pre-miRNA Information
pre-miRNA hsa-mir-4291   
Genomic Coordinates chr9: 93819357 - 93819421
Description Homo sapiens miR-4291 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4291
Sequence 11| UUCAGCAGGAACAGCU |26
Evidence Experimental
Experiments SOLiD
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1265713434 9 dbSNP
rs1433969451 12 dbSNP
rs1372852268 16 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PPP1R10   
Synonyms CAT53, FB19, PNUTS, PP1R10, R111, p99
Description protein phosphatase 1 regulatory subunit 10
Transcript NM_002714   
Expression
Putative miRNA Targets on PPP1R10
3'UTR of PPP1R10
(miRNA target sites are highlighted)
>PPP1R10|NM_002714|3'UTR
   1 GGACCATTTGCCTGCCCTGTTCACACAACCCCTGTGGACTGCAGCCTCGCTCTTTCCACCCTGTTATGGCTTCTGTGAGG
  81 CCCATTTTCCCTTTTCCCCAGCTGATGAGGAGCCGGCCCCCTCAGTTCCCACTTGCTTGGGTTCCTGGGGGTTTTCTGAT
 161 CACTGGTGCGCATTGATGTACATATTTTCCTCCAGTCTGGGGAGGAGAGAGACTGGAAACGTTCCTGGACTGCTGAAGAG
 241 GAGACCCAGTTGGCTTCACTTTTTGAGAAGATTCGCCCTGTACCCCAAACCCCTTTCCAGTATTACCCTTAATGCTTGAG
 321 AACCTAAAGCTGGTTATCCTGGCGAACACCCCTACCCTTCTATTGCGGGTCCCCACATGCACACAGAACTCTGACACAGG
 401 ATCAGCTGCACTTAAGAAATCATCCCAGCTAAGTTCATTATTCCTCATGGGGTGGGGAGATGCTGAAAGGGGTATTGTAT
 481 ATCCCACTGCACTGAGAGGGCTCAATCAGCTGGATTTGAGTTCTGGAACACACATCATCCCCACCCCTCCCCCAGCGTGG
 561 GCTCACCATTCTTAGTCCTTTCTCAAGTGGGACCTTCAACTTTCTGTGAACACCCAGTCTGCGTCCTGGGTCTGCTAGGT
 641 TCGATGATGGCGAACTCGTATCTGCATCCGGTGCAAGTTTTAGCTGGCAGAGGTGAGACCGGTGGTGCTGGTCTGCCTTT
 721 GCCAACTATAGCCAGTCTGGAGACTTGATAAAATACTTCAGTGAGACCAGCTTCTCATCAACTTGGGCCCGGCGTGCTGG
 801 GCCTGAAAGTCACACTACATGCACTGCCTTTGGGAGTCAGCTCACTCCCTGCTCCCACCTGGAACCTTGCCAGCGTGAAG
 881 GAGGCTTCCAGGTACTTCACCCTGTCAACCACCTCTGAATCCCCACCAGGCGCCTTCCTGGGTGGATTCAACAAGATGAT
 961 TTTGCCCTTTCCCAGTTCTCTCCTTCACTTTGGCATCAGTTGTTTTCTATGAAAACAGTGGATTGGTTGGGTTTTGTGCA
1041 GGGTCTTGGGTTAGAGCCAAAATGGATTTGAGGATGAGTATTTTTTTTTTTGGTTTTGTATATTTTGTACATTAATAATA
1121 AACAGTGGAAAGAGAAGCAGCTTATTTAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ucgaCAAG-----GACGACUu 5'
              ||||     ||||||| 
Target 5' aaacGTTCCTGGACTGCTGAa 3'
217 - 237 144.00 -15.00
2
miRNA  3' ucGACAA--GGACGACUu 5'
            || ||  || ||||| 
Target 5' ccCTTTTCCCCAGCTGAt 3'
89 - 106 120.00 -8.90
3
miRNA  3' ucgacaaggACGACUu 5'
                   |||||| 
Target 5' gtggggagaTGCTGAa 3'
452 - 467 120.00 -8.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN510166 24 COSMIC
COSN32062576 44 COSMIC
COSN32062575 47 COSMIC
COSN30168270 48 COSMIC
COSN14216918 49 COSMIC
COSN30580963 60 COSMIC
COSN30526102 66 COSMIC
COSN30493211 80 COSMIC
COSN30478156 89 COSMIC
COSN18731418 169 COSMIC
COSN31553953 170 COSMIC
COSN17132026 308 COSMIC
COSN31585887 344 COSMIC
COSN31534873 418 COSMIC
COSN24301611 517 COSMIC
COSN31491091 628 COSMIC
COSN31521411 640 COSMIC
COSN31576089 678 COSMIC
COSN31541655 701 COSMIC
COSN31523070 721 COSMIC
COSN30173962 747 COSMIC
COSN2159268 790 COSMIC
COSN26409896 840 COSMIC
COSN30174404 881 COSMIC
COSN30170910 949 COSMIC
COSN2159267 1033 COSMIC
COSN27527481 1080 COSMIC
COSN27523368 1081 COSMIC
COSN31549079 1118 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs944078438 2 dbSNP
rs767048454 3 dbSNP
rs1405791901 4 dbSNP
rs1018531696 12 dbSNP
rs199972723 15 dbSNP
rs553033386 17 dbSNP
rs1491396324 18 dbSNP
rs766896397 21 dbSNP
rs914623253 25 dbSNP
rs1159795297 26 dbSNP
rs750766570 29 dbSNP
rs200755736 30 dbSNP
rs1180934270 31 dbSNP
rs762290679 34 dbSNP
rs372167283 41 dbSNP
rs372002886 42 dbSNP
rs1488389183 44 dbSNP
rs368317640 48 dbSNP
rs367778352 49 dbSNP
rs769769872 51 dbSNP
rs956399339 63 dbSNP
rs1031946378 67 dbSNP
rs1405440461 67 dbSNP
rs891282713 74 dbSNP
rs982087271 90 dbSNP
rs764023702 93 dbSNP
rs971609190 94 dbSNP
rs1392180377 96 dbSNP
rs1364940950 104 dbSNP
rs369182442 105 dbSNP
rs1010376676 106 dbSNP
rs1294216945 114 dbSNP
rs1292129739 115 dbSNP
rs150431954 116 dbSNP
rs959119088 118 dbSNP
rs186731888 128 dbSNP
rs1418419834 138 dbSNP
rs183414024 150 dbSNP
rs752824721 158 dbSNP
rs767698866 161 dbSNP
rs542481634 166 dbSNP
rs567406891 169 dbSNP
rs550690891 170 dbSNP
rs1252290242 182 dbSNP
rs1472949660 189 dbSNP
rs141443669 192 dbSNP
rs190640153 193 dbSNP
rs757387037 197 dbSNP
rs796337572 201 dbSNP
rs1459233756 212 dbSNP
rs1321794535 213 dbSNP
rs1490106287 214 dbSNP
rs186297431 216 dbSNP
rs181958763 221 dbSNP
rs1036981263 226 dbSNP
rs1008576537 233 dbSNP
rs370177437 241 dbSNP
rs1260190345 270 dbSNP
rs1282430529 271 dbSNP
rs1049723288 273 dbSNP
rs112981881 274 dbSNP
rs951508082 275 dbSNP
rs529747494 276 dbSNP
rs1299419579 278 dbSNP
rs1258036459 280 dbSNP
rs1442572129 282 dbSNP
rs974598174 285 dbSNP
rs1186419321 287 dbSNP
rs560942574 292 dbSNP
rs1473285453 294 dbSNP
rs1159314530 297 dbSNP
rs1346477672 300 dbSNP
rs1456138310 302 dbSNP
rs1305397581 324 dbSNP
rs1403357158 326 dbSNP
rs1398686907 339 dbSNP
rs962702932 343 dbSNP
rs1018313587 344 dbSNP
rs1229048898 350 dbSNP
rs1287862009 362 dbSNP
rs878858453 366 dbSNP
rs1226528331 367 dbSNP
rs1257481537 369 dbSNP
rs1365037523 371 dbSNP
rs772788595 377 dbSNP
rs1253607438 380 dbSNP
rs1030203784 381 dbSNP
rs1010410140 386 dbSNP
rs959024227 390 dbSNP
rs891991629 398 dbSNP
rs1054206502 405 dbSNP
rs1471860597 412 dbSNP
rs999925257 414 dbSNP
rs1378774510 415 dbSNP
rs1465849428 423 dbSNP
rs1026761045 425 dbSNP
rs1264424 428 dbSNP
rs1201373380 431 dbSNP
rs1445189625 433 dbSNP
rs1044052600 436 dbSNP
rs1388655991 443 dbSNP
rs1015863840 444 dbSNP
rs1007980527 447 dbSNP
rs1232234849 451 dbSNP
rs1486848896 452 dbSNP
rs1277954752 454 dbSNP
rs949946985 456 dbSNP
rs1254344900 461 dbSNP
rs1203253703 474 dbSNP
rs1343811620 475 dbSNP
rs917168278 476 dbSNP
rs575387299 477 dbSNP
rs1324619298 482 dbSNP
rs1205437985 485 dbSNP
rs558420398 487 dbSNP
rs1047985838 488 dbSNP
rs1481776878 489 dbSNP
rs545211348 498 dbSNP
rs376026124 499 dbSNP
rs974169784 501 dbSNP
rs941456644 502 dbSNP
rs550297715 503 dbSNP
rs1430568449 514 dbSNP
rs985459035 522 dbSNP
rs1384435100 523 dbSNP
rs1459482986 526 dbSNP
rs893114083 533 dbSNP
rs1386477344 544 dbSNP
rs573020651 549 dbSNP
rs1300906008 552 dbSNP
rs767421599 553 dbSNP
rs143258831 556 dbSNP
rs768400868 557 dbSNP
rs989504515 561 dbSNP
rs1178172959 568 dbSNP
rs924681799 574 dbSNP
rs956214848 574 dbSNP
rs1488417127 579 dbSNP
rs1208582973 580 dbSNP
rs536226785 585 dbSNP
rs1033623797 603 dbSNP
rs1188375325 606 dbSNP
rs567371846 612 dbSNP
rs114770145 613 dbSNP
rs537111787 614 dbSNP
rs867824807 622 dbSNP
rs149134091 623 dbSNP
rs146827214 634 dbSNP
rs371990481 634 dbSNP
rs1323789275 636 dbSNP
rs1430293945 637 dbSNP
rs1435502749 642 dbSNP
rs1296657769 643 dbSNP
rs112122750 650 dbSNP
rs961425927 651 dbSNP
rs1241350343 652 dbSNP
rs551652161 657 dbSNP
rs779929023 658 dbSNP
rs1230996992 662 dbSNP
rs528697590 665 dbSNP
rs1022548041 669 dbSNP
rs1194324529 670 dbSNP
rs185864285 673 dbSNP
rs1208447316 675 dbSNP
rs1240754488 690 dbSNP
rs1484322788 692 dbSNP
rs1339079198 700 dbSNP
rs1413423195 701 dbSNP
rs1422123795 706 dbSNP
rs1013883843 708 dbSNP
rs955187403 715 dbSNP
rs1457722245 717 dbSNP
rs1319597729 720 dbSNP
rs1343220082 723 dbSNP
rs1028225298 728 dbSNP
rs1252316271 733 dbSNP
rs147648498 734 dbSNP
rs1412360496 740 dbSNP
rs893028421 754 dbSNP
rs549725513 755 dbSNP
rs1047637346 777 dbSNP
rs998834103 778 dbSNP
rs1282526713 781 dbSNP
rs147002354 782 dbSNP
rs1451219742 787 dbSNP
rs560905693 788 dbSNP
rs1037554332 790 dbSNP
rs1406285253 791 dbSNP
rs950220436 793 dbSNP
rs544236208 794 dbSNP
rs1158352423 797 dbSNP
rs911315443 798 dbSNP
rs530494737 809 dbSNP
rs1415930396 819 dbSNP
rs147812868 822 dbSNP
rs1176585822 826 dbSNP
rs894637168 829 dbSNP
rs1463431877 833 dbSNP
rs1383360101 838 dbSNP
rs1182933956 839 dbSNP
rs1408756103 840 dbSNP
rs1055946673 841 dbSNP
rs930902386 845 dbSNP
rs1220153110 846 dbSNP
rs922615032 849 dbSNP
rs1245049686 851 dbSNP
rs1207563541 852 dbSNP
rs544861349 854 dbSNP
rs1231082806 861 dbSNP
rs908310168 862 dbSNP
rs989064205 869 dbSNP
rs7774485 878 dbSNP
rs1432420723 879 dbSNP
rs1251652426 882 dbSNP
rs955096512 890 dbSNP
rs1033156289 896 dbSNP
rs1370861884 898 dbSNP
rs1028130499 912 dbSNP
rs113572597 913 dbSNP
rs1326334736 914 dbSNP
rs975176552 915 dbSNP
rs1357772420 925 dbSNP
rs1437841974 925 dbSNP
rs1274560181 931 dbSNP
rs556249682 932 dbSNP
rs1231148726 936 dbSNP
rs969746727 938 dbSNP
rs1359468310 940 dbSNP
rs1194103433 949 dbSNP
rs752802794 962 dbSNP
rs1022662035 967 dbSNP
rs552846805 970 dbSNP
rs1013999309 971 dbSNP
rs542555398 972 dbSNP
rs149692837 973 dbSNP
rs181026703 978 dbSNP
rs1190322437 981 dbSNP
rs1390375473 983 dbSNP
rs1474888211 983 dbSNP
rs1165607933 984 dbSNP
rs1024426902 987 dbSNP
rs537471889 988 dbSNP
rs1325808085 1002 dbSNP
rs1393000326 1007 dbSNP
rs1392864282 1009 dbSNP
rs894542283 1019 dbSNP
rs865889383 1023 dbSNP
rs1162777339 1030 dbSNP
rs200804096 1036 dbSNP
rs899449988 1041 dbSNP
rs1037504087 1042 dbSNP
rs1225525930 1052 dbSNP
rs1264425 1065 dbSNP
rs772584888 1070 dbSNP
rs1357130622 1072 dbSNP
rs1227884900 1073 dbSNP
rs1156940723 1078 dbSNP
rs939708981 1078 dbSNP
rs1248441749 1079 dbSNP
rs571613363 1080 dbSNP
rs1472837811 1082 dbSNP
rs766150926 1082 dbSNP
rs1163634321 1085 dbSNP
rs908229971 1086 dbSNP
rs1049821049 1092 dbSNP
rs542567883 1092 dbSNP
rs986406824 1092 dbSNP
rs1469800443 1093 dbSNP
rs933743919 1098 dbSNP
rs1184292645 1100 dbSNP
rs920978721 1106 dbSNP
rs975251906 1110 dbSNP
rs1489943800 1116 dbSNP
rs1268648607 1122 dbSNP
rs1332543456 1123 dbSNP
rs1230158227 1129 dbSNP
rs934098246 1134 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 5514.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset GSM4903825
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / PID14_NS
Location of target site NM_002714 | 3UTR | AUGGGGUGGGGAGAUGCUGAAAGGGGUAUUGUAUAUCCCACUGCACUGAGAGGGCUCAAUCAGCUGGAUUUGAGUUCUGGAACACACAUCAUCCCCACCCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161237
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903826
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / PID21_NS
Location of target site NM_002714 | 3UTR | AUUGAUGUACAUAUUUUCCUCCAGUCUGGGGAGGAGAGAGACUGGAAACGUUCCUGGACUGCUGAAGAGGAGACCCAGUUGGCUUCACUUUUUGAGAAGAUUCGCCCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161237
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000376511.2 | 3UTR | UGAAAGGGGUAUUGUAUAUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
82 hsa-miR-4291 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT102445 CALU calumenin 2 4
MIRT108677 ZBTB33 zinc finger and BTB domain containing 33 2 4
MIRT125969 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 6
MIRT179018 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 4
MIRT379033 CDK6 cyclin dependent kinase 6 2 6
MIRT442473 CPEB4 cytoplasmic polyadenylation element binding protein 4 2 2
MIRT442910 PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 2 2
MIRT442979 ZNF736 zinc finger protein 736 2 2
MIRT445663 TNFSF15 TNF superfamily member 15 2 2
MIRT446237 FZD6 frizzled class receptor 6 2 2
MIRT448860 FAM49B family with sequence similarity 49 member B 2 2
MIRT455559 TRAF1 TNF receptor associated factor 1 2 2
MIRT459704 ZNF641 zinc finger protein 641 2 2
MIRT460608 FEM1A fem-1 homolog A 2 2
MIRT462251 LAMA4 laminin subunit alpha 4 2 2
MIRT462469 FIZ1 FLT3 interacting zinc finger 1 2 2
MIRT466656 TAF1D TATA-box binding protein associated factor, RNA polymerase I subunit D 2 6
MIRT466841 STX6 syntaxin 6 2 2
MIRT471403 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT471517 PCGF3 polycomb group ring finger 3 2 2
MIRT471681 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT472858 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT474813 KIAA0226 RUN and cysteine rich domain containing beclin 1 interacting protein 2 2
MIRT474931 KCTD15 potassium channel tetramerization domain containing 15 2 2
MIRT475814 HDGF heparin binding growth factor 2 2
MIRT480434 C17orf49 chromosome 17 open reading frame 49 2 2
MIRT480903 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough 2 2
MIRT481478 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT484982 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 8
MIRT485019 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 8
MIRT485036 TMEM189 transmembrane protein 189 2 8
MIRT495074 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT496004 CD180 CD180 molecule 2 2
MIRT500675 TRIM37 tripartite motif containing 37 2 2
MIRT504544 ZNF417 zinc finger protein 417 2 6
MIRT506782 KLHL15 kelch like family member 15 2 6
MIRT507256 FGF2 fibroblast growth factor 2 2 6
MIRT507386 EN2 engrailed homeobox 2 2 2
MIRT512505 BTBD19 BTB domain containing 19 2 2
MIRT516903 CTSB cathepsin B 2 2
MIRT528124 PPP1R10 protein phosphatase 1 regulatory subunit 10 2 2
MIRT528874 ATF3 activating transcription factor 3 2 2
MIRT536091 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT541079 RLIM ring finger protein, LIM domain interacting 2 2
MIRT541099 RAF1 Raf-1 proto-oncogene, serine/threonine kinase 2 2
MIRT545360 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT545831 ZNF367 zinc finger protein 367 2 4
MIRT547115 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 2
MIRT547312 NPTN neuroplastin 2 2
MIRT547959 HIGD1A HIG1 hypoxia inducible domain family member 1A 2 4
MIRT549943 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT550749 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT565145 TUBB2A tubulin beta 2A class IIa 2 2
MIRT571050 POLQ DNA polymerase theta 2 2
MIRT571361 ZNF45 zinc finger protein 45 2 2
MIRT610133 FOXI2 forkhead box I2 2 2
MIRT613145 DSE dermatan sulfate epimerase 2 2
MIRT613379 ABCC12 ATP binding cassette subfamily C member 12 2 2
MIRT615752 C6 complement C6 2 2
MIRT616460 ADRA2B adrenoceptor alpha 2B 2 2
MIRT616719 FEM1B fem-1 homolog B 2 2
MIRT618312 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT631491 RASSF4 Ras association domain family member 4 2 2
MIRT643134 PLCXD2 phosphatidylinositol specific phospholipase C X domain containing 2 2 2
MIRT643482 DISC1 disrupted in schizophrenia 1 2 2
MIRT649715 TWSG1 twisted gastrulation BMP signaling modulator 1 2 2
MIRT653542 SLC38A7 solute carrier family 38 member 7 2 2
MIRT666307 SLC22A3 solute carrier family 22 member 3 2 2
MIRT692005 NAP1L4 nucleosome assembly protein 1 like 4 2 2
MIRT696838 ARL2BP ADP ribosylation factor like GTPase 2 binding protein 2 2
MIRT698204 TMEM248 transmembrane protein 248 2 2
MIRT703316 GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 2 2
MIRT709376 FAM13A family with sequence similarity 13 member A 2 2
MIRT710112 MED23 mediator complex subunit 23 2 2
MIRT711975 HOMER2 homer scaffolding protein 2 2 2
MIRT712275 PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 2 2
MIRT714108 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT719113 MAML1 mastermind like transcriptional coactivator 1 2 2
MIRT719727 SLC39A11 solute carrier family 39 member 11 2 2
MIRT720018 TFAP2C transcription factor AP-2 gamma 2 2
MIRT720358 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT720372 NUDT3 nudix hydrolase 3 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4291 Platinum-based doublet chemotherapy resistant High Lung Adenocarcinoma tissue
hsa-miR-4291 Platinum 23939 resistant High Ovarian Cancer tissue
hsa-miR-4291 Paclitaxel 36314 NSC125973 approved resistant High Prostate Cancer cell line (DU-145, PC-3)
hsa-miR-4291 Doxorubicin 31703 NSC123127 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-4291 Radioactivity Iodine resistant High Papillary Thyroid Cancer tissue
hsa-miR-4291 Cisplatin 5460033 NSC119875 approved resistant High Hypopharyngeal Cancer cell line (FaDu)
hsa-miR-4291 Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-4291 Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-4291 Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (cytosolic RNA)
hsa-miR-4291 Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-4291 Platinum-based doublet chemotherapy resistant tissue (lung adenocarcinoma)
hsa-miR-4291 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4291 Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR3)
hsa-miR-4291 Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)

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