miRTarBase - #MIRT525228


—
pre-miRNA Information
pre-miRNA hsa-mir-5189   
Genomic Coordinates chr16: 88468918 - 88469031
Description Homo sapiens miR-5189 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-5189-5p
Sequence 26| UCUGGGCACAGGCGGAUGGACAGG |49
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1253186568 1 dbSNP
rs1157467955 6 dbSNP
rs1375543253 7 dbSNP
rs188172752 9 dbSNP
rs1214792828 10 dbSNP
rs990027849 13 dbSNP
rs913161946 14 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol DPY19L3   
Synonyms -
Description dpy-19 like C-mannosyltransferase 3
Transcript NM_001172774   
Other Transcripts NM_207325   
Expression
Putative miRNA Targets on DPY19L3
3'UTR of DPY19L3
(miRNA target sites are highlighted)		 
>DPY19L3|NM_001172774|3'UTR
   1 CGCAGATTTCTGCCCAGTGTCTATTTTTGATACGGAGAAACTGCATCATGATGAAACTCAATAGATGACGTTTCCTATGT
  81 AAGTAGGTAGCCCAAACCTTCAAGCTGTGATATGAGTAAGTTCTACAGATGTTTACACAAGTGTTGCCATCTTTGAAAGC
 161 ATCTTCTACAAGCAGAAGTCTTTTTCGTTGTGTGTCTATCTTTCTCATTAATGTTCTTTAGCCTAAATGTTAACAACTTT
 241 CTAAGAGTGACCTAGAATTATGTTGTTGGAGAGAATGATGTGTGTTCCATGGATACCTGGATAGGCACATAACATGTTGG
 321 AAGATGAGCACCTGCTCAGGATTTGAAATACGTTTAATTTTCAGGTGACTTAAGACAGCTATGATTGAATCAACTAGAGA
 401 TGATGATCGACTTATTTAATATGATTTCACTGGTGAAGACCAATTGGTAGCTTTTTAAAAAGCACTTTAGTGTCCTGTTT
 481 TACCTTAAAATGTTATAATATTTTCCAGTTGTCATGCTGTCAACATTAACAAAAAAAATCATGTTAAGGCTTTGTATCAA
 561 ACATTTTGTTACACTCTGTCTGAAATGTAATGTGGAGTACTTCAGCAGTATGTGTCATGTATTGTGTGTGTCTGTGTGTG
 641 TGCATGTGCACACATGTGTTTTAATGCTGGGCACAGAAAAGTGTTACAAGTTCCATATCGTAAGTCCTTAAAGGGGCAGA
 721 AATATATGTAGCCAAGTAGAATTTATTACATTTTAGTGTTATTATTTTAAAACTTACTGATACTCTTTAACCTCTCCTGC
 801 AGTAATAGTTTTGCTTTATTTCTTACTCATTTCAATTTATTGGGTTTGCAAAATTTTGTAAACTTTTTGTGTTTTTAGCC
 881 TTTGTATTTTTTACAGCCTAGAATCTTGCAAAGTCTGAATATTTTTTAAATGTTCTATCTTAACTAGTTCACTAATACAG
 961 TATTTTTAGCAGACAGCATTTTCAGACAGCATTTTCATACCAAGTTTGACTTGTGGTCTCCAATCTTACTGGGAAGGCCC
1041 TGGTAGTGTAATTCTTTTCCTTATTAAAAGGTAACCAAGTGCCTCTAAGTCATGCTTATTTGTAAACAACAAAGAAGAGT
1121 ATATGTACCTGCTCAAAATTTTTTTGATAATCGCTTATATAATTAATTTCTAATGATGAGGACATGTAAAAGTTGCCAGT
1201 AAGAACATAGTATGCATTTAATTAAATCAAGATGGCTAATGGAATTAACTTTCTCCCCTGTTCTTGCCAGGTGGAAATGA
1281 TTTAAGCATTTCTCCTTGCAGTTGTATTGAAGTAAATTACCATAGGCATCAAGATGGCTGCATCACATTTTCAAATGATT
1361 TTATATTCAGTTGCTACTTATAAAGCAGCATTCAAAAAGTCTTTTACACTGTCATGTTGGACACAAGCAGACTCAGCTTT
1441 TATCAAAACTTGTTTAAATAAAAAATTGACAGTAGCTGGGTTATTAAATTATGCAACTGAAACTCCTGAATTATATCTTT
1521 TCTGTATCCCTTAATAAGATTGGAGACCACTGCCGTTTAGGATAATACAATAATAAAACGTTTTAATCAGTACTAAAACT
1601 TTAATTAAGCCAATAATGATGCATGCCTGTTGTAGCTGACAGCATGGGTCAGTACATCCTTCAGCGAGTGCCTTACTCTA
1681 ATTGAAACCAAGCACACGTAAGGTACAATATGTTAGACTCTGTGATTTTGTTTTCAAAATCCTCTGTTATGGCTATATTT
1761 AAATTTATTTTAAATATTCCTGTATGTATTCATCTAAGCATTTGGGCATTTGGAGTCTTAATATACAAGAAACACGTACT
1841 TAAATTTTTATGCTTATCACCGCAATGATGGCAAACAGTGATTTTTTTTTTCATAGTTTAGGTGTCATTGTTGCCAGCAC
1921 CTTTAGTGCTCAGTCTTCAGTGAAAAATATAAAGTGCCAAAAAAATCTTGCAAGACAGAATCCATACTTAACACTCTTTC
2001 CAAGACACTGTGACCATGTACAGTAGCTATTTCCTGATGACCAAATCTCTCAACGAATCATGTTATTAATAAATATTTTT
2081 AGCACTCATCAGTATTCTCCAATGTGACCTTCTCATTGGAGTACACAGAAGGAAAGCAAAGAAGAGCATCTGACTTCTAG
2161 CTCTGGCTTACAGCCTCTCTACCAGGCCGAAGCAAGAGACCCGCGGCAGCAGCTCCCCGCCACTCAGACCTGGGTGGTGA
2241 TAACCTCAAAGAATGGCTCTGTTTTCTATTGACAGAAAACCCACTTGATTTTGCTTCTGAGTTAGCAGTCAGAAGACCCT
2321 CTAAGTACAATAGAAGTGCTCTTAACGGACTCTGCCTGTGTGACTCCCAGGCCCCGGAGTCTCCATCTCTCTCGTAAGCC
2401 ACCTGCCACAGCACAGCTGGAGGCTGTTCTCTGGTGTTCTCAGCGCTCCGGCTCCCTCCCTGGAGTTGTGCACCCGTCCC
2481 AAACTCCTCCATGCAAGTTCTGCTTCCTCTTATAAGTACACAACTCAGTTAAGTATTCACATACACACAGAAAATACGGG
2561 TGTGAAAAGAAAGAATTTTCTGTAAAAATTAAGTTGAATACTTTGGTAAAAAGTGATAAAGGCTGAGTTGCCAATAAAAG
2641 TTGCTTTTAAATTAGGTGTGGCTGGGAATATTATAAGATATTGGGGAAAATATACAAATCAAGAAAATTTCTGAGCTTAG
2721 ATTGCTTCATAGATTTATTTAAGTACTCATCCCACCTTTAAAACCTCTAAACTGAGAAGAAGGGACCCAAATCATGTTAT
2801 TGGTGTGATTTATGTGAGAAGTAGAACTGTAGTCATTGGACCCTTAGGCAAAGGAAAATCCGTGTCTTTATATCAGAAGA
2881 TCGGCAAACGAATGTATATTACACAGTTTAGGTTATGATTCCCTACTTTAACCTACTTACTTTATTAAATGACCAACTAC
2961 TGATACTGATCACAATAGTTATTAGAGATTCTAATTTAGTTGGAAGGTTCTAATCACTTTCATTACAGGCATTTGAAAAA
3041 TAGGGATTCATTTCGAATATATTAGCCAGGAGCATAGTTAGATGTTACCCAGGCCATTTATCATCCTGTTAATGATGATT
3121 TTCCCGACCCTTGTGAGATCAGCGTGACAGGAGTGTGTGTGTGTGTGTGTGTTTCTGTGGGTGTGTGGTTTTGGTTGGGT
3201 GCTGCCAGGTGGCAAAGGCATATGTAAATACATCTGATCTGCATCTTTATTTCACAGTTAACTAAAAGTAAAAATGTCTA
3281 TTCTGATTCCATATTGATTTTGTCTAAGATGTAAAAATTTGAGTTCATCTTTGGCCAAAACCTACCTGAATTAACATACA
3361 AAATATTTGATTTTTAAAATTTAATTCAAATCTCAAAATCAATTAAGTATTCTCAGATCCTATATCTTGGTTAATATGCT
3441 CCCAGATACTTTAAACATGGCAACCTTTTGGCCTAAGAGAATGTTTGTTCATGGAAAAAAGCTTTTGAGATGAGAGGGTG
3521 TCTTACTTTCTTGTGGCAATTGATTTTCTGTTTTAACACCCTTTGGGTAAAATCTTGCAAAGAGCTTTTATAATTTGTTT
3601 TACTGAATTGTATGGAGATTGTATACCAAGTAAAGCTCTTTTAAATTACATAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ggACA--GGUAGGCGGA--CACGGGUCu 5'
            |||  ||| |  |:|  ||||:||| 
Target 5' atTGTTGCCAGCACCTTTAGTGCTCAGt 3'
 1907 - 1934 146.00 -19.70
2 
miRNA  3' ggacagguaggcGGACACGGGUCu 5'
                      ::| ||||||| 
Target 5' ------cgcagaTTTCTGCCCAGt 3'
 1 - 18 144.00 -13.10
3 
miRNA  3' ggacaggUAGGCGGACACGGGUCu 5'
                 ||  ||   |||:||| 
Target 5' ttggaagATGAGCACCTGCTCAGg 3'
 317 - 340 129.00 -12.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31498144 65 COSMIC
COSN30462683 75 COSMIC
COSN30471058 94 COSMIC
COSN1214231 198 COSMIC
COSN32159498 436 COSMIC
COSN6142717 496 COSMIC
COSN30228942 584 COSMIC
COSN5851015 645 COSMIC
COSN15845966 655 COSMIC
COSN31603136 1014 COSMIC
COSN31597521 1093 COSMIC
COSN31585809 1140 COSMIC
COSN31609930 1143 COSMIC
COSN31590291 1171 COSMIC
COSN16556317 1262 COSMIC
COSN31528455 1277 COSMIC
COSN31483501 1293 COSMIC
COSN8259533 1580 COSMIC
COSN30538286 1619 COSMIC
COSN5851016 1681 COSMIC
COSN31570531 1721 COSMIC
COSN22423339 1726 COSMIC
COSN7124416 1729 COSMIC
COSN28627884 1768 COSMIC
COSN31486154 1830 COSMIC
COSN16463450 1873 COSMIC
COSN31485837 2048 COSMIC
COSN25953097 2320 COSMIC
COSN6142718 2347 COSMIC
COSN4967602 2450 COSMIC
COSN9354898 2559 COSMIC
COSN6142719 2601 COSMIC
COSN16410166 2802 COSMIC
COSN1766444 3071 COSMIC
COSN23250160 3172 COSMIC
COSN24012080 3193 COSMIC
COSN7124417 3409 COSMIC
COSN22577979 3423 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs754478490 2 dbSNP
rs147390632 3 dbSNP
rs1403329793 4 dbSNP
rs752288231 6 dbSNP
rs758211502 7 dbSNP
rs200722143 13 dbSNP
rs746750386 15 dbSNP
rs762826625 18 dbSNP
rs757270350 20 dbSNP
rs1472725903 22 dbSNP
rs373585101 24 dbSNP
rs1410578247 26 dbSNP
rs559525075 30 dbSNP
rs758713246 32 dbSNP
rs536657514 34 dbSNP
rs766342099 35 dbSNP
rs748335208 44 dbSNP
rs1270103948 46 dbSNP
rs1217254881 47 dbSNP
rs772148863 49 dbSNP
rs773672833 50 dbSNP
rs767156399 51 dbSNP
rs879845599 55 dbSNP
rs1347440815 61 dbSNP
rs528636373 62 dbSNP
rs1278052300 63 dbSNP
rs967039831 66 dbSNP
rs774115184 70 dbSNP
rs950089828 71 dbSNP
rs925884512 74 dbSNP
rs935811802 76 dbSNP
rs944518949 78 dbSNP
rs1160780121 79 dbSNP
rs991339198 80 dbSNP
rs1406574786 83 dbSNP
rs1156503909 84 dbSNP
rs1473571907 85 dbSNP
rs759281286 87 dbSNP
rs936122045 96 dbSNP
rs1182688678 102 dbSNP
rs1249866027 104 dbSNP
rs549347375 113 dbSNP
rs916616822 113 dbSNP
rs1010002959 117 dbSNP
rs1230247789 127 dbSNP
rs1051033477 128 dbSNP
rs1314825129 129 dbSNP
rs1244185483 130 dbSNP
rs891002199 133 dbSNP
rs1328783911 139 dbSNP
rs767095295 169 dbSNP
rs190657835 170 dbSNP
rs752207828 172 dbSNP
rs565022371 178 dbSNP
rs1315524911 181 dbSNP
rs530841082 184 dbSNP
rs1447502535 186 dbSNP
rs1406751261 187 dbSNP
rs906516651 188 dbSNP
rs115897646 191 dbSNP
rs995282462 195 dbSNP
rs138753997 197 dbSNP
rs755580596 199 dbSNP
rs1475006650 200 dbSNP
rs1410720537 201 dbSNP
rs765715515 207 dbSNP
rs17832852 210 dbSNP
rs1410702507 214 dbSNP
rs1291365210 217 dbSNP
rs1401656235 217 dbSNP
rs1220503646 218 dbSNP
rs1344824989 222 dbSNP
rs1164620523 237 dbSNP
rs1006095815 242 dbSNP
rs1360419343 243 dbSNP
rs1348665665 244 dbSNP
rs1406801147 245 dbSNP
rs1303874489 248 dbSNP
rs574486611 248 dbSNP
rs1438040600 251 dbSNP
rs1365637888 258 dbSNP
rs147219886 261 dbSNP
rs780450335 263 dbSNP
rs1372186543 270 dbSNP
rs1170816839 274 dbSNP
rs1408299665 276 dbSNP
rs549211135 283 dbSNP
rs927314863 288 dbSNP
rs879609692 290 dbSNP
rs1268245828 295 dbSNP
rs377631240 303 dbSNP
rs1227546182 310 dbSNP
rs1287583141 315 dbSNP
rs913289302 318 dbSNP
rs1361545040 329 dbSNP
rs1281412734 332 dbSNP
rs1222546186 335 dbSNP
rs1250502934 339 dbSNP
rs997927555 346 dbSNP
rs1345668458 349 dbSNP
rs1183450017 352 dbSNP
rs1282017270 353 dbSNP
rs1233112722 354 dbSNP
rs182947897 357 dbSNP
rs1351901925 362 dbSNP
rs747397317 382 dbSNP
rs1441264166 395 dbSNP
rs966986646 399 dbSNP
rs1181668182 400 dbSNP
rs977074312 405 dbSNP
rs1032850515 411 dbSNP
rs1383892306 415 dbSNP
rs957315770 422 dbSNP
rs1174293815 431 dbSNP
rs890958809 433 dbSNP
rs1251461412 434 dbSNP
rs776449539 436 dbSNP
rs1007250224 439 dbSNP
rs1239574527 447 dbSNP
rs991846495 451 dbSNP
rs1427913236 468 dbSNP
rs755188588 470 dbSNP
rs915741259 476 dbSNP
rs1261995388 478 dbSNP
rs756606724 482 dbSNP
rs1364895795 490 dbSNP
rs1307321362 495 dbSNP
rs1390446412 495 dbSNP
rs534773659 496 dbSNP
rs371114048 498 dbSNP
rs1453303446 503 dbSNP
rs557918198 512 dbSNP
rs886820768 513 dbSNP
rs1458921458 525 dbSNP
rs781277518 526 dbSNP
rs1013337064 530 dbSNP
rs558009661 531 dbSNP
rs971576970 533 dbSNP
rs980785829 536 dbSNP
rs1034541645 542 dbSNP
rs1339371154 544 dbSNP
rs928049522 555 dbSNP
rs957381977 557 dbSNP
rs990073444 561 dbSNP
rs1260793508 571 dbSNP
rs577810896 572 dbSNP
rs1197059462 574 dbSNP
rs1273214571 575 dbSNP
rs913320228 588 dbSNP
rs1381729272 593 dbSNP
rs1312910368 603 dbSNP
rs1047097492 604 dbSNP
rs748204460 607 dbSNP
rs946172443 611 dbSNP
rs1241750684 620 dbSNP
rs1288304190 623 dbSNP
rs1351796412 623 dbSNP
rs1446975071 623 dbSNP
rs1444462232 629 dbSNP
rs910102017 629 dbSNP
rs1191122328 633 dbSNP
rs796076542 633 dbSNP
rs941614186 633 dbSNP
rs942530537 635 dbSNP
rs1040399222 639 dbSNP
rs1169756990 645 dbSNP
rs1203986125 646 dbSNP
rs537092816 652 dbSNP
rs200585115 654 dbSNP
rs898383505 654 dbSNP
rs556694271 658 dbSNP
rs1222742041 671 dbSNP
rs1358549299 677 dbSNP
rs1312561928 680 dbSNP
rs185288812 682 dbSNP
rs1407940462 688 dbSNP
rs376822054 689 dbSNP
rs542973729 691 dbSNP
rs1453118875 700 dbSNP
rs769821347 701 dbSNP
rs1304046136 703 dbSNP
rs1424253282 707 dbSNP
rs1296720092 714 dbSNP
rs1364103078 716 dbSNP
rs1170807541 717 dbSNP
rs773277328 746 dbSNP
rs1372966445 749 dbSNP
rs1191625867 761 dbSNP
rs998442515 763 dbSNP
rs886766766 786 dbSNP
rs1032630176 792 dbSNP
rs1362977660 795 dbSNP
rs1270410197 809 dbSNP
rs1199703790 810 dbSNP
rs957300896 819 dbSNP
rs1289352343 828 dbSNP
rs749277783 836 dbSNP
rs559586229 839 dbSNP
rs1250744177 843 dbSNP
rs1225140357 844 dbSNP
rs1325831954 849 dbSNP
rs1283928144 857 dbSNP
rs1198441542 864 dbSNP
rs1264625454 869 dbSNP
rs1343816419 872 dbSNP
rs1024710312 877 dbSNP
rs907384904 878 dbSNP
rs1396196740 879 dbSNP
rs573135759 886 dbSNP
rs543364670 895 dbSNP
rs865933845 901 dbSNP
rs981292599 911 dbSNP
rs1176462474 912 dbSNP
rs927997265 920 dbSNP
rs951451673 928 dbSNP
rs1247906585 930 dbSNP
rs1266385235 932 dbSNP
rs1183510655 936 dbSNP
rs1438244843 937 dbSNP
rs545174900 938 dbSNP
rs957577424 941 dbSNP
rs982898720 960 dbSNP
rs879502309 970 dbSNP
rs1222938765 972 dbSNP
rs1321458873 975 dbSNP
rs1281539357 984 dbSNP
rs1240009859 986 dbSNP
rs1335552459 987 dbSNP
rs1195388847 995 dbSNP
rs565083093 1002 dbSNP
rs941387252 1006 dbSNP
rs1039927266 1015 dbSNP
rs1455077573 1020 dbSNP
rs1020273465 1024 dbSNP
rs921531586 1031 dbSNP
rs1174471690 1038 dbSNP
rs934135236 1038 dbSNP
rs1431746577 1047 dbSNP
rs535806010 1049 dbSNP
rs1426579957 1052 dbSNP
rs530898993 1055 dbSNP
rs190148638 1056 dbSNP
rs1382661186 1065 dbSNP
rs1383907705 1068 dbSNP
rs987313372 1072 dbSNP
rs903394063 1076 dbSNP
rs998557078 1077 dbSNP
rs561126507 1084 dbSNP
rs942539503 1095 dbSNP
rs1460082656 1104 dbSNP
rs1054154591 1105 dbSNP
rs1205959074 1111 dbSNP
rs775427000 1111 dbSNP
rs1284757101 1119 dbSNP
rs892792607 1122 dbSNP
rs1278178695 1129 dbSNP
rs1248680896 1136 dbSNP
rs931253005 1139 dbSNP
rs1013012952 1140 dbSNP
rs530074124 1147 dbSNP
rs971724816 1148 dbSNP
rs3746017 1153 dbSNP
rs1383742033 1154 dbSNP
rs764144414 1160 dbSNP
rs1485172587 1171 dbSNP
rs1446272459 1183 dbSNP
rs1385619382 1199 dbSNP
rs1182982190 1207 dbSNP
rs1442639004 1225 dbSNP
rs949059867 1228 dbSNP
rs1026146088 1229 dbSNP
rs1046586168 1232 dbSNP
rs1263062066 1237 dbSNP
rs1451059699 1238 dbSNP
rs1224993450 1239 dbSNP
rs565962143 1242 dbSNP
rs1197401672 1243 dbSNP
rs950569922 1254 dbSNP
rs534862888 1257 dbSNP
rs1364634905 1259 dbSNP
rs1055926380 1267 dbSNP
rs1480912574 1270 dbSNP
rs1430874353 1274 dbSNP
rs774235847 1275 dbSNP
rs551593508 1295 dbSNP
rs759277542 1297 dbSNP
rs569395557 1298 dbSNP
rs1426159440 1302 dbSNP
rs371460104 1313 dbSNP
rs1361913679 1336 dbSNP
rs536752456 1343 dbSNP
rs556990183 1347 dbSNP
rs1421619404 1349 dbSNP
rs962718632 1356 dbSNP
rs975820900 1364 dbSNP
rs921492054 1377 dbSNP
rs934234671 1378 dbSNP
rs987051525 1382 dbSNP
rs1345727674 1385 dbSNP
rs1268648741 1388 dbSNP
rs1220664687 1390 dbSNP
rs1408903162 1410 dbSNP
rs1306734023 1412 dbSNP
rs573571820 1415 dbSNP
rs1020120217 1417 dbSNP
rs924761743 1421 dbSNP
rs934856693 1430 dbSNP
rs919787309 1453 dbSNP
rs1261784954 1471 dbSNP
rs1302113519 1483 dbSNP
rs1054106033 1493 dbSNP
rs1356310421 1494 dbSNP
rs1171138183 1501 dbSNP
rs1220315794 1507 dbSNP
rs182683143 1508 dbSNP
rs982715912 1514 dbSNP
rs908428355 1515 dbSNP
rs948375444 1518 dbSNP
rs1428903331 1532 dbSNP
rs553280588 1535 dbSNP
rs1044464458 1542 dbSNP
rs906902696 1552 dbSNP
rs1233811102 1555 dbSNP
rs538435412 1556 dbSNP
rs1181644256 1560 dbSNP
rs1436519253 1561 dbSNP
rs1255642368 1562 dbSNP
rs1002789236 1567 dbSNP
rs1224862795 1579 dbSNP
rs1026260222 1580 dbSNP
rs1282306976 1581 dbSNP
rs1057395 1593 dbSNP
rs545236695 1595 dbSNP
rs1298480241 1596 dbSNP
rs757360722 1601 dbSNP
rs1006076994 1603 dbSNP
rs1397969815 1607 dbSNP
rs1324877036 1612 dbSNP
rs148679995 1614 dbSNP
rs1428665435 1616 dbSNP
rs1174302289 1624 dbSNP
rs1367789268 1628 dbSNP
rs1421035137 1630 dbSNP
rs1422722827 1633 dbSNP
rs1409191632 1641 dbSNP
rs1176945769 1644 dbSNP
rs963126216 1667 dbSNP
rs1245564390 1686 dbSNP
rs1204853261 1693 dbSNP
rs1461433044 1693 dbSNP
rs1164922884 1694 dbSNP
rs114545981 1698 dbSNP
rs1028738063 1699 dbSNP
rs955395532 1704 dbSNP
rs986997759 1708 dbSNP
rs767520776 1709 dbSNP
rs934809197 1721 dbSNP
rs1375114211 1731 dbSNP
rs1393469647 1732 dbSNP
rs1374351189 1738 dbSNP
rs1011676740 1740 dbSNP
rs1453278465 1742 dbSNP
rs187358975 1745 dbSNP
rs1455559742 1748 dbSNP
rs1382672780 1751 dbSNP
rs561397784 1762 dbSNP
rs1346053752 1764 dbSNP
rs1057397 1768 dbSNP
rs1294591961 1769 dbSNP
rs1418320064 1795 dbSNP
rs1360185834 1822 dbSNP
rs879135681 1823 dbSNP
rs1387471290 1824 dbSNP
rs1204554017 1825 dbSNP
rs1019647532 1827 dbSNP
rs964378782 1836 dbSNP
rs554238349 1837 dbSNP
rs1481765338 1849 dbSNP
rs1486541368 1852 dbSNP
rs193183031 1862 dbSNP
rs1044193497 1863 dbSNP
rs1442700569 1866 dbSNP
rs1351321445 1868 dbSNP
rs1293590381 1881 dbSNP
rs1027050267 1882 dbSNP
rs573964055 1882 dbSNP
rs1310447766 1884 dbSNP
rs1362733180 1887 dbSNP
rs1185276481 1893 dbSNP
rs1385809176 1894 dbSNP
rs1448304762 1896 dbSNP
rs1167750060 1897 dbSNP
rs982580149 1899 dbSNP
rs1355893907 1903 dbSNP
rs1462228950 1918 dbSNP
rs183806897 1921 dbSNP
rs755907352 1922 dbSNP
rs908459021 1927 dbSNP
rs142216389 1935 dbSNP
rs1450928551 1939 dbSNP
rs1192491562 1946 dbSNP
rs938357662 1950 dbSNP
rs1270809583 1951 dbSNP
rs1384225145 1959 dbSNP
rs1222900905 1961 dbSNP
rs1355349390 1966 dbSNP
rs1047654806 1990 dbSNP
rs886359348 1992 dbSNP
rs1006023265 2001 dbSNP
rs937660611 2008 dbSNP
rs1347570190 2009 dbSNP
rs1303948047 2012 dbSNP
rs751856163 2017 dbSNP
rs1016502534 2018 dbSNP
rs1389014447 2022 dbSNP
rs1300492730 2025 dbSNP
rs1309474028 2039 dbSNP
rs1228519779 2046 dbSNP
rs1373167283 2054 dbSNP
rs900370735 2055 dbSNP
rs1476654323 2056 dbSNP
rs1459773349 2057 dbSNP
rs551657385 2061 dbSNP
rs571375577 2073 dbSNP
rs997319341 2083 dbSNP
rs1053486178 2086 dbSNP
rs755312342 2088 dbSNP
rs1028433607 2103 dbSNP
rs947564546 2116 dbSNP
rs80199352 2125 dbSNP
rs1008203449 2129 dbSNP
rs752926929 2139 dbSNP
rs1421106243 2147 dbSNP
rs956300507 2148 dbSNP
rs990452154 2149 dbSNP
rs914723932 2152 dbSNP
rs970276213 2155 dbSNP
rs1426798947 2161 dbSNP
rs755273609 2162 dbSNP
rs1329717114 2164 dbSNP
rs980246011 2172 dbSNP
rs928386644 2174 dbSNP
rs189142547 2178 dbSNP
rs1407448749 2188 dbSNP
rs1463659220 2189 dbSNP
rs1047435412 2190 dbSNP
rs1287190759 2191 dbSNP
rs1364090245 2194 dbSNP
rs1012218830 2200 dbSNP
rs996823450 2201 dbSNP
rs1477457078 2202 dbSNP
rs1027081207 2203 dbSNP
rs907572853 2204 dbSNP
rs1196665004 2205 dbSNP
rs1237541695 2205 dbSNP
rs1462768019 2206 dbSNP
rs1263765632 2213 dbSNP
rs1022389097 2215 dbSNP
rs563350353 2217 dbSNP
rs1200110005 2218 dbSNP
rs756185706 2219 dbSNP
rs1281674573 2220 dbSNP
rs562799593 2224 dbSNP
rs1376599994 2226 dbSNP
rs1282836487 2235 dbSNP
rs1321719079 2248 dbSNP
rs12975277 2250 dbSNP
rs12972589 2252 dbSNP
rs1384378979 2255 dbSNP
rs749401041 2262 dbSNP
rs1334188350 2269 dbSNP
rs1413582541 2270 dbSNP
rs1225091814 2283 dbSNP
rs1454176300 2296 dbSNP
rs982072098 2302 dbSNP
rs1176709021 2309 dbSNP
rs1446310644 2311 dbSNP
rs1033991524 2313 dbSNP
rs959044090 2315 dbSNP
rs770947795 2319 dbSNP
rs1186883831 2324 dbSNP
rs779583184 2331 dbSNP
rs1213475768 2336 dbSNP
rs1440742222 2340 dbSNP
rs989070631 2345 dbSNP
rs1243788241 2347 dbSNP
rs567334093 2348 dbSNP
rs1198105660 2350 dbSNP
rs996035531 2351 dbSNP
rs1248828904 2353 dbSNP
rs1481241908 2365 dbSNP
rs1179021343 2367 dbSNP
rs1384128698 2373 dbSNP
rs1050251057 2376 dbSNP
rs1446709830 2377 dbSNP
rs978232913 2386 dbSNP
rs1319957355 2387 dbSNP
rs891216184 2390 dbSNP
rs1400498935 2394 dbSNP
rs73569254 2395 dbSNP
rs1347493381 2397 dbSNP
rs1031627526 2400 dbSNP
rs903973846 2402 dbSNP
rs1041315936 2411 dbSNP
rs1343855777 2416 dbSNP
rs1407065243 2418 dbSNP
rs1414497949 2423 dbSNP
rs1162564017 2427 dbSNP
rs1012224519 2429 dbSNP
rs900054265 2430 dbSNP
rs932643466 2442 dbSNP
rs1488057486 2446 dbSNP
rs1372267964 2449 dbSNP
rs531467253 2451 dbSNP
rs1221879131 2452 dbSNP
rs1021906380 2459 dbSNP
rs970602541 2463 dbSNP
rs1289860230 2469 dbSNP
rs1286212768 2470 dbSNP
rs1227105694 2474 dbSNP
rs1353655184 2475 dbSNP
rs1218889653 2476 dbSNP
rs1062106 2477 dbSNP
rs928334514 2480 dbSNP
rs1406597109 2494 dbSNP
rs1350239503 2507 dbSNP
rs959768695 2508 dbSNP
rs1490738365 2510 dbSNP
rs1199614830 2514 dbSNP
rs983237791 2520 dbSNP
rs1231971953 2525 dbSNP
rs1421766340 2529 dbSNP
rs1171422979 2547 dbSNP
rs1477517186 2553 dbSNP
rs1421816191 2555 dbSNP
rs1016074139 2558 dbSNP
rs576212129 2559 dbSNP
rs1033608485 2560 dbSNP
rs941733807 2563 dbSNP
rs1274544086 2583 dbSNP
rs566090436 2587 dbSNP
rs959242706 2599 dbSNP
rs1316725233 2601 dbSNP
rs1410770526 2602 dbSNP
rs1224963714 2605 dbSNP
rs1368055705 2608 dbSNP
rs1273978084 2614 dbSNP
rs748623169 2625 dbSNP
rs1037991396 2632 dbSNP
rs771817635 2634 dbSNP
rs1363720644 2635 dbSNP
rs966331027 2642 dbSNP
rs1398193674 2644 dbSNP
rs1178862313 2649 dbSNP
rs1433932639 2657 dbSNP
rs1426639409 2659 dbSNP
rs977887252 2662 dbSNP
rs866346757 2667 dbSNP
rs911605266 2671 dbSNP
rs1198557082 2674 dbSNP
rs944230474 2675 dbSNP
rs931770782 2679 dbSNP
rs770565764 2681 dbSNP
rs1051556948 2682 dbSNP
rs538949905 2687 dbSNP
rs1312369236 2688 dbSNP
rs1277437952 2690 dbSNP
rs554861517 2691 dbSNP
rs1439716629 2692 dbSNP
rs575762020 2693 dbSNP
rs1281120991 2701 dbSNP
rs1053155705 2704 dbSNP
rs891777942 2713 dbSNP
rs1373952226 2714 dbSNP
rs1374789217 2716 dbSNP
rs878975589 2727 dbSNP
rs192144355 2732 dbSNP
rs776219648 2738 dbSNP
rs1022271205 2744 dbSNP
rs906121266 2754 dbSNP
rs775179478 2756 dbSNP
rs1245246532 2768 dbSNP
rs1174192576 2770 dbSNP
rs909904995 2775 dbSNP
rs1381309649 2785 dbSNP
rs1178575588 2788 dbSNP
rs939990491 2792 dbSNP
rs1235861004 2801 dbSNP
rs760297400 2811 dbSNP
rs1222617446 2820 dbSNP
rs1183134331 2825 dbSNP
rs1035856957 2846 dbSNP
rs1236593963 2862 dbSNP
rs745369823 2863 dbSNP
rs906576652 2874 dbSNP
rs1286398017 2878 dbSNP
rs575116378 2883 dbSNP
rs1351368026 2884 dbSNP
rs1317040535 2885 dbSNP
rs1396727182 2899 dbSNP
rs1271809964 2903 dbSNP
rs1435766800 2905 dbSNP
rs1202847085 2909 dbSNP
rs376795697 2922 dbSNP
rs1301383404 2923 dbSNP
rs1235024665 2927 dbSNP
rs1003379411 2928 dbSNP
rs1418218175 2932 dbSNP
rs1166087826 2934 dbSNP
rs1387685612 2934 dbSNP
rs1014693869 2938 dbSNP
rs1183456882 2946 dbSNP
rs1254779317 2947 dbSNP
rs963348533 2960 dbSNP
rs1383946152 2964 dbSNP
rs866431959 2968 dbSNP
rs1215684116 2972 dbSNP
rs921811369 2976 dbSNP
rs768322892 2983 dbSNP
rs1010803377 3003 dbSNP
rs987390310 3009 dbSNP
rs911707849 3029 dbSNP
rs1310593857 3030 dbSNP
rs554792039 3032 dbSNP
rs1408489986 3050 dbSNP
rs1297798066 3053 dbSNP
rs966416640 3055 dbSNP
rs1354836020 3056 dbSNP
rs1451670687 3067 dbSNP
rs1367408854 3072 dbSNP
rs1162048276 3083 dbSNP
rs1334553476 3085 dbSNP
rs1478501815 3102 dbSNP
rs1423963264 3108 dbSNP
rs770636057 3110 dbSNP
rs1476757248 3112 dbSNP
rs1210374432 3113 dbSNP
rs935195150 3114 dbSNP
rs999566043 3119 dbSNP
rs1053105212 3123 dbSNP
rs1269135799 3124 dbSNP
rs891897940 3126 dbSNP
rs1200657704 3129 dbSNP
rs544813045 3130 dbSNP
rs1277875401 3132 dbSNP
rs947341615 3134 dbSNP
rs1215889698 3137 dbSNP
rs1273285590 3138 dbSNP
rs1333203107 3140 dbSNP
rs1400386427 3153 dbSNP
rs1476604369 3153 dbSNP
rs5827802 3153 dbSNP
rs58913448 3153 dbSNP
rs776672800 3153 dbSNP
rs1379178843 3154 dbSNP
rs35801162 3154 dbSNP
rs976058706 3158 dbSNP
rs1432361319 3162 dbSNP
rs1265252124 3165 dbSNP
rs1203464175 3166 dbSNP
rs1458270830 3175 dbSNP
rs1043053743 3186 dbSNP
rs984387864 3189 dbSNP
rs1241801649 3192 dbSNP
rs1463089119 3194 dbSNP
rs1256781451 3199 dbSNP
rs910105048 3206 dbSNP
rs940043751 3221 dbSNP
rs1037399622 3225 dbSNP
rs574868921 3229 dbSNP
rs183826584 3233 dbSNP
rs1330033498 3235 dbSNP
rs1463576786 3237 dbSNP
rs1403964517 3248 dbSNP
rs1172786900 3250 dbSNP
rs1465415760 3253 dbSNP
rs186944313 3258 dbSNP
rs371029197 3265 dbSNP
rs1001767911 3271 dbSNP
rs1440180139 3272 dbSNP
rs151208255 3278 dbSNP
rs895000971 3281 dbSNP
rs895955586 3289 dbSNP
rs140276020 3292 dbSNP
rs1014641354 3295 dbSNP
rs776078969 3296 dbSNP
rs532524356 3297 dbSNP
rs1288528880 3302 dbSNP
rs999448671 3309 dbSNP
rs973595978 3312 dbSNP
rs545337856 3315 dbSNP
rs1324112146 3318 dbSNP
rs1432314864 3322 dbSNP
rs1028657652 3331 dbSNP
rs1341737167 3333 dbSNP
rs1334405083 3343 dbSNP
rs1395028374 3344 dbSNP
rs953188941 3349 dbSNP
rs1373414860 3355 dbSNP
rs1160191772 3360 dbSNP
rs1420053780 3360 dbSNP
rs769529864 3366 dbSNP
rs1322443477 3367 dbSNP
rs995949198 3369 dbSNP
rs565170775 3372 dbSNP
rs191764729 3381 dbSNP
rs17692367 3387 dbSNP
rs911822349 3388 dbSNP
rs1261726293 3395 dbSNP
rs954204548 3397 dbSNP
rs1265835230 3401 dbSNP
rs1326274169 3401 dbSNP
rs984253817 3403 dbSNP
rs935143430 3407 dbSNP
rs567289181 3415 dbSNP
rs1357860876 3423 dbSNP
rs529749378 3430 dbSNP
rs1195461455 3435 dbSNP
rs1243648286 3438 dbSNP
rs1264135538 3450 dbSNP
rs1299630585 3464 dbSNP
rs1480263953 3483 dbSNP
rs1173978876 3486 dbSNP
rs1431065955 3492 dbSNP
rs927979990 3494 dbSNP
rs1406961476 3500 dbSNP
rs915092223 3503 dbSNP
rs947490873 3506 dbSNP
rs1391573277 3508 dbSNP
rs775377426 3515 dbSNP
rs1382738461 3517 dbSNP
rs1401905757 3519 dbSNP
rs1194647300 3521 dbSNP
rs939344370 3527 dbSNP
rs1261407088 3534 dbSNP
rs1043557427 3536 dbSNP
rs527413532 3538 dbSNP
rs143734829 3540 dbSNP
rs937335634 3546 dbSNP
rs1284812773 3547 dbSNP
rs955711600 3549 dbSNP
rs1057374060 3554 dbSNP
rs1332020470 3559 dbSNP
rs916630464 3562 dbSNP
rs1218794475 3568 dbSNP
rs1339611076 3577 dbSNP
rs752066283 3578 dbSNP
rs1438565179 3583 dbSNP
rs1350443302 3585 dbSNP
rs1234452679 3591 dbSNP
rs566150963 3594 dbSNP
rs1036526206 3602 dbSNP
rs146807032 3606 dbSNP
rs1349215229 3608 dbSNP
rs8109111 3610 dbSNP
rs1193321195 3611 dbSNP
rs1478546721 3632 dbSNP
rs569509158 3633 dbSNP
rs1246700418 3636 dbSNP
rs1029189474 3637 dbSNP
rs111581328 3646 dbSNP
rs1198908469 3651 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 147991.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ggacagguaggcGGACACGGGUCu 5'
                      ::| ||||||| 
Target 5' ---------agaUUUCUGCCCAGu 3'
 		1 - 15
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000586987.1 | 3UTR | AGAUUUCUGCCCAGUGUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
177 hsa-miR-5189-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT142280 DCTN5 dynactin subunit 5 2 4
MIRT455613 SRSF3 serine and arginine rich splicing factor 3 2 2
MIRT458687 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT470847 PLXND1 plexin D1 2 2
MIRT471838 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT475228 IKZF3 IKAROS family zinc finger 3 2 4
MIRT480294 C7orf73 short transmembrane mitochondrial protein 1 2 4
MIRT483509 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT484952 ZBTB34 zinc finger and BTB domain containing 34 2 6
MIRT489295 B4GALNT4 beta-1,4-N-acetyl-galactosaminyltransferase 4 2 4
MIRT490801 PSMD3 proteasome 26S subunit, non-ATPase 3 2 2
MIRT493375 KIAA1614 KIAA1614 2 2
MIRT496408 PARVB parvin beta 2 2
MIRT497267 GRK6 G protein-coupled receptor kinase 6 2 2
MIRT497679 SYNGR1 synaptogyrin 1 2 2
MIRT498222 TLN2 talin 2 2 2
MIRT498313 BCL11B B-cell CLL/lymphoma 11B 2 2
MIRT504049 TOMM5 translocase of outer mitochondrial membrane 5 2 2
MIRT516313 F8A2 coagulation factor VIII associated 2 2 2
MIRT516339 F8A3 coagulation factor VIII associated 3 2 2
MIRT517813 UGDH UDP-glucose 6-dehydrogenase 2 6
MIRT518743 C1orf35 chromosome 1 open reading frame 35 2 2
MIRT519295 MLH1 mutL homolog 1 2 2
MIRT520387 UBB ubiquitin B 2 4
MIRT525228 DPY19L3 dpy-19 like C-mannosyltransferase 3 2 2
MIRT533147 WNT10A Wnt family member 10A 2 2
MIRT533544 TPR translocated promoter region, nuclear basket protein 2 2
MIRT533684 TMEM86A transmembrane protein 86A 2 2
MIRT534544 RUNX1 runt related transcription factor 1 2 2
MIRT539592 SSH2 slingshot protein phosphatase 2 2 2
MIRT539676 ZBTB44 zinc finger and BTB domain containing 44 2 2
MIRT539710 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT539730 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT539755 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT539787 EMC1 ER membrane protein complex subunit 1 2 4
MIRT539812 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT539995 SLC24A4 solute carrier family 24 member 4 2 2
MIRT540073 SSH3 slingshot protein phosphatase 3 2 2
MIRT540092 NPY4R neuropeptide Y receptor Y4 2 2
MIRT540428 FAM83F family with sequence similarity 83 member F 2 2
MIRT540512 CXCL10 C-X-C motif chemokine ligand 10 2 2
MIRT540531 ZNF417 zinc finger protein 417 2 2
MIRT540622 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT540909 PON1 paraoxonase 1 2 2
MIRT540990 ZNF460 zinc finger protein 460 2 4
MIRT541513 TOR1AIP1 torsin 1A interacting protein 1 2 2
MIRT541633 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT541665 ATP8B3 ATPase phospholipid transporting 8B3 2 2
MIRT541738 ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 2 2
MIRT541813 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT541904 VWA7 von Willebrand factor A domain containing 7 2 2
MIRT542004 XRCC2 X-ray repair cross complementing 2 2 2
MIRT542020 PEX2 peroxisomal biogenesis factor 2 2 2
MIRT542187 FUT1 fucosyltransferase 1 (H blood group) 2 6
MIRT542204 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542337 LIMD1 LIM domains containing 1 2 2
MIRT542426 ZNF331 zinc finger protein 331 2 2
MIRT542459 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT542494 WDR13 WD repeat domain 13 2 2
MIRT542552 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT542699 RPS15A ribosomal protein S15a 2 2
MIRT542819 PDE12 phosphodiesterase 12 2 2
MIRT552108 PPP1R1A protein phosphatase 1 regulatory inhibitor subunit 1A 2 2
MIRT555606 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 2 2
MIRT564916 YTHDF1 YTH N6-methyladenosine RNA binding protein 1 2 2
MIRT568609 ACVR2A activin A receptor type 2A 2 2
MIRT608702 GMPR guanosine monophosphate reductase 2 2
MIRT610061 MYBPC1 myosin binding protein C, slow type 2 2
MIRT610794 KLK2 kallikrein related peptidase 2 2 2
MIRT617179 GOSR2 golgi SNAP receptor complex member 2 2 2
MIRT620581 WBSCR27 methyltransferase like 27 2 4
MIRT623348 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT623873 FUS FUS RNA binding protein 2 2
MIRT625418 IMP4 IMP4, U3 small nucleolar ribonucleoprotein 2 2
MIRT630227 SORD sorbitol dehydrogenase 2 2
MIRT631870 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT631905 VEGFC vascular endothelial growth factor C 2 2
MIRT632005 POPDC2 popeye domain containing 2 2 2
MIRT632876 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT633313 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633989 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635248 ELOVL6 ELOVL fatty acid elongase 6 2 2
MIRT635258 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT635280 GK5 glycerol kinase 5 (putative) 2 2
MIRT635862 SLC11A2 solute carrier family 11 member 2 2 2
MIRT636624 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT637085 SELPLG selectin P ligand 2 2
MIRT639025 AAK1 AP2 associated kinase 1 2 2
MIRT640876 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT641928 SLC25A16 solute carrier family 25 member 16 2 2
MIRT642173 HEBP2 heme binding protein 2 2 2
MIRT642251 PAK4 p21 (RAC1) activated kinase 4 2 2
MIRT642854 RNF135 ring finger protein 135 2 2
MIRT643240 PRSS21 protease, serine 21 2 2
MIRT643375 TRIM16L tripartite motif containing 16 like 2 2
MIRT646931 MCCC2 methylcrotonoyl-CoA carboxylase 2 2 2
MIRT647803 FRMD8 FERM domain containing 8 2 2
MIRT650517 UFM1 ubiquitin fold modifier 1 2 2
MIRT651618 WASF3 WAS protein family member 3 2 2
MIRT655588 OTUD7B OTU deubiquitinase 7B 2 2
MIRT657652 GPR75 G protein-coupled receptor 75 2 2
MIRT657835 GJD3 gap junction protein delta 3 2 2
MIRT658357 FAM65B RHO family interacting cell polarization regulator 2 2 2
MIRT661173 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT661332 TBC1D15 TBC1 domain family member 15 2 2
MIRT662003 ZNF445 zinc finger protein 445 2 2
MIRT662194 MEI1 meiotic double-stranded break formation protein 1 2 2
MIRT663473 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT663958 ZNF554 zinc finger protein 554 2 2
MIRT665907 TBCCD1 TBCC domain containing 1 2 2
MIRT666029 STRN3 striatin 3 2 2
MIRT666496 SBNO1 strawberry notch homolog 1 2 2
MIRT667290 MYPN myopalladin 2 4
MIRT668020 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT670087 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT670598 LLGL1 LLGL1, scribble cell polarity complex component 2 4
MIRT670689 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT670848 SFT2D2 SFT2 domain containing 2 2 2
MIRT670981 MED17 mediator complex subunit 17 2 2
MIRT672621 IGF2R insulin like growth factor 2 receptor 2 2
MIRT673223 KLHDC8A kelch domain containing 8A 2 2
MIRT674265 ZNF284 zinc finger protein 284 2 2
MIRT675631 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT675806 MED28 mediator complex subunit 28 2 2
MIRT676337 PCCB propionyl-CoA carboxylase beta subunit 2 2
MIRT681724 KCNE4 potassium voltage-gated channel subfamily E regulatory subunit 4 2 2
MIRT682844 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT682913 FAM73A mitoguardin 1 2 2
MIRT682932 ZNF292 zinc finger protein 292 2 2
MIRT682950 RPL12 ribosomal protein L12 2 2
MIRT683030 SUSD5 sushi domain containing 5 2 2
MIRT684387 MCTS1 MCTS1, re-initiation and release factor 2 2
MIRT684687 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT687202 PLXNA3 plexin A3 2 2
MIRT689145 IRAK1BP1 interleukin 1 receptor associated kinase 1 binding protein 1 2 2
MIRT689632 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT690598 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690802 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT690943 GLG1 golgi glycoprotein 1 2 2
MIRT691850 OSCAR osteoclast associated, immunoglobulin-like receptor 2 2
MIRT693615 CENPL centromere protein L 2 2
MIRT693757 ZNF383 zinc finger protein 383 2 2
MIRT694014 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694594 AAR2 AAR2 splicing factor homolog 2 2
MIRT694983 PLAC8 placenta specific 8 2 2
MIRT695016 MRPS21 mitochondrial ribosomal protein S21 2 2
MIRT696414 DOCK7 dedicator of cytokinesis 7 2 2
MIRT697803 UBXN2A UBX domain protein 2A 2 2
MIRT697941 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT698775 STK4 serine/threonine kinase 4 2 2
MIRT699532 SIX4 SIX homeobox 4 2 2
MIRT701073 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT702610 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT702688 IRGQ immunity related GTPase Q 2 2
MIRT702931 HMX3 H6 family homeobox 3 2 2
MIRT703721 FAM127A retrotransposon Gag like 8C 2 2
MIRT704296 DDX19B DEAD-box helicase 19B 2 2
MIRT704332 DCTN6 dynactin subunit 6 2 2
MIRT706758 KIAA0907 KIAA0907 2 2
MIRT708483 OLR1 oxidized low density lipoprotein receptor 1 2 2
MIRT710773 PHF7 PHD finger protein 7 2 2
MIRT712484 FSTL3 follistatin like 3 2 2
MIRT712784 ZNF154 zinc finger protein 154 2 2
MIRT714507 SHE Src homology 2 domain containing E 2 2
MIRT714771 TERF1 telomeric repeat binding factor 1 2 2
MIRT715263 RNF125 ring finger protein 125 2 2
MIRT716447 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT718198 PSMF1 proteasome inhibitor subunit 1 2 2
MIRT720001 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT720394 ZNF549 zinc finger protein 549 2 2
MIRT720597 TTC39C tetratricopeptide repeat domain 39C 2 2
MIRT721231 CRCP CGRP receptor component 2 2
MIRT721261 SH3D19 SH3 domain containing 19 2 2
MIRT721802 GRM1 glutamate metabotropic receptor 1 2 2
MIRT722573 C1orf95 stum, mechanosensory transduction mediator homolog 2 2
MIRT722842 C17orf102 chromosome 17 open reading frame 102 2 2
MIRT722909 COA4 cytochrome c oxidase assembly factor 4 homolog 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-5189-5p Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-5189-5p Dabrafenib 44462760 NSC764134 approved resistant High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-5189-5p Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-5189-5p Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-5189-5p Osimertinib 71496458 NSC779217 approved resistant Low Non-Small Cell Lung Cancer tissue
hsa-miR-5189-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780)
hsa-miR-5189-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-5189-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-5189-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-5189-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-5189-5p Doxorubicin 31703 NSC123127 approved resistant cell line (HS578T)
hsa-miR-5189-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-miR-5189-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-5189-5p Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-5189-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-5189-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)
hsa-miR-5189-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

Error report submission