs750085667 39 dbSNP
rs761288465 42 dbSNP
rs776086414 46 dbSNP
rs1466804948 49 dbSNP
rs1423173116 55 dbSNP
rs975491044 56 dbSNP
rs1261525715 59 dbSNP
rs145131177 63 dbSNP
rs984260497 65 dbSNP
rs555820690 67 dbSNP
rs1428147612 79 dbSNP
rs12373983 80 dbSNP
rs12373980 81 dbSNP
rs1417417364 87 dbSNP
rs1195967038 88 dbSNP
rs770708625 98 dbSNP
rs1026354559 101 dbSNP
rs536104237 106 dbSNP
rs1221451030 111 dbSNP
rs142954064 123 dbSNP
rs1267004188 133 dbSNP
rs1231369041 134 dbSNP
rs1271406559 142 dbSNP
rs1318783505 148 dbSNP
rs11704863 155 dbSNP
rs550461391 161 dbSNP
rs532460208 162 dbSNP
rs1306591868 177 dbSNP
rs1485105566 178 dbSNP
rs1202476691 196 dbSNP
rs569974319 197 dbSNP
rs1475200100 198 dbSNP
rs1186398975 203 dbSNP
rs1413584306 211 dbSNP
rs1275701909 218 dbSNP
rs1157938356 226 dbSNP
rs1219990069 229 dbSNP
rs1063981 234 dbSNP
rs1467393750 235 dbSNP
rs1341647079 241 dbSNP
rs1283274018 248 dbSNP
rs1403653379 250 dbSNP
rs1032061406 252 dbSNP
rs999770404 258 dbSNP
rs902343294 264 dbSNP
rs1224354484 268 dbSNP
rs12373982 275 dbSNP
rs1461629156 289 dbSNP
rs1342355191 291 dbSNP
rs1315427573 292 dbSNP
rs933241955 296 dbSNP
rs1172875591 297 dbSNP
rs1466272225 307 dbSNP
rs1424228788 320 dbSNP
rs1198522560 322 dbSNP
rs900392502 322 dbSNP
rs1405155848 323 dbSNP
rs1434596180 332 dbSNP
rs1039690514 334 dbSNP
rs1173845481 334 dbSNP
rs1432583058 342 dbSNP
rs1309790392 343 dbSNP
rs942669218 343 dbSNP
rs1431371705 347 dbSNP
rs765161156 351 dbSNP
rs12373978 352 dbSNP
rs1236818932 354 dbSNP
rs1304389953 360 dbSNP
rs1347633267 361 dbSNP
rs1232471097 363 dbSNP
rs984167255 370 dbSNP
rs571187981 372 dbSNP
rs548476101 387 dbSNP
rs189969667 392 dbSNP
rs918749858 395 dbSNP
rs528067864 396 dbSNP
rs760662641 408 dbSNP
rs1169501481 416 dbSNP
rs184648677 420 dbSNP
rs1409353180 422 dbSNP
rs1168194511 425 dbSNP
rs542713527 428 dbSNP
rs971022895 429 dbSNP
rs1314489921 433 dbSNP
rs1443130754 442 dbSNP
rs34830463 443 dbSNP
rs71200619 443 dbSNP
rs71328753 443 dbSNP
rs1370436714 453 dbSNP
rs530484302 465 dbSNP
rs1438974291 470 dbSNP
rs916806309 472 dbSNP
rs1391224767 502 dbSNP
rs990493915 506 dbSNP
rs957654376 507 dbSNP
rs1032135907 513 dbSNP
rs1336328632 517 dbSNP
rs1213704051 518 dbSNP
rs1271985254 528 dbSNP
rs999277137 528 dbSNP
rs563924743 529 dbSNP
rs1464438602 538 dbSNP
rs1474936475 539 dbSNP
rs1379347941 542 dbSNP
rs1463078746 547 dbSNP
rs545241573 550 dbSNP
rs1176481740 555 dbSNP
rs1393810166 564 dbSNP
rs1418352994 567 dbSNP
rs148221479 574 dbSNP
rs1327415083 575 dbSNP
rs1430390717 576 dbSNP
rs771982076 577 dbSNP
rs554775987 582 dbSNP
rs1357988104 587 dbSNP
rs1234425755 590 dbSNP
rs997727386 591 dbSNP
rs747897014 596 dbSNP
rs541475590 597 dbSNP
rs1206559506 600 dbSNP
rs1038885566 611 dbSNP
rs574079193 612 dbSNP
rs778277005 615 dbSNP
rs1457960318 622 dbSNP
rs192856570 626 dbSNP
rs1198282982 630 dbSNP
rs1347721355 633 dbSNP
rs888438579 646 dbSNP
rs190049341 649 dbSNP
rs185113649 651 dbSNP
rs1471825138 663 dbSNP
rs1160532043 667 dbSNP
rs1385859236 677 dbSNP
rs1351885527 684 dbSNP
rs192500202 692 dbSNP
rs1296802624 694 dbSNP
rs1377632840 695 dbSNP
rs1286351668 697 dbSNP
rs918643752 700 dbSNP
rs1240486491 707 dbSNP
rs1046573625 710 dbSNP
rs770019372 714 dbSNP
rs1221702466 717 dbSNP
rs1282260293 732 dbSNP
rs1485854787 734 dbSNP
rs949551050 739 dbSNP
rs916837542 742 dbSNP
rs1440776043 743 dbSNP
rs1184162877 745 dbSNP
rs1364447416 749 dbSNP
rs1469865193 764 dbSNP
rs143058803 774 dbSNP
rs1397304273 780 dbSNP
rs571249049 782 dbSNP
rs546488186 793 dbSNP
rs1400606348 801 dbSNP
rs534560245 804 dbSNP
rs1393640926 811 dbSNP
rs924929946 812 dbSNP
rs1334636928 831 dbSNP
rs1439619726 840 dbSNP
rs373527267 842 dbSNP
rs772433609 844 dbSNP
rs978271873 859 dbSNP
rs1348342625 860 dbSNP
rs1303416861 863 dbSNP
rs149037812 873 dbSNP
rs1341463732 876 dbSNP
rs966497571 892 dbSNP
rs1030459201 893 dbSNP
rs1437277293 896 dbSNP
rs1177024260 903 dbSNP
rs997360498 910 dbSNP
rs964511116 917 dbSNP
rs1173477741 918 dbSNP
rs548670420 922 dbSNP
rs530654857 923 dbSNP
rs1168966058 932 dbSNP
rs1395176399 933 dbSNP
rs1463555193 936 dbSNP
rs1327508211 938 dbSNP
rs1017508479 940 dbSNP
rs1439695945 944 dbSNP
rs1298990392 946 dbSNP
rs1006081477 951 dbSNP
rs888471165 965 dbSNP
rs563212117 975 dbSNP
rs1228107117 976 dbSNP
rs1048408659 983 dbSNP
rs551983668 987 dbSNP
rs994547311 999 dbSNP
rs1443703445 1000 dbSNP
rs1256256295 1003 dbSNP
rs1275117134 1005 dbSNP
rs566279357 1005 dbSNP
rs1469119188 1008 dbSNP
rs897246793 1009 dbSNP
rs1265755544 1010 dbSNP
rs1430621895 1027 dbSNP
rs1194536927 1028 dbSNP
rs1046880776 1031 dbSNP
rs949573258 1037 dbSNP
rs916743806 1058 dbSNP
rs1394554100 1065 dbSNP
rs1460636466 1077 dbSNP
rs533554614 1079 dbSNP
rs1055414847 1086 dbSNP
rs1282709612 1094 dbSNP
rs936891444 1096 dbSNP
rs1247066033 1097 dbSNP
rs925494238 1098 dbSNP
rs977790739 1104 dbSNP
rs560135962 1110 dbSNP
rs1235046272 1114 dbSNP
rs1294985976 1120 dbSNP
rs1335514434 1121 dbSNP
rs1399272407 1125 dbSNP
rs1487057717 1137 dbSNP
rs1206161138 1138 dbSNP
rs746100446 1162 dbSNP
rs541747934 1164 dbSNP
rs1261453116 1167 dbSNP
rs923082975 1168 dbSNP
rs1358603252 1174 dbSNP
rs976229262 1182 dbSNP
rs556622032 1190 dbSNP
rs1474568434 1192 dbSNP
rs1420152917 1202 dbSNP
rs1017373111 1205 dbSNP
rs757366972 1211 dbSNP
rs951977084 1211 dbSNP
rs1288126357 1212 dbSNP
rs747510275 1213 dbSNP
rs1026615983 1214 dbSNP
rs547558525 1220 dbSNP
rs1313368151 1221 dbSNP
rs1368494612 1223 dbSNP
rs144879539 1224 dbSNP
rs1227748045 1226 dbSNP
rs1477113860 1230 dbSNP
rs1025092438 1231 dbSNP
rs1285808951 1231 dbSNP
rs897146143 1231 dbSNP
rs1487491833 1233 dbSNP
rs1213673397 1234 dbSNP
rs1013665264 1236 dbSNP
rs1485059572 1241 dbSNP
rs1179672306 1249 dbSNP
rs562129405 1251 dbSNP
rs543431567 1254 dbSNP
rs895342044 1257 dbSNP
rs1157877114 1261 dbSNP
rs1378284438 1262 dbSNP
rs1055321232 1264 dbSNP
rs1174192385 1268 dbSNP
rs1288184133 1269 dbSNP
rs1445714432 1278 dbSNP
rs1211820150 1286 dbSNP
rs1357348736 1290 dbSNP
rs936786375 1291 dbSNP
rs904106231 1292 dbSNP
rs1216920733 1303 dbSNP
rs748847641 1305 dbSNP
rs1280085886 1307 dbSNP
rs1400555508 1313 dbSNP
rs576515768 1335 dbSNP
rs1480650693 1337 dbSNP
rs945095416 1341 dbSNP
rs975827663 1342 dbSNP
rs1321374481 1345 dbSNP
rs557962106 1359 dbSNP
rs1187743328 1360 dbSNP
rs1412728724 1363 dbSNP
rs1391061189 1373 dbSNP
rs1356380713 1376 dbSNP
rs1169303780 1384 dbSNP
rs1330941952 1388 dbSNP
rs910273030 1396 dbSNP
rs187731342 1407 dbSNP
rs779776125 1409 dbSNP
rs1463665658 1417 dbSNP
rs1426393580 1418 dbSNP
rs771464645 1421 dbSNP
rs1443358052 1436 dbSNP
rs1367301282 1440 dbSNP
rs1478006004 1440 dbSNP
rs577421244 1445 dbSNP
rs1201529401 1459 dbSNP
rs1275661304 1463 dbSNP
rs1307581939 1464 dbSNP
rs1452375213 1473 dbSNP
rs1250164281 1474 dbSNP
rs1026271341 1483 dbSNP
rs1255595804 1491 dbSNP
rs1469574913 1492 dbSNP
rs972385518 1496 dbSNP
rs1245946464 1497 dbSNP
rs961431488 1498 dbSNP
rs1188222610 1501 dbSNP
rs1420062330 1502 dbSNP
rs1196818592 1516 dbSNP
rs1170130987 1518 dbSNP
rs1398171228 1519 dbSNP
rs1463245150 1527 dbSNP
rs749367980 1537 dbSNP
rs1025380489 1544 dbSNP
rs1320024087 1552 dbSNP
rs1272433244 1553 dbSNP
rs777976734 1562 dbSNP
rs1258804613 1563 dbSNP
rs1275802426 1571 dbSNP
rs895236920 1581 dbSNP
rs1033722642 1582 dbSNP
rs552710540 1590 dbSNP
rs1449661008 1594 dbSNP
rs1344242973 1602 dbSNP
rs1272832034 1604 dbSNP
rs1438391904 1615 dbSNP
rs1191372778 1616 dbSNP
rs1421611313 1625 dbSNP
rs1331320108 1631 dbSNP
rs1476199378 1633 dbSNP
rs1164063708 1637 dbSNP
rs1330328911 1638 dbSNP
rs1403802710 1643 dbSNP
rs1001071224 1651 dbSNP
rs904009648 1672 dbSNP
rs1444140752 1673 dbSNP
rs534623242 1680 dbSNP
rs532669219 1682 dbSNP
rs1296838039 1683 dbSNP
rs1356835528 1693 dbSNP
rs1170798179 1700 dbSNP
rs1283087283 1701 dbSNP
rs376218603 1703 dbSNP
rs535969412 1703 dbSNP
rs902069971 1704 dbSNP
rs1174676589 1713 dbSNP
rs1040029158 1716 dbSNP
rs1478595709 1746 dbSNP
rs1237972157 1747 dbSNP
rs1214386514 1749 dbSNP
rs1259454998 1758 dbSNP
rs369794843 1764 dbSNP
rs1459287070 1773 dbSNP
rs1238813250 1777 dbSNP
rs375224936 1780 dbSNP
rs5758098 1786 dbSNP
rs910306020 1789 dbSNP
rs1381342950 1792 dbSNP
rs1048795781 1798 dbSNP
rs569771493 1806 dbSNP
rs551495768 1807 dbSNP
rs1397111814 1817 dbSNP
rs533010740 1824 dbSNP
rs1345382423 1834 dbSNP
rs1023600395 1836 dbSNP
rs919073390 1837 dbSNP
rs972033421 1840 dbSNP
rs567785543 1844 dbSNP
rs566284964 1854 dbSNP
rs17002190 1855 dbSNP
rs78265772 1858 dbSNP
rs971731305 1862 dbSNP
rs1348565487 1866 dbSNP
rs1199775726 1867 dbSNP
rs1184270715 1871 dbSNP
rs565133437 1871 dbSNP
rs1238952787 1882 dbSNP
rs5758097 1889 dbSNP
rs992169896 1891 dbSNP
rs547975476 1894 dbSNP
rs529611830 1896 dbSNP
rs112749715 1899 dbSNP
rs1172462862 1900 dbSNP
rs1399460024 1909 dbSNP
rs1411097128 1931 dbSNP
rs1331613832 1934 dbSNP
rs1357917307 1940 dbSNP
rs1000934216 1947 dbSNP
rs1444105793 1951 dbSNP
rs79763422 1954 dbSNP
rs1021554753 1962 dbSNP
rs900154088 1968 dbSNP
rs902095058 1968 dbSNP
rs900446214 1975 dbSNP
rs1342971192 1977 dbSNP
rs182316845 1981 dbSNP
rs1258784755 1985 dbSNP
rs1457525115 1989 dbSNP
rs1441749419 1997 dbSNP
rs531606599 2001 dbSNP
rs1008695435 2003 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 6767.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ugucagagcacucuAUCGGUCu 5'
                        ||||||| 
Target 5' aaaaauacaaaaacUAGCCAGg 3'
 		6 - 27
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000216218.3 | 3UTR | CUACUAAAAAUACAAAAACUAGCCAGGCAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
110 hsa-miR-4794 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059821 EFNA1 ephrin A1 2 2
MIRT203153 BACH1 BTB domain and CNC homolog 1 2 2
MIRT334253 SERPINH1 serpin family H member 1 2 2
MIRT475239 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 2
MIRT482467 ADAR adenosine deaminase, RNA specific 2 4
MIRT482632 AAR2 AAR2 splicing factor homolog 2 2
MIRT511147 MRPL17 mitochondrial ribosomal protein L17 2 4
MIRT514416 RSL1D1 ribosomal L1 domain containing 1 2 2
MIRT514842 LYRM7 LYR motif containing 7 2 4
MIRT515343 CXorf36 chromosome X open reading frame 36 2 2
MIRT515806 ALOX5AP arachidonate 5-lipoxygenase activating protein 2 2
MIRT516396 NPR1 natriuretic peptide receptor 1 2 4
MIRT516622 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT516959 SLC35F6 solute carrier family 35 member F6 2 2
MIRT517154 VHLL VHL like 2 2
MIRT517268 NRIP2 nuclear receptor interacting protein 2 2 2
MIRT517660 TRIM72 tripartite motif containing 72 2 4
MIRT518026 ABHD15 abhydrolase domain containing 15 2 2
MIRT518116 RNMTL1 mitochondrial rRNA methyltransferase 3 2 4
MIRT518143 C15orf40 chromosome 15 open reading frame 40 2 4
MIRT518232 C7orf55 formation of mitochondrial complex V assembly factor 1 homolog 2 2
MIRT518517 CASP10 caspase 10 2 2
MIRT518646 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT519287 SPCS1 signal peptidase complex subunit 1 2 2
MIRT519487 PNPLA3 patatin like phospholipase domain containing 3 2 2
MIRT520917 ST13 ST13, Hsp70 interacting protein 2 2
MIRT520928 SSBP2 single stranded DNA binding protein 2 2 2
MIRT521966 PHAX phosphorylated adaptor for RNA export 2 4
MIRT522244 NPFFR1 neuropeptide FF receptor 1 2 2
MIRT523355 GTF3C6 general transcription factor IIIC subunit 6 2 2
MIRT525181 ZNF468 zinc finger protein 468 2 2
MIRT528221 METTL8 methyltransferase like 8 2 2
MIRT528437 COL9A2 collagen type IX alpha 2 chain 2 2
MIRT531504 NONO non-POU domain containing octamer binding 2 2
MIRT532597 SIX4 SIX homeobox 4 2 2
MIRT532761 LDHD lactate dehydrogenase D 2 2
MIRT536012 MECP2 methyl-CpG binding protein 2 2 2
MIRT536262 LPGAT1 lysophosphatidylglycerol acyltransferase 1 2 2
MIRT547555 LRRC58 leucine rich repeat containing 58 2 2
MIRT554691 RNF2 ring finger protein 2 2 2
MIRT557250 CRAMP1L cramped chromatin regulator homolog 1 2 2
MIRT563339 RPLP0 ribosomal protein lateral stalk subunit P0 2 2
MIRT573179 P2RX3 purinergic receptor P2X 3 2 2
MIRT574386 UBE2N ubiquitin conjugating enzyme E2 N 2 2
MIRT574638 LPCAT3 lysophosphatidylcholine acyltransferase 3 2 2
MIRT609143 ZNF610 zinc finger protein 610 2 4
MIRT609651 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT610846 ZNF44 zinc finger protein 44 2 2
MIRT612345 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT613002 GATA6 GATA binding protein 6 2 2
MIRT614095 PDE4C phosphodiesterase 4C 2 2
MIRT615512 AGTRAP angiotensin II receptor associated protein 2 2
MIRT621281 PIWIL1 piwi like RNA-mediated gene silencing 1 2 2
MIRT623367 LUC7L2 LUC7 like 2, pre-mRNA splicing factor 2 2
MIRT624508 C7orf55-LUC7L2 C7orf55-LUC7L2 readthrough 2 2
MIRT632570 POLQ DNA polymerase theta 2 2
MIRT634829 ARHGEF39 Rho guanine nucleotide exchange factor 39 2 2
MIRT639452 CTNNBL1 catenin beta like 1 2 2
MIRT642097 FBXL2 F-box and leucine rich repeat protein 2 2 2
MIRT648408 TRMT10B tRNA methyltransferase 10B 2 2
MIRT653936 SERPINC1 serpin family C member 1 2 2
MIRT658226 FBXL16 F-box and leucine rich repeat protein 16 2 2
MIRT662599 MAGEB4 MAGE family member B4 2 2
MIRT663190 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT664623 DNPEP aspartyl aminopeptidase 2 2
MIRT671879 ZNF429 zinc finger protein 429 2 2
MIRT679033 ZNF419 zinc finger protein 419 2 2
MIRT684892 ZSCAN22 zinc finger and SCAN domain containing 22 2 2
MIRT685153 DTWD2 DTW domain containing 2 2 2
MIRT686415 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT687021 RNF24 ring finger protein 24 2 2
MIRT688369 ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 2 2
MIRT689600 FAM96A family with sequence similarity 96 member A 2 2
MIRT690375 ZSWIM7 zinc finger SWIM-type containing 7 2 2
MIRT690484 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT691458 C21orf58 chromosome 21 open reading frame 58 2 2
MIRT691861 ZNF552 zinc finger protein 552 2 2
MIRT692035 ARSK arylsulfatase family member K 2 2
MIRT693951 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT694058 NQO2 N-ribosyldihydronicotinamide:quinone reductase 2 2 2
MIRT694469 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT695028 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT695093 CHRNB1 cholinergic receptor nicotinic beta 1 subunit 2 2
MIRT696624 WDR77 WD repeat domain 77 2 2
MIRT697446 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT697871 UBE2D3 ubiquitin conjugating enzyme E2 D3 2 2
MIRT700637 PQLC2 PQ loop repeat containing 2 2 2
MIRT701192 OTUD3 OTU deubiquitinase 3 2 2
MIRT701332 NSD1 nuclear receptor binding SET domain protein 1 2 2
MIRT702199 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT702891 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT704389 CTSS cathepsin S 2 2
MIRT704922 CCDC36 coiled-coil domain containing 36 2 2
MIRT705770 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT705797 ALDH6A1 aldehyde dehydrogenase 6 family member A1 2 2
MIRT705874 AEN apoptosis enhancing nuclease 2 2
MIRT707372 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT707426 RRP7A ribosomal RNA processing 7 homolog A 2 2
MIRT710293 SPN sialophorin 2 2
MIRT710744 ZNF71 zinc finger protein 71 2 2
MIRT713183 ERO1L endoplasmic reticulum oxidoreductase 1 alpha 1 1
MIRT715030 RANBP6 RAN binding protein 6 2 2
MIRT715829 ZNF598 zinc finger protein 598 2 2
MIRT720340 BACE2 beta-site APP-cleaving enzyme 2 2 2
MIRT722662 VKORC1L1 vitamin K epoxide reductase complex subunit 1 like 1 2 2
MIRT722683 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT723908 PEX11A peroxisomal biogenesis factor 11 alpha 2 2
MIRT724044 SMIM14 small integral membrane protein 14 2 2
MIRT725241 PDE1B phosphodiesterase 1B 2 2
MIRT725307 NLRC5 NLR family CARD domain containing 5 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4794 Doxorubicin 31703 NSC123127 approved resistant High Triple-Negative Breast Cancer cell line (MDA-MB-231, MDA-MB-468)
hsa-miR-4794 Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-4794 Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (100 ng/ml)
hsa-miR-4794 Gemcitabine 60750 NSC613327 approved sensitive cell line (Panc1-GR4)

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