pre-miRNA Information
pre-miRNA hsa-mir-4477a   
Genomic Coordinates chr9: 41233755 - 41233835
Description Homo sapiens miR-4477a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4477a
Sequence 48| CUAUUAAGGACAUUUGUGAUUC |69
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1281813060 1 dbSNP
rs1352899679 1 dbSNP
rs1283566158 2 dbSNP
rs1236244724 4 dbSNP
rs75019967 4 dbSNP
rs1348124293 5 dbSNP
rs34026740 8 dbSNP
rs1288237115 9 dbSNP
rs71262206 10 dbSNP
rs1355759977 11 dbSNP
rs1300249508 16 dbSNP
rs1328879592 18 dbSNP
rs139133717 20 dbSNP
Putative Targets

Gene Information
Gene Symbol FEZ2   
Synonyms HUM3CL
Description fasciculation and elongation protein zeta 2
Transcript NM_005102   
Other Transcripts NM_001042548   
Expression
Putative miRNA Targets on FEZ2
3'UTR of FEZ2
(miRNA target sites are highlighted)
>FEZ2|NM_005102|3'UTR
   1 AGCAGCAACTTTATCTGCGGTGGGCTCCAAGCTAGATTTCCGACAGCATTATTCTGAGAGCTGGCTACCATTACCCTTCT
  81 TGCTATTGGAAACTCAGCACATTTGAACTTGGGTTTGATTCAGTATTAACAGATCTTGACTACACTAATTCTTTATATTA
 161 TAGAACCAACGGAAATATGGGCACTATTTTGAATTCTAGAGATGGTTTTTGTTAAATCTACTAATAAACTGTTCTCTTAG
 241 TAGATTAAGAGAGAGTAATATTAATTGTGCATGTGCAGTTGTATTTCTCATTAACTGACAGTATGCCCATTTGTTTTTAT
 321 GGCTTTCTTATCTAAACTGCACTGATGAACTAGATTAAAGCCTTGGGAGATTTATACTATAAATTCAGTGATGGCAAGAA
 401 CCAACACTGTTTTTTTGTGAGAATTGTCAGTGTAACTATTACCTACCAGTATTGTTCAGAGAGATTGAAACAGAATAAAC
 481 GGGCTGTTCTTGAAGAAGCAAAACCAGAATATGCATTACTTTGGTTTAATACTTAGTGCTAACATTGAAACTGTTGGTGG
 561 TGATGGATTTTGTAGCTTGCTGCTTGTTTCACCACTGGTCAAATTTTAACCATTAAATTGCCATTCACTTTTAGAATCTT
 641 GTATTTAAGTTTTGATTTTCAAATGTTCTGCTTCATGTGTCTGTGAAGAATTGTACTTTAAGTGTGTGTCCTCTGAGGTG
 721 CTTGAGAAAGTGTACACTGCAGAACTGCCCATTCTCATTACTGTGTCCTATTTTATTCATGCCTGTGTGTTTTTCTTAAG
 801 TATGAATTCTAGATACAGCTACTTATGGATTCATCAATATCATGAGCACTTTTGCTGGTTCCAGTCAAATCAATGGCATT
 881 TAATAAATTTTTTAAGAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cuUAGUGU--UUACAG-GAAUUAUc 5'
            :||| |  |||| | :|||||| 
Target 5' caGTCAAATCAATGGCATTTAATAa 3'
862 - 886 146.00 -7.40
2
miRNA  3' cuuAGUGUUU-ACA--GGAAUUAUc 5'
             | |:||| |||  :||||:|| 
Target 5' tacTAATAAACTGTTCTCTTAGTAg 3'
219 - 243 145.00 -10.70
3
miRNA  3' cuuaGUGUUUACAGGAAUUAUc 5'
              ||| ||  |:||| ||| 
Target 5' actaCACTAA--TTCTTTATAt 3'
139 - 158 126.00 -5.34
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN8769188 41 COSMIC
COSN30159963 121 COSMIC
COSN21102673 332 COSMIC
COSN7127665 432 COSMIC
COSN17553510 620 COSMIC
COSN20096516 645 COSMIC
COSN20096514 699 COSMIC
COSN14546910 702 COSMIC
COSN27807902 737 COSMIC
COSN24657265 748 COSMIC
COSN9372251 818 COSMIC
COSN30760387 841 COSMIC
COSN1838385 846 COSMIC
COSN30134723 886 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1226618885 3 dbSNP
rs1355735397 4 dbSNP
rs1292551558 6 dbSNP
rs115785235 8 dbSNP
rs1352069601 10 dbSNP
rs926416132 12 dbSNP
rs1247156798 13 dbSNP
rs750610461 14 dbSNP
rs567071887 18 dbSNP
rs370204754 19 dbSNP
rs1403034447 21 dbSNP
rs941509308 22 dbSNP
rs764644627 25 dbSNP
rs1473887069 27 dbSNP
rs375535828 31 dbSNP
rs910048341 32 dbSNP
rs773950876 34 dbSNP
rs1478567904 38 dbSNP
rs1248605391 39 dbSNP
rs372483121 41 dbSNP
rs749026602 42 dbSNP
rs772683211 45 dbSNP
rs951649095 46 dbSNP
rs1209240931 47 dbSNP
rs530195128 51 dbSNP
rs562956430 54 dbSNP
rs1414604826 68 dbSNP
rs964463335 69 dbSNP
rs922590957 83 dbSNP
rs866354619 85 dbSNP
rs910271942 89 dbSNP
rs545230656 94 dbSNP
rs1018338894 103 dbSNP
rs1359139680 113 dbSNP
rs1027561165 117 dbSNP
rs1354928878 122 dbSNP
rs1000703157 124 dbSNP
rs967875241 130 dbSNP
rs1022121439 132 dbSNP
rs1238141142 136 dbSNP
rs1230231100 138 dbSNP
rs532723871 140 dbSNP
rs1198407012 147 dbSNP
rs1256163832 150 dbSNP
rs1269610129 151 dbSNP
rs1431599161 161 dbSNP
rs1342249160 166 dbSNP
rs961570052 170 dbSNP
rs1404310574 171 dbSNP
rs1009429725 178 dbSNP
rs1471903835 179 dbSNP
rs1158749229 184 dbSNP
rs747479386 187 dbSNP
rs1467729160 209 dbSNP
rs878943856 217 dbSNP
rs760419412 224 dbSNP
rs1374896790 228 dbSNP
rs1002801412 229 dbSNP
rs1348497273 231 dbSNP
rs1390756300 236 dbSNP
rs1165310621 238 dbSNP
rs905961966 239 dbSNP
rs1023073673 249 dbSNP
rs1279240084 251 dbSNP
rs1012061860 253 dbSNP
rs1342233702 253 dbSNP
rs1248991223 255 dbSNP
rs893003672 256 dbSNP
rs1479920563 257 dbSNP
rs72868427 257 dbSNP
rs540675904 264 dbSNP
rs1435323131 265 dbSNP
rs537912698 267 dbSNP
rs1430663267 275 dbSNP
rs1170497814 281 dbSNP
rs1003186265 289 dbSNP
rs904870057 295 dbSNP
rs1476089431 303 dbSNP
rs1294081462 304 dbSNP
rs150362693 308 dbSNP
rs1384916470 313 dbSNP
rs1197873294 316 dbSNP
rs1490347704 320 dbSNP
rs941109054 322 dbSNP
rs910049221 324 dbSNP
rs1047296402 326 dbSNP
rs185851546 331 dbSNP
rs1224254752 333 dbSNP
rs1271796701 336 dbSNP
rs573896953 344 dbSNP
rs930388385 346 dbSNP
rs1272599342 349 dbSNP
rs1489663946 361 dbSNP
rs543159095 365 dbSNP
rs1252774549 373 dbSNP
rs922872593 379 dbSNP
rs769091020 387 dbSNP
rs1417423596 391 dbSNP
rs1428060799 396 dbSNP
rs1281519531 397 dbSNP
rs964051048 401 dbSNP
rs972842283 407 dbSNP
rs1351484516 408 dbSNP
rs1324925917 409 dbSNP
rs1456333453 409 dbSNP
rs575479914 410 dbSNP
rs1035880822 411 dbSNP
rs1295000978 417 dbSNP
rs140289170 424 dbSNP
rs772136699 425 dbSNP
rs1022068975 426 dbSNP
rs1323963368 427 dbSNP
rs1212405673 428 dbSNP
rs1353522578 429 dbSNP
rs1329089257 430 dbSNP
rs1466912874 433 dbSNP
rs1240636584 434 dbSNP
rs1485670513 438 dbSNP
rs1426580125 443 dbSNP
rs1182448842 447 dbSNP
rs1416090746 448 dbSNP
rs148282508 451 dbSNP
rs956556591 453 dbSNP
rs577998064 457 dbSNP
rs745923284 458 dbSNP
rs1315773746 465 dbSNP
rs1458681213 465 dbSNP
rs1003877071 466 dbSNP
rs904816601 472 dbSNP
rs1011700091 475 dbSNP
rs1193242989 475 dbSNP
rs181966332 480 dbSNP
rs1045170356 481 dbSNP
rs1205473780 483 dbSNP
rs1459312537 489 dbSNP
rs1330220828 495 dbSNP
rs1005295059 496 dbSNP
rs1282599814 498 dbSNP
rs888226608 500 dbSNP
rs1211111999 506 dbSNP
rs1239263064 510 dbSNP
rs1031515452 511 dbSNP
rs1047244460 521 dbSNP
rs998659268 524 dbSNP
rs1252523363 529 dbSNP
rs1324132081 532 dbSNP
rs1473541169 534 dbSNP
rs1156525194 544 dbSNP
rs901776860 546 dbSNP
rs930107711 554 dbSNP
rs11885432 556 dbSNP
rs1413692956 563 dbSNP
rs1222050033 565 dbSNP
rs1351567057 566 dbSNP
rs1445025582 578 dbSNP
rs1278097436 589 dbSNP
rs1372325656 593 dbSNP
rs1041267320 594 dbSNP
rs1220003028 595 dbSNP
rs374906288 598 dbSNP
rs1281074097 610 dbSNP
rs1345799867 612 dbSNP
rs184409641 613 dbSNP
rs778244358 622 dbSNP
rs1448443488 628 dbSNP
rs1275451781 632 dbSNP
rs1049167040 638 dbSNP
rs1179607818 639 dbSNP
rs1232070833 641 dbSNP
rs1478258801 642 dbSNP
rs930419792 644 dbSNP
rs918978915 645 dbSNP
rs1335433232 649 dbSNP
rs386389934 649 dbSNP
rs3076528 650 dbSNP
rs1327481553 651 dbSNP
rs35775049 651 dbSNP
rs397774857 651 dbSNP
rs5830428 651 dbSNP
rs1360429035 652 dbSNP
rs1364139624 665 dbSNP
rs942950987 666 dbSNP
rs748873796 672 dbSNP
rs1178844467 677 dbSNP
rs1417915766 679 dbSNP
rs1368970212 688 dbSNP
rs911215280 696 dbSNP
rs200898555 699 dbSNP
rs3076526 700 dbSNP
rs1452119160 701 dbSNP
rs1223407179 702 dbSNP
rs67650866 702 dbSNP
rs75063444 703 dbSNP
rs138161771 704 dbSNP
rs1453368168 704 dbSNP
rs940216855 708 dbSNP
rs928794162 710 dbSNP
rs143174671 716 dbSNP
rs1441718715 719 dbSNP
rs947474547 724 dbSNP
rs1406466500 726 dbSNP
rs913294028 730 dbSNP
rs1392769516 732 dbSNP
rs1440421360 737 dbSNP
rs1298662816 761 dbSNP
rs990521967 763 dbSNP
rs1203073431 765 dbSNP
rs1225255727 770 dbSNP
rs771028510 775 dbSNP
rs957487243 776 dbSNP
rs566701979 791 dbSNP
rs998919528 791 dbSNP
rs965894548 798 dbSNP
rs1208960380 800 dbSNP
rs1018789818 802 dbSNP
rs1444937293 803 dbSNP
rs1316269975 824 dbSNP
rs1368574038 825 dbSNP
rs988868137 826 dbSNP
rs1242077862 827 dbSNP
rs956504336 838 dbSNP
rs1461314291 846 dbSNP
rs1034818208 847 dbSNP
rs982047593 851 dbSNP
rs370767945 852 dbSNP
rs969745591 853 dbSNP
rs548636718 858 dbSNP
rs1313880842 861 dbSNP
rs536771747 862 dbSNP
rs749570423 864 dbSNP
rs1291433272 866 dbSNP
rs777661878 870 dbSNP
rs569412304 873 dbSNP
rs1025372662 883 dbSNP
rs1228718441 884 dbSNP
rs994889530 885 dbSNP
rs867258019 886 dbSNP
rs897477820 887 dbSNP
rs1204210119 890 dbSNP
rs1380692542 894 dbSNP
rs550928662 898 dbSNP
rs1036099499 899 dbSNP
rs1190694994 900 dbSNP
rs1256097472 901 dbSNP
rs1475177413 906 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 9637.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' cuUAGUGU--UUACAG-GAAUUAUc 5'
            :||| |  |||| | :|||||| 
Target 5' caGUCAAAUCAAUGGCAUUUAAUAa 3'
4 - 28
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000379245.4 | 3UTR | UUCCAGUCAAAUCAAUGGCAUUUAAUAAAUUUUUUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
134 hsa-miR-4477a Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055843 PLEKHA1 pleckstrin homology domain containing A1 2 10
MIRT061259 AMOTL1 angiomotin like 1 2 4
MIRT071895 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT076933 MLLT6 MLLT6, PHD finger containing 2 2
MIRT078652 ICT1 mitochondrial ribosomal protein L58 2 2
MIRT083633 PRNP prion protein 2 2
MIRT091629 RPL15 ribosomal protein L15 2 4
MIRT107076 PPP6C protein phosphatase 6 catalytic subunit 2 2
MIRT111191 TRIM33 tripartite motif containing 33 2 2
MIRT114515 ARF6 ADP ribosylation factor 6 2 2
MIRT175250 PSAT1 phosphoserine aminotransferase 1 2 4
MIRT175430 ACSL4 acyl-CoA synthetase long chain family member 4 2 2
MIRT178687 FAM102B family with sequence similarity 102 member B 2 2
MIRT189771 CDADC1 cytidine and dCMP deaminase domain containing 1 2 2
MIRT229450 RPL10 ribosomal protein L10 2 2
MIRT244899 PHF6 PHD finger protein 6 2 2
MIRT249189 AKIRIN1 akirin 1 2 8
MIRT261134 TRIM8 tripartite motif containing 8 2 2
MIRT275561 ZIC5 Zic family member 5 2 4
MIRT275652 ABHD13 abhydrolase domain containing 13 2 2
MIRT288082 UTP18 UTP18, small subunit processome component 2 2
MIRT303605 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT307924 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT316787 FOXC1 forkhead box C1 2 2
MIRT326910 SCML2 Scm polycomb group protein like 2 2 2
MIRT327713 SPIN4 spindlin family member 4 2 2
MIRT331632 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2 2
MIRT342506 TMOD3 tropomodulin 3 2 4
MIRT354470 LRRC58 leucine rich repeat containing 58 2 2
MIRT378711 TRIM24 tripartite motif containing 24 2 2
MIRT407462 YDJC YdjC chitooligosaccharide deacetylase homolog 2 2
MIRT408226 SMAD5 SMAD family member 5 2 4
MIRT441824 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT442783 CHD8 chromodomain helicase DNA binding protein 8 2 2
MIRT443184 NHS NHS actin remodeling regulator 2 4
MIRT447615 CUL3 cullin 3 2 2
MIRT450156 DSEL dermatan sulfate epimerase-like 2 2
MIRT454801 NEDD9 neural precursor cell expressed, developmentally down-regulated 9 2 2
MIRT463050 ZNF644 zinc finger protein 644 2 2
MIRT467400 SOCS3 suppressor of cytokine signaling 3 2 2
MIRT468174 SGMS1 sphingomyelin synthase 1 2 2
MIRT468949 RPS14 ribosomal protein S14 2 6
MIRT469835 R3HDM4 R3H domain containing 4 2 2
MIRT470724 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT470902 PLIN3 perilipin 3 2 2
MIRT472467 NAPG NSF attachment protein gamma 2 12
MIRT472602 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 2
MIRT492350 SEMA7A semaphorin 7A (John Milton Hagen blood group) 2 2
MIRT493840 FOXN3 forkhead box N3 2 4
MIRT496318 DOCK9 dedicator of cytokinesis 9 2 2
MIRT500159 CLEC2D C-type lectin domain family 2 member D 2 8
MIRT500535 XPO4 exportin 4 2 4
MIRT503916 FBXL13 F-box and leucine rich repeat protein 13 2 4
MIRT504003 SAT1 spermidine/spermine N1-acetyltransferase 1 2 4
MIRT505647 SHMT1 serine hydroxymethyltransferase 1 2 4
MIRT506574 MIER3 MIER family member 3 2 4
MIRT506945 HS3ST3B1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 2 4
MIRT508196 RPS19 ribosomal protein S19 2 6
MIRT511417 HSPA13 heat shock protein family A (Hsp70) member 13 2 4
MIRT512326 ACTB actin beta 2 4
MIRT515376 RPL7 ribosomal protein L7 2 2
MIRT520422 TUBG1 tubulin gamma 1 2 4
MIRT524844 ARPP19 cAMP regulated phosphoprotein 19 2 2
MIRT526320 UGT2A1 UDP glucuronosyltransferase family 2 member A1 complex locus 2 2
MIRT526561 UGT2A2 UDP glucuronosyltransferase family 2 member A2 2 2
MIRT528027 FEZ2 fasciculation and elongation protein zeta 2 2 2
MIRT529874 RBM43 RNA binding motif protein 43 2 2
MIRT530826 CLEC4D C-type lectin domain family 4 member D 2 2
MIRT531334 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT532068 CCNB1 cyclin B1 2 4
MIRT532870 ZNF566 zinc finger protein 566 2 2
MIRT535580 NUP35 nucleoporin 35 2 2
MIRT537644 ERGIC2 ERGIC and golgi 2 2 4
MIRT537725 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT538894 BRI3BP BRI3 binding protein 2 2
MIRT538945 BMP2K BMP2 inducible kinase 2 2
MIRT540703 PDPK1 3-phosphoinositide dependent protein kinase 1 2 4
MIRT543210 TMEM117 transmembrane protein 117 2 3
MIRT543357 LYRM2 LYR motif containing 2 2 2
MIRT544905 CLSPN claspin 2 2
MIRT545532 ARF3 ADP ribosylation factor 3 2 2
MIRT546446 SMOC1 SPARC related modular calcium binding 1 2 2
MIRT546882 PURB purine rich element binding protein B 2 4
MIRT547440 MED13 mediator complex subunit 13 2 2
MIRT548027 GOLIM4 golgi integral membrane protein 4 2 2
MIRT548673 CRNKL1 crooked neck pre-mRNA splicing factor 1 2 2
MIRT550435 LLGL2 LLGL2, scribble cell polarity complex component 2 2
MIRT551850 RPS3 ribosomal protein S3 2 2
MIRT556072 MRFAP1 Morf4 family associated protein 1 2 2
MIRT556554 LIMS1 LIM zinc finger domain containing 1 2 2
MIRT557132 HOXA13 homeobox A13 2 2
MIRT557875 FEM1B fem-1 homolog B 2 4
MIRT558146 ELK4 ELK4, ETS transcription factor 2 2
MIRT558862 CD2AP CD2 associated protein 2 2
MIRT558884 CCNE1 cyclin E1 2 4
MIRT558907 CBX5 chromobox 5 2 2
MIRT559175 BRAP BRCA1 associated protein 2 2
MIRT560860 GAL3ST3 galactose-3-O-sulfotransferase 3 2 2
MIRT561729 PPIF peptidylprolyl isomerase F 2 2
MIRT564024 CEBPB CCAAT/enhancer binding protein beta 2 2
MIRT564366 TRMT5 tRNA methyltransferase 5 2 2
MIRT564609 ZNF703 zinc finger protein 703 2 2
MIRT565494 AZF1 azoospermia factor 1 2 2
MIRT565577 SLC6A8 solute carrier family 6 member 8 2 2
MIRT566947 LEPROT leptin receptor overlapping transcript 2 2
MIRT567293 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 2 2
MIRT567308 HMGN2 high mobility group nucleosomal binding domain 2 2 2
MIRT568048 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT571807 PHF19 PHD finger protein 19 2 2
MIRT609234 RBM23 RNA binding motif protein 23 2 2
MIRT610328 SSX5 SSX family member 5 2 2
MIRT611428 UGT8 UDP glycosyltransferase 8 2 4
MIRT611709 SLFN13 schlafen family member 13 2 2
MIRT612069 CEP135 centrosomal protein 135 2 4
MIRT617676 JRKL JRK like 2 2
MIRT623684 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT635634 PRR15L proline rich 15 like 2 2
MIRT636422 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT637011 GPATCH11 G-patch domain containing 11 2 2
MIRT644150 C4orf3 chromosome 4 open reading frame 3 2 2
MIRT648562 MEMO1 mediator of cell motility 1 2 2
MIRT650752 WNT16 Wnt family member 16 2 2
MIRT651914 UEVLD UEV and lactate/malate dehyrogenase domains 2 2
MIRT653556 SLC38A7 solute carrier family 38 member 7 2 2
MIRT692277 XRN2 5'-3' exoribonuclease 2 2 2
MIRT697650 WNK1 WNK lysine deficient protein kinase 1 2 2
MIRT703876 ERCC6 ERCC excision repair 6, chromatin remodeling factor 2 2
MIRT704615 CLIP1 CAP-Gly domain containing linker protein 1 2 2
MIRT708562 BBOX1 gamma-butyrobetaine hydroxylase 1 2 2
MIRT709614 KBTBD6 kelch repeat and BTB domain containing 6 2 2
MIRT712955 SGCD sarcoglycan delta 2 2
MIRT713502 DCAF17 DDB1 and CUL4 associated factor 17 2 2
MIRT720239 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT724255 GLUD1 glutamate dehydrogenase 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4477a Imatinib 5291 NSC743414 approved sensitive High Gastrointestinal Stromal Tumor cell line (882R-NC, 882R-OE, 882R-KD)
hsa-miR-4477a Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-4477a Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)

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