Gene Symbol |
SGCD
|
Synonyms |
35DAG, CMD1L, DAGD, SG-delta, SGCDP, SGD |
Description |
sarcoglycan delta |
Transcript |
NM_000337
|
Other Transcripts |
NM_001128209
,
NM_172244
|
Expression |
|
Putative miRNA Targets on SGCD |
|
3'UTR of SGCD (miRNA target sites are highlighted) |
>SGCD|NM_000337|3'UTR
1 AAGACTATCCATAGTGGACATTGTTGGCAGCATAAAGGCCTTTTTTGGCTTTAGACACTGGCTGCCAGCTATTTTTACTA
81 GAACACAGAAAGCCTATCAAAGACCTTGTGTGTATGTGTACGTGTGTGTGCGTGCTTGAGTGTGTTCGCGTGTGTGGGTG
161 GATATAAATATATATAAATATATATAAATAAATATATATATCCTCTGTATAAAATGAGGTTTCAGTACAAAAGGAACCAT
241 GGGTGACCCTGCGATATCCACTGTCATTTTCCATCCCATCCCCACCACCTGAGTGACAGAAATCTAAACACACATCCGTC
321 CCAACATTCCCCAGACCATTCAGAATCACACAGCGTATTAAACACTGACAGAATCTTCATCTAGATATTCGAGTAGCAGC
401 ATATCTTCTCTTTTAGTGTCATTACGAGGGAGTGATGGCGGGAATCTCAGTCGCACTCAAGCTCTGAGACCTTTGTATCA
481 AAAATAGGCATTTGATTTCCTGTTTTAGCTTTAGTAAGGCTGGCTAACTTCCCCCTCTTCAAGCTAGGAACTGGCAATGC
561 TGTAGAAGTCAGCCGTAGGAATTCAAAATGGCTGGCCTACCTTGGCTACCAGACATATTGGGGTTTTTGTAGTTGAATGA
641 ATGAGGAGGATGAATTTCAGCAAATTTTGAACTGCTCACCCAACTTCTGCTATCTTGCTCCCTCCAAACTCACAGATTCT
721 CCTACAGTCAAATTAGGAGCTGTAAATCAGCACAAAATAAGATAACAGCTGTTCCTCAGTGAGCTGGAAGCTACTTAATG
801 GCCTGATGGGCAATGAACAAACGGGTGATATGTCTCTGTTTAAGGGAAAAATGGCTTAAAAGCTGTTCTGTTCTCACTTC
881 TGACTTTAACCAAAAGATTTCAACCCACAATGATCAGGTCAATCAAAATCCCTAAGAGCAGAACTCCTACCCCAAAAGAA
961 GCCTGGAAGTCTAATTAAGAGTAGCATAAGGAACCTAATTATGTTTACCATGTTTCTTGGGATTGGTGGGAAATGTCAAA
1041 ACATGCCCTTTATTTTTAAAGGCATTCACAAACTCTCTGACTTTGTTCTTCTTATATATTTTTTCAGTGCCGGGATATTC
1121 ATATTCCTAAAGCCACTATTGTGTTTTCTCTAAGAAGCACTACATGCCACCAGAATTGTGCACTGAAAGATAATACAAAC
1201 TGAGTGTCTTTATGAGAATCACTGTGTCCCCTGAGGCCCAGCAGTACCTGCTTCCCTGTATGTGGAAGCAGCACCTCATT
1281 CCCGCCATCAGCTACCTCTCATCACCCCACCTTCATCATCATGCTCCAGGGTCACCCTGGCCAGCTCTTGTGCTGGGACA
1361 GGGGATTACACCATCTCTGTTCAAAGAGGGGGAAATGTGCCTATGCCTTAAGTCAATGCACTCAGCAAGGAGAAGCACAT
1441 CTTATTTATCTTGTTACCTATAGTTTACTTTGGGTGATTGGAGGGGAATGACTTAGTTATGACTGGACATCTTAAAAGCT
1521 GATAGACAAGCCAAATGGCTGGCAGATGATGTGGATTTCAAAGAGCCCAGAATGAACTCATCACTGGCTTAGACAGTCCT
1601 GGATGCCATTTGGAAAGTAGTGGCCCTGCAAGCCTAAATGAAGTAGTATTTGTAGGCCTGGGTGGCATTTGGATTTTTCT
1681 TTTCCCTCAACAAGGTTTTACTTTTTCTTACTTTACAAGCAAGGGAAGTTTTGTGATAGGAGAGAAATAAAAGATTTGAT
1761 ATTTTTTGAGATGACACTCAAGCATCAGGCTGAGATTTGCACACATGGGATGTAAAAGCAAGCTGTGTGTTGCTTAGTCA
1841 CTTACTTAGAAGTAGATGGTGGGGGACAGCGGCGTGGGTCCTAGCCTGGCCAGTGATGCTGCTGGCGTCCAGACCCCAGA
1921 CTCACTCCAAGCACTCTTGTTCAATATCTCATGCAGAAGAGTTGGGCTGGTCACTCTTAGGGGTGAGACCCCGTGATTGG
2001 TTGGTTTGTAGCACTAAGGTCTAAAAAGGAAAACCATAAAAGACATCAGATTACGCTGGATCAGTATAATTAATATTCCA
2081 TAGGGCCATGTTGCCAGAATCTGTATGTATCAATACAGGGTTTTTCCAAGCCAGGAAACGCCCTCCTTGGCTACTAGGAG
2161 CACCTATCCCATATCATTCAGATAAACAATGATAGCTACAAAGTCATTTGTGGCTAGATAGGTTAAGACAGGTGATTTTT
2241 TAAAGTAGACTGTCTTTGCATTTTGCCATCTGAAGTTCATTAATCTTTAGATGACAAAAAAGCAAAAAGTTCCCAGAACG
2321 TTTTTGCTTAGATTTTGTTCTAATCACCACGTGAAGGAATGAGATTAGCACCACAAGTTTCATGCCAATAAAAGAGACTG
2401 GTGTGATCCCACATGCAAAATTTAATCCTAAGGGTAGTGAGATCACAAACAGAATAAAAATAAGAGCAATCAACCATATA
2481 AATCAAGTACCTATTGGGAACAGACATAACATTCAATTTTTCATTTATGCTAAGTGACCACAGTATACAAAGTAATAAGC
2561 AGGAAATTTGATATGGGTTAAATTATGCATTTTGTTCAGATTTTGGAAATTGGTATGCATTATAAGTTTCTCAATGTACA
2641 TCTTTTTATCCCAACACCCTCAAACTAGAATATTTGTCAGTGGTCAAGAGAAAAAATTTTACCTGAATTCTTGGGGGCCG
2721 GCGGGGAGCTTTTACATTAAAAATCTACTAACGCCTACTTTTTAAAAAATGAGATTCTTTCTAATCTTTATATATGACAT
2801 TTTCTAGACAATCGCACCTTTGGGTATATTAAACAGCTGGTATCATAACAAAGAATCCAAATGAACCTTCAATATACTAG
2881 AAGTTCTAGTAGGTTAATATTGTTCAGAAGATTTTTACAAATTAAAAACTGATTTCCAAATATGTTCAACATTTACTTCT
2961 ATTTGATATCTGCTCAAGAAGTCATAGAAGTCTTGGGAAACTATTCGAGTATCACAGAGGTTTTCAAAAGCCCTTATGGT
3041 GACATCTACCTAGGTAAAAGCCTGACATGTGGCTTTATAATTGTTATGTTACCCAAGGGATAAACTTGAACTGGCTTTGA
3121 ACATCCTTTAGGTCATTTTCTCTTTGGATAATTTTCATCGCATATCCAGCAACTATAGACCAAAGTTTGCTTAAGGTTTG
3201 ACCCTAGAGCAGAGGTGGGCAAACTATGACCTGGAAACCAAATCTGACTTACCACCTTTTCCTGTAGTTAAAGTTTTATT
3281 GTCACATAGCCACATACATTCATTTACATGTTTTCTGATTTTACACTACAGCAGCAGGATGGAGTAGTTGTGTCAGAGAC
3361 TATGTATCCCACAAAGCATAGATTACTTACTATTTAGTCCTTTACAGGCAAAGTTTCCTCACCCCTGACCTAGAGGTTTT
3441 TGTGGTATGCATTGGATATAGCAGGAAAGAAAGCACATTTCCAAACAGCAGGGAGTAAGCTTACATTTCTGTGTAGGTTT
3521 GGGAATATAGTTACTTGGCAAAGTCTTTCAGGAAGGAAGCCCTTCCTTATGTTACATGTGGAAAGCCTGCCTTCCAAGAC
3601 ATGTGGAAGTAATTGATCCACCTGCCAGAGAAACACAGGCTCAGAGGATGCCTGGGAACAGGGAGGATGGGATTAGTGGA
3681 AGCTTAATGGAAAAGGAAAGTTATGATCCTCCAAGACCCTTAATTGATAGACCATACCAGGTTCTGCAGGTCAGCATCAT
3761 TGTGTAATGAGAGTGAAGTAGGGGACCCTGTGGTTCAACCTTAGAATCTGTTTCCTGTAGGCTCTTTCTGCTGTCTATAT
3841 TCATTAAAGTTTTCCACTTCACCCTCCCATAGTCTAGAGGGATGCCCATTCCATGGTCCTCCAGAGAATAGTTTTGACTT
3921 AACATGTCTGTTTAGCCCACATCACGTCAGTTATCAACACCGCCACTGTGCTTACTGTTCCTACAGCCACACCAGGCTTG
4001 AAGAGTTAGTGAGACCAACAAATAATTGGAAGTATTGGAAAAAGCAAAATACATGGGGACAAAAAAAATACAGTGAAATT
4081 CTTTTTATCAAACTGATGCTGTGAGAAACCAGATGAATGCCAGTTTGGCTTTATTTCTAAGAATCTGGGTCTTCATTCTC
4161 TGGTGTAGAAGGAATGCAAAAAACTATAACAACAACAACAAAAACATATTTTGAAAAGACATATTCTGACATCTCTGCTT
4241 GTGTGTGGTAAGGCAGGTTCCTATCAGACATTTATCCCTTTGGTCAAGATCCCTTTTGCTCATCCAGGGTTTCATACTCA
4321 ATATCGCTTAAAAAAAAAAAAGTATCAGCTAGGGATGACTCTGGAAGTATGAGTATCATGGTGGGGAGGAAGGAATTTTT
4401 TTTAAATGTAAATGACCCCCATTTACCAGACCCTAATCAAAGTCACTTAAGGGAATCCCTCAGCCTTTTATTTGGAAACA
4481 GTTGAAATAAACTGGCAGCAGCTAGATCAGAGTATCTTGCTTTATTTTATAAAGGCCAAAGGTAGTATGAAGTTTGGACC
4561 AAAAAGGTAAATAGATCCATTCCAGCACCTGATACTGATTTTTCAAGGCTCTATGAAAGGTCAAAAATTTCATTAAACAA
4641 GACCAGTTCTCCCTCTTCCCCCTGTCCCAAGAAATCTTAGGCATGAAAAGGATAAGGAAACAGCTCCTGGAATGATACAT
4721 TTGCATAGTGCCCTAGTAGCAGGTTGGGAAAAAGTTATAATATAAGAAACAACCTTCGAAAACAGGCCTTTTATCTCAAA
4801 GATAAAATGTCTTTCTTGTGGTCTTTCATCACTATCTCCGTGGTGGAAGGTTCCCCTAGTTCCAACATATTTCCATTAAA
4881 ATAGTCAAAGCCACGGCATTGGGATGTCAGATGCCTCTCTTTCTTTGTGGTAATCGGAATTTAAAATTATACAGTTGCCT
4961 CTGAATTTCTCATGCACAAAGCCAAACCACTGATAAGAGATAAAGCAGTCTGAAGCCTGCTGCTTCAGCCAGCACAGCAC
5041 ACCACACACGCTCGCACTTTCAAAAGCAATGTGATTTCTATGGTTCTTAAAAGCTTTCTTCATAAGGGAGTCCCTGAAAT
5121 TTCTCAAGGCAGGTTTGAATGGCAAAGGGAAAATAATTACTTGTGGGAGGTCCTCCTTTTGAGTATTGTTAGAGCATACA
5201 TGTAAAAGAAAATAACCTTTTTGGGGCAACTCATGCTCACACATGCTGTTTTCTTTGGTTCTCCCCCTACCTTCCTTTTG
5281 TAGATATTGACAGAATAGGAGGAAATGAGCATCCTTATTTGAGAAAGAGCAAGAATGTCATGAGCCCTTGATGCAATAGT
5361 AAGTGTGATGTCATCATACAGTGTTAATGATGCTATCAAATCCATCAATAAACAGTCTCAAACCTTCCAACAACAGTGCT
5441 CACTGCTGCTCCTCAACTTCAGCCCAGCAAGCAGTAATATCATCACCCATTTTGAGATATGCAGGTGGAATAGAACAAAG
5521 AAACAGCCACTGTAATCGAGAAGCATGTTTACTGTCTAAATCCACCTGTTGCAGTAGGAAGCCAGAGTGGGGTTCCAAAT
5601 GCCTCATTAAGTATGTGGACAGCCTCACTAGTAAGTGAGTGAATTTGGCTTCATCACTGAACATTAGCTAAGGTCAGCTT
5681 AATAACACAAATATGAGGCCGACTTCTTTGCGAGAAGAGAAAAGAAAACATCTGCTTGATTTAAAATCCACCCCACATGC
5761 CTAGAGTTGTCTAATAGTCCCTCACTTTCCAATGGCTTCACATCCTACTTCTACATTTGGGGTTTTTTGGTGAAATCAGA
5841 GATAGCTCAGGATTTCATAAAACGAGAAACTCCAAACTGGTCTATTAGGTTCCATGGGAACACTTGTAGCCAAAGGATTG
5921 TCTGAGGGCAGGAAGACGACACTTGTCAACAAGGAAGACAGTGTTTCTTTAGTTCCCATATTCATCTAATTCATGGGGTT
6001 CTAACATTTTGGGGGGCCATAGATTCTTTTGACAATCTGAGCCAATCTATGAAACTTCTCCCCAAAAAGAACCACCCCAC
6081 AAAATCTTGCAAAACGTAAGAGATTTTCCTGGATCTGAAGCTACCCGAAGACATGGGAAGAGTTGTATTCTATTATTCAA
6161 TTTTAAGAATATTTATTAATATTCACTGAGCTATTGCTAGCCACTGTGCTAAACATTTTACATACATTCTCCTATTTCAT
6241 CCTCAAAACAATCCTTTGAGTTGGGTTTTAATATAGTTCCAATATTCGGATGTGAAAACTGAGGCTTATAGTGGCTAAGA
6321 AACTTGCCCAAAGCCACTACCTAGAAAATGGCAGAGCTGGAATGTAGGTTTAACTCCTGACCACTATGCTATAAAGTCAC
6401 CACATGTCAAACTAATTTTCAAGTTGTTGGGACATGTCCCCTACTAGGTTTTAAACTAGATCTTCCTTGGTAGATGAAGC
6481 TATAGAACTTCTATTTTCCCTGCTTTCTGTAGTCTCTCACAGTGACAGCATCTATACTAAAGTATAGATACCTAAGGGGA
6561 AAATATAGAAAGCCTGCCTGAATAATAGAATCTAGAACAACAACAAAAATATTAATTTTTTCTGTGTATGCTTAGGTCAA
6641 GCTTAAAAAAAAAAAAAAAAGACCGGAAAATACCTGGGTTGTTAGCCTCACATTTAGGAAAAAATTGTAATACTCAGTTA
6721 TCTGTGTGTGTGGCTAAACAAGTCAGCATTTCTGCACACATACATCTCTTTCCTTTATACTTCCCTTCAAAAGACAAATA
6801 TCTTACTTTTGATCTTTGACACTATTTGGTCAGTATTCTTCTTTACCTTTACTTGTGGCAAAACTCAAGGAAGCGATCAA
6881 ATAGAGGGAAGCTCATTTCTATCATTGTCTCTGTTTCCCTATAAGAAAGAACTACCAGGGACTCACTGACTGCATTAGGC
6961 ATACAATGTCAGAGCTGAGCTGACCACTCTGGTCCTGTAATGTCTTTGGCCTCACACCTTGGCAGCCATCATTAATGGGC
7041 CATACCCTTCCCCAGGTGCAGAATTCTCCTCCCCAGAGCACTCAGGCCGTTACTACCAATTTATCTGAGTTGGAAATAAG
7121 ACTCATTTGCCAGTTCTTATTTTTAAAGTGGCACCCTTTAACTTTGAACCTGTGTATTTTACACTGGCATCCTAGATTCA
7201 GCAATGAGGTTTGGTGGTGTTTCAACTAGGAAGGGAGAAAATGAGTGCATCTGAAGTTCCTTACAGCTTGGTTTCTTTGG
7281 AATGCTTTCATCTTCTAAGCAAAGGGATCAGGGTTTGATCTGTAAGAGTTAAAAAGACAAAGTCATTTTGAAGAATTAAC
7361 TCAGCCAGGGATCATGCAAAAAGATTAGAAACCATAATGCCCTTGTTAAAGCCCTGCTGTCAACCTGCCTTCACCCAGAG
7441 CTTAGAGGGCCACAGCAGCAAAGAGGTTGGGGTCCATCCCTCTCTGATGTGCTTTTTCCACAACACATATCTGGTCCTCT
7521 GGCAGGATTGTGGATAGAGCTCCTCACCATACCCAAAAGACTCAGCCCCAGTGCCAGTGCTTTCCTGGTTCAACAACCCA
7601 CCACAAAACCTTAGTAAAAGGATGAGCCAAAAATGAAAAAGACTCGACTCTACAGTAAGTCAGTCAGGGATTTCCTTTTT
7681 AATGGTTTAAGACATCCAAATGGCAAGCCAGGAATAGATACCATTAAAGGGTCTCATAGGACTAACCTTACCAGAGCCAG
7761 AAATCTAGCTCTCTGGAAGAGATGCAAGATTCTAGAAAAGTAAAGGGAAGTGTCGGCACATCTAAATTTAGTGAACACAA
7841 AATTAATTTTTATCTAGTCTGTGACGGAGGGAATAAAGTTTTTCATGTATCAACCACCTCCCCCAGTCAGGTTTCTCCCT
7921 TTTTGAGATTATGAAGAAGCTGAGACATACTTCTTAAGGAGGTCGTGTTTTAGAAGGAAAAGGCAGAGGCTATCCATCAT
8001 TATGCTGGCTAGATGCGCTTCTGAAGAAGCCGGATTCTGATGTTCTTAACCAAAATGGTGAGGTCATGGAAGTCCCATTT
8081 GCTTGGAGATTTTGAAAAAAAAAAAAAAAAAAAACCCATTCCCATAAAGTAATTGAGTTCAGCCTTTGGATTATTTTTGG
8161 TTTGGTTTTTCTCTGGTTTTGGGTGTGATGTAAGAAGAGCTTTTTAGTTTTGTTTTGAATAACATCAATCCTTGCACACT
8241 CTATGCAAAAATTTTGTAAGCATTTCAATAATGCTATGAATTACAAGGAACTATTTTAACTTTATTACACTTTCTGTATA
8321 AAAAATTTGTATTTAATATTATTTCGACCACAGTCTTGTAAAATATATTAATAAAAATAATGATTGGTAAGAAGGAAAAA
8401 AAAAAAAAAAAAA
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' gacguuccCUCUCUUCUUUCUGu 5'
|||:| ||:|||||
Target 5' gattgtctGAGGGCAGGAAGACg 3'
|
5916 - 5938
|
147.00 |
-17.90 |
2
|
miRNA 3' gaCGUUCCC--UCUC-UUCUUUCUgu 5'
||| || | || |:||||||
Target 5' atGCATTGGATATAGCAGGAAAGAaa 3'
|
3447 - 3472
|
139.00 |
-15.40 |
3
|
miRNA 3' gacGUUCCCUCUCUUCUUUCUgu 5'
|| || :|:||:|||:||
Target 5' tatCATGGTGGGGAGGAAGGAat 3'
|
4374 - 4396
|
136.00 |
-17.50 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|