pre-miRNA Information
pre-miRNA hsa-mir-548t   
Genomic Coordinates chr4: 173268160 - 173268233
Description Homo sapiens miR-548t stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-548t-3p
Sequence 46| AAAAACCACAAUUACUUUUGCACCA |70
Evidence Not_experimental
Experiments
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 2 4 + 173268206 29233923 MiREDiBase
A-to-I 3 4 + 173268207 29233923 MiREDiBase
A-to-I 4 4 + 173268208 29233923 MiREDiBase
A-to-I 10 4 + 173268214 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs73872515 5 dbSNP
rs1426966747 6 dbSNP
rs1158401109 21 dbSNP
rs943938928 24 dbSNP
Putative Targets

Gene Information
Gene Symbol FBLN2   
Synonyms -
Description fibulin 2
Transcript NM_001004019   
Other Transcripts NM_001165035 , NM_001998   
Expression
Putative miRNA Targets on FBLN2
3'UTR of FBLN2
(miRNA target sites are highlighted)
>FBLN2|NM_001004019|3'UTR
   1 GGTGCCAGCACGGGCCACCTGCGGGTGTGGCGCAGCCCAGGGCTCACACTGCGTGGGAGGGACTGGGTCACTATTGTGGT
  81 TTTTACTATAACTTTGTAAATTAACTTAATTTTGCTGACTTGACTCCTGTGGCTTCTGGACCCCTCCTCTGCCCCGCAGG
 161 AGGAAGTTCCACGGCAGGTGGTGCGTTCCCACGCAGGCACCAAGTGGAAGCTTGCACGGTGGGCCACGGCCGTGGCGGGT
 241 GCCCTGTGGGTGAGGCTGGGTGATGACCTGAGGACCAGAGACACGCGACCATGTTGGGGCTCTTGGACTCCTCTGGATGA
 321 CCCGTCCCCAAAGTTGACATTCCATTTCATGTTCCACTGTGATTAATTCTTTTCTTTTTTAAAAAATCATTTTAAAGTTT
 401 TTTGTTTAACTATAAAGTAGTACATGTACATTATATAAAAAAAAGTTCAACTAGTATGAAAGGGTTATAAAGTAACAGAG
 481 GAAAACGCCTCTTGGTCCCTTTAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acCACGUUUUC--AU-------UAACACCAAAAa 5'
            ||| :|::|  |:       ||||||||||| 
Target 5' gcGTGGGAGGGACTGGGTCACTATTGTGGTTTTt 3'
51 - 84 161.00 -16.80
2
miRNA  3' accacGUUUUCAUU-----AACACCA---AAAa 5'
               ||:|:| ||     |  ||||   ||| 
Target 5' agtaaCAGAGGAAAACGCCTCTTGGTCCCTTTa 3'
471 - 503 104.00 -9.57
3
miRNA  3' accaCGUUUUCAUU-AA---------CACCAaaaa 5'
              |||::|| || ||         |||||    
Target 5' ccccGCAGGAGGAAGTTCCACGGCAGGTGGTgcgt 3'
152 - 186 97.00 -15.17
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN25247510 7 COSMIC
COSN30502420 23 COSMIC
COSN31495659 23 COSMIC
COSN30165913 24 COSMIC
COSN31553708 32 COSMIC
COSN26169550 62 COSMIC
COSN31814265 67 COSMIC
COSN28866532 85 COSMIC
COSN30108872 104 COSMIC
COSN31523458 105 COSMIC
COSN30191336 132 COSMIC
COSN32056191 173 COSMIC
COSN23987426 194 COSMIC
COSN29463155 220 COSMIC
COSN30604795 233 COSMIC
COSN29513690 237 COSMIC
COSN19748604 238 COSMIC
COSN9974319 270 COSMIC
COSN9974320 277 COSMIC
COSN29513501 286 COSMIC
COSN31564492 287 COSMIC
COSN24641827 288 COSMIC
COSN9974321 290 COSMIC
COSN26678736 316 COSMIC
COSN14035298 370 COSMIC
COSN25544332 399 COSMIC
COSN31522119 408 COSMIC
COSN20098124 437 COSMIC
COSN28013092 437 COSMIC
rs7596 437 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1417966868 6 dbSNP
rs937698489 8 dbSNP
rs747650824 11 dbSNP
rs769639084 12 dbSNP
rs773180546 13 dbSNP
rs990391051 14 dbSNP
rs749191456 15 dbSNP
rs770778645 16 dbSNP
rs914458932 17 dbSNP
rs1470455635 20 dbSNP
rs200806008 23 dbSNP
rs556247082 24 dbSNP
rs1272513823 25 dbSNP
rs1390879013 26 dbSNP
rs1308355025 28 dbSNP
rs370950427 32 dbSNP
rs576053173 33 dbSNP
rs541849507 37 dbSNP
rs1312858343 38 dbSNP
rs34164428 40 dbSNP
rs1324686790 43 dbSNP
rs1205216978 46 dbSNP
rs762400649 51 dbSNP
rs1449528584 52 dbSNP
rs897996761 53 dbSNP
rs998059552 54 dbSNP
rs561510702 64 dbSNP
rs1372098955 80 dbSNP
rs889394135 89 dbSNP
rs1444415822 91 dbSNP
rs141917225 93 dbSNP
rs1473436368 97 dbSNP
rs1376061243 117 dbSNP
rs769000609 124 dbSNP
rs1032377363 126 dbSNP
rs1202591766 127 dbSNP
rs540897395 137 dbSNP
rs200352896 139 dbSNP
rs1275636067 140 dbSNP
rs750746829 144 dbSNP
rs1358501034 145 dbSNP
rs1289370015 147 dbSNP
rs1229935244 149 dbSNP
rs754614393 150 dbSNP
rs1355473459 151 dbSNP
rs780846189 153 dbSNP
rs752266871 156 dbSNP
rs559168695 157 dbSNP
rs888884279 159 dbSNP
rs570964070 163 dbSNP
rs1349460787 168 dbSNP
rs111929034 173 dbSNP
rs534840035 174 dbSNP
rs1484687999 179 dbSNP
rs1003587648 180 dbSNP
rs770788705 182 dbSNP
rs778711885 185 dbSNP
rs745629045 186 dbSNP
rs764947015 188 dbSNP
rs1303039872 189 dbSNP
rs113738289 193 dbSNP
rs775823834 194 dbSNP
rs937960283 199 dbSNP
rs1024963734 204 dbSNP
rs1473625548 211 dbSNP
rs1227554747 212 dbSNP
rs570174991 215 dbSNP
rs1489622615 216 dbSNP
rs906563884 218 dbSNP
rs553147690 219 dbSNP
rs1490783858 222 dbSNP
rs529355274 229 dbSNP
rs1184488560 230 dbSNP
rs113057429 232 dbSNP
rs1036791058 233 dbSNP
rs1283499883 236 dbSNP
rs750074238 237 dbSNP
rs989989401 237 dbSNP
rs1021916375 238 dbSNP
rs1392143188 239 dbSNP
rs762410816 241 dbSNP
rs765795087 243 dbSNP
rs750836932 244 dbSNP
rs763421016 245 dbSNP
rs1439092693 246 dbSNP
rs1343317850 249 dbSNP
rs766620045 252 dbSNP
rs1361676669 254 dbSNP
rs1295648084 255 dbSNP
rs1382479031 259 dbSNP
rs1299358966 260 dbSNP
rs967302223 261 dbSNP
rs752459534 262 dbSNP
rs1292416624 264 dbSNP
rs977335932 268 dbSNP
rs1061390 270 dbSNP
rs1241354775 275 dbSNP
rs1061398 277 dbSNP
rs1187393100 279 dbSNP
rs1250114235 280 dbSNP
rs1442869124 281 dbSNP
rs879340267 282 dbSNP
rs148527523 285 dbSNP
rs941810415 286 dbSNP
rs571873622 287 dbSNP
rs537688437 288 dbSNP
rs12968 290 dbSNP
rs1322151847 291 dbSNP
rs1380038066 292 dbSNP
rs1451317634 294 dbSNP
rs1315076724 298 dbSNP
rs1380678923 304 dbSNP
rs775105350 307 dbSNP
rs898014315 308 dbSNP
rs929563596 309 dbSNP
rs1046657496 319 dbSNP
rs906785275 321 dbSNP
rs762638113 322 dbSNP
rs77983433 324 dbSNP
rs1033711341 325 dbSNP
rs112258236 329 dbSNP
rs1270253975 332 dbSNP
rs1011431018 333 dbSNP
rs1460113792 334 dbSNP
rs1468315331 335 dbSNP
rs1021445908 339 dbSNP
rs1203248995 349 dbSNP
rs1280910018 352 dbSNP
rs3202499 357 dbSNP
rs758320333 362 dbSNP
rs14468 370 dbSNP
rs1186506949 379 dbSNP
rs1202430463 381 dbSNP
rs555361135 381 dbSNP
rs1473817377 387 dbSNP
rs1482006862 388 dbSNP
rs1257283989 389 dbSNP
rs998663520 391 dbSNP
rs1295849521 395 dbSNP
rs1176045411 398 dbSNP
rs1407820124 410 dbSNP
rs7820 411 dbSNP
rs954635803 415 dbSNP
rs1314999595 422 dbSNP
rs985753059 425 dbSNP
rs1187575360 428 dbSNP
rs1404408881 429 dbSNP
rs1392594148 430 dbSNP
rs540934222 431 dbSNP
rs71773469 432 dbSNP
rs1376503854 435 dbSNP
rs963143481 435 dbSNP
rs68091511 436 dbSNP
rs7596 437 dbSNP
rs929423473 437 dbSNP
rs959198706 445 dbSNP
rs928192136 446 dbSNP
rs1480066385 449 dbSNP
rs938282335 450 dbSNP
rs1207685024 454 dbSNP
rs984005553 458 dbSNP
rs1291561804 465 dbSNP
rs375077326 485 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 2199.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000404922.3 | 3UTR | UUUUACUAUAACUUUGUAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
168 hsa-miR-548t-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059365 ANP32E acidic nuclear phosphoprotein 32 family member E 2 2
MIRT072839 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 2 6
MIRT076945 PCGF2 polycomb group ring finger 2 2 6
MIRT083941 TFAP2C transcription factor AP-2 gamma 2 2
MIRT085401 ETS2 ETS proto-oncogene 2, transcription factor 2 2
MIRT109790 KLHL15 kelch like family member 15 2 2
MIRT114046 AKAP11 A-kinase anchoring protein 11 2 10
MIRT130165 TXNIP thioredoxin interacting protein 2 6
MIRT150013 MIDN midnolin 2 2
MIRT181258 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT205594 NCL nucleolin 2 2
MIRT222253 ACTB actin beta 2 4
MIRT245653 EIF5AL1 eukaryotic translation initiation factor 5A-like 1 2 4
MIRT250947 CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 2 4
MIRT252497 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT271990 ARF1 ADP ribosylation factor 1 2 4
MIRT280804 RNF11 ring finger protein 11 2 2
MIRT293803 FEM1A fem-1 homolog A 2 2
MIRT318231 RREB1 ras responsive element binding protein 1 2 2
MIRT341455 ATP6V0B ATPase H+ transporting V0 subunit b 2 2
MIRT347413 CEBPG CCAAT/enhancer binding protein gamma 2 4
MIRT351860 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT357983 GRPEL2 GrpE like 2, mitochondrial 2 2
MIRT377094 PPP1CB protein phosphatase 1 catalytic subunit beta 2 2
MIRT407303 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT441564 LMOD3 leiomodin 3 2 2
MIRT442364 ZC3H12C zinc finger CCCH-type containing 12C 2 2
MIRT443228 ARL5B ADP ribosylation factor like GTPase 5B 2 2
MIRT443404 HMX3 H6 family homeobox 3 2 2
MIRT446055 NR5A2 nuclear receptor subfamily 5 group A member 2 2 2
MIRT448277 ZNF652 zinc finger protein 652 2 2
MIRT450822 KCNB1 potassium voltage-gated channel subfamily B member 1 2 2
MIRT453016 CCDC115 coiled-coil domain containing 115 2 17
MIRT454463 PPP2R2B protein phosphatase 2 regulatory subunit Bbeta 2 2
MIRT456360 CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 2 2
MIRT460007 DNALI1 dynein axonemal light intermediate chain 1 2 2
MIRT463154 ZNF385A zinc finger protein 385A 2 6
MIRT463766 YPEL2 yippee like 2 2 2
MIRT468310 SFT2D2 SFT2 domain containing 2 2 2
MIRT470668 POLR2D RNA polymerase II subunit D 2 4
MIRT478517 CTTN cortactin 2 2
MIRT480507 C11orf57 chromosome 11 open reading frame 57 2 2
MIRT484718 INHBA inhibin beta A subunit 2 12
MIRT485494 HMGN2 high mobility group nucleosomal binding domain 2 2 2
MIRT487302 SLC38A9 solute carrier family 38 member 9 2 2
MIRT487771 ANKEF1 ankyrin repeat and EF-hand domain containing 1 2 16
MIRT491876 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT494304 CEP120 centrosomal protein 120 2 2
MIRT495396 TRIM24 tripartite motif containing 24 2 2
MIRT495646 CDK1 cyclin dependent kinase 1 2 2
MIRT496665 TMEM237 transmembrane protein 237 2 2
MIRT496837 ZNF460 zinc finger protein 460 2 2
MIRT498638 CHD4 chromodomain helicase DNA binding protein 4 2 10
MIRT503928 FBXL13 F-box and leucine rich repeat protein 13 2 4
MIRT506063 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT506582 MIER3 MIER family member 3 2 4
MIRT506606 MAT2A methionine adenosyltransferase 2A 2 4
MIRT506844 KIF23 kinesin family member 23 2 6
MIRT508536 RPP14 ribonuclease P/MRP subunit p14 2 4
MIRT509669 ZNF354B zinc finger protein 354B 2 10
MIRT511170 MBNL3 muscleblind like splicing regulator 3 2 6
MIRT512147 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT512831 ID4 inhibitor of DNA binding 4, HLH protein 2 6
MIRT514558 XRCC3 X-ray repair cross complementing 3 2 4
MIRT515856 AJAP1 adherens junctions associated protein 1 2 4
MIRT521848 PNISR PNN interacting serine and arginine rich protein 2 4
MIRT525364 SYNM synemin 2 2
MIRT527120 ARHGAP15 Rho GTPase activating protein 15 2 2
MIRT527271 FBLN2 fibulin 2 2 2
MIRT527439 COL4A3 collagen type IV alpha 3 chain 2 2
MIRT527658 CD300E CD300e molecule 2 2
MIRT528334 TBC1D22B TBC1 domain family member 22B 2 2
MIRT529033 EXOC8 exocyst complex component 8 2 2
MIRT529321 PDE5A phosphodiesterase 5A 2 2
MIRT529677 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT529846 SMTN smoothelin 2 2
MIRT530385 ZNF431 zinc finger protein 431 2 2
MIRT530913 GPR85 G protein-coupled receptor 85 2 2
MIRT531794 KDR kinase insert domain receptor 2 2
MIRT532246 KLF2 Kruppel like factor 2 2 4
MIRT532658 CBX7 chromobox 7 2 2
MIRT533630 TMX3 thioredoxin related transmembrane protein 3 2 2
MIRT534811 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT534975 PSD3 pleckstrin and Sec7 domain containing 3 2 2
MIRT536588 ITPKB inositol-trisphosphate 3-kinase B 2 2
MIRT536779 HNRNPD heterogeneous nuclear ribonucleoprotein D 2 2
MIRT538764 CABLES1 Cdk5 and Abl enzyme substrate 1 2 2
MIRT539294 ANGEL2 angel homolog 2 2 2
MIRT539621 SHISA9 shisa family member 9 2 2
MIRT539651 BUB1 BUB1 mitotic checkpoint serine/threonine kinase 2 2
MIRT540347 OPHN1 oligophrenin 1 2 2
MIRT540413 PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 2 2
MIRT541396 CDC27 cell division cycle 27 2 2
MIRT542916 HSBP1 heat shock factor binding protein 1 2 2
MIRT544710 EIF5A eukaryotic translation initiation factor 5A 2 4
MIRT544998 MFF mitochondrial fission factor 2 4
MIRT553289 TSPAN3 tetraspanin 3 2 2
MIRT553455 TNRC6C trinucleotide repeat containing 6C 2 2
MIRT553782 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT554656 ROBO1 roundabout guidance receptor 1 2 2
MIRT555104 PURB purine rich element binding protein B 2 2
MIRT557235 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT560861 GAL3ST3 galactose-3-O-sulfotransferase 3 2 2
MIRT561545 SON SON DNA binding protein 2 2
MIRT561554 SLMO2 PRELI domain containing 3B 2 2
MIRT563764 ZNF678 zinc finger protein 678 2 2
MIRT565653 SIX4 SIX homeobox 4 2 2
MIRT568080 CELF2 CUGBP Elav-like family member 2 2 2
MIRT568759 MYBL1 MYB proto-oncogene like 1 2 2
MIRT569078 CADM2 cell adhesion molecule 2 2 2
MIRT569509 THYN1 thymocyte nuclear protein 1 2 2
MIRT571268 CDKN2AIP CDKN2A interacting protein 2 2
MIRT571809 PHF19 PHD finger protein 19 2 2
MIRT572554 DKK3 dickkopf WNT signaling pathway inhibitor 3 2 2
MIRT573782 SLC24A4 solute carrier family 24 member 4 2 4
MIRT576441 Ccdc115 coiled-coil domain containing 115 2 10
MIRT576712 Slc30a3 solute carrier family 30 (zinc transporter), member 3 2 3
MIRT608377 PIWIL2 piwi like RNA-mediated gene silencing 2 2 2
MIRT608484 NKTR natural killer cell triggering receptor 2 6
MIRT610186 FAM49A family with sequence similarity 49 member A 2 2
MIRT611631 EDIL3 EGF like repeats and discoidin domains 3 2 2
MIRT613534 TRA2B transformer 2 beta homolog 2 2
MIRT616221 PTPN11 protein tyrosine phosphatase, non-receptor type 11 2 2
MIRT622370 SALL1 spalt like transcription factor 1 2 2
MIRT624371 CDK12 cyclin dependent kinase 12 2 2
MIRT624995 ZNF665 zinc finger protein 665 2 4
MIRT626875 AP3B1 adaptor related protein complex 3 beta 1 subunit 2 2
MIRT627737 RAP2B RAP2B, member of RAS oncogene family 2 4
MIRT628490 ADAT2 adenosine deaminase, tRNA specific 2 2 2
MIRT633647 PLEKHG7 pleckstrin homology and RhoGEF domain containing G7 2 4
MIRT634028 SLC30A3 solute carrier family 30 member 3 2 3
MIRT635923 GLTSCR2 NOP53 ribosome biogenesis factor 2 2
MIRT638287 SERBP1 SERPINE1 mRNA binding protein 1 2 2
MIRT641959 RNF115 ring finger protein 115 2 2
MIRT643573 CTNNA3 catenin alpha 3 2 2
MIRT645180 NOL9 nucleolar protein 9 2 4
MIRT647497 ZNF639 zinc finger protein 639 2 2
MIRT647682 PCK1 phosphoenolpyruvate carboxykinase 1 2 2
MIRT648422 MYOZ3 myozenin 3 2 2
MIRT650113 ZCCHC9 zinc finger CCHC-type containing 9 2 2
MIRT651076 ZNF518B zinc finger protein 518B 2 4
MIRT651415 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT651456 XKR4 XK related 4 2 2
MIRT653619 SLC30A4 solute carrier family 30 member 4 2 2
MIRT653637 SLC30A1 solute carrier family 30 member 1 2 2
MIRT654896 POU2F1 POU class 2 homeobox 1 2 2
MIRT656483 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT658016 GABRA4 gamma-aminobutyric acid type A receptor alpha4 subunit 2 2
MIRT658041 FZD10 frizzled class receptor 10 2 2
MIRT660093 BTBD3 BTB domain containing 3 2 2
MIRT663923 MAGEF1 MAGE family member F1 2 2
MIRT665882 TGIF2 TGFB induced factor homeobox 2 2 2
MIRT669051 CEP128 centrosomal protein 128 2 2
MIRT669711 AAGAB alpha and gamma adaptin binding protein 2 2
MIRT686812 SNX2 sorting nexin 2 2 4
MIRT689883 SOD2 superoxide dismutase 2 2 2
MIRT693274 GLRX2 glutaredoxin 2 2 4
MIRT697056 BCAR1 BCAR1, Cas family scaffolding protein 2 2
MIRT703297 GID4 GID complex subunit 4 homolog 2 2
MIRT704087 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT707719 CDC6 cell division cycle 6 2 2
MIRT708136 GK5 glycerol kinase 5 (putative) 2 2
MIRT709212 KLHL30 kelch like family member 30 2 2
MIRT710062 RWDD2A RWD domain containing 2A 2 2
MIRT712770 POU6F2 POU class 6 homeobox 2 2 2
MIRT715073 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT715387 TADA3 transcriptional adaptor 3 2 2
MIRT717712 NCKAP1 NCK associated protein 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-548t Paclitaxel 36314 NSC125973 approved sensitive cell line (W1)
hsa-mir-548t Cisplatin 5460033 NSC119875 approved sensitive cell line (W1)
hsa-mir-548t Doxorubicin 31703 NSC123127 approved sensitive cell line (W1)
hsa-mir-548t Topotecan 60699 NSC609699 approved sensitive cell line (W1)
hsa-mir-548t Vincristine 5978 approved sensitive cell line (W1)
hsa-miR-548t-3p Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (SW480, HCT-116)
hsa-miR-548t-3p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-548t-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)

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