miRTarBase - #MIRT527439


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pre-miRNA Information
pre-miRNA hsa-mir-548t   
Genomic Coordinates chr4: 173268160 - 173268233
Description Homo sapiens miR-548t stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-548t-3p
Sequence 46| AAAAACCACAAUUACUUUUGCACCA |70
Evidence Not_experimental
Experiments
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 2 4 + 173268206 29233923 MiREDiBase
A-to-I 3 4 + 173268207 29233923 MiREDiBase
A-to-I 4 4 + 173268208 29233923 MiREDiBase
A-to-I 10 4 + 173268214 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs73872515 5 dbSNP
rs1426966747 6 dbSNP
rs1158401109 21 dbSNP
rs943938928 24 dbSNP
Putative Targets

Gene Information
Gene Symbol COL4A3   
Synonyms -
Description collagen type IV alpha 3 chain
Transcript NM_000091   
Expression
Putative miRNA Targets on COL4A3
3'UTR of COL4A3
(miRNA target sites are highlighted)		 
>COL4A3|NM_000091|3'UTR
   1 AGCTAAAAAAGACAGCAGAACTGCTATTTTTCATCCTAAAGAACAAAGTAATGACAGAACATGCTGTTATTTAGGTATTT
  81 TTCTTTAACCAAACAATATTGCTCCATGATGACTTAGTACAAAGTTTCAATTTGTTTCCCCACAAAACAAAGCAATTCTT
 161 TCAAGTCAGTTCTGTGATCTGGGTCTCTAATCTGTGCTGTTTCAAAGTTCTCTGTGGCAAAGCAGCAACTATTCACAAAA
 241 TATCACCAAAAACCTATTCCACTTACATCCAAGGCACTGTCACTACGGTGATTGTATGAAGTTTGAATGCTGCAAGTTAT
 321 GAAATATTTGGCCCGCTGGATTCCCACATTTGTCTTCTTTCTGTCTTTAAGACTCAGGGAGGCTAAATCAGTGTTTGATT
 401 GCCCCGCCAACCCTTCCTGAAACTTCAGACCCTGGGTAGGGGAAGAGAAGGGGGCATGTGGTATCCTGGAGCATTGTGTA
 481 TAGAACTGGATTTTCAGACCTGCTGAGGACCGTAAGGCCTGATGGAACACAGAACTGAACTGAGGTTCATGGATTTTCCA
 561 GGACTGTTTCAAACATGCCCATTACTAACGGCAAAAGGGGGATTCCCTGATGGAACCATAATACCCTTGGAAATACTGTA
 641 TGGTTTTGTTTTGTTTTGTTGGTTTTTAAAGATTTTTGTTTGTTTATTGAATTCATTTCACTGTAGCTCTAAAATCTGCT
 721 TGTATTCCAAGCATATAAAATTTTCCCCCTTAGTGAATTAGTTTTAAAATGATATTGTTATATACATACTATGAAATATG
 801 TATAACTTTAACTTCTGTTTTACCAGCATACCCACACAAATAACAAGAATACTACTTATGAAATGTGCACTTTATCCTCA
 881 TTCCATAAATGTCGGTGCATACCTTATGTAAGGGAGCAGTTCAATAATCCATGAAAGAACTTAAGGCATTTGTTGGTTTA
 961 TCAGACTCGGAATCTATTTTCTCATTGCTCTGAATATGTCATCACTCTAGGTTTTACAGATTTATTCCTTTGTTACTTCT
1041 CTAATTCTTCCTTTGTAAAAAAAAAAAAAAGCAACACTTTTTATGTTATATGTTGTTCTTACAAACCATACTGAAAGAGT
1121 CCATTGTTTAAAAATCTTAATGTATCAAACTGTATAACTTGGCCGCTGTATGTCTTAAAACCTGCTTTTCAATGTGTTGA
1201 TACATTCCCAAGGTTACTTAATTCAACTTAACTATCATCTTATTCAGCACCAAGCATGTCCCAGGCACTGTACTAACCTA
1281 CAGAGATGCTAAGAGAAAAAAAAGACTTGTTTCTGATCTAATATCCCAGAAAAAGTAACTCATTGCTCTGTTAATAATCT
1361 CACATATACAAGTAGCTTCCCTCCCCTCTAGTTTTTTCTTCCTTTTCACTGCTGTTATATTTCATCATGATAATTCAGCA
1441 GGCCCAAGTAAAGGTTAAAAATAAGGTCTATGCCTAGGGAAACTCAGGGCTTCTAGTTTCTCTTAGAAAAGCTAAGAGAA
1521 GATAAGGTCTGAATAATAGCAGAAAAACCAACATCTACAAAACATTAAACTAGTGTTATACTTGATGATAACACTATTTG
1601 ATGAGTCTTAGAGTCCAGACACAAAGAGACAAAGCTTTGAAGATGCTTTTTGATCTACCTAGGTGGAGTTGGTGGTGCTG
1681 ATATTTAAATTCAGGCTACTGCTTCAATCTCAATTGCTTTGTAAGTGAAAAACATGACCCAGAGGACAGCACAGACTATG
1761 GCCATGGCTCACATGGTTTACATCCTTCACTGCTCACGTGTTTGCTGTCAAGCCATTTTTACATCTAAACTAAGATGTGC
1841 AGCATTTCACTTATTTAGATTCACTTAACAAACAAATTTTTCTGCTTTAAAAATGTCTTATTGTCCCAAGTGTACTATAG
1921 CGGCATATAGAGCTAGCTAATCTCTACAAACCCTCTGTAGGCCAGTAGTTCTCAAAGTGTGGTCTCTGGAAGAGCAGTAT
2001 CAGCATCATCTGGGAACTTGTCACAGATGCAGATTCTAGGGACCACTCCAGACCTACACAATCAGAAACTCTTGGGGGAG
2081 GGCCCGAAATATCTATGTTTTACCAAGCCCACCACATGATTCTGATGTACTCTAAATACTGAGAAAACCTGTTCTAGACA
2161 AATACCCAAGCAACAACTCCGCAGGCAGTTACCAAGTACGGCTGGCTACAACTGCTCCATCCGTGCCTCTTTTTAAAGTT
2241 CAAACTCACAGGTGACTCTAAGGTTATCTACTTTTACTCATAAGTAAAAGCCCTAGACTGGTGCTAATGTCAAACCACTG
2321 GCCTCCACTCAGGCCTCCATCTTCTCATGCCCTCTTACCAGTATTTAACTTCTGAGGAAGACAAGTGATGCTAAAACCTG
2401 AAATTCCAATGAAGCCATATGAACAGCTGTTCAGTTGCACTTCTAAGACTTTACTTAGCAGTAAATTATAGCTCATGTGC
2481 ATTATTTTCCAGATAACTTAGCTTATGAGTAGCTTATACAATTATGAAGATTTAATATTACAGATAAAATGTAAACTGTT
2561 TCTTTAAAATTGGGGCTTCAACTTTGGAATTTCACAGCGTGCTAAAATAACAGATTTCTCAGAAGTCTTTCAGCAAGATA
2641 AACATTATTAAGTAACTTATTTATGAAAGTATTAAAATGCTTACATTTGAACTTGATGGCTAACTTACAAAGATTCTCTA
2721 TGTATCAAATGTAACTTACTGCGACTAAACTTAATTTAATATTTACTCTATAACCAAATGAAATATATTTAAAATATATT
2801 GAATATTTTATATTGTTATATCCTGACAAGATTATAATATTTTAATGTACTAATATTTCTGTAATTATATCTAAAATATT
2881 ATTTTATTATATTGCCTAAGAATAAACATTTGTTAAATTGGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' accACGUUUUCAUUA-ACACCAAAAa 5'
             || |||  || | | ||||||| 
Target 5' cctTGGAAA--TACTGTATGGTTTTg 3'
 625 - 648 158.00 -5.74
2 
miRNA  3' accacguUUUCAUUAAC-ACCAAAaa 5'
                 ||:| | ||| ||||||  
Target 5' agaacttAAGGCATTTGTTGGTTTat 3'
 936 - 961 142.00 -8.20
3 
miRNA  3' accacguuuucauuAAC-ACCAAAAA------ 5'
                        ||| ||||||||      
Target 5' ggttttgttttgttTTGTTGGTTTTTAAAGAT 3'
 642 - 673 129.00 -8.36
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
334790 178 ClinVar
898021 262 ClinVar
334791 287 ClinVar
898022 288 ClinVar
334792 316 ClinVar
899136 388 ClinVar
334793 407 ClinVar
899137 455 ClinVar
899138 460 ClinVar
899139 502 ClinVar
334794 590 ClinVar
334795 596 ClinVar
334796 648 ClinVar
895018 657 ClinVar
334797 661 ClinVar
334798 812 ClinVar
334799 894 ClinVar
895019 970 ClinVar
334800 982 ClinVar
334801 1001 ClinVar
334802 1033 ClinVar
334803 1057 ClinVar
334804 1057 ClinVar
334805 1057 ClinVar
334806 1057 ClinVar
334807 1072 ClinVar
334808 1166 ClinVar
896460 1239 ClinVar
334809 1240 ClinVar
898079 1323 ClinVar
898080 1341 ClinVar
898081 1361 ClinVar
898082 1613 ClinVar
898083 1635 ClinVar
898084 1640 ClinVar
334810 1645 ClinVar
334811 1664 ClinVar
334812 1682 ClinVar
334813 1740 ClinVar
334814 1765 ClinVar
899205 1870 ClinVar
334815 1919 ClinVar
334816 2049 ClinVar
334817 2060 ClinVar
899206 2088 ClinVar
334818 2146 ClinVar
334819 2181 ClinVar
334820 2183 ClinVar
334821 2195 ClinVar
334822 2229 ClinVar
895089 2267 ClinVar
334823 2273 ClinVar
334824 2309 ClinVar
334825 2453 ClinVar
896532 2566 ClinVar
334826 2653 ClinVar
334827 2743 ClinVar
896533 2796 ClinVar
334828 2834 ClinVar
896534 2837 ClinVar
896535 2854 ClinVar
COSM5950049 26 COSMIC
COSM8575821 41 COSMIC
COSM8475862 56 COSMIC
COSN30464629 84 COSMIC
COSN30167889 103 COSMIC
COSN31575385 159 COSMIC
COSN30136375 173 COSMIC
COSN13975321 211 COSMIC
COSN30132825 245 COSMIC
COSN21921551 251 COSMIC
COSN20663808 306 COSMIC
COSN4910991 359 COSMIC
COSN32055528 503 COSMIC
COSN27691065 808 COSMIC
COSN31577426 942 COSMIC
COSN18720450 982 COSMIC
COSN29969281 1004 COSMIC
COSN20097911 1071 COSMIC
COSN31589894 1213 COSMIC
COSN31555123 1347 COSMIC
COSN9995499 1531 COSMIC
COSN31523857 1573 COSMIC
COSN31570111 1575 COSMIC
COSN31490034 1763 COSMIC
COSN31541599 1837 COSMIC
COSN31961799 2200 COSMIC
COSN31543275 2224 COSMIC
COSN5789728 2399 COSMIC
COSN31524307 2440 COSMIC
COSN32064212 2531 COSMIC
COSN21303850 2582 COSMIC
COSN31567827 2623 COSMIC
COSN28695124 2653 COSMIC
COSN8987506 2668 COSMIC
COSN31961800 2744 COSMIC
rs59257065 2743 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs758677838 2 dbSNP
rs1367729493 3 dbSNP
rs1224852612 5 dbSNP
rs758985028 5 dbSNP
rs778080065 14 dbSNP
rs1427475590 15 dbSNP
rs750968625 17 dbSNP
rs1422177264 24 dbSNP
rs1056425176 28 dbSNP
rs1484220678 35 dbSNP
rs1206325876 36 dbSNP
rs915750194 45 dbSNP
rs751973840 50 dbSNP
rs896080470 51 dbSNP
rs1393942161 54 dbSNP
rs370641364 60 dbSNP
rs1295033003 64 dbSNP
rs949684654 67 dbSNP
rs781576575 72 dbSNP
rs1381491061 75 dbSNP
rs1293340388 77 dbSNP
rs1320001305 78 dbSNP
rs1433798088 82 dbSNP
rs746367314 83 dbSNP
rs1218642606 91 dbSNP
rs1272005836 93 dbSNP
rs1332157359 95 dbSNP
rs542676292 103 dbSNP
rs1041406210 105 dbSNP
rs1246973381 108 dbSNP
rs200803393 109 dbSNP
rs1186365454 110 dbSNP
rs779537736 115 dbSNP
rs779675451 116 dbSNP
rs1192989594 119 dbSNP
rs1426013507 121 dbSNP
rs868756437 142 dbSNP
rs1235355552 144 dbSNP
rs1054037005 145 dbSNP
rs1287201895 172 dbSNP
rs902934379 173 dbSNP
rs999931939 174 dbSNP
rs892777157 175 dbSNP
rs139638980 178 dbSNP
rs1308269942 182 dbSNP
rs1395772973 193 dbSNP
rs1400547386 198 dbSNP
rs1174810930 204 dbSNP
rs1443878410 209 dbSNP
rs575194429 211 dbSNP
rs1049432549 213 dbSNP
rs1157110004 214 dbSNP
rs1473622137 227 dbSNP
rs1412889517 238 dbSNP
rs1187539628 244 dbSNP
rs542936106 252 dbSNP
rs1007406704 253 dbSNP
rs1009062663 258 dbSNP
rs1380923081 260 dbSNP
rs1019244359 262 dbSNP
rs1266919511 264 dbSNP
rs1156959149 265 dbSNP
rs965954894 270 dbSNP
rs1288539358 278 dbSNP
rs1243679044 279 dbSNP
rs976746420 283 dbSNP
rs6436677 287 dbSNP
rs573135458 288 dbSNP
rs376763557 289 dbSNP
rs984634522 293 dbSNP
rs773142477 294 dbSNP
rs1458850450 303 dbSNP
rs994125899 312 dbSNP
rs2070735 316 dbSNP
rs1452470713 325 dbSNP
rs559444827 335 dbSNP
rs115158745 336 dbSNP
rs1247301571 338 dbSNP
rs1206771593 355 dbSNP
rs551413560 361 dbSNP
rs1259677268 368 dbSNP
rs1208867027 372 dbSNP
rs971677230 388 dbSNP
rs1285608083 404 dbSNP
rs1245900702 405 dbSNP
rs981279889 406 dbSNP
rs759265728 407 dbSNP
rs934611087 417 dbSNP
rs781217495 435 dbSNP
rs1054278841 436 dbSNP
rs1460710032 439 dbSNP
rs374241146 440 dbSNP
rs1440419864 442 dbSNP
rs1239920522 450 dbSNP
rs1393069955 451 dbSNP
rs1425011498 452 dbSNP
rs1041353391 460 dbSNP
rs902881930 466 dbSNP
rs914244201 470 dbSNP
rs935700293 471 dbSNP
rs1054585796 472 dbSNP
rs932288121 473 dbSNP
rs865808769 475 dbSNP
rs1363327124 479 dbSNP
rs1466697450 482 dbSNP
rs748284892 488 dbSNP
rs1197481468 489 dbSNP
rs563274656 492 dbSNP
rs1210086779 502 dbSNP
rs1341870200 503 dbSNP
rs1018818940 510 dbSNP
rs1404275014 513 dbSNP
rs1366630494 516 dbSNP
rs1274785882 523 dbSNP
rs901752257 530 dbSNP
rs1040558608 538 dbSNP
rs1469603279 542 dbSNP
rs1324432685 545 dbSNP
rs993442185 546 dbSNP
rs1369715384 551 dbSNP
rs112338364 553 dbSNP
rs1431414308 561 dbSNP
rs951335416 576 dbSNP
rs1171959367 577 dbSNP
rs1376132874 582 dbSNP
rs993751561 587 dbSNP
rs55698424 590 dbSNP
rs1331194930 591 dbSNP
rs567547831 592 dbSNP
rs56123646 596 dbSNP
rs992062165 598 dbSNP
rs1322463888 599 dbSNP
rs530456924 609 dbSNP
rs866973841 614 dbSNP
rs546470961 618 dbSNP
rs977620819 623 dbSNP
rs1409429509 624 dbSNP
rs1348797077 627 dbSNP
rs1310090746 632 dbSNP
rs971493748 635 dbSNP
rs981905560 643 dbSNP
rs1412726683 648 dbSNP
rs183552783 648 dbSNP
rs935632419 654 dbSNP
rs538761832 657 dbSNP
rs557009121 661 dbSNP
rs1201759918 663 dbSNP
rs1471984097 674 dbSNP
rs1427439280 675 dbSNP
rs575252742 679 dbSNP
rs1183935266 694 dbSNP
rs1481153799 695 dbSNP
rs1237310246 701 dbSNP
rs1208639810 702 dbSNP
rs550617852 714 dbSNP
rs1480258022 716 dbSNP
rs1171788984 722 dbSNP
rs1227791162 726 dbSNP
rs777394285 728 dbSNP
rs1290395995 729 dbSNP
rs1229295517 734 dbSNP
rs910290777 739 dbSNP
rs1460866059 751 dbSNP
rs753239650 754 dbSNP
rs1445714116 759 dbSNP
rs1360764750 762 dbSNP
rs943166912 771 dbSNP
rs1337312774 774 dbSNP
rs1392169235 775 dbSNP
rs1456209614 778 dbSNP
rs536230948 779 dbSNP
rs1040217172 784 dbSNP
rs1385828115 787 dbSNP
rs757002799 793 dbSNP
rs778647101 801 dbSNP
rs778641986 803 dbSNP
rs993347333 805 dbSNP
rs914484355 809 dbSNP
rs116568659 812 dbSNP
rs985076570 813 dbSNP
rs912183740 814 dbSNP
rs1208677305 818 dbSNP
rs573453597 824 dbSNP
rs1463583994 828 dbSNP
rs1270137908 836 dbSNP
rs943818432 838 dbSNP
rs1321410163 845 dbSNP
rs1037148530 848 dbSNP
rs1297387828 850 dbSNP
rs769209706 853 dbSNP
rs1315583537 854 dbSNP
rs1434335950 855 dbSNP
rs373883262 856 dbSNP
rs1203651239 857 dbSNP
rs376204548 859 dbSNP
rs929451859 860 dbSNP
rs1453874686 877 dbSNP
rs1348871442 884 dbSNP
rs7587228 894 dbSNP
rs888012095 895 dbSNP
rs1224782327 896 dbSNP
rs1448271064 904 dbSNP
rs750472344 908 dbSNP
rs1187123522 920 dbSNP
rs1266907421 926 dbSNP
rs1263858285 930 dbSNP
rs1012951390 934 dbSNP
rs1490233821 942 dbSNP
rs1194673105 950 dbSNP
rs959032861 952 dbSNP
rs553724795 965 dbSNP
rs1024364118 968 dbSNP
rs771713125 969 dbSNP
rs188150740 970 dbSNP
rs868085117 971 dbSNP
rs372910422 973 dbSNP
rs1362877631 981 dbSNP
rs1134745 982 dbSNP
rs1382259846 987 dbSNP
rs957684432 989 dbSNP
rs1291411127 991 dbSNP
rs990214773 998 dbSNP
rs770149608 1001 dbSNP
rs943093543 1021 dbSNP
rs377487079 1028 dbSNP
rs1300695726 1029 dbSNP
rs773370259 1030 dbSNP
rs886055744 1033 dbSNP
rs1364431969 1042 dbSNP
rs1400169927 1054 dbSNP
rs1432613554 1056 dbSNP
rs11297279 1057 dbSNP
rs1228130469 1057 dbSNP
rs1491018982 1057 dbSNP
rs367667701 1057 dbSNP
rs59670450 1057 dbSNP
rs869235967 1057 dbSNP
rs879022494 1057 dbSNP
rs886055745 1057 dbSNP
rs886055746 1057 dbSNP
rs955908865 1057 dbSNP
rs923027815 1058 dbSNP
rs1298640480 1060 dbSNP
rs989921257 1062 dbSNP
rs1345684275 1066 dbSNP
rs866036167 1072 dbSNP
rs1047595219 1073 dbSNP
rs1372816818 1073 dbSNP
rs1299219207 1077 dbSNP
rs887686123 1082 dbSNP
rs1006168936 1084 dbSNP
rs1178258111 1087 dbSNP
rs1480809508 1089 dbSNP
rs1038759632 1090 dbSNP
rs953975076 1092 dbSNP
rs1180319559 1100 dbSNP
rs985755795 1106 dbSNP
rs1252457203 1112 dbSNP
rs894454785 1118 dbSNP
rs1482917633 1125 dbSNP
rs912231300 1134 dbSNP
rs1224741475 1137 dbSNP
rs1323662929 1142 dbSNP
rs1243713182 1147 dbSNP
rs1289616803 1151 dbSNP
rs544795469 1155 dbSNP
rs943667611 1165 dbSNP
rs28554165 1166 dbSNP
rs1244048684 1180 dbSNP
rs771150819 1194 dbSNP
rs1186258741 1196 dbSNP
rs929484477 1198 dbSNP
rs1049246406 1205 dbSNP
rs1388062659 1206 dbSNP
rs1257335516 1210 dbSNP
rs774610552 1212 dbSNP
rs530552346 1214 dbSNP
rs1162237678 1225 dbSNP
rs1473734937 1229 dbSNP
rs776439710 1232 dbSNP
rs948968740 1233 dbSNP
rs998976131 1236 dbSNP
rs1423033002 1239 dbSNP
rs10188531 1240 dbSNP
rs957842915 1243 dbSNP
rs538820746 1252 dbSNP
rs537327785 1255 dbSNP
rs192736312 1275 dbSNP
rs1018291045 1279 dbSNP
rs1031797270 1289 dbSNP
rs764837588 1296 dbSNP
rs964379399 1296 dbSNP
rs1011585215 1299 dbSNP
rs1244473807 1307 dbSNP
rs115338903 1323 dbSNP
rs922974019 1335 dbSNP
rs929078167 1341 dbSNP
rs1454021484 1344 dbSNP
rs1364545206 1346 dbSNP
rs983272948 1347 dbSNP
rs953839935 1348 dbSNP
rs1006815985 1352 dbSNP
rs116377856 1361 dbSNP
rs1457175758 1366 dbSNP
rs941877703 1369 dbSNP
rs1055024579 1370 dbSNP
rs1185309925 1387 dbSNP
rs895064188 1390 dbSNP
rs1445233227 1392 dbSNP
rs972792034 1398 dbSNP
rs775128622 1410 dbSNP
rs1354399076 1414 dbSNP
rs1448261341 1424 dbSNP
rs867675210 1438 dbSNP
rs571375606 1442 dbSNP
rs1261942479 1444 dbSNP
rs748783174 1450 dbSNP
rs1294493342 1451 dbSNP
rs907289653 1461 dbSNP
rs998923754 1466 dbSNP
rs1341999638 1474 dbSNP
rs909383099 1476 dbSNP
rs1032238055 1480 dbSNP
rs893280218 1484 dbSNP
rs1327125408 1489 dbSNP
rs1286475912 1499 dbSNP
rs1315307781 1528 dbSNP
rs1385347860 1535 dbSNP
rs1012170300 1538 dbSNP
rs1264081718 1554 dbSNP
rs1425073819 1556 dbSNP
rs532299627 1560 dbSNP
rs964958404 1576 dbSNP
rs1166113570 1583 dbSNP
rs1462939032 1583 dbSNP
rs948833823 1584 dbSNP
rs375140456 1595 dbSNP
rs763565882 1598 dbSNP
rs146618142 1606 dbSNP
rs1449574319 1607 dbSNP
rs760687020 1613 dbSNP
rs1223597095 1619 dbSNP
rs568988153 1629 dbSNP
rs376587950 1635 dbSNP
rs536293320 1639 dbSNP
rs950432432 1640 dbSNP
rs1243054960 1643 dbSNP
rs886055747 1645 dbSNP
rs1053540409 1647 dbSNP
rs1178392573 1651 dbSNP
rs1405194847 1658 dbSNP
rs1347554944 1659 dbSNP
rs56030607 1664 dbSNP
rs566816490 1670 dbSNP
rs537716161 1676 dbSNP
rs534227261 1677 dbSNP
rs1043087590 1678 dbSNP
rs1468027843 1681 dbSNP
rs78758928 1682 dbSNP
rs1171426769 1688 dbSNP
rs1007132439 1694 dbSNP
rs764834745 1696 dbSNP
rs1019551357 1697 dbSNP
rs991064995 1711 dbSNP
rs1199720166 1716 dbSNP
rs1472453772 1722 dbSNP
rs1231568016 1733 dbSNP
rs1207239451 1739 dbSNP
rs750139996 1740 dbSNP
rs965661009 1746 dbSNP
rs994071501 1750 dbSNP
rs1325786964 1753 dbSNP
rs577379452 1765 dbSNP
rs758099711 1769 dbSNP
rs544801975 1773 dbSNP
rs1349652324 1778 dbSNP
rs781636655 1783 dbSNP
rs1284158329 1794 dbSNP
rs1444130724 1796 dbSNP
rs556950106 1798 dbSNP
rs867426231 1799 dbSNP
rs1407717038 1806 dbSNP
rs1176662595 1809 dbSNP
rs575404282 1810 dbSNP
rs907235866 1826 dbSNP
rs1472098607 1829 dbSNP
rs1406222534 1831 dbSNP
rs934678480 1842 dbSNP
rs970293877 1851 dbSNP
rs980661432 1863 dbSNP
rs542706397 1865 dbSNP
rs77842807 1870 dbSNP
rs1230612807 1877 dbSNP
rs1011705015 1879 dbSNP
rs1469181884 1896 dbSNP
rs183643327 1902 dbSNP
rs913241743 1909 dbSNP
rs947380793 1913 dbSNP
rs1315297077 1917 dbSNP
rs767668198 1919 dbSNP
rs900746282 1922 dbSNP
rs540173663 1923 dbSNP
rs1283500752 1926 dbSNP
rs1450404332 1927 dbSNP
rs889849737 1931 dbSNP
rs1336884185 1935 dbSNP
rs1456260854 1944 dbSNP
rs1343003948 1951 dbSNP
rs1160870691 1958 dbSNP
rs1006753809 1961 dbSNP
rs778080645 1974 dbSNP
rs900982258 1975 dbSNP
rs1175390557 1977 dbSNP
rs565171914 1978 dbSNP
rs1447043569 1984 dbSNP
rs1244312022 1988 dbSNP
rs994495016 1996 dbSNP
rs565211872 2010 dbSNP
rs1244008956 2012 dbSNP
rs1216833640 2014 dbSNP
rs1317256093 2015 dbSNP
rs1004965736 2016 dbSNP
rs1005221823 2019 dbSNP
rs186807468 2021 dbSNP
rs1315648970 2035 dbSNP
rs1326775260 2036 dbSNP
rs1433659013 2041 dbSNP
rs1359318313 2043 dbSNP
rs1453795819 2047 dbSNP
rs886055748 2049 dbSNP
rs1290238188 2051 dbSNP
rs4290648 2060 dbSNP
rs1161999604 2062 dbSNP
rs1441545910 2075 dbSNP
rs1386362737 2076 dbSNP
rs990661922 2086 dbSNP
rs550358196 2087 dbSNP
rs981859181 2094 dbSNP
rs536348676 2095 dbSNP
rs970599610 2096 dbSNP
rs1488311483 2116 dbSNP
rs1340505611 2117 dbSNP
rs1219891529 2119 dbSNP
rs960200183 2121 dbSNP
rs1292383001 2127 dbSNP
rs989055700 2128 dbSNP
rs981969801 2129 dbSNP
rs1305254113 2137 dbSNP
rs115394347 2146 dbSNP
rs191611754 2150 dbSNP
rs1053530011 2153 dbSNP
rs746140743 2155 dbSNP
rs1344408525 2171 dbSNP
rs978719413 2178 dbSNP
rs886055749 2181 dbSNP
rs114535536 2183 dbSNP
rs1039186754 2188 dbSNP
rs7567291 2195 dbSNP
rs997700364 2200 dbSNP
rs1198251579 2214 dbSNP
rs756106092 2220 dbSNP
rs760322189 2223 dbSNP
rs534159972 2224 dbSNP
rs764106574 2227 dbSNP
rs776491147 2228 dbSNP
rs367785196 2229 dbSNP
rs1166000190 2233 dbSNP
rs963148277 2239 dbSNP
rs374553916 2241 dbSNP
rs1479584969 2250 dbSNP
rs1418676447 2253 dbSNP
rs1204562855 2263 dbSNP
rs888348245 2266 dbSNP
rs886055750 2273 dbSNP
rs1280945380 2278 dbSNP
rs1225006720 2281 dbSNP
rs1012432171 2285 dbSNP
rs1023357910 2295 dbSNP
rs764889706 2296 dbSNP
rs1390041305 2300 dbSNP
rs1399179162 2301 dbSNP
rs1403264781 2308 dbSNP
rs886055751 2309 dbSNP
rs1465564479 2321 dbSNP
rs749902632 2328 dbSNP
rs981917571 2335 dbSNP
rs1327310783 2342 dbSNP
rs923818536 2349 dbSNP
rs1470459071 2351 dbSNP
rs1411525821 2354 dbSNP
rs571123759 2359 dbSNP
rs904816349 2381 dbSNP
rs1417118315 2383 dbSNP
rs1252520473 2390 dbSNP
rs1177763109 2391 dbSNP
rs1268831187 2393 dbSNP
rs956873129 2400 dbSNP
rs1260775660 2407 dbSNP
rs1339255718 2409 dbSNP
rs1003710233 2410 dbSNP
rs1034766097 2414 dbSNP
rs1237284696 2415 dbSNP
rs538483249 2420 dbSNP
rs1293246015 2421 dbSNP
rs960523545 2428 dbSNP
rs149217054 2435 dbSNP
rs1221178629 2436 dbSNP
rs1452636134 2443 dbSNP
rs1380662851 2445 dbSNP
rs1338717247 2447 dbSNP
rs1453480456 2450 dbSNP
rs1384481655 2451 dbSNP
rs4470338 2453 dbSNP
rs1451333641 2459 dbSNP
rs184887995 2470 dbSNP
rs190533664 2475 dbSNP
rs765877735 2477 dbSNP
rs1159737726 2495 dbSNP
rs1241329577 2497 dbSNP
rs947430487 2510 dbSNP
rs1184830276 2513 dbSNP
rs1039502419 2518 dbSNP
rs968955046 2520 dbSNP
rs1260546111 2526 dbSNP
rs771772105 2537 dbSNP
rs1203059352 2552 dbSNP
rs922022057 2553 dbSNP
rs1261742464 2566 dbSNP
rs1445107612 2577 dbSNP
rs1165399989 2582 dbSNP
rs933437589 2599 dbSNP
rs572785774 2600 dbSNP
rs1453411247 2602 dbSNP
rs1325981720 2609 dbSNP
rs1316458433 2613 dbSNP
rs1384199198 2615 dbSNP
rs911216577 2626 dbSNP
rs1162796210 2631 dbSNP
rs1298517151 2640 dbSNP
rs1385910522 2645 dbSNP
rs1384169776 2646 dbSNP
rs942683060 2647 dbSNP
rs1165419605 2649 dbSNP
rs545700772 2649 dbSNP
rs1316614647 2650 dbSNP
rs57817160 2653 dbSNP
rs1448316190 2654 dbSNP
rs1261999205 2657 dbSNP
rs565080084 2675 dbSNP
rs1222163568 2684 dbSNP
rs576716220 2687 dbSNP
rs1294564791 2690 dbSNP
rs1247402685 2711 dbSNP
rs1338818294 2712 dbSNP
rs1037353588 2716 dbSNP
rs898802408 2721 dbSNP
rs1046920267 2722 dbSNP
rs1381294506 2723 dbSNP
rs544059746 2728 dbSNP
rs1363535139 2736 dbSNP
rs113938533 2742 dbSNP
rs59257065 2743 dbSNP
rs1395703588 2748 dbSNP
rs1165585745 2751 dbSNP
rs1044952977 2754 dbSNP
rs1423836232 2760 dbSNP
rs1198304927 2769 dbSNP
rs904889606 2775 dbSNP
rs1003207322 2780 dbSNP
rs1389868997 2785 dbSNP
rs779705298 2792 dbSNP
rs906294246 2796 dbSNP
rs1009242965 2800 dbSNP
rs1203020911 2803 dbSNP
rs1283216322 2810 dbSNP
rs1461600322 2811 dbSNP
rs1003326473 2813 dbSNP
rs1343407166 2813 dbSNP
rs1020428745 2815 dbSNP
rs1335056629 2831 dbSNP
rs1436938201 2831 dbSNP
rs968819267 2833 dbSNP
rs137947510 2834 dbSNP
rs886055752 2834 dbSNP
rs1030825188 2837 dbSNP
rs1430989656 2841 dbSNP
rs1192069466 2847 dbSNP
rs1469972556 2848 dbSNP
rs768580153 2854 dbSNP
rs989782736 2857 dbSNP
rs1458245414 2879 dbSNP
rs1186885212 2883 dbSNP
rs964433363 2885 dbSNP
rs1022226537 2893 dbSNP
rs969092358 2897 dbSNP
rs922709090 2904 dbSNP
rs951458306 2908 dbSNP
rs1349753565 2909 dbSNP
rs1277672006 2911 dbSNP
rs974746675 2919 dbSNP
rs1455486236 2923 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 1285.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' accacguuuucauuAAC-ACCAAAAa 5'
                        ||| ||||||| 
Target 5' ------guuuuguuUUGUUGGUUUUu 3'
 		1 - 20
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000396578.3 | 3UTR | GUUUUGUUUUGUUGGUUUUUAAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
168 hsa-miR-548t-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059365 ANP32E acidic nuclear phosphoprotein 32 family member E 2 2
MIRT072839 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 2 6
MIRT076945 PCGF2 polycomb group ring finger 2 2 6
MIRT083941 TFAP2C transcription factor AP-2 gamma 2 2
MIRT085401 ETS2 ETS proto-oncogene 2, transcription factor 2 2
MIRT109790 KLHL15 kelch like family member 15 2 2
MIRT114046 AKAP11 A-kinase anchoring protein 11 2 10
MIRT130165 TXNIP thioredoxin interacting protein 2 6
MIRT150013 MIDN midnolin 2 2
MIRT181258 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT205594 NCL nucleolin 2 2
MIRT222253 ACTB actin beta 2 4
MIRT245653 EIF5AL1 eukaryotic translation initiation factor 5A-like 1 2 4
MIRT250947 CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 2 4
MIRT252497 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT271990 ARF1 ADP ribosylation factor 1 2 4
MIRT280804 RNF11 ring finger protein 11 2 2
MIRT293803 FEM1A fem-1 homolog A 2 2
MIRT318231 RREB1 ras responsive element binding protein 1 2 2
MIRT341455 ATP6V0B ATPase H+ transporting V0 subunit b 2 2
MIRT347413 CEBPG CCAAT/enhancer binding protein gamma 2 4
MIRT351860 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT357983 GRPEL2 GrpE like 2, mitochondrial 2 2
MIRT377094 PPP1CB protein phosphatase 1 catalytic subunit beta 2 2
MIRT407303 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT441564 LMOD3 leiomodin 3 2 2
MIRT442364 ZC3H12C zinc finger CCCH-type containing 12C 2 2
MIRT443228 ARL5B ADP ribosylation factor like GTPase 5B 2 2
MIRT443404 HMX3 H6 family homeobox 3 2 2
MIRT446055 NR5A2 nuclear receptor subfamily 5 group A member 2 2 2
MIRT448277 ZNF652 zinc finger protein 652 2 2
MIRT450822 KCNB1 potassium voltage-gated channel subfamily B member 1 2 2
MIRT453016 CCDC115 coiled-coil domain containing 115 2 17
MIRT454463 PPP2R2B protein phosphatase 2 regulatory subunit Bbeta 2 2
MIRT456360 CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 2 2
MIRT460007 DNALI1 dynein axonemal light intermediate chain 1 2 2
MIRT463154 ZNF385A zinc finger protein 385A 2 6
MIRT463766 YPEL2 yippee like 2 2 2
MIRT468310 SFT2D2 SFT2 domain containing 2 2 2
MIRT470668 POLR2D RNA polymerase II subunit D 2 4
MIRT478517 CTTN cortactin 2 2
MIRT480507 C11orf57 chromosome 11 open reading frame 57 2 2
MIRT484718 INHBA inhibin beta A subunit 2 12
MIRT485494 HMGN2 high mobility group nucleosomal binding domain 2 2 2
MIRT487302 SLC38A9 solute carrier family 38 member 9 2 2
MIRT487771 ANKEF1 ankyrin repeat and EF-hand domain containing 1 2 16
MIRT491876 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT494304 CEP120 centrosomal protein 120 2 2
MIRT495396 TRIM24 tripartite motif containing 24 2 2
MIRT495646 CDK1 cyclin dependent kinase 1 2 2
MIRT496665 TMEM237 transmembrane protein 237 2 2
MIRT496837 ZNF460 zinc finger protein 460 2 2
MIRT498638 CHD4 chromodomain helicase DNA binding protein 4 2 10
MIRT503928 FBXL13 F-box and leucine rich repeat protein 13 2 4
MIRT506063 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT506582 MIER3 MIER family member 3 2 4
MIRT506606 MAT2A methionine adenosyltransferase 2A 2 4
MIRT506844 KIF23 kinesin family member 23 2 6
MIRT508536 RPP14 ribonuclease P/MRP subunit p14 2 4
MIRT509669 ZNF354B zinc finger protein 354B 2 10
MIRT511170 MBNL3 muscleblind like splicing regulator 3 2 6
MIRT512147 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT512831 ID4 inhibitor of DNA binding 4, HLH protein 2 6
MIRT514558 XRCC3 X-ray repair cross complementing 3 2 4
MIRT515856 AJAP1 adherens junctions associated protein 1 2 4
MIRT521848 PNISR PNN interacting serine and arginine rich protein 2 4
MIRT525364 SYNM synemin 2 2
MIRT527120 ARHGAP15 Rho GTPase activating protein 15 2 2
MIRT527271 FBLN2 fibulin 2 2 2
MIRT527439 COL4A3 collagen type IV alpha 3 chain 2 2
MIRT527658 CD300E CD300e molecule 2 2
MIRT528334 TBC1D22B TBC1 domain family member 22B 2 2
MIRT529033 EXOC8 exocyst complex component 8 2 2
MIRT529321 PDE5A phosphodiesterase 5A 2 2
MIRT529677 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT529846 SMTN smoothelin 2 2
MIRT530385 ZNF431 zinc finger protein 431 2 2
MIRT530913 GPR85 G protein-coupled receptor 85 2 2
MIRT531794 KDR kinase insert domain receptor 2 2
MIRT532246 KLF2 Kruppel like factor 2 2 4
MIRT532658 CBX7 chromobox 7 2 2
MIRT533630 TMX3 thioredoxin related transmembrane protein 3 2 2
MIRT534811 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT534975 PSD3 pleckstrin and Sec7 domain containing 3 2 2
MIRT536588 ITPKB inositol-trisphosphate 3-kinase B 2 2
MIRT536779 HNRNPD heterogeneous nuclear ribonucleoprotein D 2 2
MIRT538764 CABLES1 Cdk5 and Abl enzyme substrate 1 2 2
MIRT539294 ANGEL2 angel homolog 2 2 2
MIRT539621 SHISA9 shisa family member 9 2 2
MIRT539651 BUB1 BUB1 mitotic checkpoint serine/threonine kinase 2 2
MIRT540347 OPHN1 oligophrenin 1 2 2
MIRT540413 PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 2 2
MIRT541396 CDC27 cell division cycle 27 2 2
MIRT542916 HSBP1 heat shock factor binding protein 1 2 2
MIRT544710 EIF5A eukaryotic translation initiation factor 5A 2 4
MIRT544998 MFF mitochondrial fission factor 2 4
MIRT553289 TSPAN3 tetraspanin 3 2 2
MIRT553455 TNRC6C trinucleotide repeat containing 6C 2 2
MIRT553782 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT554656 ROBO1 roundabout guidance receptor 1 2 2
MIRT555104 PURB purine rich element binding protein B 2 2
MIRT557235 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT560861 GAL3ST3 galactose-3-O-sulfotransferase 3 2 2
MIRT561545 SON SON DNA binding protein 2 2
MIRT561554 SLMO2 PRELI domain containing 3B 2 2
MIRT563764 ZNF678 zinc finger protein 678 2 2
MIRT565653 SIX4 SIX homeobox 4 2 2
MIRT568080 CELF2 CUGBP Elav-like family member 2 2 2
MIRT568759 MYBL1 MYB proto-oncogene like 1 2 2
MIRT569078 CADM2 cell adhesion molecule 2 2 2
MIRT569509 THYN1 thymocyte nuclear protein 1 2 2
MIRT571268 CDKN2AIP CDKN2A interacting protein 2 2
MIRT571809 PHF19 PHD finger protein 19 2 2
MIRT572554 DKK3 dickkopf WNT signaling pathway inhibitor 3 2 2
MIRT573782 SLC24A4 solute carrier family 24 member 4 2 4
MIRT576441 Ccdc115 coiled-coil domain containing 115 2 10
MIRT576712 Slc30a3 solute carrier family 30 (zinc transporter), member 3 2 3
MIRT608377 PIWIL2 piwi like RNA-mediated gene silencing 2 2 2
MIRT608484 NKTR natural killer cell triggering receptor 2 6
MIRT610186 FAM49A family with sequence similarity 49 member A 2 2
MIRT611631 EDIL3 EGF like repeats and discoidin domains 3 2 2
MIRT613534 TRA2B transformer 2 beta homolog 2 2
MIRT616221 PTPN11 protein tyrosine phosphatase, non-receptor type 11 2 2
MIRT622370 SALL1 spalt like transcription factor 1 2 2
MIRT624371 CDK12 cyclin dependent kinase 12 2 2
MIRT624995 ZNF665 zinc finger protein 665 2 4
MIRT626875 AP3B1 adaptor related protein complex 3 beta 1 subunit 2 2
MIRT627737 RAP2B RAP2B, member of RAS oncogene family 2 4
MIRT628490 ADAT2 adenosine deaminase, tRNA specific 2 2 2
MIRT633647 PLEKHG7 pleckstrin homology and RhoGEF domain containing G7 2 4
MIRT634028 SLC30A3 solute carrier family 30 member 3 2 3
MIRT635923 GLTSCR2 NOP53 ribosome biogenesis factor 2 2
MIRT638287 SERBP1 SERPINE1 mRNA binding protein 1 2 2
MIRT641959 RNF115 ring finger protein 115 2 2
MIRT643573 CTNNA3 catenin alpha 3 2 2
MIRT645180 NOL9 nucleolar protein 9 2 4
MIRT647497 ZNF639 zinc finger protein 639 2 2
MIRT647682 PCK1 phosphoenolpyruvate carboxykinase 1 2 2
MIRT648422 MYOZ3 myozenin 3 2 2
MIRT650113 ZCCHC9 zinc finger CCHC-type containing 9 2 2
MIRT651076 ZNF518B zinc finger protein 518B 2 4
MIRT651415 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT651456 XKR4 XK related 4 2 2
MIRT653619 SLC30A4 solute carrier family 30 member 4 2 2
MIRT653637 SLC30A1 solute carrier family 30 member 1 2 2
MIRT654896 POU2F1 POU class 2 homeobox 1 2 2
MIRT656483 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT658016 GABRA4 gamma-aminobutyric acid type A receptor alpha4 subunit 2 2
MIRT658041 FZD10 frizzled class receptor 10 2 2
MIRT660093 BTBD3 BTB domain containing 3 2 2
MIRT663923 MAGEF1 MAGE family member F1 2 2
MIRT665882 TGIF2 TGFB induced factor homeobox 2 2 2
MIRT669051 CEP128 centrosomal protein 128 2 2
MIRT669711 AAGAB alpha and gamma adaptin binding protein 2 2
MIRT686812 SNX2 sorting nexin 2 2 4
MIRT689883 SOD2 superoxide dismutase 2 2 2
MIRT693274 GLRX2 glutaredoxin 2 2 4
MIRT697056 BCAR1 BCAR1, Cas family scaffolding protein 2 2
MIRT703297 GID4 GID complex subunit 4 homolog 2 2
MIRT704087 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT707719 CDC6 cell division cycle 6 2 2
MIRT708136 GK5 glycerol kinase 5 (putative) 2 2
MIRT709212 KLHL30 kelch like family member 30 2 2
MIRT710062 RWDD2A RWD domain containing 2A 2 2
MIRT712770 POU6F2 POU class 6 homeobox 2 2 2
MIRT715073 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT715387 TADA3 transcriptional adaptor 3 2 2
MIRT717712 NCKAP1 NCK associated protein 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-548t Paclitaxel 36314 NSC125973 approved sensitive cell line (W1)
hsa-mir-548t Cisplatin 5460033 NSC119875 approved sensitive cell line (W1)
hsa-mir-548t Doxorubicin 31703 NSC123127 approved sensitive cell line (W1)
hsa-mir-548t Topotecan 60699 NSC609699 approved sensitive cell line (W1)
hsa-mir-548t Vincristine 5978 approved sensitive cell line (W1)
hsa-miR-548t-3p Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (SW480, HCT-116)
hsa-miR-548t-3p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-548t-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)

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