Gene Symbol |
B3GALT5
|
Synonyms |
B3GalT-V, B3GalTx, B3T5, GLCT5, beta-1,3-GalTase 5, beta-3-Gx-T5, beta3Gal-T5 |
Description |
beta-1,3-galactosyltransferase 5 |
Transcript |
NM_006057
|
Other Transcripts |
NM_033170
,
NM_033171
,
NM_033172
|
Expression |
|
Putative miRNA Targets on B3GALT5 |
|
3'UTR of B3GALT5 (miRNA target sites are highlighted) |
>B3GALT5|NM_006057|3'UTR
1 GGGGAGCCCAGAGGCACATCCGGACAAGTTTCAGATAACCCGTGGGGATAGTTTTTGCTAGATTTTGGAAGAGGGGGCGG
81 GACAGAGGATGCTGTTCTTCAGTGCTGAAATCCACGCCAGAATGTCGGTGTTCATGAAGTCACTGATTAGTTCCCACTTG
161 GTGCCCCAGGCAATAATAGGCCCGTCTCTTGGGCACGCACACTCTTCATACTAAGTGTTTGACATACACCTGGATTTTTG
241 CATTTCAGGGGTCAGTATCCTATGACATGATGGGTGTTACCATCCTAATTTTACAGGCAAGGACACAGCAGCTGCGAGAG
321 GTACAGAAACTTGTCCCAAGGCTCACAGCCAGTAGGCATAGGAGCGGGAATGAAAATCGAGCACTGTCAGAATCTGGTGG
401 GCAGCCCCTGACTTGAACCACTCCCACGTGCTGCCTCCCTTAGGAGGGGACACTGATGATGAGGTCTCGGAGCCGGCATC
481 CTTCCATCCCTGTCGAGTCCCCTCCACCTCAGCTCCCAGTCCTTGTGCTTTTTGGAGCTAAGCCTGGGATGACCAAATTC
561 ACCCCAGCTCCTTCATTCACAGGGCTGGATGTAGCTGGGATTGAGTCCATGTTATCGGCTCGGTACTCAACACAACCCAA
641 GTTTCATCCGAGGAAATGTCCCCGCAGTGGATGCAGCTCACATGCTGAGGAACACCCAGCTCTGGACAGAGTTCTTATAA
721 ATGTATAAATTAGGCTCAGAAACCACTGCATTCTGACCTGCTGTACAGACTGCCCACACTGCTGACCTGCCTAGCGAGCA
801 GGACATCCCTTCTGAGCCATCTGCTGCTCTCTCATTTCATCACCCCAACTGTCCCTTGTTTTTGATCAATGGGGACCAGC
881 CACTGCCCCAGGAGCACTTTAGGGCTCTCAGTTCAAACTGAAGGACAGTTGAACTCAGATGGGGTTCATGTGGGATTCTG
961 GGAGCTTTCTGGGAATTCAGTTGGAGTCAAGTCAGGATGCTCTCAAGGACCCCTCGGGCTCAGAGCCCTAAAGTGGGCCC
1041 TGGTGAAGCAGGGTGGTCCTGCGTCCACTTCCCAAGCCTGAGCCAAGCTCATCTTCATTGAATGTCTCATTTGGCCGAGG
1121 AACAACTGAACTTTGTGGTTTGCTGTTTAGCCTTCAGTTTGCTCCGCTGCCTCCTACCCAGAGGTTTGTGCGAGCCTGTG
1201 TTGCAGGGTTGTATAAAACCAAGGTACTTCGTTAGTTTTGCCCATTCAGCCATGGTCACGTGACATGCAAAGTAATCTTG
1281 CTCCTAATTATAGAAATGATTTTTCTTTTAATTTTTTACTTTACCAGACTTTACTTTGTACTCAGAGAAGAGGCCTCACA
1361 TGGCTGTGTCACATATAAATGTTGGACTAAACTCTTAAAAAAAAAAAAAAAAA
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' agGUA-GUCCUCAGUACCUUCGa 5'
||| ::||| || |||:|||
Target 5' ttCATGTGGGATTC-TGGGAGCt 3'
|
945 - 966
|
147.00 |
-16.90 |
2
|
miRNA 3' agguAGUCCUC-AGUACCUUCga 5'
|:: || |: ||||||
Target 5' gtttTTGCTAGATTTTGGAAGag 3'
|
51 - 73
|
126.00 |
-7.60 |
3
|
miRNA 3' agGUAG--UCCU---CAG------UACCUUCGa 5'
|||| |||| ||| :|||| ||
Target 5' ttCATCCGAGGAAATGTCCCCGCAGTGGATGCa 3'
|
643 - 675
|
124.00 |
-13.50 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|