pre-miRNA Information
pre-miRNA hsa-mir-2115   
Genomic Coordinates chr3: 48316360 - 48316459
Description Homo sapiens miR-2115 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-2115-3p
Sequence 58| CAUCAGAAUUCAUGGAGGCUAG |79
Evidence Experimental
Experiments 454
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN31490809 22 COSMIC
COSN31579735 22 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs543123304 18 dbSNP
rs1450988157 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol KCNJ3   
Synonyms GIRK1, KGA, KIR3.1
Description potassium voltage-gated channel subfamily J member 3
Transcript NM_002239   
Expression
Putative miRNA Targets on KCNJ3
3'UTR of KCNJ3
(miRNA target sites are highlighted)
>KCNJ3|NM_002239|3'UTR
   1 CAAAGCACTCCCTTAGGCATTATTTAATGTTTGATTTAGTAATAGTCCAATATTTGGCGATGAGGTAATTCTCCCTAAGG
  81 AATCTGAAAGTATATTTTCCTCCCAGTTCTACAAGCATATTTGAGAACCCTTCCTTTCCCAAGTATTGCGAATGTGCAGA
 161 AAGCAACAGTTACGGAGGGAGGACATCATAAGGAAGTTATTAACGGGCATGTATTATCACATCAAGCATGCAATAATGTG
 241 CAAATTTTGCATTTAGTTTTATGGCATGATTTATATATGGCATATTTATATTGTATATTCTGGAAAAAAAATATATATAT
 321 ATATTTAAAGGGGAGATACTCTCCCTGACATTTCTAACATATGTATTAAGCCAAACATGAGTGAATAGCTTTCAGGGCGA
 401 TAAAACTAAATATATGTCTGTGTGTGTGTGTGTATGTATACACACATATACATATATATATACACATACATACACATACA
 481 TACATACATACATATATATCTGATAAAATTGTGATGTTTTGTTCAAAGTTGTAGTTCTTGTGCATGTTTACTTTATTAGA
 561 GTAGGAAGGCTACTGGCATTAATTATTAATACCAAATATTTTAGCCTTAAATTTTTGTCATTTTAAAATCTGATTTAATG
 641 TTTTCTGCTGTTTAAGGTCTTGGGAGGCTTTCAATTGTATTTTATATGAGAGAATCACACAAGTTTGTGCTATCTATGGC
 721 CCTGCAAAAATATAACCATTACATGTTTAAATTGTAAATTTTAGAGCATACCAGTACTCAGTATAGCATTGAACATTTCT
 801 TATGATTTTTAAAAGTTGCTAGTACTGGGGAGAAATAATTGTTGATTAATTTGAGAATTATTCCTTTCCTAGACTAATTA
 881 AAATCTGGAAATCTGTTTTGTATATGATCTAATACAAAGATGAGCTCTGAACAAACACTGAATCATGTTAATAGACAGTA
 961 GCCAAGTTATATTGAATATATCAGAATCTGTGTGAAGTTACACAATTAATTGTCCCTGTTTCAAACTGAGTAAATTGGAA
1041 ACATTTTCTTTCTTTTTCTGGAAATTTTGTCCATTTTAAAAACCAATCATTTTAAGAAGACATGACAATGCAATGAAACA
1121 GATGATAAATATTTATGCTTAAAATATGTATGTCTAATTGAGTCTCTTTTTTATTCTGTTTTCTTGTTTATGGCATTTGT
1201 TGTAACAGGATAGACTTTTTCCTCACCTAGGAAACCTATCCCATGCCTGTCACTTATAGTTCAGGAGGAAGTTTTTGCAC
1281 AGACCAGAGAGAAATTAAAATTAGATGATAAATTGAAGATATCTTACACACAGTTTTTTGGTGAACACTGATTTTATTGG
1361 TGTCTTAGATCCCTAGTCTACCCAAATAATTTTAACAGTACTGTTTTTTCTAATCCTGAAGTCTGATATTTATGACTCAT
1441 TAGCAGGAATCAAAACTAGTGATCAGTAGAACACTTTCAAAATAAAAATTTGGAATGCAGACTTTTATGAAAATTTAAAA
1521 GTGCTCCTTAACAGAATATCATGGGTTTTCCTATAAAACTTCTTTAAGTATTGTAATTCCAGTCTGCCCCAACTTTAAAA
1601 AAAATTCTTATTAATATGTCAGTCATTAATTGCTAGTTTGGGCTCTCATTATTTCCTGTTTTTTAACAATTTTGTGATAA
1681 TTTTATTATTGGCAAATTAATACATCAACACTTAAATCATTGACTATAATAATACCTTCTGGCTACCTCTGTATCAACCA
1761 AATTCTGTAGGTGCAAACATATACCAGGGAATTCTTACTGGCAAAATGATCAATCTGGAGTGTGCATCCACTGTGAATGG
1841 AGCAAATTGCCCTATACCCATTGATAACCTAGCTTTCTTAGTTTGTAGATGTAGGAAACAAAATAGTGACAGAGAGAGAA
1921 GGGGGTCCACAGGGCATGGTATATTTATCAGCAGTGGAAAAAAAGTGCATAGATCATTTAGTCCAAGAACTTAAAACTAA
2001 ATAGAGCCATAATTTACTTTGGAGAGTCATTTTAATTTGTCTTTGGTACCAAGGAGAAGACGGAACCAAAAACAAACTCT
2081 CCAAGTATATTCACACATTCAACAAAATTTTTGCATGCCTTCTATGTCGTAGGCATTTTTAGTTCCTGGGGATTTGGACA
2161 TGGCTAAGTCAGAGAAGGCCATTGCTCACCATGAACACTGTATACCAGAAGGAGAGTGGGGAGGAGACAAAAAACAAATA
2241 AGACCACTTCAGACAATCAAAGTATCAGTTAAGAGAATGAAAACAGGCCTGACTCAGTGGCTCACGCCTGTAATCCCAGT
2321 ACTTTGGGAGGCGGAGGTTGGGGGATCACCTGAGGTCAGGAGATCGAGACCAGCCTGGACAACATGGTGAAAACCCGTCT
2401 CTACTAAAAATACAAAAATTAACTGGGCATGGTGGCAGGCACCTGTAATCCCAGCTACTGGGGAAGCTGAGGCAGGAGAA
2481 TCGTTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATTCTGCCACTGCACTCCAGCCTGGGTGACAGTGCGAGACT
2561 CCATCTCAACATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATAAAAACAGGGTAACATAATGCA
2641 AAGTAACTGTGTGGAATAAAAATTGATTATTTTAGAAAATGTGACTGGCTTAGGACGGGGATAATATGTGAACAGAAATC
2721 TATCTCATGAGAAAGTGCTACTGTTGTCAAAATTACCTTATCTGAGTGAATGGTATTTTTTTTATCTTTTCCACACATGC
2801 GTGGGAAAGGTATGATTTCTGCATGTAATTGCAGTTTAACCCTTATTTCTAGGTTGATCATAGGTCCCAGTTTACCCAGG
2881 AAAATTCCAGTTTATACCTGTTGTACCTGTGTAATTATTGGTAGCACTCCCTTTCACTCTTACAATGTCTTGGTTTGGAT
2961 GATATATGGTGAAGTTTTTGTTGAAACTAAATTATGAAGTCTGATATATTTGGATAAAAATAAAGAATTGCTTTTCTTC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaucggAGGUACUUAAGACUAc 5'
                ||| |||| |||||| 
Target 5' ttctaaTCC-TGAAGTCTGATa 3'
1408 - 1428 135.00 -13.00
2
miRNA  3' gaucggaGGUACUUAAGACUAc 5'
                 ::||||| |||||| 
Target 5' aactaaaTTATGAAGTCTGATa 3'
2985 - 3006 135.00 -11.30
3
miRNA  3' gaUCGGAG-GUACUUAAGACUAc 5'
            ||:||| : |  |||||| | 
Target 5' tgAGTCTCTTTTTTATTCTGTTt 3'
1159 - 1181 128.00 -13.72
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31500178 2 COSMIC
COSN31514303 12 COSMIC
COSN30178996 17 COSMIC
COSN30752470 19 COSMIC
COSN28655654 33 COSMIC
COSN30114830 55 COSMIC
COSN30636214 59 COSMIC
COSN30528380 65 COSMIC
COSN1226887 66 COSMIC
COSN31528195 72 COSMIC
COSN20090662 93 COSMIC
COSN8607730 107 COSMIC
COSN28642601 114 COSMIC
COSN8607731 114 COSMIC
COSN20097265 312 COSMIC
COSN27206904 312 COSMIC
COSN31656847 312 COSMIC
COSN32063883 313 COSMIC
COSN20929739 326 COSMIC
COSN15755523 359 COSMIC
COSN23284368 375 COSMIC
COSN31538629 400 COSMIC
COSN31551217 421 COSMIC
COSN31488124 427 COSMIC
COSN27991155 433 COSMIC
COSN31590317 452 COSMIC
COSN8607732 533 COSMIC
COSN9070546 538 COSMIC
COSN31590315 540 COSMIC
COSN31589421 579 COSMIC
COSN31539943 631 COSMIC
COSN8607733 641 COSMIC
COSN31521983 649 COSMIC
COSN8607734 688 COSMIC
COSN31571053 693 COSMIC
COSN31548101 762 COSMIC
COSN31535978 767 COSMIC
COSN8607735 830 COSMIC
COSN28795391 875 COSMIC
COSN31486904 894 COSMIC
COSN8607736 957 COSMIC
COSN31606988 1053 COSMIC
COSN9070547 1163 COSMIC
COSN8607737 1165 COSMIC
COSN28495478 1216 COSMIC
COSN28662283 1243 COSMIC
COSN20827374 1565 COSMIC
COSN16526747 1616 COSMIC
COSN27597065 1814 COSMIC
COSN23332474 1886 COSMIC
COSN32065709 1906 COSMIC
COSN28201064 1932 COSMIC
COSN25527966 2040 COSMIC
COSN22186916 2127 COSMIC
COSN9070548 2129 COSMIC
COSN7110816 2354 COSMIC
COSN17007613 2485 COSMIC
COSN29401476 2918 COSMIC
COSN23741199 2936 COSMIC
COSN17874884 3016 COSMIC
rs75561433 2025 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs564943542 1 dbSNP
rs1276184416 5 dbSNP
rs188542706 7 dbSNP
rs1172152620 9 dbSNP
rs374124185 14 dbSNP
rs1400332065 15 dbSNP
rs1467284677 18 dbSNP
rs746648886 20 dbSNP
rs572491271 21 dbSNP
rs768280985 23 dbSNP
rs923538908 24 dbSNP
rs1043776157 28 dbSNP
rs758021600 30 dbSNP
rs904120724 33 dbSNP
rs999691598 36 dbSNP
rs1232246083 43 dbSNP
rs1331408531 45 dbSNP
rs1272781681 47 dbSNP
rs1319516970 50 dbSNP
rs779576318 51 dbSNP
rs1201793372 59 dbSNP
rs1361959127 60 dbSNP
rs192562744 66 dbSNP
rs960831091 76 dbSNP
rs1486756792 77 dbSNP
rs559870738 78 dbSNP
rs1308978921 101 dbSNP
rs1050576202 104 dbSNP
rs1468044283 108 dbSNP
rs569891713 110 dbSNP
rs914741772 115 dbSNP
rs1023746267 117 dbSNP
rs969876543 118 dbSNP
rs947490175 128 dbSNP
rs1385443741 129 dbSNP
rs1041811676 145 dbSNP
rs903226697 148 dbSNP
rs1289899857 149 dbSNP
rs1343463573 150 dbSNP
rs770963822 150 dbSNP
rs1397227872 156 dbSNP
rs1470370243 162 dbSNP
rs1428840687 169 dbSNP
rs1304283047 173 dbSNP
rs1002893650 175 dbSNP
rs1262181777 189 dbSNP
rs1185810712 191 dbSNP
rs1057125490 193 dbSNP
rs535624240 205 dbSNP
rs1240468389 206 dbSNP
rs1229166233 215 dbSNP
rs1309576402 221 dbSNP
rs1270578139 240 dbSNP
rs1296775367 241 dbSNP
rs879211839 255 dbSNP
rs1295245363 257 dbSNP
rs896432589 274 dbSNP
rs549181236 279 dbSNP
rs1363611952 280 dbSNP
rs1174471774 304 dbSNP
rs33975324 304 dbSNP
rs1463740364 305 dbSNP
rs1012168494 309 dbSNP
rs1203454028 309 dbSNP
rs1184207902 310 dbSNP
rs944553050 310 dbSNP
rs200111474 311 dbSNP
rs5835552 311 dbSNP
rs1263943194 312 dbSNP
rs869271535 312 dbSNP
rs201284261 313 dbSNP
rs1382059744 320 dbSNP
rs921736208 320 dbSNP
rs1006428074 335 dbSNP
rs1397457495 338 dbSNP
rs1297879213 359 dbSNP
rs931690616 366 dbSNP
rs1014697354 371 dbSNP
rs1386867041 373 dbSNP
rs1175529023 387 dbSNP
rs1043400891 393 dbSNP
rs757452826 395 dbSNP
rs1382813964 398 dbSNP
rs776432935 399 dbSNP
rs1249370264 400 dbSNP
rs1182734442 413 dbSNP
rs371911954 414 dbSNP
rs1414113945 415 dbSNP
rs1241259318 419 dbSNP
rs1282993851 419 dbSNP
rs552120206 419 dbSNP
rs759457072 419 dbSNP
rs896726254 419 dbSNP
rs527298420 421 dbSNP
rs1367156761 423 dbSNP
rs953668259 427 dbSNP
rs986336475 429 dbSNP
rs914773001 431 dbSNP
rs951333462 435 dbSNP
rs1175483831 440 dbSNP
rs1470137092 444 dbSNP
rs548745467 444 dbSNP
rs907829663 446 dbSNP
rs537129410 449 dbSNP
rs550514122 452 dbSNP
rs975948763 452 dbSNP
rs1269202950 453 dbSNP
rs921722294 460 dbSNP
rs931766915 462 dbSNP
rs1288346176 464 dbSNP
rs1391475394 464 dbSNP
rs1043835883 466 dbSNP
rs1290699314 468 dbSNP
rs1260244951 470 dbSNP
rs1226760027 471 dbSNP
rs947581596 472 dbSNP
rs1329137496 474 dbSNP
rs546939089 474 dbSNP
rs935020287 474 dbSNP
rs1042255397 475 dbSNP
rs1320136901 476 dbSNP
rs1344201460 476 dbSNP
rs568249551 479 dbSNP
rs1415270729 485 dbSNP
rs1156275856 487 dbSNP
rs1198325696 492 dbSNP
rs1223245472 492 dbSNP
rs1470697816 492 dbSNP
rs924731128 495 dbSNP
rs557465320 496 dbSNP
rs896778652 497 dbSNP
rs1448114627 501 dbSNP
rs1202780834 513 dbSNP
rs1261693075 515 dbSNP
rs1206883380 516 dbSNP
rs1325830289 519 dbSNP
rs938734777 525 dbSNP
rs1263912550 529 dbSNP
rs1250976071 547 dbSNP
rs146315383 554 dbSNP
rs1271744639 561 dbSNP
rs1431252503 562 dbSNP
rs1207413149 574 dbSNP
rs1325761969 577 dbSNP
rs1057195058 578 dbSNP
rs1454115517 579 dbSNP
rs1406179500 592 dbSNP
rs574199546 594 dbSNP
rs1253837130 603 dbSNP
rs1412424240 612 dbSNP
rs1169979575 621 dbSNP
rs151192065 621 dbSNP
rs894473602 621 dbSNP
rs1475976348 622 dbSNP
rs1390092490 625 dbSNP
rs1187229893 629 dbSNP
rs1198394775 638 dbSNP
rs1012889188 640 dbSNP
rs995618480 655 dbSNP
rs1044991806 658 dbSNP
rs887669875 674 dbSNP
rs1214926386 675 dbSNP
rs887173159 675 dbSNP
rs1295227823 676 dbSNP
rs1004248850 680 dbSNP
rs374924729 680 dbSNP
rs1006069223 699 dbSNP
rs1382826269 700 dbSNP
rs1019592317 706 dbSNP
rs748697662 710 dbSNP
rs965991694 717 dbSNP
rs1329200552 720 dbSNP
rs1410879332 728 dbSNP
rs1429779533 731 dbSNP
rs542804423 733 dbSNP
rs1167203816 734 dbSNP
rs1447006379 744 dbSNP
rs559592298 745 dbSNP
rs897604909 753 dbSNP
rs997217037 757 dbSNP
rs976380165 762 dbSNP
rs1471883999 763 dbSNP
rs1234811872 766 dbSNP
rs1029986687 767 dbSNP
rs1482572944 775 dbSNP
rs953054745 777 dbSNP
rs953361034 780 dbSNP
rs979214686 782 dbSNP
rs1404937035 783 dbSNP
rs1294488352 784 dbSNP
rs1370103042 788 dbSNP
rs62173760 790 dbSNP
rs1021896276 795 dbSNP
rs1308334606 801 dbSNP
rs1226107073 804 dbSNP
rs1230663114 810 dbSNP
rs1289746518 816 dbSNP
rs1489835863 820 dbSNP
rs1221565965 826 dbSNP
rs758222237 831 dbSNP
rs1426999101 834 dbSNP
rs977645196 843 dbSNP
rs1164775854 848 dbSNP
rs1403611034 851 dbSNP
rs924754470 862 dbSNP
rs1410275361 866 dbSNP
rs917546537 867 dbSNP
rs1472406087 873 dbSNP
rs1249944016 875 dbSNP
rs949680171 879 dbSNP
rs1045695829 886 dbSNP
rs1184591644 900 dbSNP
rs938783806 901 dbSNP
rs545328336 903 dbSNP
rs1048584827 906 dbSNP
rs887197658 912 dbSNP
rs1284396091 915 dbSNP
rs1004260303 916 dbSNP
rs1019644836 917 dbSNP
rs1284823442 922 dbSNP
rs544337364 930 dbSNP
rs1346613570 936 dbSNP
rs915959432 937 dbSNP
rs1456883922 946 dbSNP
rs1347006505 948 dbSNP
rs1159870007 955 dbSNP
rs948718653 960 dbSNP
rs1169681867 962 dbSNP
rs1456796902 967 dbSNP
rs1166037484 971 dbSNP
rs765157812 974 dbSNP
rs1178853702 977 dbSNP
rs1048847856 981 dbSNP
rs996843414 982 dbSNP
rs1429012527 1004 dbSNP
rs1266476905 1014 dbSNP
rs1486785605 1027 dbSNP
rs67902767 1027 dbSNP
rs1242658476 1034 dbSNP
rs1366174918 1038 dbSNP
rs941925090 1039 dbSNP
rs1326467919 1042 dbSNP
rs1264612521 1045 dbSNP
rs1223808576 1050 dbSNP
rs1313125922 1052 dbSNP
rs1437619428 1058 dbSNP
rs1313192796 1065 dbSNP
rs1385481440 1065 dbSNP
rs1364636511 1073 dbSNP
rs1289979315 1078 dbSNP
rs1434375931 1083 dbSNP
rs1386627227 1084 dbSNP
rs1036239973 1087 dbSNP
rs1246830824 1097 dbSNP
rs1290452720 1102 dbSNP
rs897653970 1109 dbSNP
rs1433479105 1112 dbSNP
rs763319757 1118 dbSNP
rs1173640578 1120 dbSNP
rs997267993 1121 dbSNP
rs1430099422 1122 dbSNP
rs1420062038 1125 dbSNP
rs748054729 1130 dbSNP
rs1463150782 1133 dbSNP
rs979270390 1138 dbSNP
rs1203873789 1139 dbSNP
rs1032103115 1141 dbSNP
rs1253901951 1146 dbSNP
rs1231445330 1152 dbSNP
rs1309635268 1159 dbSNP
rs1298981595 1160 dbSNP
rs1228380355 1161 dbSNP
rs1363085710 1163 dbSNP
rs764401509 1167 dbSNP
rs1396702440 1173 dbSNP
rs751757515 1179 dbSNP
rs1401697474 1195 dbSNP
rs777369446 1196 dbSNP
rs1301323864 1197 dbSNP
rs757289218 1197 dbSNP
rs767577439 1201 dbSNP
rs1463330130 1203 dbSNP
rs1354955022 1207 dbSNP
rs1007239806 1208 dbSNP
rs1447626860 1212 dbSNP
rs1213355206 1214 dbSNP
rs1422739209 1216 dbSNP
rs530554786 1216 dbSNP
rs1253557247 1237 dbSNP
rs969019794 1244 dbSNP
rs1481814111 1258 dbSNP
rs1275853714 1259 dbSNP
rs184744339 1269 dbSNP
rs1190035384 1272 dbSNP
rs1317796393 1283 dbSNP
rs917604234 1303 dbSNP
rs1340018491 1304 dbSNP
rs1031894826 1307 dbSNP
rs1310834101 1314 dbSNP
rs949101777 1316 dbSNP
rs560614176 1323 dbSNP
rs1350849712 1324 dbSNP
rs1307134898 1334 dbSNP
rs1427602833 1349 dbSNP
rs1367305233 1370 dbSNP
rs980446540 1371 dbSNP
rs1366260715 1373 dbSNP
rs777396425 1373 dbSNP
rs1416554045 1376 dbSNP
rs1183502110 1384 dbSNP
rs926908651 1389 dbSNP
rs1419266585 1394 dbSNP
rs960198294 1403 dbSNP
rs1399518305 1404 dbSNP
rs992973120 1410 dbSNP
rs1482282728 1411 dbSNP
rs1294585223 1423 dbSNP
rs1211022343 1424 dbSNP
rs188288955 1434 dbSNP
rs1263799425 1435 dbSNP
rs1048596962 1436 dbSNP
rs1330031936 1439 dbSNP
rs948804491 1445 dbSNP
rs984163726 1461 dbSNP
rs909873931 1464 dbSNP
rs941991179 1467 dbSNP
rs1407691722 1473 dbSNP
rs1324109247 1475 dbSNP
rs1347238089 1475 dbSNP
rs549116057 1487 dbSNP
rs897704805 1498 dbSNP
rs750918047 1502 dbSNP
rs1457326754 1504 dbSNP
rs997292943 1506 dbSNP
rs1156594049 1513 dbSNP
rs146206742 1516 dbSNP
rs1448808411 1524 dbSNP
rs1451498391 1525 dbSNP
rs889040625 1529 dbSNP
rs1206913009 1534 dbSNP
rs1000701124 1537 dbSNP
rs780435806 1541 dbSNP
rs1226853550 1544 dbSNP
rs1381234456 1545 dbSNP
rs1032157247 1555 dbSNP
rs1267437568 1559 dbSNP
rs1320214608 1560 dbSNP
rs1329534492 1560 dbSNP
rs956511010 1562 dbSNP
rs770618098 1563 dbSNP
rs1007702667 1567 dbSNP
rs1318097441 1570 dbSNP
rs1009343015 1574 dbSNP
rs1425471040 1578 dbSNP
rs1025168894 1580 dbSNP
rs1477913022 1590 dbSNP
rs200623823 1594 dbSNP
rs1460629030 1596 dbSNP
rs1191125513 1597 dbSNP
rs1979004 1597 dbSNP
rs1238761844 1598 dbSNP
rs1247543047 1604 dbSNP
rs1207019120 1605 dbSNP
rs1469049307 1605 dbSNP
rs758103449 1608 dbSNP
rs1279623067 1610 dbSNP
rs1413371056 1643 dbSNP
rs1199601902 1648 dbSNP
rs1342696216 1649 dbSNP
rs776492156 1659 dbSNP
rs998493903 1660 dbSNP
rs180855418 1668 dbSNP
rs1294718067 1691 dbSNP
rs952957952 1693 dbSNP
rs1405590064 1694 dbSNP
rs137941797 1705 dbSNP
rs537410957 1708 dbSNP
rs1400585395 1709 dbSNP
rs1171006363 1720 dbSNP
rs908779133 1721 dbSNP
rs1186692294 1724 dbSNP
rs960250752 1727 dbSNP
rs1238267481 1735 dbSNP
rs1209755585 1742 dbSNP
rs769757178 1754 dbSNP
rs1441586195 1758 dbSNP
rs1041212650 1759 dbSNP
rs1287596519 1762 dbSNP
rs1020161263 1766 dbSNP
rs557403801 1772 dbSNP
rs1205648433 1774 dbSNP
rs1341311645 1775 dbSNP
rs746602046 1776 dbSNP
rs922710718 1780 dbSNP
rs1023122181 1789 dbSNP
rs1379346903 1795 dbSNP
rs1283223790 1799 dbSNP
rs567715533 1810 dbSNP
rs984606216 1822 dbSNP
rs1343836861 1825 dbSNP
rs1310190484 1828 dbSNP
rs1430824310 1832 dbSNP
rs1370418350 1834 dbSNP
rs1167339103 1838 dbSNP
rs1407143914 1842 dbSNP
rs909932867 1848 dbSNP
rs770359907 1853 dbSNP
rs1200744637 1861 dbSNP
rs1181467218 1869 dbSNP
rs961677588 1892 dbSNP
rs1471911581 1895 dbSNP
rs1280304324 1896 dbSNP
rs972683462 1908 dbSNP
rs1000753510 1911 dbSNP
rs919188330 1911 dbSNP
rs1249524027 1915 dbSNP
rs1223749340 1918 dbSNP
rs775393321 1922 dbSNP
rs776154778 1924 dbSNP
rs1226145330 1926 dbSNP
rs1352326823 1928 dbSNP
rs762976425 1930 dbSNP
rs892366357 1932 dbSNP
rs1253126183 1934 dbSNP
rs1009395351 1937 dbSNP
rs763888774 1940 dbSNP
rs750529587 1958 dbSNP
rs943183268 1959 dbSNP
rs1429103934 1963 dbSNP
rs745835412 1966 dbSNP
rs536790956 1968 dbSNP
rs1414376370 1969 dbSNP
rs1160267115 1970 dbSNP
rs1174473964 1973 dbSNP
rs1249408354 1983 dbSNP
rs1417666856 1985 dbSNP
rs1218663110 1988 dbSNP
rs1246072522 1988 dbSNP
rs1488742227 1988 dbSNP
rs1465918637 2001 dbSNP
rs1268358334 2002 dbSNP
rs1409416168 2003 dbSNP
rs1328876929 2011 dbSNP
rs970884821 2012 dbSNP
rs1221316834 2013 dbSNP
rs1368850598 2014 dbSNP
rs1043201524 2020 dbSNP
rs1293465434 2024 dbSNP
rs75561433 2025 dbSNP
rs775487546 2029 dbSNP
rs998941258 2031 dbSNP
rs185033217 2036 dbSNP
rs1330232104 2040 dbSNP
rs1233734005 2044 dbSNP
rs1433568874 2045 dbSNP
rs1424372400 2047 dbSNP
rs952386255 2055 dbSNP
rs1450774175 2060 dbSNP
rs766433209 2062 dbSNP
rs1207592246 2063 dbSNP
rs1463231740 2082 dbSNP
rs539877373 2085 dbSNP
rs896094701 2085 dbSNP
rs1313220588 2087 dbSNP
rs573028374 2088 dbSNP
rs547614910 2089 dbSNP
rs1274803467 2095 dbSNP
rs1232804145 2097 dbSNP
rs1023175945 2098 dbSNP
rs544952282 2103 dbSNP
rs1005676830 2109 dbSNP
rs1017451332 2113 dbSNP
rs985534526 2116 dbSNP
rs1386651751 2120 dbSNP
rs763915097 2127 dbSNP
rs1267284975 2129 dbSNP
rs961453897 2130 dbSNP
rs972735961 2137 dbSNP
rs1173835975 2145 dbSNP
rs1451212880 2146 dbSNP
rs936028977 2147 dbSNP
rs1053047219 2148 dbSNP
rs1447136700 2161 dbSNP
rs922585504 2164 dbSNP
rs542604898 2165 dbSNP
rs1483769459 2183 dbSNP
rs149461528 2185 dbSNP
rs906335823 2188 dbSNP
rs1344871882 2190 dbSNP
rs1275989457 2198 dbSNP
rs1002431540 2213 dbSNP
rs1324823344 2218 dbSNP
rs1315084781 2219 dbSNP
rs754110276 2222 dbSNP
rs1396874227 2229 dbSNP
rs1378764202 2230 dbSNP
rs1310797090 2232 dbSNP
rs910430834 2233 dbSNP
rs1371020496 2235 dbSNP
rs534207263 2243 dbSNP
rs943216033 2245 dbSNP
rs1422829218 2246 dbSNP
rs1042868028 2254 dbSNP
rs772724336 2255 dbSNP
rs776026086 2255 dbSNP
rs925723914 2255 dbSNP
rs1422838332 2259 dbSNP
rs767526596 2263 dbSNP
rs1484242559 2264 dbSNP
rs1253157185 2267 dbSNP
rs1205140967 2269 dbSNP
rs1337499033 2282 dbSNP
rs1267263528 2290 dbSNP
rs1245647668 2293 dbSNP
rs555325284 2302 dbSNP
rs1387103028 2304 dbSNP
rs543765063 2305 dbSNP
rs755164643 2306 dbSNP
rs1052811489 2307 dbSNP
rs189489848 2308 dbSNP
rs1350945175 2309 dbSNP
rs1324306413 2311 dbSNP
rs868173893 2316 dbSNP
rs537786089 2318 dbSNP
rs1389642732 2320 dbSNP
rs1392832843 2320 dbSNP
rs961626966 2321 dbSNP
rs1456977756 2323 dbSNP
rs1343603044 2324 dbSNP
rs539978013 2329 dbSNP
rs1044669085 2333 dbSNP
rs906088559 2334 dbSNP
rs1006144926 2335 dbSNP
rs1243164808 2342 dbSNP
rs1030257794 2343 dbSNP
rs1436532530 2347 dbSNP
rs373802340 2348 dbSNP
rs897253767 2350 dbSNP
rs994209491 2355 dbSNP
rs143857055 2356 dbSNP
rs1464610154 2364 dbSNP
rs955377526 2365 dbSNP
rs551701113 2367 dbSNP
rs560959685 2369 dbSNP
rs1236640496 2371 dbSNP
rs1017952960 2372 dbSNP
rs1186981484 2379 dbSNP
rs148798047 2382 dbSNP
rs531234985 2385 dbSNP
rs1322105288 2389 dbSNP
rs550992653 2397 dbSNP
rs1164773346 2398 dbSNP
rs913210600 2406 dbSNP
rs1468928730 2411 dbSNP
rs1379876396 2418 dbSNP
rs1200270957 2420 dbSNP
rs945298319 2424 dbSNP
rs1251257894 2431 dbSNP
rs1210704505 2433 dbSNP
rs1465473464 2434 dbSNP
rs1267757810 2435 dbSNP
rs1203082571 2440 dbSNP
rs1346938239 2449 dbSNP
rs1275354650 2462 dbSNP
rs1046336591 2466 dbSNP
rs906421494 2467 dbSNP
rs1299121662 2468 dbSNP
rs1435210008 2469 dbSNP
rs1363926364 2474 dbSNP
rs1315868287 2475 dbSNP
rs1399310357 2484 dbSNP
rs2591159 2485 dbSNP
rs1320749204 2487 dbSNP
rs755336430 2491 dbSNP
rs1449796968 2500 dbSNP
rs531456872 2501 dbSNP
rs888203831 2503 dbSNP
rs536730653 2505 dbSNP
rs544671881 2512 dbSNP
rs1450168458 2513 dbSNP
rs1241737737 2533 dbSNP
rs1005265891 2534 dbSNP
rs1443904164 2535 dbSNP
rs2652421 2537 dbSNP
rs1345577081 2540 dbSNP
rs1276699421 2542 dbSNP
rs1247712251 2553 dbSNP
rs1228490529 2555 dbSNP
rs566872931 2556 dbSNP
rs1268023602 2557 dbSNP
rs746660627 2558 dbSNP
rs1328846329 2564 dbSNP
rs1209775105 2573 dbSNP
rs1450989885 2573 dbSNP
rs1166263822 2574 dbSNP
rs1171108867 2574 dbSNP
rs1186882980 2574 dbSNP
rs1205845314 2574 dbSNP
rs1229557807 2574 dbSNP
rs1233048202 2574 dbSNP
rs1238285541 2574 dbSNP
rs1270221855 2574 dbSNP
rs1283239166 2574 dbSNP
rs1306371338 2574 dbSNP
rs1310362827 2574 dbSNP
rs1340727605 2574 dbSNP
rs1340808947 2574 dbSNP
rs1354494071 2574 dbSNP
rs1356539844 2574 dbSNP
rs1374106389 2574 dbSNP
rs1411013168 2574 dbSNP
rs1414563900 2574 dbSNP
rs1414799821 2574 dbSNP
rs1418953033 2574 dbSNP
rs1430468391 2574 dbSNP
rs1473872105 2574 dbSNP
rs1484606987 2574 dbSNP
rs201802465 2574 dbSNP
rs70983747 2574 dbSNP
rs771625131 2574 dbSNP
rs879212382 2574 dbSNP
rs13035434 2575 dbSNP
rs1164555299 2586 dbSNP
rs1270213892 2590 dbSNP
rs1460187825 2591 dbSNP
rs958036834 2593 dbSNP
rs1257030613 2594 dbSNP
rs1012671852 2596 dbSNP
rs1189457749 2599 dbSNP
rs1409691448 2602 dbSNP
rs1472117591 2603 dbSNP
rs1413959819 2604 dbSNP
rs1182674018 2610 dbSNP
rs1480239789 2611 dbSNP
rs1159687164 2612 dbSNP
rs1390360015 2614 dbSNP
rs1467964699 2615 dbSNP
rs1349769171 2616 dbSNP
rs1301750707 2617 dbSNP
rs1439887995 2619 dbSNP
rs1397285332 2621 dbSNP
rs1305431483 2622 dbSNP
rs1333107418 2624 dbSNP
rs1350455914 2625 dbSNP
rs1229371105 2626 dbSNP
rs1290661546 2627 dbSNP
rs1321665880 2628 dbSNP
rs140077135 2629 dbSNP
rs1256822451 2630 dbSNP
rs1484247176 2632 dbSNP
rs1194178641 2633 dbSNP
rs1249494708 2635 dbSNP
rs1482718163 2640 dbSNP
rs1350589917 2642 dbSNP
rs1325438954 2649 dbSNP
rs1182619011 2650 dbSNP
rs35823008 2653 dbSNP
rs1414001439 2654 dbSNP
rs147315040 2655 dbSNP
rs148530488 2657 dbSNP
rs70983748 2657 dbSNP
rs778070839 2658 dbSNP
rs113622310 2659 dbSNP
rs896797412 2664 dbSNP
rs2218503 2676 dbSNP
rs1405697370 2680 dbSNP
rs756906008 2688 dbSNP
rs998247465 2697 dbSNP
rs1305693510 2698 dbSNP
rs1211312055 2699 dbSNP
rs1465932040 2713 dbSNP
rs34983024 2716 dbSNP
rs2197485 2732 dbSNP
rs1370469014 2736 dbSNP
rs780618902 2737 dbSNP
rs1316757643 2738 dbSNP
rs575145501 2740 dbSNP
rs1282748228 2742 dbSNP
rs1411046706 2745 dbSNP
rs1029939857 2747 dbSNP
rs1372405595 2749 dbSNP
rs954441201 2757 dbSNP
rs1007095689 2758 dbSNP
rs145477506 2767 dbSNP
rs1310392932 2774 dbSNP
rs1343958690 2775 dbSNP
rs1033107991 2776 dbSNP
rs1178103487 2776 dbSNP
rs1343266932 2776 dbSNP
rs957468670 2781 dbSNP
rs554132817 2784 dbSNP
rs542607354 2802 dbSNP
rs1225310230 2803 dbSNP
rs916961307 2810 dbSNP
rs574127551 2813 dbSNP
rs949715334 2825 dbSNP
rs1248245938 2830 dbSNP
rs539866217 2833 dbSNP
rs913303923 2836 dbSNP
rs1044036773 2842 dbSNP
rs971444384 2845 dbSNP
rs1259294324 2851 dbSNP
rs1212713595 2853 dbSNP
rs1349155362 2854 dbSNP
rs560161506 2860 dbSNP
rs981846760 2861 dbSNP
rs1232171567 2862 dbSNP
rs745374336 2872 dbSNP
rs1344476284 2876 dbSNP
rs927936371 2877 dbSNP
rs1381905236 2880 dbSNP
rs941602725 2895 dbSNP
rs1038981856 2904 dbSNP
rs181185021 2922 dbSNP
rs1171751916 2925 dbSNP
rs1487355654 2927 dbSNP
rs1431082256 2929 dbSNP
rs1054966144 2943 dbSNP
rs1169177445 2944 dbSNP
rs994261806 2946 dbSNP
rs1257855064 2948 dbSNP
rs1029721262 2954 dbSNP
rs1183892692 2961 dbSNP
rs1257415050 2966 dbSNP
rs545540309 2970 dbSNP
rs565386136 2971 dbSNP
rs1209412211 2972 dbSNP
rs1484059430 2982 dbSNP
rs891181935 2988 dbSNP
rs1006876256 2996 dbSNP
rs941103252 2997 dbSNP
rs186821221 3006 dbSNP
rs1166167652 3007 dbSNP
rs1226812269 3009 dbSNP
rs1305922221 3013 dbSNP
rs1316374181 3014 dbSNP
rs1315189213 3029 dbSNP
rs1233664212 3036 dbSNP
rs769922738 3038 dbSNP
rs1310966210 3039 dbSNP
rs1429839486 3039 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 3760.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 3760.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000295101.2 | 3UTR | AUGUAUACACACAUAUACAUAUAUAUAUACACAUACAUACACAUACAUACAUACAUACAUAUAUAUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000295101.2 | 3UTR | UAUACACACAUAUACAUAUAUAUAUACACAUACAUACACAUACAUACAUACAUACAUAUAUAUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
LUSC -0.427 0.06 -0.321 0.12 15 Click to see details
BLCA -0.698 0.06 -0.657 0.08 6 Click to see details
STAD 0.874 0.16 1.000 0.5 3 Click to see details
LIHC -0.585 0.21 -0.400 0.3 4 Click to see details
UCEC 0.449 0.35 0.500 0.33 3 Click to see details
HNSC -0.072 0.4 -0.279 0.17 14 Click to see details
BRCA 0.031 0.43 0.008 0.48 31 Click to see details
BRCA 0.031 0.43 0.008 0.48 31 Click to see details
BRCA 0.031 0.43 0.008 0.48 31 Click to see details
BRCA 0.031 0.43 0.008 0.48 31 Click to see details
BRCA 0.031 0.43 0.008 0.48 31 Click to see details
BRCA 0.031 0.43 0.008 0.48 31 Click to see details
BRCA 0.031 0.43 0.008 0.48 31 Click to see details
80 hsa-miR-2115-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057089 DDIT4 DNA damage inducible transcript 4 2 2
MIRT071216 FCF1 FCF1, rRNA-processing protein 2 2
MIRT226901 RAD23B RAD23 homolog B, nucleotide excision repair protein 2 2
MIRT235961 BACH1 BTB domain and CNC homolog 1 2 2
MIRT294569 ZNF460 zinc finger protein 460 2 4
MIRT321046 RAC1 Rac family small GTPase 1 2 4
MIRT359666 NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit 2 8
MIRT366451 KLHL15 kelch like family member 15 2 2
MIRT405375 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT441794 TCEAL5 transcription elongation factor A like 5 2 2
MIRT443295 TCEAL3 transcription elongation factor A like 3 2 2
MIRT455275 DDX39B DExD-box helicase 39B 2 2
MIRT458523 C5orf22 chromosome 5 open reading frame 22 2 2
MIRT464960 TWIST1 twist family bHLH transcription factor 1 2 2
MIRT466848 STX6 syntaxin 6 2 2
MIRT469252 RHOB ras homolog family member B 2 2
MIRT469825 RAB14 RAB14, member RAS oncogene family 2 4
MIRT470047 PTGFRN prostaglandin F2 receptor inhibitor 2 2
MIRT471420 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT472024 NPM1 nucleophosmin 1 2 2
MIRT484156 CENPN centromere protein N 2 2
MIRT485490 HMGN2 high mobility group nucleosomal binding domain 2 2 2
MIRT490462 PROSER2 proline and serine rich 2 2 2
MIRT493069 MTCH1 mitochondrial carrier 1 2 2
MIRT493573 HSP90AA1 heat shock protein 90 alpha family class A member 1 2 8
MIRT494919 NDUFC2-KCTD14 NDUFC2-KCTD14 readthrough 2 2
MIRT500439 ZMAT3 zinc finger matrin-type 3 2 2
MIRT500931 SRPR SRP receptor alpha subunit 2 4
MIRT501551 POC1B-GALNT4 POC1B-GALNT4 readthrough 2 2
MIRT501809 NEURL1B neuralized E3 ubiquitin protein ligase 1B 2 2
MIRT502415 GALNT4 polypeptide N-acetylgalactosaminyltransferase 4 2 2
MIRT506504 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 2
MIRT507861 CCNE2 cyclin E2 2 2
MIRT510511 YOD1 YOD1 deubiquitinase 2 6
MIRT516073 RAB42 RAB42, member RAS oncogene family 2 2
MIRT519030 KYNU kynureninase 2 6
MIRT521762 PPIL1 peptidylprolyl isomerase like 1 2 4
MIRT522898 KCNJ3 potassium voltage-gated channel subfamily J member 3 2 4
MIRT527370 MGARP mitochondria localized glutamic acid rich protein 2 2
MIRT530691 C8orf46 chromosome 8 open reading frame 46 2 2
MIRT530867 TRUB1 TruB pseudouridine synthase family member 1 2 2
MIRT531832 MTPAP mitochondrial poly(A) polymerase 2 4
MIRT533035 ZBTB5 zinc finger and BTB domain containing 5 2 2
MIRT533165 WIPF2 WAS/WASL interacting protein family member 2 2 2
MIRT533464 TRIM71 tripartite motif containing 71 2 2
MIRT534331 SHCBP1 SHC binding and spindle associated 1 2 2
MIRT539372 ADSS adenylosuccinate synthase 2 6
MIRT545951 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT553283 TSR1 TSR1, ribosome maturation factor 2 2
MIRT553532 TMEM185B transmembrane protein 185B 2 4
MIRT556480 LIPA lipase A, lysosomal acid type 2 2
MIRT556975 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT557697 GATA6 GATA binding protein 6 2 2
MIRT558901 CCDC58 coiled-coil domain containing 58 2 2
MIRT559224 BLMH bleomycin hydrolase 2 2
MIRT559827 SLPI secretory leukocyte peptidase inhibitor 2 2
MIRT563435 SLC3A2 solute carrier family 3 member 2 2 2
MIRT569270 PCDH11X protocadherin 11 X-linked 2 2
MIRT571386 JKAMP JNK1/MAPK8-associated membrane protein 2 2
MIRT572567 AFF1 AF4/FMR2 family member 1 2 2
MIRT610400 AR androgen receptor 2 2
MIRT611058 ZNF621 zinc finger protein 621 2 2
MIRT635118 TMEM233 transmembrane protein 233 2 2
MIRT641617 DEFB118 defensin beta 118 2 2
MIRT642146 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT647295 C8orf33 chromosome 8 open reading frame 33 2 2
MIRT648155 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT652780 TENM3 teneurin transmembrane protein 3 2 2
MIRT657356 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 2 2
MIRT658718 ELN elastin 2 2
MIRT662441 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT665302 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT699898 RUNX1 runt related transcription factor 1 2 2
MIRT700921 PDS5A PDS5 cohesin associated factor A 2 2
MIRT700992 PDE3A phosphodiesterase 3A 2 2
MIRT707397 DCAF4L1 DDB1 and CUL4 associated factor 4 like 1 2 2
MIRT711895 INSIG2 insulin induced gene 2 2 2
MIRT712072 XRCC5 X-ray repair cross complementing 5 2 2
MIRT716121 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT724470 SMAD2 SMAD family member 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-2115 Docetaxel+Cisplatin+5-Fluorouracil sensitive tissue (hypopharyngeal squamous cell carcinoma)
hsa-mir-2115 Decitabine 451668 approved sensitive tissue (esopheageal cancer)
hsa-miR-2115-3p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-2115-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-2115-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-2115-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-2115-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-2115-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-2115-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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