pre-miRNA Information
pre-miRNA hsa-mir-367   
Genomic Coordinates chr4: 112647874 - 112647941
Synonyms MIRN367, hsa-mir-367, MIR367
Description Homo sapiens miR-367 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-367-3p
Sequence 44| AAUUGCACUUUAGCAAUGGUGA |65
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN24411246 17 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs535597757 1 dbSNP
rs1013348949 11 dbSNP
rs896333735 12 dbSNP
rs751269136 14 dbSNP
rs1163501507 16 dbSNP
rs757092597 21 dbSNP
Putative Targets

Gene Information
Gene Symbol ZNF772   
Synonyms -
Description zinc finger protein 772
Transcript NM_001024596   
Other Transcripts NM_001144068   
Expression
Putative miRNA Targets on ZNF772
3'UTR of ZNF772
(miRNA target sites are highlighted)
>ZNF772|NM_001024596|3'UTR
   1 GATGGGAGATAATTCCGTTTCCTTGTTCAACATAATAACTGACATCAGAGAGAAGCTCCAAGCATAGCCTTTATGTGTAG
  81 CCGACAGCCAGAAGTAGAACTTTATACACTCAAACACTCACCCTGGGGAGGTTCTTCCGAGTGCCAGCTATATGGGAAGC
 161 CTTCTGGAGCTATGCTGAATTTTCTAGACTCTTGCTGGAATTTCGTCAAGGCAGTGCCTGTTAGAAGCCATCTGTCTTTG
 241 TGCTGGAAGAGTCCTGCCTTGTGCCAAAGTAACCCCAATGTGTTTCAAAAGACAGACCTCTGTACTATTCCCTTCCCTGG
 321 AGGGAATCATCAGTAGCCTGAGGCCATCAAGGATTCTCACTTTTTTTCTGCCCCACTACTGGTTTAAGCATGAGCATGAC
 401 CCAGTTTTAGCCAGAAAAATGGGAGCTTTGTTCTGCTGACCACTGGCAGAGGTTTCCCTTCATGGATATAGTTGATCTCA
 481 CATGGCACTTGGGACGAATTTTTCTAGCCTTCAAGACACCTGACCTGAAATTGGCTGCCTCATATTCTGGTTTTGCAACA
 561 AATGCCTTAATTTTTAGACTATCTGAAATCTTGAGGATTCTGTTCGCTTTGTGGGTTGGGTTGAGAACAGAATTGAGCTA
 641 AGCCAGTATGAAGGGAAGAACAGCTTTTGTGAGAGCTCCAACTATCTGTATCTCTGAAGTGATAGTAGGATGGCAAAGAC
 721 TAGCTCTTATGCTAGTGTCAAGCTAACTTACTTGACTGCTTCAGCTCTCCTAGGAAAGAATGCCAGTCTTTGTAGGCCTA
 801 ATCTTTTGGTCTATATGTTAAGATTTTTTGTGTAATTGAGGTCACCCTAAGCAGTGGGCATTTGTTGTGATAATCTCTAA
 881 TGTGTCTGGGAGCAACATGAATTACGTCCCTTGTTCCCAGAAGATACTTCATATTCCCAAGGCTTCTTGAGGAGAATTTG
 961 AACTCAGTGGACATGTCAAGATCTCTGAAGTCTATTTTTCAGTAGGCAGTTGATATTGGCTGTCCTCCAGAAGGCCCAGG
1041 TAGGAATCATAGTTGGTGCAGAAACCCAGATTAATAAAGGAATGAGAAAACTGCAGCAAACTATAGGGAATATGACCCTT
1121 CTAAAGGTACATCCACATGTGTTTCCATTACTCTGGCTCCATTATGAGGGTTTACAGAAATATTTCCATACCTGTGTCTC
1201 TTATGGCTAAGGTTACTGTCCAGAAGTCAGTCTAAACATTTTTGCAATAAACTGCACATATTTATAGTGTACCATTTGAT
1281 AAGTTTTGATACATGTTGGCACTTCTCAAACCAAAAGTTTCCTGATTCCTTTTATATTTTCTCCCTTTCCTTCACCCATC
1361 CCCAGGCAACTATTGATCCGTTGTCACTGTAGATTTGTTTGTATTTCCTAGAATTCTACAGAGATAGAGTAATTTAATAT
1441 GTATTCTAATGTTTTTGGCTTCTTAAACTCTGAAATTAAGGCTCATGGTGGTGTTCTGTGTTTCATAGTTCATTTCTTTT
1521 CATTTGTACTTTGCTAAGAGTGTTCCATTGTAGAGAAATAGTTTCAAAGCAAGTGATCCAGGAGAGAACTCACACAAGAA
1601 CAAAGCCACAGTATCTGTCATTACCTTAAACTGAAAGTGATGAGCCGTCATTTCTGCTATATTTCATAAGTAACCCTAGC
1681 TAATCCTGGTTAAAAGTGGAAGAGAACTACACAAAGGTGAAAATAGGGATTTGTGGGGCGTTTTCTTGGACTCTGGTGAC
1761 CATAATCCTATATGGTTTTTTTCTTTTTCTGTTTTAGTTGTTTAATATGAATTACATTGACTGATTTTTTTAAATGTTAA
1841 GCCAACCTTGCATTTCTGTAATAATTCCCATTTGGTCATGATGTATTAGTCATTTAGTATATTGTTGAATTTGATTTGCT
1921 ATTTTGTTTTGTTTTGTTTTGTTTTTTTGTAACAAGTTTTGCACCAATGTTCACGAGTGATATTTGTCCCTAACTTTCTT
2001 TCTTGCTTGCTTGCTTTTTTTTCTTTGTAATTTTATATCTTGCCCAGGTTTGGCTTTGGTATCAGCATAATGCCAGCTTT
2081 ATAGAGTAAGTTGGGAAGTATTCCTGCTCTTCAGCTCTCTGGAAGAGTTTGTGAATAATTGGTATTATTTCTTCCTTAAA
2161 TGTTTGGTAGAATTCACCAAGGAAGCTGTCTGGGCCTGGAGTTTGTTTTGTAGGAAAGTTTCTAACTATAAGTTTGATTT
2241 CTGTGGTAGATAGAGGGCTGTACAAGTTATATGTACATCTGTCTGTGTGTGTGTTGTCTGTCTGTCACTCTGGCCCTGAA
2321 GTGTGTTTTGTAGGACAGCATCTAACTACAAGTTTGATTTCCATGGTAGATGGAGGGCTATACTAGTTATATATACATCT
2401 GTCTGTCCGTCCATCTGTTTGTCACTCCATCCATCCATCTATCTCTAGAGTGAGCTTTGATGGTTTGTGTCTTTCAAGGA
2481 GTTTTTCTGTTTTATTTAAGTACTCAAATTTTTCAAAATATTATTTTCATACTTGTAGAATTTGTAGTGGTGCAACCTCT
2561 TCTATTCCTGATACTGGTAATGTCTATATTTTTCTTTTAACCTTGATTGGTTTGGGTAGAGATTTATCAATTTTACAATT
2641 TTATTGATCTTAAAGTACTTGGTATTATTGAATTTTCTGTTTTCTGATATTTTGGGATTTTTCTTTTCCATTTTGAGTTT
2721 TACTAATGCCTTCCGCTTTTATTGGATTTCATTTCTTTTGCTACTTTTTAACATGGAAGCTGAGGTCCTTCATTTCAAAC
2801 CTTTGGGTTTTTTTCCCCTAATATGGGGAAGAGATGTTAATGTTAAAAATCTATCTGAGAACTGCTTTAATTACCTCCCA
2881 TCAAGCTTGATGTGGTTTCATTTTTTTTTTTGAGACAGTGTCTTGCTCTGTCATCCAGGTTGGAGTGCAGTGGCGCGATC
2961 TCGGCTCACTGCAAGCTCTGCCTCCTGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTTGGACTACAGGCGC
3041 CTGCCACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTC
3121 CTGATCTTGTGATCCGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCCAGCCGATGTGGTTTCATTTT
3201 AGTTGAGTTTAGGATGTTTTCCAGTTAAAAAAATTCTTCTTGACACATGGCTCTTTTTAAATGTATGTTATTTAATTCCT
3281 AAATATTTGGGGATTTTGCTTATCTTTCTGGTAGTTTCTGCAATAATTCCATTGTGGTCAGAGTACATTAAGACTTGAAT
3361 TATTTACATTTATTGAGATTTGCTTTGTGGCCCAGAATATGGGCTATCTTGGTATGAGTTACATGTTCACTTGAAATGTA
3441 TACTGTACTCTCGTTTGATGAAGGGGTTCTACAAGTGTTGATTAGGTAAAAATGGTTGATGTTATTTAAGTTTTTTCTAT
3521 CTTTATTGACATTCTGTGGTTTTGGTTCCAGCAATTATTTTAAGAGGATTGTTGACATCTCTGAATATTAAATTGGATTT
3601 ACTTCTCTGCAGTTCTGTCAGATTTTGCTTCACATATTTTAGTATGTTTTTATTAGGTGAATAATAAATATTTCCTATTT
3681 TATGTCCAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aguGGUAACGAUUUCACGUUAa 5'
             |||  |:|::||||||:| 
Target 5' catCCA-GGTTGGAGTGCAGTg 3'
2932 - 2952 146.00 -17.30
2
miRNA  3' aguGGUA-ACGAUUU-------CACGUUAa 5'
             |:|| ||:|||:       |||:||| 
Target 5' ggtCTATATGTTAAGATTTTTTGTGTAATt 3'
808 - 837 139.00 -10.11
3
miRNA  3' aguggUAACGAUU-UCACGUUaa 5'
               |||  ||: :||||||  
Target 5' gtagaATTTGTAGTGGTGCAAcc 3'
2535 - 2557 133.00 -6.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30454600 4 COSMIC
COSN2375510 7 COSMIC
COSN30142840 15 COSMIC
COSN22278622 16 COSMIC
COSN30151764 16 COSMIC
COSN31502926 22 COSMIC
COSN31597898 67 COSMIC
COSN30486445 69 COSMIC
COSN31586804 80 COSMIC
COSN30146225 97 COSMIC
COSN31575717 128 COSMIC
COSN1772807 318 COSMIC
COSN24494076 436 COSMIC
COSN22978051 495 COSMIC
COSN26507384 579 COSMIC
COSN31528608 583 COSMIC
COSN22299101 788 COSMIC
COSN5762378 810 COSMIC
COSN20079474 1204 COSMIC
COSN5439833 1361 COSMIC
COSN7450992 1647 COSMIC
COSN8262671 1889 COSMIC
COSN5439832 1982 COSMIC
COSN17037503 2106 COSMIC
COSN17037502 2481 COSMIC
COSN6148083 2501 COSMIC
COSN31615091 2808 COSMIC
COSN21450354 2854 COSMIC
COSN19408749 3057 COSMIC
COSN6148082 3412 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1177506508 5 dbSNP
rs1428273970 10 dbSNP
rs747681870 15 dbSNP
rs778783483 16 dbSNP
rs754877610 17 dbSNP
rs763569744 17 dbSNP
rs1274144620 25 dbSNP
rs555466986 26 dbSNP
rs1241928638 27 dbSNP
rs779770683 30 dbSNP
rs757497031 32 dbSNP
rs761982293 33 dbSNP
rs371099162 35 dbSNP
rs1341197395 39 dbSNP
rs758500959 40 dbSNP
rs1297467964 43 dbSNP
rs777020777 45 dbSNP
rs1293570698 52 dbSNP
rs1198526311 54 dbSNP
rs1490365091 57 dbSNP
rs1197598898 61 dbSNP
rs1043252743 64 dbSNP
rs929737292 65 dbSNP
rs922283465 68 dbSNP
rs1391099385 70 dbSNP
rs1011425377 74 dbSNP
rs1343983812 77 dbSNP
rs1166923132 79 dbSNP
rs542506721 80 dbSNP
rs891686284 82 dbSNP
rs764419160 97 dbSNP
rs1367732113 98 dbSNP
rs1406202833 99 dbSNP
rs942334269 103 dbSNP
rs576370061 106 dbSNP
rs1329429117 107 dbSNP
rs911497129 109 dbSNP
rs371883861 110 dbSNP
rs1364183212 113 dbSNP
rs1225968324 118 dbSNP
rs1316684974 119 dbSNP
rs1356565396 120 dbSNP
rs539649328 122 dbSNP
rs761145332 127 dbSNP
rs1448228185 129 dbSNP
rs1211111321 131 dbSNP
rs768009618 138 dbSNP
rs1454039324 139 dbSNP
rs538317580 139 dbSNP
rs908978278 147 dbSNP
rs1162891001 150 dbSNP
rs1385639834 152 dbSNP
rs984672220 153 dbSNP
rs952932913 160 dbSNP
rs1332697202 169 dbSNP
rs918826887 175 dbSNP
rs1025450785 193 dbSNP
rs1387871276 193 dbSNP
rs79027581 199 dbSNP
rs1386067730 204 dbSNP
rs534070131 205 dbSNP
rs960282484 207 dbSNP
rs1034237512 214 dbSNP
rs10407042 216 dbSNP
rs1352185237 220 dbSNP
rs1001503476 223 dbSNP
rs1266972991 229 dbSNP
rs1464802143 230 dbSNP
rs970522422 260 dbSNP
rs372054512 261 dbSNP
rs1011809863 263 dbSNP
rs187936195 269 dbSNP
rs1444648082 274 dbSNP
rs1443416541 275 dbSNP
rs569966504 278 dbSNP
rs1366993343 279 dbSNP
rs772393382 298 dbSNP
rs748844675 305 dbSNP
rs772804116 307 dbSNP
rs549971978 308 dbSNP
rs1159955309 310 dbSNP
rs1411356996 311 dbSNP
rs901770270 317 dbSNP
rs1178506018 326 dbSNP
rs1038692815 329 dbSNP
rs1395288832 336 dbSNP
rs769606692 337 dbSNP
rs1046860818 346 dbSNP
rs148162742 350 dbSNP
rs1410076950 359 dbSNP
rs1287094880 360 dbSNP
rs1326463078 368 dbSNP
rs1274453025 373 dbSNP
rs1258344088 379 dbSNP
rs10406621 388 dbSNP
rs1200286265 398 dbSNP
rs1254552049 400 dbSNP
rs1484133028 402 dbSNP
rs1048834062 415 dbSNP
rs1251089328 421 dbSNP
rs1471690452 425 dbSNP
rs1178125211 426 dbSNP
rs1378172366 435 dbSNP
rs541098762 440 dbSNP
rs12977381 452 dbSNP
rs1429915847 458 dbSNP
rs1246813382 461 dbSNP
rs751280154 465 dbSNP
rs182918848 468 dbSNP
rs1244671762 476 dbSNP
rs960251618 477 dbSNP
rs1304018480 479 dbSNP
rs910856950 486 dbSNP
rs191687278 495 dbSNP
rs1320685638 496 dbSNP
rs1401522169 499 dbSNP
rs1358242224 508 dbSNP
rs980489770 516 dbSNP
rs370882367 519 dbSNP
rs1482096056 524 dbSNP
rs1424774768 533 dbSNP
rs576282864 538 dbSNP
rs1022118782 539 dbSNP
rs1432466582 543 dbSNP
rs978296210 544 dbSNP
rs1391778489 545 dbSNP
rs10406026 546 dbSNP
rs1167543161 557 dbSNP
rs1472426300 567 dbSNP
rs956323517 576 dbSNP
rs1459154564 578 dbSNP
rs10406544 579 dbSNP
rs1389409948 582 dbSNP
rs1487149239 593 dbSNP
rs558461811 595 dbSNP
rs10407734 597 dbSNP
rs534299577 602 dbSNP
rs568467712 604 dbSNP
rs12977532 605 dbSNP
rs118080625 606 dbSNP
rs1266038644 607 dbSNP
rs757522761 609 dbSNP
rs1209832272 611 dbSNP
rs1488233747 614 dbSNP
rs1207971394 615 dbSNP
rs1249870531 619 dbSNP
rs754044898 620 dbSNP
rs1187657590 636 dbSNP
rs1388117196 644 dbSNP
rs1425130984 646 dbSNP
rs764511070 658 dbSNP
rs952615626 663 dbSNP
rs1455986673 665 dbSNP
rs1340662022 666 dbSNP
rs1049284967 675 dbSNP
rs1324448133 678 dbSNP
rs929036874 681 dbSNP
rs897591729 688 dbSNP
rs1025488938 711 dbSNP
rs1217186015 718 dbSNP
rs1037137792 720 dbSNP
rs1230232475 730 dbSNP
rs10405925 731 dbSNP
rs10407309 745 dbSNP
rs1405146043 754 dbSNP
rs1270132515 760 dbSNP
rs1465255586 769 dbSNP
rs1208049450 771 dbSNP
rs980412189 782 dbSNP
rs1182071835 797 dbSNP
rs1255107470 798 dbSNP
rs766574612 801 dbSNP
rs1421512445 806 dbSNP
rs866791269 808 dbSNP
rs1404187754 809 dbSNP
rs1397135978 810 dbSNP
rs990566091 811 dbSNP
rs375873225 813 dbSNP
rs1343787387 816 dbSNP
rs1172685373 824 dbSNP
rs1303611714 834 dbSNP
rs10426255 837 dbSNP
rs1053432235 838 dbSNP
rs570622386 841 dbSNP
rs1329943195 842 dbSNP
rs1200465005 843 dbSNP
rs1227710604 843 dbSNP
rs1266225956 844 dbSNP
rs1210609034 845 dbSNP
rs1236702627 846 dbSNP
rs1482036854 847 dbSNP
rs10426249 848 dbSNP
rs1251903377 849 dbSNP
rs35855596 849 dbSNP
rs1472009589 850 dbSNP
rs1245115490 851 dbSNP
rs1182056429 852 dbSNP
rs1406473392 853 dbSNP
rs188781819 854 dbSNP
rs1177182993 856 dbSNP
rs1042993808 857 dbSNP
rs182937846 860 dbSNP
rs1310163949 873 dbSNP
rs1351169435 877 dbSNP
rs1438401280 882 dbSNP
rs191572974 883 dbSNP
rs1007515842 890 dbSNP
rs1197280579 905 dbSNP
rs1277568694 906 dbSNP
rs1317736323 906 dbSNP
rs1206837871 911 dbSNP
rs1264138093 922 dbSNP
rs959428526 925 dbSNP
rs1369307140 933 dbSNP
rs547253499 950 dbSNP
rs1202355675 955 dbSNP
rs1435174138 958 dbSNP
rs1027291644 963 dbSNP
rs984767773 964 dbSNP
rs1192290573 971 dbSNP
rs1424904297 980 dbSNP
rs950697656 983 dbSNP
rs1170695027 985 dbSNP
rs562180760 994 dbSNP
rs1429386825 999 dbSNP
rs897560746 1011 dbSNP
rs143453419 1016 dbSNP
rs1351689879 1024 dbSNP
rs994459073 1025 dbSNP
rs1274242973 1036 dbSNP
rs965275862 1037 dbSNP
rs938842680 1038 dbSNP
rs907418849 1046 dbSNP
rs1336367287 1049 dbSNP
rs1450537199 1056 dbSNP
rs1340954404 1057 dbSNP
rs1019864685 1061 dbSNP
rs1291322839 1067 dbSNP
rs1044958435 1069 dbSNP
rs1461922074 1071 dbSNP
rs1222936472 1072 dbSNP
rs1246689057 1073 dbSNP
rs1353076629 1076 dbSNP
rs1190867256 1080 dbSNP
rs1173015052 1091 dbSNP
rs577515949 1095 dbSNP
rs1053508028 1099 dbSNP
rs1416035909 1102 dbSNP
rs1384193168 1103 dbSNP
rs1406074761 1106 dbSNP
rs1181445900 1107 dbSNP
rs1445912446 1122 dbSNP
rs1256262828 1126 dbSNP
rs1222457446 1129 dbSNP
rs74862416 1131 dbSNP
rs902145027 1135 dbSNP
rs1479635693 1145 dbSNP
rs990146380 1146 dbSNP
rs1252802032 1151 dbSNP
rs372756954 1153 dbSNP
rs1358548197 1154 dbSNP
rs1314614872 1161 dbSNP
rs1244071496 1162 dbSNP
rs1270761711 1169 dbSNP
rs1342270932 1173 dbSNP
rs1234158217 1175 dbSNP
rs1313567442 1177 dbSNP
rs924677715 1184 dbSNP
rs10153521 1185 dbSNP
rs1394937257 1187 dbSNP
rs1300466376 1193 dbSNP
rs965866741 1194 dbSNP
rs1430804502 1196 dbSNP
rs760355999 1198 dbSNP
rs1249030255 1202 dbSNP
rs768134006 1204 dbSNP
rs1483052765 1209 dbSNP
rs1191275908 1211 dbSNP
rs1426169560 1216 dbSNP
rs1239468320 1234 dbSNP
rs918113474 1237 dbSNP
rs554779273 1247 dbSNP
rs1162686160 1249 dbSNP
rs1415783747 1250 dbSNP
rs1458689693 1252 dbSNP
rs1017398703 1257 dbSNP
rs1387624580 1264 dbSNP
rs1310770330 1270 dbSNP
rs561524399 1273 dbSNP
rs1218252757 1274 dbSNP
rs909321407 1286 dbSNP
rs951973123 1288 dbSNP
rs1230759515 1291 dbSNP
rs929318147 1293 dbSNP
rs779670505 1294 dbSNP
rs772085876 1297 dbSNP
rs972714929 1305 dbSNP
rs1203710892 1317 dbSNP
rs1281192249 1327 dbSNP
rs993111253 1328 dbSNP
rs961718662 1334 dbSNP
rs373407048 1336 dbSNP
rs965656090 1340 dbSNP
rs148816681 1349 dbSNP
rs1473648500 1353 dbSNP
rs575686093 1353 dbSNP
rs1003205131 1355 dbSNP
rs779020539 1366 dbSNP
rs953819063 1372 dbSNP
rs904947030 1379 dbSNP
rs369309384 1380 dbSNP
rs1174063158 1388 dbSNP
rs1402661635 1390 dbSNP
rs1413488906 1393 dbSNP
rs1310755554 1420 dbSNP
rs145514522 1427 dbSNP
rs1021021793 1429 dbSNP
rs1287189879 1437 dbSNP
rs893371841 1443 dbSNP
rs1237538029 1459 dbSNP
rs1276903808 1460 dbSNP
rs1346237603 1461 dbSNP
rs896743174 1464 dbSNP
rs1484061876 1465 dbSNP
rs531415992 1484 dbSNP
rs934641352 1491 dbSNP
rs775344539 1493 dbSNP
rs753849891 1494 dbSNP
rs1040402728 1495 dbSNP
rs547524481 1505 dbSNP
rs944743100 1516 dbSNP
rs1453624944 1521 dbSNP
rs1382313355 1522 dbSNP
rs910645449 1528 dbSNP
rs1430022247 1529 dbSNP
rs868255657 1533 dbSNP
rs1306806873 1537 dbSNP
rs1393694097 1541 dbSNP
rs778070878 1542 dbSNP
rs1332022698 1547 dbSNP
rs985963908 1550 dbSNP
rs1301744845 1555 dbSNP
rs73065298 1561 dbSNP
rs2360764 1564 dbSNP
rs953891961 1569 dbSNP
rs576874899 1576 dbSNP
rs547867214 1577 dbSNP
rs531336024 1586 dbSNP
rs1211540833 1596 dbSNP
rs1482511302 1598 dbSNP
rs1268019632 1605 dbSNP
rs1468002874 1620 dbSNP
rs1191458415 1622 dbSNP
rs1237229467 1646 dbSNP
rs767745593 1647 dbSNP
rs1169386289 1649 dbSNP
rs1034613250 1650 dbSNP
rs12985337 1659 dbSNP
rs752102539 1680 dbSNP
rs1295773719 1693 dbSNP
rs3029915 1699 dbSNP
rs75286888 1699 dbSNP
rs762901416 1699 dbSNP
rs1440851186 1702 dbSNP
rs2885061 1704 dbSNP
rs532791069 1706 dbSNP
rs896114691 1710 dbSNP
rs560641479 1716 dbSNP
rs1229936555 1717 dbSNP
rs1305803076 1731 dbSNP
rs185057534 1733 dbSNP
rs1054710512 1739 dbSNP
rs574917104 1740 dbSNP
rs1249656313 1753 dbSNP
rs1002403421 1756 dbSNP
rs1259283194 1759 dbSNP
rs561493787 1760 dbSNP
rs887986370 1773 dbSNP
rs999070026 1775 dbSNP
rs1362700905 1782 dbSNP
rs1043199588 1783 dbSNP
rs1049203610 1783 dbSNP
rs373574348 1783 dbSNP
rs993628203 1783 dbSNP
rs761418392 1785 dbSNP
rs2360765 1791 dbSNP
rs1369109087 1803 dbSNP
rs372503570 1815 dbSNP
rs1167574584 1816 dbSNP
rs558952051 1831 dbSNP
rs1422574384 1837 dbSNP
rs944710987 1843 dbSNP
rs538659080 1852 dbSNP
rs910543273 1874 dbSNP
rs577039272 1875 dbSNP
rs1258764754 1877 dbSNP
rs1483998587 1883 dbSNP
rs1256191943 1897 dbSNP
rs1303696561 1899 dbSNP
rs1187480564 1904 dbSNP
rs910623615 1917 dbSNP
rs925136074 1918 dbSNP
rs979272398 1926 dbSNP
rs1264922190 1928 dbSNP
rs966544510 1931 dbSNP
rs1467769081 1937 dbSNP
rs73065295 1941 dbSNP
rs913643290 1943 dbSNP
rs869239432 1944 dbSNP
rs1487703184 1945 dbSNP
rs139371195 1946 dbSNP
rs148985534 1946 dbSNP
rs150001363 1946 dbSNP
rs3029916 1946 dbSNP
rs755448776 1946 dbSNP
rs768165860 1946 dbSNP
rs1265510953 1949 dbSNP
rs1223159380 1953 dbSNP
rs1050978617 1959 dbSNP
rs866785779 1967 dbSNP
rs1313811364 1970 dbSNP
rs1210375278 1974 dbSNP
rs553799532 1975 dbSNP
rs1311836418 1976 dbSNP
rs920381778 1977 dbSNP
rs1484502136 1988 dbSNP
rs1206615190 1994 dbSNP
rs1342094018 1997 dbSNP
rs180840948 2001 dbSNP
rs1399601952 2002 dbSNP
rs568142053 2005 dbSNP
rs927904664 2013 dbSNP
rs1406222403 2017 dbSNP
rs1435327781 2018 dbSNP
rs952287710 2023 dbSNP
rs1394663559 2038 dbSNP
rs1295345897 2039 dbSNP
rs1027836131 2045 dbSNP
rs1355194799 2046 dbSNP
rs1441388872 2047 dbSNP
rs1456403352 2055 dbSNP
rs1349810763 2071 dbSNP
rs981726088 2072 dbSNP
rs994091808 2077 dbSNP
rs1345218525 2084 dbSNP
rs897957664 2086 dbSNP
rs969490561 2107 dbSNP
rs1436779113 2116 dbSNP
rs1040891543 2124 dbSNP
rs1008979531 2125 dbSNP
rs889141258 2127 dbSNP
rs1394871428 2128 dbSNP
rs1452740445 2130 dbSNP
rs1467530914 2142 dbSNP
rs1023378185 2143 dbSNP
rs989674193 2144 dbSNP
rs1420304657 2152 dbSNP
rs1050404392 2161 dbSNP
rs935957778 2162 dbSNP
rs548030263 2169 dbSNP
rs10418795 2178 dbSNP
rs775404561 2181 dbSNP
rs1477284591 2190 dbSNP
rs1436811575 2195 dbSNP
rs1270458972 2203 dbSNP
rs1267541723 2204 dbSNP
rs1212258057 2222 dbSNP
rs1033145813 2230 dbSNP
rs1192435008 2232 dbSNP
rs1214869270 2241 dbSNP
rs568624310 2243 dbSNP
rs945212179 2245 dbSNP
rs1190734925 2246 dbSNP
rs903417128 2252 dbSNP
rs1019235889 2257 dbSNP
rs992357865 2258 dbSNP
rs1416053175 2265 dbSNP
rs1008891439 2266 dbSNP
rs1199172952 2269 dbSNP
rs926323493 2270 dbSNP
rs1458653215 2272 dbSNP
rs1318761312 2275 dbSNP
rs1325439614 2277 dbSNP
rs889152300 2281 dbSNP
rs1050449186 2283 dbSNP
rs930686180 2284 dbSNP
rs1355616796 2289 dbSNP
rs1234428890 2296 dbSNP
rs1273168929 2297 dbSNP
rs397828845 2303 dbSNP
rs34263491 2304 dbSNP
rs993755908 2305 dbSNP
rs113735874 2306 dbSNP
rs1285406002 2308 dbSNP
rs962561082 2310 dbSNP
rs1191381980 2319 dbSNP
rs745871375 2330 dbSNP
rs899267180 2336 dbSNP
rs1475604287 2337 dbSNP
rs778828351 2338 dbSNP
rs1385190680 2346 dbSNP
rs1366938722 2352 dbSNP
rs1473545991 2360 dbSNP
rs1332684778 2363 dbSNP
rs1467615067 2369 dbSNP
rs1398592035 2373 dbSNP
rs1335848226 2376 dbSNP
rs1375502088 2377 dbSNP
rs1019091933 2380 dbSNP
rs1290941543 2384 dbSNP
rs147628017 2386 dbSNP
rs889217894 2390 dbSNP
rs1280495886 2396 dbSNP
rs1029057717 2397 dbSNP
rs1170429851 2405 dbSNP
rs1282785954 2407 dbSNP
rs190727700 2408 dbSNP
rs770799160 2409 dbSNP
rs1177729746 2413 dbSNP
rs1044069954 2421 dbSNP
rs1439424189 2427 dbSNP
rs111988613 2437 dbSNP
rs1362998349 2440 dbSNP
rs892318514 2440 dbSNP
rs186318615 2441 dbSNP
rs1395272371 2442 dbSNP
rs1433742671 2443 dbSNP
rs1179255928 2445 dbSNP
rs749393246 2445 dbSNP
rs12975378 2448 dbSNP
rs1459021358 2453 dbSNP
rs181695021 2463 dbSNP
rs1393629149 2470 dbSNP
rs374446288 2489 dbSNP
rs1335513508 2500 dbSNP
rs139220369 2508 dbSNP
rs1306111282 2516 dbSNP
rs1348801628 2532 dbSNP
rs980451124 2547 dbSNP
rs930343840 2552 dbSNP
rs1258006565 2557 dbSNP
rs1341633478 2562 dbSNP
rs1231308021 2564 dbSNP
rs920256614 2582 dbSNP
rs1311716478 2587 dbSNP
rs1310072933 2600 dbSNP
rs1436042779 2610 dbSNP
rs777675320 2628 dbSNP
rs866617617 2630 dbSNP
rs114369505 2636 dbSNP
rs1171423612 2638 dbSNP
rs766627698 2645 dbSNP
rs371065203 2662 dbSNP
rs189899479 2666 dbSNP
rs1396340895 2668 dbSNP
rs1304272067 2669 dbSNP
rs1009521768 2679 dbSNP
rs1464229179 2698 dbSNP
rs889381510 2703 dbSNP
rs1390180101 2723 dbSNP
rs1328265994 2726 dbSNP
rs1029378858 2727 dbSNP
rs1158735712 2729 dbSNP
rs994864845 2734 dbSNP
rs1440924814 2735 dbSNP
rs1000274871 2739 dbSNP
rs899239232 2743 dbSNP
rs185426057 2748 dbSNP
rs1442838261 2750 dbSNP
rs181268652 2755 dbSNP
rs1199014331 2757 dbSNP
rs1020266459 2763 dbSNP
rs1009928557 2768 dbSNP
rs1467903789 2773 dbSNP
rs1191323565 2777 dbSNP
rs1263355713 2778 dbSNP
rs940522947 2792 dbSNP
rs1428770938 2798 dbSNP
rs1242444988 2800 dbSNP
rs1191773166 2814 dbSNP
rs1370849859 2815 dbSNP
rs1464517550 2826 dbSNP
rs1351538079 2832 dbSNP
rs1167809240 2838 dbSNP
rs188692853 2850 dbSNP
rs1246132117 2853 dbSNP
rs756402356 2855 dbSNP
rs750610554 2857 dbSNP
rs1294932838 2864 dbSNP
rs1395747542 2869 dbSNP
rs905001828 2870 dbSNP
rs868697634 2875 dbSNP
rs1298380807 2893 dbSNP
rs1235035416 2895 dbSNP
rs1156388542 2900 dbSNP
rs1044830885 2901 dbSNP
rs749601369 2912 dbSNP
rs77742885 2912 dbSNP
rs930374945 2912 dbSNP
rs947931906 2913 dbSNP
rs1358048116 2918 dbSNP
rs750559655 2919 dbSNP
rs553364103 2920 dbSNP
rs1419166445 2925 dbSNP
rs1473082156 2926 dbSNP
rs1163055737 2932 dbSNP
rs936349889 2944 dbSNP
rs1454487284 2947 dbSNP
rs1185151429 2949 dbSNP
rs923677414 2954 dbSNP
rs56278798 2955 dbSNP
rs965125405 2956 dbSNP
rs183644858 2957 dbSNP
rs1029163843 2960 dbSNP
rs978866157 2962 dbSNP
rs755392574 2963 dbSNP
rs373705806 2966 dbSNP
rs1258631337 2971 dbSNP
rs1486468147 2982 dbSNP
rs1010258284 2991 dbSNP
rs1029272503 2993 dbSNP
rs992707846 2994 dbSNP
rs1210922392 3006 dbSNP
rs960275342 3008 dbSNP
rs1359088542 3014 dbSNP
rs995234609 3016 dbSNP
rs191495633 3019 dbSNP
rs1014961853 3023 dbSNP
rs1004883748 3027 dbSNP
rs1410584607 3035 dbSNP
rs375684432 3038 dbSNP
rs1003411443 3039 dbSNP
rs1436828804 3067 dbSNP
rs906634927 3070 dbSNP
rs1374995371 3076 dbSNP
rs1445715795 3083 dbSNP
rs1046629669 3085 dbSNP
rs1373751956 3087 dbSNP
rs763510156 3091 dbSNP
rs1044861627 3093 dbSNP
rs558349374 3094 dbSNP
rs538189429 3095 dbSNP
rs753425900 3102 dbSNP
rs189364270 3114 dbSNP
rs1405373082 3123 dbSNP
rs936317223 3125 dbSNP
rs1036483146 3126 dbSNP
rs763488863 3128 dbSNP
rs1392835488 3129 dbSNP
rs940375959 3132 dbSNP
rs566336929 3135 dbSNP
rs943740093 3136 dbSNP
rs932205012 3140 dbSNP
rs922124172 3144 dbSNP
rs1424038845 3148 dbSNP
rs1394536769 3154 dbSNP
rs1412879110 3158 dbSNP
rs978938787 3159 dbSNP
rs1354992014 3160 dbSNP
rs912331139 3172 dbSNP
rs760433504 3173 dbSNP
rs1373003041 3178 dbSNP
rs1241689793 3184 dbSNP
rs1199675320 3185 dbSNP
rs913321507 3186 dbSNP
rs1453356470 3190 dbSNP
rs953601576 3192 dbSNP
rs922170718 3203 dbSNP
rs546622691 3207 dbSNP
rs963600990 3210 dbSNP
rs7259654 3223 dbSNP
rs1004855615 3233 dbSNP
rs1204518726 3234 dbSNP
rs1256545103 3236 dbSNP
rs970764447 3236 dbSNP
rs1260390302 3239 dbSNP
rs1194469683 3242 dbSNP
rs1252569622 3246 dbSNP
rs774999883 3252 dbSNP
rs1477176337 3254 dbSNP
rs1025082525 3257 dbSNP
rs1188301885 3261 dbSNP
rs115055294 3263 dbSNP
rs1168524402 3264 dbSNP
rs895016115 3266 dbSNP
rs1461730131 3271 dbSNP
rs1324993214 3281 dbSNP
rs1359444626 3285 dbSNP
rs1269187765 3292 dbSNP
rs1436599429 3293 dbSNP
rs1054027601 3298 dbSNP
rs1000750879 3307 dbSNP
rs1270266286 3308 dbSNP
rs1360734399 3323 dbSNP
rs1218538728 3332 dbSNP
rs551160499 3333 dbSNP
rs1332298240 3341 dbSNP
rs1321551533 3343 dbSNP
rs902443926 3352 dbSNP
rs1042051492 3357 dbSNP
rs943707534 3370 dbSNP
rs1214654202 3396 dbSNP
rs1400843782 3398 dbSNP
rs1289637277 3403 dbSNP
rs1023482054 3406 dbSNP
rs539564774 3412 dbSNP
rs1463801418 3419 dbSNP
rs1419108110 3423 dbSNP
rs1242768136 3424 dbSNP
rs994631956 3428 dbSNP
rs1173325419 3432 dbSNP
rs1049530793 3433 dbSNP
rs759341478 3438 dbSNP
rs1419876768 3440 dbSNP
rs922085289 3442 dbSNP
rs973552531 3443 dbSNP
rs774083732 3452 dbSNP
rs908154976 3453 dbSNP
rs1402072284 3466 dbSNP
rs983400001 3470 dbSNP
rs890152534 3473 dbSNP
rs148496726 3480 dbSNP
rs1397546157 3484 dbSNP
rs970786052 3485 dbSNP
rs1025475660 3495 dbSNP
rs1234448306 3519 dbSNP
rs1479074511 3529 dbSNP
rs565505778 3533 dbSNP
rs770886990 3542 dbSNP
rs1225664374 3543 dbSNP
rs1285163553 3544 dbSNP
rs959726969 3548 dbSNP
rs4801489 3549 dbSNP
rs1259704359 3559 dbSNP
rs1000718337 3562 dbSNP
rs1485954724 3564 dbSNP
rs1186819089 3571 dbSNP
rs922197806 3586 dbSNP
rs1043293329 3593 dbSNP
rs1240507167 3594 dbSNP
rs528624764 3600 dbSNP
rs559482564 3623 dbSNP
rs947589773 3629 dbSNP
rs80032206 3633 dbSNP
rs1375599259 3635 dbSNP
rs4801488 3641 dbSNP
rs960385617 3642 dbSNP
rs1271913098 3643 dbSNP
rs554468092 3645 dbSNP
rs867418633 3656 dbSNP
rs1300612899 3671 dbSNP
rs1350298809 3672 dbSNP
rs1049864261 3673 dbSNP
rs1238331037 3683 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection PAR-CLIP data was present in GSM545217. RNA binding protein: AGO2. Condition:miR-7 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 400720.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 400720.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000425074.3 | 3UTR | UCUAAACAUUUUUGCAAUAAACUGCACAUAUUUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM545217
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-7 transfection
Location of target site ENST00000425074.3 | 3UTR | UCUAAACAUUUUUGCAAUAAACUGCACAUAUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000425074.3 | 3UTR | UCUAAACAUUUUUGCAAUAAACUGCACAUAUUUAUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000425074.3 | 3UTR | UCUAAACAUUUUUGCAAUAAACUGCACAUAUUUAUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE14794 Lymphoblastoid cells 0.184 4.1e-2 0.178 4.7e-2 90 Click to see details
GSE26953 Aortic valvular endothelial cells 0.288 8.6e-2 0.347 4.8e-2 24 Click to see details
GSE21849 B cell lymphoma -0.242 1.0e-1 -0.050 4.0e-1 29 Click to see details
GSE42095 Differentiated embryonic stem cells 0.238 1.4e-1 0.147 2.5e-1 23 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.206 1.6e-1 0.208 1.6e-1 25 Click to see details
GSE15076 Monocyte-derived dendritic cells -0.553 1.7e-1 -0.600 1.4e-1 5 Click to see details
GSE27834 Pluripotent stem cells -0.239 1.9e-1 -0.244 1.8e-1 16 Click to see details
GSE28260 Renal cortex and medulla 0.237 2.2e-1 0.194 2.6e-1 13 Click to see details
GSE38226 Liver fibrosis -0.169 2.3e-1 -0.227 1.6e-1 21 Click to see details
GSE28544 Breast cancer 0.154 2.4e-1 0.212 1.6e-1 24 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.086 3.6e-1 -0.051 4.2e-1 20 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.086 3.6e-1 -0.051 4.2e-1 20 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
255 hsa-miR-367-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055315 DUSP5 dual specificity phosphatase 5 2 8
MIRT055791 PLEKHA1 pleckstrin homology domain containing A1 2 12
MIRT057114 DDIT4 DNA damage inducible transcript 4 2 4
MIRT059663 GATAD2B GATA zinc finger domain containing 2B 2 2
MIRT059926 ZDHHC5 zinc finger DHHC-type containing 5 2 2
MIRT061610 BTG2 BTG anti-proliferation factor 2 2 6
MIRT066478 HMGA2 high mobility group AT-hook 2 2 2
MIRT069388 ZFYVE21 zinc finger FYVE-type containing 21 2 2
MIRT069972 GEMIN2 gem nuclear organelle associated protein 2 2 2
MIRT074764 CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 2 2
MIRT076199 GID4 GID complex subunit 4 homolog 2 6
MIRT077512 UBE2Z ubiquitin conjugating enzyme E2 Z 2 4
MIRT077903 TOB1 transducer of ERBB2, 1 2 6
MIRT082250 MED29 mediator complex subunit 29 2 4
MIRT082434 CIC capicua transcriptional repressor 2 6
MIRT082474 PPP1R37 protein phosphatase 1 regulatory subunit 37 2 2
MIRT082778 ZNF264 zinc finger protein 264 2 2
MIRT084533 BCL2L11 BCL2 like 11 2 8
MIRT085309 UBXN4 UBX domain protein 4 2 8
MIRT086365 SSFA2 sperm specific antigen 2 2 8
MIRT087455 NF2 neurofibromin 2 2 2
MIRT088865 FOXN2 forkhead box N2 2 12
MIRT092185 ITPR1 inositol 1,4,5-trisphosphate receptor type 1 2 6
MIRT092326 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT093533 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 6
MIRT096935 PAPD7 poly(A) RNA polymerase D7, non-canonical 2 8
MIRT097026 MAP1B microtubule associated protein 1B 2 4
MIRT099137 MYLIP myosin regulatory light chain interacting protein 2 6
MIRT099905 SOX4 SRY-box 4 2 12
MIRT102289 DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 2 10
MIRT102507 KLHDC10 kelch domain containing 10 2 2
MIRT102891 INSIG1 insulin induced gene 1 2 2
MIRT109188 VMA21 VMA21, vacuolar ATPase assembly factor 2 4
MIRT124567 PRRC2B proline rich coiled-coil 2B 2 2
MIRT135568 SPRYD4 SPRY domain containing 4 2 2
MIRT161135 SLC25A36 solute carrier family 25 member 36 2 6
MIRT163995 KIAA1109 KIAA1109 2 4
MIRT164689 RNF4 ring finger protein 4 2 2
MIRT167705 HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 2 8
MIRT178956 USP28 ubiquitin specific peptidase 28 2 2
MIRT185717 ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 2 2
MIRT186264 TCEB3 elongin A 2 2
MIRT186537 TWF1 twinfilin actin binding protein 1 2 4
MIRT186628 COX20 COX20, cytochrome c oxidase assembly factor 2 8
MIRT189373 TXLNA taxilin alpha 2 4
MIRT197013 EIF1 eukaryotic translation initiation factor 1 2 10
MIRT206437 YIPF4 Yip1 domain family member 4 2 2
MIRT211228 FGF2 fibroblast growth factor 2 2 10
MIRT214529 C5ORF24 chromosome 5 open reading frame 24 2 2
MIRT216034 IL6ST interleukin 6 signal transducer 2 10
MIRT218084 TULP4 tubby like protein 4 2 2
MIRT242418 CCDC113 coiled-coil domain containing 113 2 2
MIRT243162 SOX11 SRY-box 11 2 2
MIRT250943 CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 2 4
MIRT253350 ZNF417 zinc finger protein 417 2 2
MIRT271968 ARF1 ADP ribosylation factor 1 2 2
MIRT273214 ZNF695 zinc finger protein 695 2 4
MIRT296114 SLC12A5 solute carrier family 12 member 5 2 2
MIRT301711 TEF TEF, PAR bZIP transcription factor 2 2
MIRT316477 ARID1B AT-rich interaction domain 1B 2 6
MIRT322174 CLN8 CLN8, transmembrane ER and ERGIC protein 2 4
MIRT341538 CNIH1 cornichon family AMPA receptor auxiliary protein 1 2 6
MIRT356062 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT443579 PPIC peptidylprolyl isomerase C 2 2
MIRT448825 FKBP1A FK506 binding protein 1A 2 4
MIRT451494 FOPNL FGFR1OP N-terminal like 2 2
MIRT452694 MDM2 MDM2 proto-oncogene 2 2
MIRT453167 CNOT4 CCR4-NOT transcription complex subunit 4 2 6
MIRT454588 SLC33A1 solute carrier family 33 member 1 2 4
MIRT455794 TAF8 TATA-box binding protein associated factor 8 2 4
MIRT456010 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456044 KIAA1586 KIAA1586 2 2
MIRT456763 TMEM239 transmembrane protein 239 2 4
MIRT458068 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT459230 MRPS21 mitochondrial ribosomal protein S21 2 2
MIRT459534 MFF mitochondrial fission factor 2 6
MIRT459759 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT460236 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT461104 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462924 ZNRF3 zinc and ring finger 3 2 2
MIRT463476 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463516 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT465503 TOR1B torsin family 1 member B 2 2
MIRT469525 RBFOX2 RNA binding protein, fox-1 homolog 2 2 8
MIRT470079 PTGES2 prostaglandin E synthase 2 2 2
MIRT471581 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT473451 MCOLN2 mucolipin 2 2 8
MIRT475882 H3F3C H3 histone family member 3C 2 10
MIRT475915 H3F3B H3 histone family member 3B 2 8
MIRT476195 GOLGA8A golgin A8 family member A 2 10
MIRT476318 GM2A GM2 ganglioside activator 2 2
MIRT476676 FUT11 fucosyltransferase 11 2 10
MIRT478368 DDI2 DNA damage inducible 1 homolog 2 2 2
MIRT479545 CDC5L cell division cycle 5 like 2 2
MIRT481024 BAZ2B bromodomain adjacent to zinc finger domain 2B 2 2
MIRT491009 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT493168 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT494345 CASKIN1 CASK interacting protein 1 2 2
MIRT499087 ZDHHC21 zinc finger DHHC-type containing 21 2 6
MIRT500029 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501298 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 4
MIRT503124 BCL11B B-cell CLL/lymphoma 11B 2 8
MIRT503301 GTF2A1 general transcription factor IIA subunit 1 2 6
MIRT504328 ASGR2 asialoglycoprotein receptor 2 2 6
MIRT504471 EID2B EP300 interacting inhibitor of differentiation 2B 2 2
MIRT504655 RPL9 ribosomal protein L9 2 6
MIRT505331 TMF1 TATA element modulatory factor 1 2 8
MIRT505732 SERTAD3 SERTA domain containing 3 2 4
MIRT505827 RSBN1 round spermatid basic protein 1 2 8
MIRT506004 PURG purine rich element binding protein G 2 8
MIRT506308 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 2 6
MIRT506806 KLHL15 kelch like family member 15 2 6
MIRT507119 GOLGA8B golgin A8 family member B 2 6
MIRT507353 FAM129A family with sequence similarity 129 member A 2 6
MIRT507591 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT507674 CPEB4 cytoplasmic polyadenylation element binding protein 4 2 4
MIRT507703 CNOT2 CCR4-NOT transcription complex subunit 2 2 8
MIRT508012 BCAT1 branched chain amino acid transaminase 1 2 4
MIRT510439 ZIC5 Zic family member 5 2 6
MIRT510539 XKR7 XK related 7 2 4
MIRT510600 TPPP tubulin polymerization promoting protein 2 6
MIRT511060 NRAS NRAS proto-oncogene, GTPase 2 4
MIRT511855 GOLGA8J golgin A8 family member J 2 6
MIRT511865 GOLGA8I golgin A8 family member I, pseudogene 1 3
MIRT512570 CTDSPL CTD small phosphatase like 2 2
MIRT512708 ZNF134 zinc finger protein 134 2 6
MIRT513177 MOAP1 modulator of apoptosis 1 2 6
MIRT513783 PAWR pro-apoptotic WT1 regulator 2 6
MIRT515099 IRGQ immunity related GTPase Q 2 2
MIRT515481 INCENP inner centromere protein 2 4
MIRT517416 BMP8A bone morphogenetic protein 8a 2 2
MIRT518754 C1orf35 chromosome 1 open reading frame 35 2 2
MIRT519780 ZNF354B zinc finger protein 354B 2 4
MIRT519865 ZFP62 ZFP62 zinc finger protein 2 6
MIRT520510 TRAM2 translocation associated membrane protein 2 2 6
MIRT521068 SLC25A32 solute carrier family 25 member 32 2 6
MIRT526912 ZNF772 zinc finger protein 772 2 6
MIRT527134 GULP1 GULP, engulfment adaptor PTB domain containing 1 2 2
MIRT527867 SLC39A14 solute carrier family 39 member 14 2 2
MIRT528404 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT532956 ZNF24 zinc finger protein 24 2 4
MIRT533021 ZFC3H1 zinc finger C3H1-type containing 2 4
MIRT533191 WASL Wiskott-Aldrich syndrome like 2 6
MIRT534191 SLC7A11 solute carrier family 7 member 11 2 2
MIRT534961 PTAR1 protein prenyltransferase alpha subunit repeat containing 1 2 4
MIRT536396 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT537046 GRAMD4 GRAM domain containing 4 2 2
MIRT537125 GOLGA3 golgin A3 2 4
MIRT537183 GFPT2 glutamine-fructose-6-phosphate transaminase 2 2 4
MIRT537652 ERGIC2 ERGIC and golgi 2 2 4
MIRT538632 CCSER2 coiled-coil serine rich protein 2 2 4
MIRT539231 ANP32E acidic nuclear phosphoprotein 32 family member E 2 6
MIRT540099 NPY4R neuropeptide Y receptor Y4 2 2
MIRT540998 ZNF460 zinc finger protein 460 2 4
MIRT541468 AURKA aurora kinase A 2 2
MIRT542680 SESN3 sestrin 3 2 2
MIRT542757 PRRG4 proline rich and Gla domain 4 2 2
MIRT542863 NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 2 2
MIRT542925 HOXC8 homeobox C8 2 2
MIRT543747 SZRD1 SUZ RNA binding domain containing 1 2 2
MIRT544404 ZSCAN12 zinc finger and SCAN domain containing 12 2 2
MIRT544583 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 4
MIRT544662 MED19 mediator complex subunit 19 2 2
MIRT545251 GTF2E1 general transcription factor IIE subunit 1 2 2
MIRT545261 TRIM36 tripartite motif containing 36 2 4
MIRT545744 UHRF1BP1 UHRF1 binding protein 1 2 2
MIRT545999 WDR81 WD repeat domain 81 2 2
MIRT546038 VPS4B vacuolar protein sorting 4 homolog B 2 2
MIRT547170 PDZD8 PDZ domain containing 8 2 2
MIRT547273 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT547729 KIF5B kinesin family member 5B 2 2
MIRT548127 GATA6 GATA binding protein 6 2 2
MIRT548203 FNIP1 folliculin interacting protein 1 2 2
MIRT548756 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT549641 ZNF75A zinc finger protein 75a 2 2
MIRT549684 ZNF598 zinc finger protein 598 2 2
MIRT550197 MRO maestro 2 2
MIRT550340 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT550536 MYZAP myocardial zonula adherens protein 2 2
MIRT550975 TOR4A torsin family 4 member A 2 2
MIRT551221 CIDEC cell death inducing DFFA like effector c 2 2
MIRT551355 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT551571 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT552277 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552661 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT553081 UCK2 uridine-cytidine kinase 2 2 2
MIRT553753 TBC1D8 TBC1 domain family member 8 2 2
MIRT554030 SPCS3 signal peptidase complex subunit 3 2 2
MIRT554099 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT554155 SLX4 SLX4 structure-specific endonuclease subunit 2 2
MIRT554815 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT555522 PMEPA1 prostate transmembrane protein, androgen induced 1 2 2
MIRT555597 PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma 2 2
MIRT555632 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 4
MIRT555679 PGAM4 phosphoglycerate mutase family member 4 2 4
MIRT555827 PAX9 paired box 9 2 2
MIRT555868 PAIP1 poly(A) binding protein interacting protein 1 2 2
MIRT555939 NUP43 nucleoporin 43 2 2
MIRT555994 NFYB nuclear transcription factor Y subunit beta 2 2
MIRT556340 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT556432 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT556585 LHFPL2 LHFPL tetraspan subfamily member 2 2 4
MIRT556801 KIAA1958 KIAA1958 2 2
MIRT558047 EXOC5 exocyst complex component 5 2 2
MIRT558697 CLTA clathrin light chain A 2 2
MIRT559191 BMPR1A bone morphogenetic protein receptor type 1A 2 4
MIRT559639 AKAP10 A-kinase anchoring protein 10 2 2
MIRT559707 AEN apoptosis enhancing nuclease 2 2
MIRT560673 SRFBP1 serum response factor binding protein 1 2 2
MIRT560990 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT562170 HOXA13 homeobox A13 2 2
MIRT562275 GNAQ G protein subunit alpha q 2 2
MIRT563624 ZNF277 zinc finger protein 277 2 2
MIRT563815 FMN1 formin 1 2 2
MIRT564096 TLR3 toll like receptor 3 2 2
MIRT565320 TMEM41A transmembrane protein 41A 2 2
MIRT565986 RNF44 ring finger protein 44 2 2
MIRT566047 REV3L REV3 like, DNA directed polymerase zeta catalytic subunit 2 2
MIRT568236 C11orf24 chromosome 11 open reading frame 24 2 2
MIRT568310 BAK1 BCL2 antagonist/killer 1 2 2
MIRT572376 ATOX1 antioxidant 1 copper chaperone 2 2
MIRT574822 CPEB3 cytoplasmic polyadenylation element binding protein 3 2 2
MIRT609212 PELP1 proline, glutamate and leucine rich protein 1 2 2
MIRT616217 RBM27 RNA binding motif protein 27 2 2
MIRT629087 FASLG Fas ligand 2 2
MIRT632124 FKBP9 FK506 binding protein 9 2 2
MIRT632576 POLQ DNA polymerase theta 2 2
MIRT634799 ENTHD1 ENTH domain containing 1 2 2
MIRT636553 ESRP1 epithelial splicing regulatory protein 1 2 2
MIRT640977 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT653875 SH2B3 SH2B adaptor protein 3 2 2
MIRT655598 OTUD7B OTU deubiquitinase 7B 2 2
MIRT659764 CCDC171 coiled-coil domain containing 171 2 2
MIRT660744 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT681037 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT682305 RBM28 RNA binding motif protein 28 2 2
MIRT682573 EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 2 2
MIRT686217 ZNF267 zinc finger protein 267 2 2
MIRT687209 PLXNA3 plexin A3 2 2
MIRT690630 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT692419 AGMAT agmatinase 2 2
MIRT694437 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT700725 PNO1 partner of NOB1 homolog 2 2
MIRT701549 NARF nuclear prelamin A recognition factor 2 2
MIRT704379 DAND5 DAN domain BMP antagonist family member 5 2 2
MIRT707935 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 2
MIRT709939 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT711371 MED7 mediator complex subunit 7 2 2
MIRT712327 PER2 period circadian clock 2 2 2
MIRT714515 SHE Src homology 2 domain containing E 2 2
MIRT715520 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT724294 OSMR oncostatin M receptor 2 2
MIRT725358 MUC21 mucin 21, cell surface associated 2 2
MIRT732242 KLF4 Kruppel like factor 4 3 1
MIRT735384 SPAG5 sperm associated antigen 5 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-367 Medpor NULL NULL Microarray osteoblast-like cells line (MG-63) 18408260 2008 up-regulated
miR-367 Activin A NULL 229455 Quantitative real-time PCR Human embryonic stem (hES) cells 19885849 2010 up-regulated
miR-367 Mistletoe lectin-I NULL NULL Microarray colorectal cancer cells CLY cells 20955366 2011 down-regulated
miR-367 Doxorubicin approved 31703 Quantitative real-time PCR heart 22859947 2012 up-regulated
miR-367 Paclitaxel approved 36314 Microarray Ovarian cancer cell lines 24220856 2014 up-regulated
miR-367 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-367 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Siop Treatment Protocol sensitive High Nephroblastoma tissue
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved resistant High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved sensitive High Hepatocellular Carcinoma tissue and cell line (HepG2)
hsa-miR-367-3p Mitoxantrone 4212 NSC279836 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Sorafenib 216239 NSC747971 approved sensitive Low Hepatocellular Carcinoma cell line (SKhep1, HA22T)
hsa-miR-367-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM16)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-367-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved resistant cell line (IGROV-1)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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