pre-miRNA Information
pre-miRNA hsa-mir-921   
Genomic Coordinates chr1: 166154743 - 166154798
Synonyms MIRN921, hsa-mir-921, MIR921
Description Homo sapiens miR-921 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-921
Sequence 2| CUAGUGAGGGACAGAACCAGGAUUC |26
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN31549221 11 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1464259216 3 dbSNP
rs768428855 8 dbSNP
rs746970999 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol RDX   
Synonyms DFNB24
Description radixin
Transcript NM_002906   
Expression
Putative miRNA Targets on RDX
3'UTR of RDX
(miRNA target sites are highlighted)
>RDX|NM_002906|3'UTR
   1 GAGCTGTTATTTTGCATATATGTTCTTCATAAGCTGAACCACCAACAGAGAAAAGCAGGCCTTTGCAGATATGATGGAAT
  81 GCATCCCACCTTGCCAAAGCACTTACACCAGTTTGACTGTGCTAGCTAAAAGACAAATTTAAGGGGAGCTCTTCAACATT
 161 AAGGCAGTATGATATCATGCTTGGTTTTCTTTTTTCTTTTGGTCCAGGGAATGGAGAATGGTGTTCCATTGCCTCTTTTC
 241 ACATTTTTTTTCTTTTTCTTTTTTTTTTCTGTTGAAGATTAACACTAATTATCACGTCTGACAAATGTGTATGTGTGGTT
 321 TCAGTTCTGTGTACATTTTAAAGGATAATGGTGAACATTTTAATGGGTTTCCCTTGCCCTTTCCATATTTAACCTATTTC
 401 CACATTCTCTCTCACTCACATTTTCTCAGTGTGCCCTTCTCTTATCTGCCATGTCCATAGCCATAATTCCACCATCATAC
 481 AGATCAGGCAGTGTTTAAAATGATGGTAGGTAGCACAGTGGACAGTCTTTGATCATCATGTAGAATATGGCTATGAATCA
 561 GGAAAGAGATTAGAACATTTAATAATGTATGTACAGCTGGTGCTTAGTTTTTTTTTAATCTAAATTTAATTACCTTATTG
 641 GATATTTGATATTTGGTTATTTAATCACAGTCATCTTTAACAGCTTACACTGATTGGTGTTTTATCTCCTGTGATCCTTT
 721 GATGGCTTTTTTTGCCTACCATTTCACAGAGGTTTAGACAGCAGTAGTAGCTCCCTAGGAGAGTTTACTGATGAAACAGC
 801 CTCTGCAAGATTTTAAAAGTTTTGTTCTTTTATAGACTGATTTAGAAAAACAAATGATTAGTTAAAAAAAGAAAATATAC
 881 ATTTGTTGGTAACTAATGTTATTTTTTAAAACCTGGACCTTTTCTGGAAGGGCAGCATATAAAAACATCAGTCCCGAGGA
 961 GGGGACAACAATACTACCTCACTACTACATCTGTGATGACTGGTTGTTCAAACACAATGGAGTGTGTAAGGTATATGTTT
1041 TATAATTCATAACCATAGCCTCGATCATCAAGAAATACTTTCGAAATTTCATTTTCCTTCAGAATATCTTAAGAGTGCTA
1121 AATTTTTAACTGCCTTTTTGTCGAGTCAAACTGTGGGATTCTGATTTGTATTAAAATTGTAAGCTCCTCACTGGTATACT
1201 ATCATCCTGGAGGGGTGTTGTATGGCTGAGCAAGAGAGAGAGAGAATGAGAGAGAGACTGTGTGTGTGTGTGTGTGTGTG
1281 TGTGTGTGTACTCTGTGTGTGTATGAGAGAGAGAAATGCTAACCTTGTAGCATGTGAAGAATGTCTGTACCTTGATACGA
1361 TAGTTACATAATCAGTATATTTGGTTTCTAGATCACTGTGCTTATTTTGTTTCAATCTCTGACTAAAAATACTTAAATTT
1441 GGTTTGTTAATTCTTATTTTAGAAATTATAATTTTAGTTTATATTAATTTCGGTTATAGCTTACTGAAGAAATCTTTCCA
1521 GTTAGAAGGAGGTTCTAATATTCACATGTTCTAATACTTTGTTTATTGTAAAACAGCTAAATTTGGAGATACGTAAAGCC
1601 TTGTTTTCTCTGTGTGGTTCAGCTACTTTCCATTTGGTATTACACAGTCAAATTTACATTTATCTATTAAAATTGCCATT
1681 TTATTAAACATTTTCATGCACAGTAGATTCAAGTTGTGTCTGAAAATATCTCTTGTGCTTTTTTGATTTTGCTGACTTTA
1761 AAAGGATTAATCTGGGCAGACATTATGTAAAAGAAAGGTTGCGTTTAATATATTTTTTGAACTTTGTAGGACAAAACATA
1841 GCTGGTTAACCTTGAAGTGACTGTTGTACCATGGTTGTGCACATGCTTCAGAATCCTATGGAAGAGAATATTCCTACTTG
1921 CAGTACATCAAAGGAATGGATGGTGGACCCTACTATTCATGTTTTGAGACATAAATGTTCACTTTAAAGCAATTGCATAA
2001 TAGATAAAAACCTGAACTTTCATTGGATTTTTGTTAATTTTCCTCATTTTGAATTATGTGCACTACCATAGCTACATCAG
2081 TTTGATACAGTATTGAAAAATTATCAGTTATATTTTGCTGTTTATGATCTATTTGTAGATTAGGATTAAAATGGATTTAA
2161 TCCATTTTTAAGGCTGTGTGAATTTTTCTAAACAAGAACCATTTGCAATATGGATTTCTTAGAGATTAAACCAATTATAA
2241 CTTATTAGCAGTCGCGAGCACATGTTCATATAGTCAATGTAAAAATACACTAATGAGTATTTGGTAAATCCCAGTAGGCT
2321 TTTACCATTAGCATAATTTTGTGTTGTACAATTAAGTTACAATTACATCTCTAATTTTGGATAATATTCATTGGTTAACA
2401 ATAAAGTGACAAAAGCTCATGCCTTCAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cuuaggaccaagacAGGGAGUGAUc 5'
                        | |||||||| 
Target 5' ggggacaacaatacTACCTCACTAc 3'
961 - 985 147.00 -11.30
2
miRNA  3' cuUAGGACCAAGACAGGGAGUGAUc 5'
            ||::|| |||  ||:|| |||| 
Target 5' ttATTTTGTTTCAATCTCTGACTAa 3'
1402 - 1426 147.00 -13.90
3
miRNA  3' cuUAGGACCAAG-----ACAGGGAGUGAuc 5'
            | |||  |||     | ||:||||||  
Target 5' ttAACCTATTTCCACATTCTCTCTCACTca 3'
389 - 418 143.00 -13.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
302341 79 ClinVar
302340 156 ClinVar
878215 302 ClinVar
878214 414 ClinVar
302339 429 ClinVar
302338 463 ClinVar
878213 474 ClinVar
302337 525 ClinVar
302336 725 ClinVar
877178 740 ClinVar
877177 762 ClinVar
302335 800 ClinVar
877176 855 ClinVar
302334 885 ClinVar
302333 924 ClinVar
302332 1058 ClinVar
302331 1083 ClinVar
877175 1143 ClinVar
302330 1173 ClinVar
879969 1201 ClinVar
879968 1215 ClinVar
302328 1246 ClinVar
302329 1246 ClinVar
302327 1251 ClinVar
302326 1258 ClinVar
302325 1264 ClinVar
879967 1264 ClinVar
302324 1284 ClinVar
302323 1288 ClinVar
302315 1290 ClinVar
302316 1290 ClinVar
302317 1290 ClinVar
302318 1290 ClinVar
302319 1290 ClinVar
302320 1290 ClinVar
302321 1290 ClinVar
302322 1290 ClinVar
302312 1291 ClinVar
302313 1291 ClinVar
302314 1291 ClinVar
302309 1292 ClinVar
302310 1292 ClinVar
302311 1292 ClinVar
302308 1313 ClinVar
302307 1315 ClinVar
879612 1358 ClinVar
302306 1368 ClinVar
879611 1375 ClinVar
879610 1383 ClinVar
879609 1536 ClinVar
302305 1579 ClinVar
879608 1632 ClinVar
879607 1898 ClinVar
302304 1955 ClinVar
302303 1961 ClinVar
302302 2006 ClinVar
302301 2057 ClinVar
878149 2070 ClinVar
878148 2085 ClinVar
878147 2112 ClinVar
878146 2253 ClinVar
302300 2423 ClinVar
COSN30499278 44 COSMIC
COSN31558414 53 COSMIC
COSN30513666 73 COSMIC
COSN30110206 102 COSMIC
COSN26556994 106 COSMIC
COSN31505729 171 COSMIC
COSN30542805 174 COSMIC
COSN31515169 176 COSMIC
COSN31549739 201 COSMIC
COSN31519138 871 COSMIC
COSN20108734 920 COSMIC
COSN31519141 994 COSMIC
COSN31520253 1072 COSMIC
COSN15958193 1082 COSMIC
COSN31528043 1083 COSMIC
COSN31579662 1097 COSMIC
COSN31594675 1135 COSMIC
COSN26504913 1142 COSMIC
COSN31603315 1232 COSMIC
COSN6984878 1293 COSMIC
COSN20230674 1304 COSMIC
COSN31606935 1793 COSMIC
COSN31484031 1841 COSMIC
COSN26636970 1850 COSMIC
COSN31547980 2007 COSMIC
COSN31518385 2154 COSMIC
COSN26559599 2162 COSMIC
COSN31544835 2224 COSMIC
COSN4718688 2228 COSMIC
COSN17037735 2232 COSMIC
COSN32058582 2253 COSMIC
COSN31545261 2255 COSMIC
COSN30176983 2418 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs777439092 2 dbSNP
rs1409799137 4 dbSNP
rs375311118 5 dbSNP
rs752431465 10 dbSNP
rs767229138 15 dbSNP
rs1014659243 16 dbSNP
rs1313480998 18 dbSNP
rs1333696815 21 dbSNP
rs1004658030 24 dbSNP
rs754563078 29 dbSNP
rs752353543 30 dbSNP
rs750839939 41 dbSNP
rs765513561 51 dbSNP
rs1442398985 55 dbSNP
rs1466379081 71 dbSNP
rs377557089 72 dbSNP
rs55953813 79 dbSNP
rs1293011955 83 dbSNP
rs996119078 97 dbSNP
rs1194648658 106 dbSNP
rs1171503884 108 dbSNP
rs759401700 110 dbSNP
rs1438467077 111 dbSNP
rs11541502 116 dbSNP
rs1433162069 119 dbSNP
rs1394702926 120 dbSNP
rs548988204 121 dbSNP
rs1444289745 128 dbSNP
rs1182716630 132 dbSNP
rs1181141463 134 dbSNP
rs1459328413 136 dbSNP
rs186249296 156 dbSNP
rs1000903738 161 dbSNP
rs1410067535 166 dbSNP
rs902588989 169 dbSNP
rs1042520656 172 dbSNP
rs1451554409 176 dbSNP
rs949509069 182 dbSNP
rs1177097628 190 dbSNP
rs1385450792 196 dbSNP
rs1225787178 197 dbSNP
rs770941392 202 dbSNP
rs1340096595 206 dbSNP
rs1055751233 209 dbSNP
rs1261382733 214 dbSNP
rs1282972485 215 dbSNP
rs1461034118 216 dbSNP
rs1204562635 235 dbSNP
rs1209158940 239 dbSNP
rs1190877397 252 dbSNP
rs532505138 252 dbSNP
rs560083718 252 dbSNP
rs759550917 254 dbSNP
rs1346784664 258 dbSNP
rs1403342038 259 dbSNP
rs973084492 259 dbSNP
rs1286198951 264 dbSNP
rs1336983020 269 dbSNP
rs1380904250 269 dbSNP
rs1404748703 269 dbSNP
rs1318128529 272 dbSNP
rs1327497977 277 dbSNP
rs1230342182 278 dbSNP
rs963042023 284 dbSNP
rs551505568 286 dbSNP
rs1224314040 287 dbSNP
rs760508274 295 dbSNP
rs1396589566 296 dbSNP
rs181457865 302 dbSNP
rs1260869069 306 dbSNP
rs983181176 318 dbSNP
rs1357277556 338 dbSNP
rs190627175 343 dbSNP
rs1413873470 344 dbSNP
rs544220930 345 dbSNP
rs996454744 347 dbSNP
rs1455440858 363 dbSNP
rs1378979871 373 dbSNP
rs1362175471 380 dbSNP
rs964652395 396 dbSNP
rs1386204343 413 dbSNP
rs1032703901 420 dbSNP
rs1000851378 422 dbSNP
rs902536061 425 dbSNP
rs146390813 429 dbSNP
rs1186255744 430 dbSNP
rs1485514057 431 dbSNP
rs1238681401 439 dbSNP
rs1259873411 444 dbSNP
rs562078184 445 dbSNP
rs1351132723 447 dbSNP
rs1218648761 448 dbSNP
rs1013684855 453 dbSNP
rs1263480698 456 dbSNP
rs896607487 457 dbSNP
rs886047645 463 dbSNP
rs1055295598 472 dbSNP
rs1416925325 472 dbSNP
rs1364700221 491 dbSNP
rs1348076466 494 dbSNP
rs1421927625 503 dbSNP
rs1162120233 504 dbSNP
rs1259693866 506 dbSNP
rs1365476256 512 dbSNP
rs1425925720 524 dbSNP
rs144848373 525 dbSNP
rs573624635 535 dbSNP
rs1371298076 538 dbSNP
rs1390968704 545 dbSNP
rs1308010632 554 dbSNP
rs920175355 559 dbSNP
rs532278020 562 dbSNP
rs1289371678 563 dbSNP
rs1340855691 567 dbSNP
rs1320010429 571 dbSNP
rs1223210136 575 dbSNP
rs941675396 587 dbSNP
rs907558267 588 dbSNP
rs1176219361 589 dbSNP
rs1384182125 591 dbSNP
rs1250768690 601 dbSNP
rs1441208460 603 dbSNP
rs1182133382 604 dbSNP
rs983126821 610 dbSNP
rs954485692 616 dbSNP
rs1352792928 617 dbSNP
rs543545438 617 dbSNP
rs974591120 617 dbSNP
rs1420663602 619 dbSNP
rs780444817 621 dbSNP
rs1285318087 624 dbSNP
rs770101389 625 dbSNP
rs1163340109 628 dbSNP
rs1312626092 637 dbSNP
rs1381785073 645 dbSNP
rs1228746775 647 dbSNP
rs1475101595 648 dbSNP
rs1314798963 666 dbSNP
rs964927559 691 dbSNP
rs1032238223 695 dbSNP
rs1251453883 696 dbSNP
rs1000798443 703 dbSNP
rs966667779 708 dbSNP
rs1242850133 711 dbSNP
rs1462066884 714 dbSNP
rs1417962664 717 dbSNP
rs1020969342 720 dbSNP
rs1013630972 721 dbSNP
rs1195765538 721 dbSNP
rs896560772 722 dbSNP
rs1444994205 723 dbSNP
rs1468376630 724 dbSNP
rs574825897 725 dbSNP
rs1209931842 733 dbSNP
rs1405021380 739 dbSNP
rs558073403 740 dbSNP
rs776440558 741 dbSNP
rs1304415960 746 dbSNP
rs1359778335 748 dbSNP
rs1002357147 756 dbSNP
rs1319399412 762 dbSNP
rs539984720 764 dbSNP
rs781384543 765 dbSNP
rs1262141123 766 dbSNP
rs1232646426 767 dbSNP
rs1442687808 774 dbSNP
rs1038558330 781 dbSNP
rs940283235 786 dbSNP
rs886065273 795 dbSNP
rs1187626572 796 dbSNP
rs1258476778 799 dbSNP
rs886047644 800 dbSNP
rs1047381003 809 dbSNP
rs1479515199 829 dbSNP
rs1224961362 831 dbSNP
rs757837151 833 dbSNP
rs1324913339 837 dbSNP
rs933012439 844 dbSNP
rs923028819 853 dbSNP
rs752002973 855 dbSNP
rs974917892 863 dbSNP
rs185094188 864 dbSNP
rs1298769999 871 dbSNP
rs1396735091 871 dbSNP
rs1323933862 875 dbSNP
rs142279957 885 dbSNP
rs1402525173 897 dbSNP
rs1397832961 899 dbSNP
rs1170013232 912 dbSNP
rs925116477 916 dbSNP
rs35381725 924 dbSNP
rs966614405 927 dbSNP
rs1193839648 935 dbSNP
rs1020916869 940 dbSNP
rs1198786963 947 dbSNP
rs1247426535 954 dbSNP
rs1250655101 955 dbSNP
rs1175708008 956 dbSNP
rs1212505623 966 dbSNP
rs1438389144 968 dbSNP
rs537872061 971 dbSNP
rs1274942553 978 dbSNP
rs992146749 1002 dbSNP
rs778188655 1014 dbSNP
rs1193866351 1022 dbSNP
rs1338451273 1024 dbSNP
rs1301972203 1033 dbSNP
rs961014059 1035 dbSNP
rs567257716 1040 dbSNP
rs1438080531 1051 dbSNP
rs886047643 1058 dbSNP
rs1235350250 1062 dbSNP
rs1241289342 1063 dbSNP
rs1033744189 1066 dbSNP
rs1357910362 1072 dbSNP
rs1002709909 1075 dbSNP
rs1222419681 1075 dbSNP
rs1453434992 1081 dbSNP
rs746957862 1082 dbSNP
rs898627757 1082 dbSNP
rs114509945 1083 dbSNP
rs533846123 1088 dbSNP
rs1442636617 1089 dbSNP
rs759080639 1094 dbSNP
rs1440179177 1097 dbSNP
rs932980025 1098 dbSNP
rs1285123094 1100 dbSNP
rs866551189 1101 dbSNP
rs1390775295 1102 dbSNP
rs1336884067 1106 dbSNP
rs1406624369 1110 dbSNP
rs1353556830 1113 dbSNP
rs901520593 1113 dbSNP
rs1331404341 1117 dbSNP
rs1408607758 1128 dbSNP
rs566717477 1130 dbSNP
rs1381048611 1134 dbSNP
rs1245835314 1142 dbSNP
rs1285328999 1143 dbSNP
rs1359140066 1145 dbSNP
rs1038748308 1147 dbSNP
rs1272459526 1154 dbSNP
rs943116299 1156 dbSNP
rs925063839 1157 dbSNP
rs1459836883 1166 dbSNP
rs753716470 1173 dbSNP
rs1402965427 1175 dbSNP
rs551300652 1177 dbSNP
rs532933098 1184 dbSNP
rs1165638627 1185 dbSNP
rs1174635069 1192 dbSNP
rs1422309954 1193 dbSNP
rs945220103 1194 dbSNP
rs913801365 1196 dbSNP
rs181866368 1201 dbSNP
rs960709823 1203 dbSNP
rs967115079 1210 dbSNP
rs1034103027 1213 dbSNP
rs1342774754 1215 dbSNP
rs1225947880 1219 dbSNP
rs1269607062 1224 dbSNP
rs1318698996 1243 dbSNP
rs1220650403 1244 dbSNP
rs377537657 1246 dbSNP
rs886047642 1246 dbSNP
rs980837696 1246 dbSNP
rs112821905 1248 dbSNP
rs1192466055 1249 dbSNP
rs541339386 1251 dbSNP
rs1234552665 1252 dbSNP
rs1444011292 1254 dbSNP
rs1190944003 1256 dbSNP
rs1261788896 1258 dbSNP
rs867272069 1258 dbSNP
rs886047641 1258 dbSNP
rs1222483890 1259 dbSNP
rs756000998 1259 dbSNP
rs1172259771 1261 dbSNP
rs372282092 1264 dbSNP
rs778972571 1264 dbSNP
rs1017005810 1265 dbSNP
rs1426728234 1265 dbSNP
rs868358543 1265 dbSNP
rs1179521744 1269 dbSNP
rs1404819300 1272 dbSNP
rs1380963132 1274 dbSNP
rs1437130789 1279 dbSNP
rs1318284643 1280 dbSNP
rs1280840057 1281 dbSNP
rs1212752077 1282 dbSNP
rs74676538 1284 dbSNP
rs951568803 1284 dbSNP
rs1345105011 1285 dbSNP
rs201146451 1285 dbSNP
rs199826383 1286 dbSNP
rs998852823 1286 dbSNP
rs780363505 1288 dbSNP
rs1195200730 1290 dbSNP
rs1266226991 1290 dbSNP
rs1285190207 1290 dbSNP
rs1488597543 1290 dbSNP
rs375799373 1290 dbSNP
rs61030269 1290 dbSNP
rs867786685 1290 dbSNP
rs878964786 1290 dbSNP
rs879086566 1290 dbSNP
rs886047640 1290 dbSNP
rs886047637 1291 dbSNP
rs886047638 1291 dbSNP
rs886047639 1291 dbSNP
rs1351447994 1292 dbSNP
rs749108687 1292 dbSNP
rs750877967 1292 dbSNP
rs886047634 1292 dbSNP
rs886047635 1292 dbSNP
rs886047636 1292 dbSNP
rs1487892581 1293 dbSNP
rs753881085 1294 dbSNP
rs1281325820 1295 dbSNP
rs115813167 1302 dbSNP
rs1268994889 1303 dbSNP
rs1280610865 1303 dbSNP
rs1416981671 1303 dbSNP
rs140466869 1304 dbSNP
rs901471293 1308 dbSNP
rs1442014778 1309 dbSNP
rs1162255990 1312 dbSNP
rs189484152 1313 dbSNP
rs35062188 1314 dbSNP
rs1491036409 1315 dbSNP
rs149832663 1315 dbSNP
rs754712703 1315 dbSNP
rs866079192 1315 dbSNP
rs1313939360 1317 dbSNP
rs1377373475 1317 dbSNP
rs1007259613 1328 dbSNP
rs1310515697 1336 dbSNP
rs1321101443 1338 dbSNP
rs561745241 1349 dbSNP
rs1229654166 1355 dbSNP
rs766075876 1358 dbSNP
rs1172572641 1359 dbSNP
rs903592064 1367 dbSNP
rs540576204 1368 dbSNP
rs79924211 1375 dbSNP
rs1413662181 1385 dbSNP
rs1424963125 1390 dbSNP
rs1156280258 1393 dbSNP
rs913748853 1395 dbSNP
rs1470343865 1401 dbSNP
rs1465240472 1405 dbSNP
rs1171700881 1412 dbSNP
rs1400701570 1414 dbSNP
rs1056347714 1415 dbSNP
rs939265437 1417 dbSNP
rs564769645 1423 dbSNP
rs926597516 1430 dbSNP
rs115387220 1433 dbSNP
rs1258060286 1437 dbSNP
rs962711049 1441 dbSNP
rs1217580988 1453 dbSNP
rs1484540337 1453 dbSNP
rs909948421 1456 dbSNP
rs982845265 1457 dbSNP
rs951516857 1468 dbSNP
rs1237321791 1470 dbSNP
rs1209735780 1476 dbSNP
rs1483829364 1481 dbSNP
rs575888818 1491 dbSNP
rs1259700689 1493 dbSNP
rs998403942 1495 dbSNP
rs1286505635 1498 dbSNP
rs964638429 1503 dbSNP
rs1018556864 1512 dbSNP
rs1173678707 1518 dbSNP
rs796073834 1518 dbSNP
rs1358364715 1520 dbSNP
rs1466449240 1521 dbSNP
rs1304535955 1522 dbSNP
rs1338397290 1528 dbSNP
rs1398813413 1531 dbSNP
rs1278348129 1532 dbSNP
rs1222061841 1538 dbSNP
rs1007214328 1546 dbSNP
rs556332581 1548 dbSNP
rs1313189737 1560 dbSNP
rs1212801396 1570 dbSNP
rs1284480624 1571 dbSNP
rs772084374 1579 dbSNP
rs1043466848 1580 dbSNP
rs1009326088 1586 dbSNP
rs1294378359 1589 dbSNP
rs1190859984 1591 dbSNP
rs892264046 1592 dbSNP
rs1056695733 1593 dbSNP
rs939231267 1593 dbSNP
rs926516114 1594 dbSNP
rs1045010155 1595 dbSNP
rs1298206160 1599 dbSNP
rs1361899547 1601 dbSNP
rs941338723 1612 dbSNP
rs1367928751 1617 dbSNP
rs1221265438 1621 dbSNP
rs909895824 1662 dbSNP
rs1353601287 1664 dbSNP
rs1312619852 1668 dbSNP
rs982791503 1673 dbSNP
rs1449961806 1675 dbSNP
rs1431072231 1676 dbSNP
rs1346581615 1677 dbSNP
rs1174921092 1708 dbSNP
rs544319317 1713 dbSNP
rs922744652 1718 dbSNP
rs977312135 1729 dbSNP
rs1438932022 1730 dbSNP
rs1159216521 1732 dbSNP
rs754210041 1733 dbSNP
rs1403078008 1736 dbSNP
rs964267219 1753 dbSNP
rs1166958382 1759 dbSNP
rs1350105838 1760 dbSNP
rs1018918322 1764 dbSNP
rs1438245773 1771 dbSNP
rs1329657980 1781 dbSNP
rs979020599 1782 dbSNP
rs184280850 1786 dbSNP
rs1416963514 1787 dbSNP
rs1186877893 1794 dbSNP
rs1312068171 1798 dbSNP
rs1370007019 1801 dbSNP
rs181840405 1802 dbSNP
rs1486355652 1803 dbSNP
rs1290748939 1812 dbSNP
rs1243991268 1825 dbSNP
rs1196986425 1826 dbSNP
rs533746098 1830 dbSNP
rs566675319 1831 dbSNP
rs1457174560 1832 dbSNP
rs1179079019 1834 dbSNP
rs1234505547 1837 dbSNP
rs1471809643 1838 dbSNP
rs1413904773 1862 dbSNP
rs1021970715 1873 dbSNP
rs1168122304 1880 dbSNP
rs558009916 1881 dbSNP
rs1009273819 1893 dbSNP
rs539282888 1898 dbSNP
rs775679873 1900 dbSNP
rs1034802276 1904 dbSNP
rs770185484 1914 dbSNP
rs1284781881 1922 dbSNP
rs138942667 1955 dbSNP
rs550710327 1956 dbSNP
rs746061486 1961 dbSNP
rs1363656242 1985 dbSNP
rs1199036181 1989 dbSNP
rs1267997527 1997 dbSNP
rs538806036 2006 dbSNP
rs1186755976 2007 dbSNP
rs1394631951 2008 dbSNP
rs1475889341 2011 dbSNP
rs1190926083 2017 dbSNP
rs1327309452 2023 dbSNP
rs543347774 2028 dbSNP
rs1465868039 2033 dbSNP
rs771202205 2034 dbSNP
rs1459866793 2037 dbSNP
rs1393640335 2041 dbSNP
rs941285060 2056 dbSNP
rs886047633 2057 dbSNP
rs1170887065 2063 dbSNP
rs1047043222 2064 dbSNP
rs1342838556 2070 dbSNP
rs930008269 2071 dbSNP
rs1430019397 2079 dbSNP
rs747342832 2085 dbSNP
rs1184957714 2088 dbSNP
rs976881626 2089 dbSNP
rs1199710432 2092 dbSNP
rs1342651025 2092 dbSNP
rs942832359 2095 dbSNP
rs529351423 2098 dbSNP
rs978968162 2101 dbSNP
rs968956016 2102 dbSNP
rs1467576636 2104 dbSNP
rs576545515 2105 dbSNP
rs1020581251 2111 dbSNP
rs568502944 2112 dbSNP
rs1309592364 2120 dbSNP
rs1271284920 2124 dbSNP
rs956419899 2126 dbSNP
rs1173571713 2138 dbSNP
rs878912281 2141 dbSNP
rs1227282109 2152 dbSNP
rs546695734 2152 dbSNP
rs1418474488 2163 dbSNP
rs1297594057 2168 dbSNP
rs1361251727 2181 dbSNP
rs1371267942 2189 dbSNP
rs1402038632 2193 dbSNP
rs1299495700 2194 dbSNP
rs1305082698 2196 dbSNP
rs1035156590 2199 dbSNP
rs1275281706 2199 dbSNP
rs1349892554 2204 dbSNP
rs1003304038 2208 dbSNP
rs1284631678 2209 dbSNP
rs1366832360 2225 dbSNP
rs904986367 2234 dbSNP
rs1264792297 2253 dbSNP
rs796924843 2254 dbSNP
rs1352582462 2255 dbSNP
rs756622618 2256 dbSNP
rs888351599 2268 dbSNP
rs1046991685 2270 dbSNP
rs150659432 2277 dbSNP
rs901185113 2281 dbSNP
rs1395913913 2286 dbSNP
rs1390272309 2295 dbSNP
rs1195584125 2303 dbSNP
rs1041491297 2308 dbSNP
rs1267308851 2311 dbSNP
rs557049038 2312 dbSNP
rs778278496 2313 dbSNP
rs1372946381 2318 dbSNP
rs942800256 2326 dbSNP
rs1308412512 2327 dbSNP
rs1354378698 2327 dbSNP
rs911333837 2332 dbSNP
rs1263233968 2339 dbSNP
rs1355144520 2343 dbSNP
rs1178325321 2348 dbSNP
rs1481894559 2351 dbSNP
rs1456735102 2359 dbSNP
rs1178466247 2362 dbSNP
rs55805022 2370 dbSNP
rs1239312499 2379 dbSNP
rs865923054 2380 dbSNP
rs190321080 2381 dbSNP
rs1367969285 2383 dbSNP
rs913464454 2389 dbSNP
rs989078206 2393 dbSNP
rs1398433458 2409 dbSNP
rs1231588343 2411 dbSNP
rs886047632 2423 dbSNP
rs956540799 2428 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 5962.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' cuuaggaccaagacAGGGAGUGAUc 5'
                        | |||||||| 
Target 5' ----acaacaauacUACCUCACUAc 3'
1 - 21
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 5962.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' cuuaggaccaagacAGGGAGUGAUc 5'
                        | |||||||| 
Target 5' ----acaacaauacUACCUCACUAc 3'
1 - 21
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HCT116
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in ERX177599. RNA binding protein: AGO2. Condition:p53_D_AGO_CLIP_2_1 PAR-CLIP data was present in ERX177600. RNA binding protein: AGO2. Condition:p53_V_Ago_CLIP_2_2 PAR-CLIP data was present in ERX177604. RNA binding protein: AGO2. Condition:p53_V_AGO_CLIP_2_6 PAR-CLIP data was present in ERX177605. RNA binding protein: AGO2. Condition:KO_D_AGO_CLIP_2_7 PAR-CLIP data was present in ERX177610. RNA binding protein: AGO2. Condition:KO_V_AGO_CLIP_2_12 PAR-CLIP data was present in ERX177611. RNA binding protein: AGO2. Condition:p53_D_AGO_CLIP_3_1 PAR-CLIP data was present in ERX177615. RNA binding protein: AGO2. Condition:p53_D_AGO_CLIP_3_5 PAR-CLIP data was present in ERX177616. RNA binding protein: AGO2. Condition:p53_V_AGO_CLIP_3_6 PAR-CLIP data was present in ERX177622. RNA binding protein: AGO2. Condition:KO_V_AGO_CLIP_3_12 PAR-CLIP data was present in ERX177623. RNA binding protein: AGO2. Condition:p53_D_AGO_CLIP_4_1 PAR-CLIP data was present in ERX177624. RNA binding protein: AGO2. Condition:p53_V_AGO_CLIP_4_2 PAR-CLIP data was present in ERX177628. RNA binding protein: AGO2. Condition:p53_V_AGO_CLIP_4_6 PAR-CLIP data was present in ERX177629. RNA binding protein: AGO2. Condition:KO_D_AGO_CLIP_4_7 PAR-CLIP data was present in ERX177634. RNA binding protein: AGO2. Condition:KO_V_AGO_CLIP_4_12 ...

- Krell J; Stebbing J; Carissimi C; Dabrowska et al., 2016, Genome research.

Article - Krell J; Stebbing J; Carissimi C; Dabrowska et al.
- Genome research, 2016
DNA damage activates TP53-regulated surveillance mechanisms that are crucial in suppressing tumorigenesis. TP53 orchestrates these responses directly by transcriptionally modulating genes, including microRNAs (miRNAs), and by regulating miRNA biogenesis through interacting with the DROSHA complex. However, whether the association between miRNAs and AGO2 is regulated following DNA damage is not yet known. Here, we show that, following DNA damage, TP53 interacts with AGO2 to induce or reduce AGO2's association of a subset of miRNAs, including multiple let-7 family members. Furthermore, we show that specific mutations in TP53 decrease rather than increase the association of let-7 family miRNAs, reducing their activity without preventing TP53 from interacting with AGO2. This is consistent with the oncogenic properties of these mutants. Using AGO2 RIP-seq and PAR-CLIP-seq, we show that the DNA damage-induced increase in binding of let-7 family members to the RISC complex is functional. We unambiguously determine the global miRNA-mRNA interaction networks involved in the DNA damage response, validating them through the identification of miRNA-target chimeras formed by endogenous ligation reactions. We find that the target complementary region of the let-7 seed tends to have highly fixed positions and more variable ones. Additionally, we observe that miRNAs, whose cellular abundance or differential association with AGO2 is regulated by TP53, are involved in an intricate network of regulatory feedback and feedforward circuits. TP53-mediated regulation of AGO2-miRNA interaction represents a new mechanism of miRNA regulation in carcinogenesis.
LinkOut: [PMID: 26701625]
CLIP-seq Support 1 for dataset GSM4903825
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / PID14_NS
Location of target site NM_002906 | 3UTR | ACUACUACAUCUGUGAUGACUGGUUGUUCAAACACAAUGGAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161237
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_002906 | 3UTR | UUGUUGGUAACUAAUGUUAUUUUUUAAAACCUGGACCUUUUCUGGAAGGGCAGCAUAUAAAAACAUCAGUCCCGAGGAGGGGACAACAAUACUACCUCACUACUACAUCUGUGAUGACUGGUUGUUCAAACACAAUGGAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_002906 | 3UTR | UAAUGUUAUUUUUUAAAACCUGGACCUUUUCUGGAAGGGCAGCAUAUAAAAACAUCAGUCCCGAGGAGGGGACAACAAUACUACCUCACUACUACAUCUGUGAUGACUGGUUGUUCAAACACAAUGGAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_002906 | 3UTR | AUUUGUUGGUAACUAAUGUUAUUUUUUAAAACCUGGACCUUUUCUGGAAGGGCAGCAUAUAAAAACAUCAGUCCCGAGGAGGGGACAACAAUACUACCUCACUACUACAUCUGUGAUGACUGGUUGUUCAAACACAAUGGAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_002906 | 3UTR | ACUAAUGUUAUUUUUUAAAACCUGGACCUUUUCUGGAAGGGCAGCAUAUAAAAACAUCAGUCCCGAGGAGGGGACAACAAUACUACCUCACUACUACAUCUGUGAUGACUGGUUGUUCAAACACAAUGGAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_002906 | 3UTR | ACUAAUGUUAUUUUUUAAAACCUGGACCUUUUCUGGAAGGGCAGCAUAUAAAAACAUCAGUCCCGAGGAGGGGACAACAAUACUACCUCACUACUACAUCUGUGAUGACUGGUUGUUCAAACACAAUGGAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_002906 | 3UTR | UGGUAACUAAUGUUAUUUUUUAAAACCUGGACCUUUUCUGGAAGGGCAGCAUAUAAAAACAUCAGUCCCGAGGAGGGGACAACAAUACUACCUCACUACUACAUCUGUGAUGACUGGUUGUUCAAACACAAUGGAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000343115.4 | 3UTR | ACAACAAUACUACCUCACUACUACAUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 9 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000343115.4 | 3UTR | ACAACAAUACUACCUCACUACUACAUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28544 Breast cancer -0.676 1.4e-4 -0.660 2.2e-4 24 Click to see details
GSE19350 CNS germ cell tumors -0.523 4.1e-2 -0.427 8.3e-2 12 Click to see details
GSE42095 Differentiated embryonic stem cells 0.312 7.4e-2 0.352 5.0e-2 23 Click to see details
GSE38226 Liver fibrosis 0.273 1.2e-1 -0.031 4.5e-1 21 Click to see details
GSE17498 Multiple myeloma 0.162 1.6e-1 0.098 2.7e-1 40 Click to see details
GSE26953 Aortic valvular endothelial cells 0.184 1.9e-1 0.164 2.2e-1 24 Click to see details
GSE19783 ER- ER- breast cancer 0.096 2.0e-1 0.106 1.8e-1 79 Click to see details
GSE32688 Pancreatic cancer 0.154 2.0e-1 0.150 2.1e-1 32 Click to see details
GSE19783 ER+ ER+ breast cancer 0.181 2.2e-1 0.023 4.6e-1 20 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.174 2.3e-1 -0.245 1.5e-1 20 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.142 2.5e-1 -0.057 3.9e-1 25 Click to see details
GSE19536 Breast cancer 0.063 2.7e-1 0.114 1.3e-1 100 Click to see details
GSE21687 Ependynoma primary tumors -0.062 3.1e-1 -0.075 2.8e-1 64 Click to see details
GSE28260 Renal cortex and medulla 0.133 3.3e-1 0.044 4.4e-1 13 Click to see details
GSE28260 Renal cortex and medulla 0.133 3.3e-1 0.044 4.4e-1 13 Click to see details
GSE28260 Renal cortex and medulla 0.133 3.3e-1 0.044 4.4e-1 13 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
63 hsa-miR-921 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT054764 ANGPTL1 angiopoietin like 1 3 1
MIRT066171 PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma 2 2
MIRT069409 ZFYVE21 zinc finger FYVE-type containing 21 2 8
MIRT102284 DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 2 4
MIRT107595 DNAJA1 DnaJ heat shock protein family (Hsp40) member A1 2 6
MIRT178618 HIAT1 major facilitator superfamily domain containing 14A 2 2
MIRT182407 TIPRL TOR signaling pathway regulator 2 4
MIRT186552 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT273662 HOXC8 homeobox C8 2 2
MIRT283191 C16ORF52 chromosome 16 open reading frame 52 2 2
MIRT284890 NFAT5 nuclear factor of activated T-cells 5 2 2
MIRT347670 LSM14A LSM14A, mRNA processing body assembly factor 2 2
MIRT400222 SLC35F6 solute carrier family 35 member F6 2 2
MIRT403517 ASPH aspartate beta-hydroxylase 2 2
MIRT442251 DCTN5 dynactin subunit 5 2 2
MIRT443023 SDR39U1 short chain dehydrogenase/reductase family 39U member 1 2 2
MIRT443097 RNF20 ring finger protein 20 2 2
MIRT444560 TRA2B transformer 2 beta homolog 2 2
MIRT445696 PRKG1 protein kinase, cGMP-dependent, type I 2 2
MIRT454084 TMEM209 transmembrane protein 209 2 2
MIRT455463 LYPLA2 lysophospholipase II 2 2
MIRT456653 TIFA TRAF interacting protein with forkhead associated domain 2 2
MIRT458147 LYRM4 LYR motif containing 4 2 6
MIRT467073 SRRD SRR1 domain containing 2 4
MIRT467245 SPPL2A signal peptide peptidase like 2A 2 2
MIRT468246 SFXN4 sideroflexin 4 2 2
MIRT471589 PAQR5 progestin and adipoQ receptor family member 5 2 19
MIRT476639 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT482433 ADM adrenomedullin 2 10
MIRT486848 PERP PERP, TP53 apoptosis effector 2 6
MIRT489656 SHMT1 serine hydroxymethyltransferase 1 2 2
MIRT493441 KANSL1 KAT8 regulatory NSL complex subunit 1 2 6
MIRT493841 FOXN3 forkhead box N3 2 4
MIRT501378 RBFOX2 RNA binding protein, fox-1 homolog 2 2 10
MIRT509679 ATAD5 ATPase family, AAA domain containing 5 2 4
MIRT510280 MED28 mediator complex subunit 28 2 2
MIRT512221 ATXN3 ataxin 3 2 6
MIRT514030 BNIP2 BCL2 interacting protein 2 2 2
MIRT521375 RDX radixin 2 4
MIRT521444 RAD51 RAD51 recombinase 2 2
MIRT526055 CBR1 carbonyl reductase 1 2 2
MIRT528658 FUNDC2 FUN14 domain containing 2 2 2
MIRT529975 TNFAIP8L1 TNF alpha induced protein 8 like 1 2 2
MIRT544098 IPMK inositol polyphosphate multikinase 2 2
MIRT545579 SNRPA1 small nuclear ribonucleoprotein polypeptide A' 2 2
MIRT547424 MED4 mediator complex subunit 4 2 2
MIRT548955 CD2AP CD2 associated protein 2 2
MIRT549537 NDUFA6 NADH:ubiquinone oxidoreductase subunit A6 2 4
MIRT552550 ZFP36L2 ZFP36 ring finger protein like 2 2 4
MIRT554640 ROBO1 roundabout guidance receptor 1 2 2
MIRT564904 YTHDF1 YTH N6-methyladenosine RNA binding protein 1 2 2
MIRT565578 SLC6A8 solute carrier family 6 member 8 2 2
MIRT568312 BAG4 BCL2 associated athanogene 4 2 2
MIRT617891 PTCHD3 patched domain containing 3 2 2
MIRT621892 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT642850 RNF135 ring finger protein 135 2 2
MIRT665395 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT697879 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT698492 THOC2 THO complex 2 2 2
MIRT701227 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT701872 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT707045 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT715216 NPVF neuropeptide VF precursor 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-921 Progesterone approved 5994 Microarray Breast cancer 22330642 2012 up-regulated
miR-921 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-921 Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-921 Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-921 Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (PANC-1)
hsa-miR-921 Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-mir-921 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-mir-921 Androstenedione+Anastrozole resistant cell line (MCF-7)
hsa-mir-921 Cisplatin 5460033 NSC119875 approved sensitive cell line (KYSE)
hsa-mir-921 Fluorouracil 3385 NSC19893 approved sensitive cell line (OE19)
hsa-miR-921 Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-921 Doxorubicin 31703 NSC123127 approved resistant cell line (HS578T)
hsa-miR-921 Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-921 4-Hydroxytamoxifen+Tamoxifen resistant cell line (LY2)
hsa-miR-921 Ethanol+Tamoxifen resistant cell line (LY2)
hsa-miR-921 Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-miR-921 Sunitinib 5329102 NSC750690 approved resistant tissue (CardB)
hsa-miR-921 Pegylated interferon alpha+Ribavirin sensitive tissue (chronic hepatitis C)
hsa-miR-921 Oxaliplatin 6857599 NSC266046 approved resistant cell line (IGROV-1)
hsa-miR-921 Paclitaxel 36314 NSC125973 approved sensitive cell line (PC3PR20)
hsa-miR-921 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-921 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-921 Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR1)
hsa-miR-921 Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)

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