pre-miRNA Information
pre-miRNA hsa-mir-500b   
Genomic Coordinates chrX: 50010672 - 50010750
Description Homo sapiens miR-500b stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-500b-3p
Sequence 51| GCACCCAGGCAAGGAUUCUG |70
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs782140253 8 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol NPEPPS   
Synonyms AAP-S, MP100, PSA
Description aminopeptidase puromycin sensitive
Transcript NM_006310   
Expression
Putative miRNA Targets on NPEPPS
3'UTR of NPEPPS
(miRNA target sites are highlighted)
>NPEPPS|NM_006310|3'UTR
   1 ATCCTGAGGTGCCGCCATTGGCGGTTCTGCTGCTTCGCTGCAGGGATAAGGTGGAGCTACCGAACAGCTGATTCATATGC
  81 CAAGAATTTGGAGTCTTCTTTCAAACCAGTGGGGGTTGGACAATGAATGTAGTTAACTGGTTCCTGCTCACACTCCAGAA
 161 TTAAATTCTATTGAAAAAGGAAAATCAGCAATTCAGCAAAAAATAAATAAAAAATAAAAATGTAAATATGATAGTAATAA
 241 AATAGAGCATAACGAAACTGTGAAACTTTCTGAAGCCTTGTCAGTGGTTAAAAGTATTTAACACTCTACTGTTAATGACA
 321 GATGTTCTGTTTTTATAACCTACCAAAAGGAAACTAGAGGCTTCTTGGTGAAGAGCATTTTTGTGAAGTGGGTTCTGCAA
 401 GGAGCCTATAAAGCCAAGGGTGGTGTCCATTTCTGGGAATGGTTAAACACAAAAGGCTGATAGCTGGTATCACATAGTTG
 481 GAGTCAGTGCATAATTCCAAGTGGCTTTTTTTTTTTTTGGCACGGGGACTGATCAGGAAGATATATTCCTGCATAACTCA
 561 ATCTGAACCAAGGATTGTAGTTTAGTTTTCCTCCTTGCCTTCCCTTCTGTGTGACCGACCCCTTGGCCAAAAAAAAACAA
 641 AAAGCAAAAAACAAAAACCTACCCTGTTCTGGTTTTTTTCCTCCCTTTAGTTCCACCCCCAACCCCCATTCCCTGGTGTC
 721 CTTCTTAGAGATGAAGAAATAATAAGGAAACATCTTTCATAGCCACATTAAATAAGAGAAACTGATATACATTATTTTTT
 801 TCTTTTTAAAGATGACTTATAAGAACCCTGAAATTTATATAGGTGAGACAATAGAAATAAAAAGATCTTCAGCCAGGCCT
 881 TTCTGAAGGAGTTATTCTGCTAAAAATGGTCTTAGTTGTCTGAAAAGCCAGCTCTTGAACCTCTTCACAACAGTATCAAC
 961 ACTGGCTTCTCCCGGTTCATTTTATGCGTGCGAGAAGTCAGTGGTAACTGCTGCAGGGCTTAATACATTAGTGGTAACTG
1041 GTTTAAAAAACAAAGACTGTAAGCCTGTGTGTGCCACTGTTTGCTTCAACAGTATATCCTAATAAGCCTCACCTATTTAA
1121 TCCAATGAGTTTTAAATCTAAATCTCATTCCCTTCTTCTTTCCCTACCTTTTTTTTCTTTTTTTCTTAAAAAAATATTTT
1201 GTGTTATTAACAGAAATTCATATTTGGTGTGGCTTAACGGTATTTCAGAAGGTCATCAGATTGTGAGACTGCTTCCTTGA
1281 AACATTTTTGTGCTATTGTTTTAAAAAAATAATTAAAAAACAGTTGGCGTTAATAAAAATGTCAATGTGAAACTGAAAAA
1361 AAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' guCUUAGGAACGGACCCACg 5'
            || | :  ||||| ||| 
Target 5' aaGACTGTAAGCCTGTGTGt 3'
1053 - 1072 122.00 -11.50
2
miRNA  3' gucuuAGGAACG--------GACCCACg 5'
               |||||||        ||| ||| 
Target 5' tttccTCCTTGCCTTCCCTTCTGTGTGa 3'
587 - 614 121.00 -13.20
3
miRNA  3' guCUUAGGAACGGACCCacg 5'
            | :||| | :|||||   
Target 5' tgGTGTCCATTTCTGGGaat 3'
421 - 440 118.00 -12.42
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31527033 6 COSMIC
COSN26986856 15 COSMIC
COSN30178011 25 COSMIC
COSN17489732 47 COSMIC
COSN26648834 50 COSMIC
COSN31606304 75 COSMIC
COSN8837652 159 COSMIC
COSN31487542 195 COSMIC
COSN31563585 255 COSMIC
COSN31480318 273 COSMIC
COSN31565215 332 COSMIC
COSN31564932 363 COSMIC
COSN20114051 519 COSMIC
COSN31486659 560 COSMIC
COSN31548077 670 COSMIC
COSN30545148 734 COSMIC
COSN20296637 935 COSMIC
COSN20114052 1102 COSMIC
COSN31520890 1106 COSMIC
COSN20467445 1123 COSMIC
COSN30587770 1177 COSMIC
COSN31532670 1177 COSMIC
COSN31575972 1195 COSMIC
COSN19534195 1239 COSMIC
COSN31528407 1310 COSMIC
COSN31482541 1321 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs774511140 2 dbSNP
rs761756611 6 dbSNP
rs767566250 14 dbSNP
rs1313181319 15 dbSNP
rs751139571 17 dbSNP
rs1173415533 19 dbSNP
rs773223548 20 dbSNP
rs1461781711 21 dbSNP
rs1296733760 22 dbSNP
rs760673351 23 dbSNP
rs766339983 24 dbSNP
rs1021725923 25 dbSNP
rs149267740 25 dbSNP
rs754725558 25 dbSNP
rs1353882650 26 dbSNP
rs754684842 30 dbSNP
rs764761486 31 dbSNP
rs1296181686 37 dbSNP
rs752258993 38 dbSNP
rs1336830758 43 dbSNP
rs1338692898 44 dbSNP
rs1224967682 47 dbSNP
rs1311986055 49 dbSNP
rs1257475611 51 dbSNP
rs1015336989 52 dbSNP
rs1269028105 61 dbSNP
rs111492806 62 dbSNP
rs962564361 66 dbSNP
rs1399802167 78 dbSNP
rs954242515 79 dbSNP
rs368206440 84 dbSNP
rs1413845364 89 dbSNP
rs1164562165 91 dbSNP
rs1210876131 94 dbSNP
rs1474051048 96 dbSNP
rs1236242413 97 dbSNP
rs1006911173 100 dbSNP
rs1488837457 103 dbSNP
rs1265543482 110 dbSNP
rs1277389931 111 dbSNP
rs1020016695 114 dbSNP
rs567598443 116 dbSNP
rs536602461 117 dbSNP
rs1446712054 124 dbSNP
rs930895920 125 dbSNP
rs556588263 134 dbSNP
rs966019177 142 dbSNP
rs915936785 146 dbSNP
rs1292632544 152 dbSNP
rs1218964605 153 dbSNP
rs1342117959 154 dbSNP
rs975965797 157 dbSNP
rs1444304356 171 dbSNP
rs1429585969 176 dbSNP
rs1350168885 180 dbSNP
rs950018138 192 dbSNP
rs576642911 201 dbSNP
rs903263407 201 dbSNP
rs1474452136 205 dbSNP
rs1190678567 223 dbSNP
rs548374813 227 dbSNP
rs934700641 230 dbSNP
rs1390647664 231 dbSNP
rs1185206513 232 dbSNP
rs1475176631 242 dbSNP
rs1247516732 249 dbSNP
rs1434027563 254 dbSNP
rs1449963270 256 dbSNP
rs1171476667 259 dbSNP
rs1272677991 259 dbSNP
rs1199160007 277 dbSNP
rs539258699 280 dbSNP
rs1276051315 293 dbSNP
rs1414872171 296 dbSNP
rs892939251 296 dbSNP
rs1276277722 303 dbSNP
rs984553266 317 dbSNP
rs996745236 322 dbSNP
rs34314592 327 dbSNP
rs757053589 348 dbSNP
rs890828884 351 dbSNP
rs747442625 362 dbSNP
rs948449997 376 dbSNP
rs1297714563 382 dbSNP
rs1044090086 392 dbSNP
rs1426077059 398 dbSNP
rs928275007 403 dbSNP
rs559223234 404 dbSNP
rs961161687 406 dbSNP
rs572663108 407 dbSNP
rs1053361601 413 dbSNP
rs1347553236 419 dbSNP
rs1201432358 424 dbSNP
rs1203504494 426 dbSNP
rs1027843555 433 dbSNP
rs1280526841 436 dbSNP
rs892018491 443 dbSNP
rs569863983 451 dbSNP
rs952173141 458 dbSNP
rs149109100 461 dbSNP
rs916157421 463 dbSNP
rs950068716 465 dbSNP
rs1043595162 475 dbSNP
rs1448365202 481 dbSNP
rs889901177 484 dbSNP
rs1210592401 491 dbSNP
rs560192363 492 dbSNP
rs1360080045 498 dbSNP
rs369565339 505 dbSNP
rs1176524495 506 dbSNP
rs1248263524 506 dbSNP
rs57585141 506 dbSNP
rs796072799 506 dbSNP
rs879039677 506 dbSNP
rs893002573 511 dbSNP
rs1191644704 513 dbSNP
rs1379338891 515 dbSNP
rs1208490417 519 dbSNP
rs1478230871 520 dbSNP
rs1157840341 521 dbSNP
rs1382252046 522 dbSNP
rs1458492581 524 dbSNP
rs932481241 525 dbSNP
rs190680892 542 dbSNP
rs767101980 545 dbSNP
rs1305721005 550 dbSNP
rs1322114215 552 dbSNP
rs1391318359 554 dbSNP
rs552338624 562 dbSNP
rs1234409108 574 dbSNP
rs1304899156 578 dbSNP
rs1279338469 595 dbSNP
rs774110830 605 dbSNP
rs1375029740 616 dbSNP
rs1421801240 618 dbSNP
rs891047244 620 dbSNP
rs755545688 621 dbSNP
rs1424269189 629 dbSNP
rs879074100 629 dbSNP
rs1230486008 632 dbSNP
rs1269060745 633 dbSNP
rs1485235527 636 dbSNP
rs1218302482 638 dbSNP
rs747999757 638 dbSNP
rs1468064542 639 dbSNP
rs1007374517 650 dbSNP
rs1259613727 658 dbSNP
rs1019647649 663 dbSNP
rs896790740 670 dbSNP
rs995290899 673 dbSNP
rs1181875507 682 dbSNP
rs1231787625 686 dbSNP
rs1355196947 692 dbSNP
rs746306135 695 dbSNP
rs562660393 703 dbSNP
rs1299230146 708 dbSNP
rs1026721400 715 dbSNP
rs901182302 717 dbSNP
rs952223544 721 dbSNP
rs181526426 722 dbSNP
rs551244423 724 dbSNP
rs1473341191 729 dbSNP
rs1159419982 738 dbSNP
rs1162676136 753 dbSNP
rs994092123 759 dbSNP
rs1416771697 760 dbSNP
rs1459414285 768 dbSNP
rs1023097763 773 dbSNP
rs1195650300 783 dbSNP
rs1426306846 788 dbSNP
rs971679986 789 dbSNP
rs1164557783 795 dbSNP
rs1270775736 809 dbSNP
rs1393425673 815 dbSNP
rs1212329113 821 dbSNP
rs1026194460 825 dbSNP
rs372371302 837 dbSNP
rs924652386 844 dbSNP
rs956224001 852 dbSNP
rs17609248 853 dbSNP
rs1348989295 857 dbSNP
rs1412108071 861 dbSNP
rs1387613179 867 dbSNP
rs1369782924 868 dbSNP
rs1289213284 871 dbSNP
rs1460847703 872 dbSNP
rs367570351 879 dbSNP
rs1334511395 884 dbSNP
rs1016492452 892 dbSNP
rs1372092851 896 dbSNP
rs749741703 903 dbSNP
rs980250847 906 dbSNP
rs375614287 913 dbSNP
rs928359274 921 dbSNP
rs1485803622 940 dbSNP
rs17677508 944 dbSNP
rs988446468 952 dbSNP
rs1254825136 958 dbSNP
rs552229891 974 dbSNP
rs553067928 975 dbSNP
rs1188856525 977 dbSNP
rs1468379361 977 dbSNP
rs1259308655 979 dbSNP
rs1211863933 985 dbSNP
rs1420839915 986 dbSNP
rs143209825 988 dbSNP
rs779291559 989 dbSNP
rs756584904 992 dbSNP
rs1037339241 993 dbSNP
rs896847079 998 dbSNP
rs1373761732 1001 dbSNP
rs1401909835 1003 dbSNP
rs1289449134 1005 dbSNP
rs1361195507 1007 dbSNP
rs1380402994 1015 dbSNP
rs748464036 1017 dbSNP
rs1348283960 1022 dbSNP
rs1233170546 1025 dbSNP
rs1198080544 1026 dbSNP
rs1277730269 1027 dbSNP
rs1355308454 1028 dbSNP
rs1215888023 1035 dbSNP
rs1389652049 1036 dbSNP
rs901229846 1040 dbSNP
rs1173008403 1041 dbSNP
rs1467246785 1045 dbSNP
rs995573027 1051 dbSNP
rs201093336 1052 dbSNP
rs749565799 1052 dbSNP
rs1011967593 1053 dbSNP
rs1185245665 1054 dbSNP
rs1255332495 1058 dbSNP
rs1454965633 1059 dbSNP
rs1184567205 1066 dbSNP
rs772585628 1073 dbSNP
rs1173311440 1074 dbSNP
rs1167810901 1080 dbSNP
rs1025575577 1081 dbSNP
rs3065062 1099 dbSNP
rs71712895 1100 dbSNP
rs80040289 1103 dbSNP
rs886379973 1106 dbSNP
rs1278493396 1108 dbSNP
rs1369315585 1112 dbSNP
rs1354477287 1114 dbSNP
rs1281386158 1116 dbSNP
rs1006537574 1119 dbSNP
rs3809866 1123 dbSNP
rs1335157456 1125 dbSNP
rs970293211 1135 dbSNP
rs979920951 1139 dbSNP
rs550121585 1151 dbSNP
rs1334495049 1152 dbSNP
rs1416427450 1152 dbSNP
rs1035861039 1153 dbSNP
rs1309033214 1156 dbSNP
rs148390023 1163 dbSNP
rs1032334064 1166 dbSNP
rs1394541601 1167 dbSNP
rs1409527828 1168 dbSNP
rs1156363064 1169 dbSNP
rs199946088 1169 dbSNP
rs956107289 1169 dbSNP
rs1314885228 1170 dbSNP
rs575887993 1174 dbSNP
rs565997512 1175 dbSNP
rs1272387615 1177 dbSNP
rs3087904 1178 dbSNP
rs990114006 1178 dbSNP
rs1205540247 1181 dbSNP
rs1279377927 1184 dbSNP
rs1484455997 1186 dbSNP
rs1183212431 1188 dbSNP
rs1222152655 1188 dbSNP
rs1256467741 1193 dbSNP
rs1427403277 1195 dbSNP
rs1190469335 1196 dbSNP
rs1388795258 1200 dbSNP
rs1284734451 1203 dbSNP
rs1451884680 1204 dbSNP
rs914541780 1211 dbSNP
rs954142000 1212 dbSNP
rs1375244451 1220 dbSNP
rs1400215023 1221 dbSNP
rs959754188 1233 dbSNP
rs1346615870 1236 dbSNP
rs371805362 1239 dbSNP
rs988500459 1260 dbSNP
rs1399646189 1261 dbSNP
rs879054629 1266 dbSNP
rs1464902209 1268 dbSNP
rs570045811 1270 dbSNP
rs1166257116 1272 dbSNP
rs1476496046 1289 dbSNP
rs943856587 1294 dbSNP
rs1187746039 1296 dbSNP
rs546471628 1303 dbSNP
rs918496788 1303 dbSNP
rs912890518 1304 dbSNP
rs1403266067 1310 dbSNP
rs774009700 1310 dbSNP
rs1381710943 1311 dbSNP
rs931205976 1316 dbSNP
rs1367194217 1318 dbSNP
rs1332659458 1320 dbSNP
rs1272249635 1321 dbSNP
rs564754336 1322 dbSNP
rs1302638298 1329 dbSNP
rs894782580 1330 dbSNP
rs1310182941 1341 dbSNP
rs1331149363 1345 dbSNP
rs979422286 1346 dbSNP
rs1046158769 1356 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 9520.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gucuuaggaacgGACCCACg 5'
                      ||||||| 
Target 5' ----------agCUGGGUGc 3'
1 - 10
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000322157.4 | 3UTR | AGCUGGGUGCGGUGGCUCACG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
172 hsa-miR-500b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059905 HDGF heparin binding growth factor 2 4
MIRT235394 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 2 4
MIRT442246 PYGO1 pygopus family PHD finger 1 2 2
MIRT443591 ZNF439 zinc finger protein 439 2 4
MIRT453280 EFTUD2 elongation factor Tu GTP binding domain containing 2 2 2
MIRT463540 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT465589 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT469462 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT485449 KCTD15 potassium channel tetramerization domain containing 15 2 4
MIRT486682 WDR81 WD repeat domain 81 2 2
MIRT489078 POLM DNA polymerase mu 2 2
MIRT493734 GREM2 gremlin 2, DAN family BMP antagonist 2 2
MIRT494872 DYNLL2 dynein light chain LC8-type 2 2 2
MIRT496130 RNF103-CHMP3 RNF103-CHMP3 readthrough 2 2
MIRT496489 CHMP3 charged multivesicular body protein 3 2 2
MIRT496924 CLMN calmin 2 2
MIRT497297 TMEM119 transmembrane protein 119 2 2
MIRT499103 AGRN agrin 2 2
MIRT508979 CXorf38 chromosome X open reading frame 38 2 2
MIRT509911 NIPAL1 NIPA like domain containing 1 2 2
MIRT512820 ARRDC2 arrestin domain containing 2 2 4
MIRT512827 KBTBD6 kelch repeat and BTB domain containing 6 2 4
MIRT515360 MRPL52 mitochondrial ribosomal protein L52 2 2
MIRT516610 TRIM58 tripartite motif containing 58 2 2
MIRT517053 TLDC1 TBC/LysM-associated domain containing 1 2 2
MIRT517637 ZNF491 zinc finger protein 491 2 2
MIRT518270 LEAP2 liver enriched antimicrobial peptide 2 2 2
MIRT518625 STAR steroidogenic acute regulatory protein 2 2
MIRT518887 N4BP2L2 NEDD4 binding protein 2 like 2 2 2
MIRT519026 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT520365 UBE2G2 ubiquitin conjugating enzyme E2 G2 2 2
MIRT521106 SLC1A5 solute carrier family 1 member 5 2 2
MIRT521943 PHC3 polyhomeotic homolog 3 2 2
MIRT522253 NPEPPS aminopeptidase puromycin sensitive 2 2
MIRT522853 KIAA1551 KIAA1551 2 2
MIRT522868 KIAA1549 KIAA1549 2 2
MIRT524207 DDX19B DEAD-box helicase 19B 2 2
MIRT526004 ARHGAP27 Rho GTPase activating protein 27 2 2
MIRT527769 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT527827 TMEM74B transmembrane protein 74B 2 2
MIRT527861 SMOC1 SPARC related modular calcium binding 1 2 2
MIRT528040 WT1 Wilms tumor 1 2 2
MIRT529802 ZDHHC8 zinc finger DHHC-type containing 8 2 2
MIRT531723 TARS threonyl-tRNA synthetase 2 2
MIRT531996 BARD1 BRCA1 associated RING domain 1 2 2
MIRT533338 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT533621 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT533652 TMOD2 tropomodulin 2 2 2
MIRT534397 SENP3 SUMO1/sentrin/SMT3 specific peptidase 3 2 2
MIRT538686 CCDC80 coiled-coil domain containing 80 2 2
MIRT540444 RBM43 RNA binding motif protein 43 2 2
MIRT542586 ZC3H12C zinc finger CCCH-type containing 12C 2 8
MIRT542796 PLEKHA3 pleckstrin homology domain containing A3 2 4
MIRT542991 ERC1 ELKS/RAB6-interacting/CAST family member 1 2 2
MIRT544424 ZNF460 zinc finger protein 460 2 4
MIRT545740 ESF1 ESF1 nucleolar pre-rRNA processing protein homolog 2 4
MIRT552618 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT554456 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT569663 PRIM1 DNA primase subunit 1 2 2
MIRT569924 PCSK9 proprotein convertase subtilisin/kexin type 9 2 2
MIRT570140 IL1RL2 interleukin 1 receptor like 2 2 2
MIRT573558 TMEM120B transmembrane protein 120B 2 2
MIRT574282 OPRD1 opioid receptor delta 1 2 2
MIRT575335 Fbxo6 F-box protein 6 2 2
MIRT607057 IDS iduronate 2-sulfatase 2 2
MIRT607078 POM121L7 POM121 transmembrane nucleoporin like 7 pseudogene 2 2
MIRT607500 HEBP2 heme binding protein 2 2 2
MIRT607530 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT607808 RHBDL2 rhomboid like 2 2 2
MIRT608079 ZFP14 ZFP14 zinc finger protein 2 2
MIRT609119 NUDT3 nudix hydrolase 3 2 2
MIRT609745 PTCH1 patched 1 2 2
MIRT612904 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 2 2
MIRT618720 PCSK2 proprotein convertase subtilisin/kexin type 2 2 2
MIRT618778 HLA-E major histocompatibility complex, class I, E 2 2
MIRT619015 SLC2A6 solute carrier family 2 member 6 2 2
MIRT623223 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 2
MIRT623819 GEMIN6 gem nuclear organelle associated protein 6 2 2
MIRT625704 OPTN optineurin 2 2
MIRT626437 CHDH choline dehydrogenase 2 2
MIRT628087 KAT7 lysine acetyltransferase 7 2 2
MIRT628936 APOB apolipoprotein B 2 2
MIRT633543 PGBD5 piggyBac transposable element derived 5 2 2
MIRT634348 SGOL1 shugoshin 1 2 2
MIRT634611 KIAA1919 major facilitator superfamily domain containing 4B 2 2
MIRT635243 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT636681 BTLA B and T lymphocyte associated 2 2
MIRT636923 ZNF845 zinc finger protein 845 2 2
MIRT637606 ZNF554 zinc finger protein 554 2 2
MIRT639242 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT640835 POLR3A RNA polymerase III subunit A 2 2
MIRT642098 FBXL2 F-box and leucine rich repeat protein 2 2 2
MIRT643087 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT643934 C17orf104 meiosis specific with coiled-coil domain 2 2
MIRT644353 FXN frataxin 2 2
MIRT645628 SF3A3 splicing factor 3a subunit 3 2 2
MIRT645754 FAM213A family with sequence similarity 213 member A 2 2
MIRT646329 MVB12B multivesicular body subunit 12B 2 2
MIRT646817 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT647019 ADCY2 adenylate cyclase 2 2 2
MIRT647621 IGSF9B immunoglobulin superfamily member 9B 2 2
MIRT648517 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT648871 ABCA6 ATP binding cassette subfamily A member 6 2 2
MIRT649620 ITPKC inositol-trisphosphate 3-kinase C 2 2
MIRT650062 CCDC134 coiled-coil domain containing 134 2 2
MIRT650734 TNFSF8 TNF superfamily member 8 2 2
MIRT652389 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT654352 RBM27 RNA binding motif protein 27 2 2
MIRT655796 NOVA2 NOVA alternative splicing regulator 2 2 2
MIRT657329 HNRNPK heterogeneous nuclear ribonucleoprotein K 2 2
MIRT657734 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT660613 ANO6 anoctamin 6 2 2
MIRT661243 ARL17B ADP ribosylation factor like GTPase 17B 2 2
MIRT662245 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662921 MED18 mediator complex subunit 18 2 2
MIRT662963 JPH2 junctophilin 2 2 2
MIRT663347 ZNF74 zinc finger protein 74 2 2
MIRT663528 MASTL microtubule associated serine/threonine kinase like 2 2
MIRT663547 CCR6 C-C motif chemokine receptor 6 2 2
MIRT663977 ZNF786 zinc finger protein 786 2 2
MIRT664084 METTL2B methyltransferase like 2B 2 2
MIRT664358 C16orf45 chromosome 16 open reading frame 45 2 2
MIRT664421 TIGD6 tigger transposable element derived 6 2 2
MIRT664476 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT664979 TDRD1 tudor domain containing 1 2 2
MIRT665128 PYCRL pyrroline-5-carboxylate reductase 3 2 2
MIRT666259 SLC31A1 solute carrier family 31 member 1 2 2
MIRT666321 SLC16A10 solute carrier family 16 member 10 2 2
MIRT666881 POLQ DNA polymerase theta 2 2
MIRT668469 FADS6 fatty acid desaturase 6 2 2
MIRT669554 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT669835 ISCA2 iron-sulfur cluster assembly 2 2 2
MIRT670185 CCDC142 coiled-coil domain containing 142 2 2
MIRT672020 PXMP4 peroxisomal membrane protein 4 2 2
MIRT672070 KIAA0930 KIAA0930 2 2
MIRT672475 RTTN rotatin 2 2
MIRT672851 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT673090 AK1 adenylate kinase 1 2 2
MIRT673581 KDELC2 KDEL motif containing 2 2 2
MIRT674586 SLC35B4 solute carrier family 35 member B4 2 2
MIRT675001 STRN3 striatin 3 2 2
MIRT679018 MTMR10 myotubularin related protein 10 2 2
MIRT679680 STAT3 signal transducer and activator of transcription 3 2 2
MIRT682833 FLG2 filaggrin family member 2 2 2
MIRT682886 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT683442 AP3B2 adaptor related protein complex 3 beta 2 subunit 2 2
MIRT687040 RNF115 ring finger protein 115 2 2
MIRT691957 RHOH ras homolog family member H 2 2
MIRT694625 ZFPM1 zinc finger protein, FOG family member 1 2 2
MIRT695637 SLC26A2 solute carrier family 26 member 2 2 2
MIRT697640 WRN Werner syndrome RecQ like helicase 2 2
MIRT702009 MIDN midnolin 2 2
MIRT702034 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
MIRT704789 CDK6 cyclin dependent kinase 6 2 2
MIRT705728 AMMECR1L AMMECR1 like 2 2
MIRT705879 ADM adrenomedullin 2 2
MIRT706220 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT708418 CERS4 ceramide synthase 4 2 2
MIRT709114 C3orf18 chromosome 3 open reading frame 18 2 2
MIRT709595 ITPA inosine triphosphatase 2 2
MIRT710945 MRPL45 mitochondrial ribosomal protein L45 2 2
MIRT712345 NLN neurolysin 2 2
MIRT712530 CYTH2 cytohesin 2 2 2
MIRT714019 ASCC1 activating signal cointegrator 1 complex subunit 1 2 2
MIRT717287 ARMC12 armadillo repeat containing 12 2 2
MIRT717733 FGF1 fibroblast growth factor 1 2 2
MIRT718083 CLIC5 chloride intracellular channel 5 2 2
MIRT718562 MUC20 mucin 20, cell surface associated 2 2
MIRT721639 MYLK3 myosin light chain kinase 3 2 2
MIRT722632 C8A complement C8 alpha chain 2 2
MIRT723177 CDCA4 cell division cycle associated 4 2 2
MIRT725523 FAM229B family with sequence similarity 229 member B 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-500b Methotrexate 126941 NSC740 approved resistant cell line (W1)
hsa-miR-500b-3p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-500b-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-500b-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-500b-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-500b-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-500b-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)

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