pre-miRNA Information
pre-miRNA hsa-mir-4282   
Genomic Coordinates chr6: 72967687 - 72967753
Description Homo sapiens miR-4282 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4282
Sequence 40| UAAAAUUUGCAUCCAGGA |57
Evidence Experimental
Experiments SOLiD
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN32074657 13 COSMIC
COSN6331413 18 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1195771339 5 dbSNP
rs755058572 6 dbSNP
rs1245753664 11 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MRPS16   
Synonyms CGI-132, COXPD2, MRP-S16, RPMS16
Description mitochondrial ribosomal protein S16
Transcript NM_016065   
Expression
Putative miRNA Targets on MRPS16
3'UTR of MRPS16
(miRNA target sites are highlighted)
>MRPS16|NM_016065|3'UTR
   1 ATGAGCTGACTTTAGTGAGCATAGCAGTGGGAACAAGGTCAAGGTCCTTTTGAAACACTGCAGCGATCTTAATTTTGTTA
  81 GATTTGGAGTTCAATAAATGGAGTATCCTGAGTTGCCCTTGCTCTTCTGGCCTGGCCTGCACAGGGCCCAGGGAGAGATT
 161 TGTTCTTGTGTGACTTAGAGCTGGGTGTGGGTACTAATTAGCTTTTTTCGACTTTGTCTTGGGATAGACAGTGGCTATGG
 241 GAGGATTGGACTTTTGAGTTGGGCTCTGGGTCTCTTGGACAACTTTACAATTTACTGGCTTCCAAGACTTCCTGCTTCAA
 321 AACCCCCAGCCAGACTATTCATGGCCCATTCAGATCTTCATGTTCATCCCACAAGTGCAAGAACAGTTAACCTTTCTTAA
 401 TTGATTTTTGTAATTGGAGGTTTATATTGTCTTGCCTAATGCATATTCTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTT
 481 GTTCTGTTGCCAGGCTGGAGTGCGGTGGTGCAATCTCAGCTCACTGCAATCTCCACCTCCTGGGTTCAAGAGGTTCTCCT
 561 GCCTCAGCCTCCTGAGTAGCCGGGGAGCTACAAGCATGCACCACCACACCCAGCTAATTTTTTTTTTTTTTTTGAGAGGA
 641 GTCTCGCTCTGTCGCCCAGGCTTGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCTGTCTCCTGGGTTCATGCCAT
 721 TCTCCTGCTTCAGCCTCCCGAGTAGTCCCAGGAGTAGCTGGGACTACAGGTGCCCACCACCACACCCAGCTAATTTTTTT
 801 GTATTTTTAGTAGAGATGGGGTTTCACCATGTTATCCAGGATGGTTTTGATCTCCTGACCTCGTGATCCGCCCGCCTTGG
 881 CCTCCCAAAAGTGCTGGGATTATAGGCGTGAGCCACCGCCCGGGCAAATTTTTGTATTTTTAGTAGAGATGGGGTTTCAC
 961 CGTGTTGGCCAGGATGGTCTCAATCTGACCTTGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTAGGATTACTGGCGTGA
1041 GCCACCACTCCTAGCCTTAATGCATATTCTTAAATATACAAAGGTAGATTTGTTATGAAAATTGCTTTGGGGCTCTAATA
1121 ACCTACCTTTTAAGAATGAGAAACTGCTGGGCTTAAGGGAGTTCAGTATGAATCAAGATTGAACCATTCAAATGTGGCTG
1201 TGATTTCTGCATATATCATAGATGGGATCCTTCTGAGAATACTGGAATAGGGAATTAGGACACCAAGCCAATTCAGCTGT
1281 GAACCTTATTCTTGTACTTTTCTTTCTTGCTGGTAATTTTATGGAGCAGGTTAAGAAGGCTGCTCTGTGTTAGGATAAAC
1361 TGTATACCAATAATGTTGACAACCTGTAATGAGTGTTGCATTTTACTTCTTGTATCTTTTCCTTCCTACCTTGATGCCAG
1441 TAATCTATAAGGGATCTTTATAGTTTGAATGTATTTGAATAACTTCAGTATACTTTAGTTCTACTTTTTTATTTGACTCA
1521 CAACCATTCTTAGGTCTCAAGTATTCCCATGTGTTTTAAAAGCCTGAAGTCAGTGAGATGAAATTCAACATCAAGAATTT
1601 GAAGTAACTTGTAAGGAAAAATAATATAAAGATACCATTGGGGCAGTGGCTCACACCTGTAATCTCAGCACTTTGGGAGG
1681 CTGAGGTGGAAGGATCACTTGAAGCCAGAGTTTGAGACCAGCCTGTGCAACACAGCAAGACCCCGTCTCTACAAAAACTT
1761 AAAAAATTAGCTGGCTGTGGTGTTGCTCACCCATAGTTCCAGCTACTCGGGAAGCTGAGGCAGTAAGATCACTTGAGCCC
1841 AGGAGGCCGATGCTGCAGTGAACTGTGATTGTTCCACTACAGTCCAGCCTGGGTGACAGAGAAAAGAAAAAGAAAACATT
1921 ACATAATTTGGCTAGAGCATAATAATTTGATTTTCTGGTTTTTGAAAATTTGAGTTGCAATAAAAGGATATTTCAGTGTG
2001 CGATTTCAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agGACCUACGUUUAAAAu 5'
            | ||  ||||||||| 
Target 5' gcCCGG--GCAAATTTTt 3'
918 - 933 152.00 -10.40
2
miRNA  3' agGACC---UACGUUUAAAau 5'
            ||||    || ||||||  
Target 5' ttCTGGTTTTTGAAAATTTga 3'
1953 - 1973 132.00 -7.20
3
miRNA  3' agGACCUACGUUUAAAAu 5'
            || | ||  |||||| 
Target 5' ttCTTGCTGGTAATTTTa 3'
1304 - 1321 124.00 -7.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
300712 451 ClinVar
300704 634 ClinVar
300699 857 ClinVar
300694 1294 ClinVar
300690 1503 ClinVar
COSN30456173 46 COSMIC
COSN30456197 47 COSMIC
COSN30498736 64 COSMIC
COSN31539865 99 COSMIC
COSN22599469 144 COSMIC
COSN31524909 210 COSMIC
COSN7068209 396 COSMIC
COSN1500243 423 COSMIC
COSN5883398 1135 COSMIC
COSN30499819 1179 COSMIC
COSN30122968 1306 COSMIC
COSN30289997 1383 COSMIC
COSN25780241 1411 COSMIC
COSN25778500 1413 COSMIC
COSM8915130 1559 COSMIC
COSN21538071 1595 COSMIC
COSN30114063 1595 COSMIC
COSN30123165 1633 COSMIC
COSN28565045 1645 COSMIC
COSN30667868 1665 COSMIC
COSN1122343 1670 COSMIC
COSN20046248 1681 COSMIC
COSN28853465 1707 COSMIC
COSN31591003 1745 COSMIC
COSN30128131 1839 COSMIC
COSN28568201 1879 COSMIC
COSN28857495 1899 COSMIC
COSN30129020 1912 COSMIC
COSN28201843 1996 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1457791352 2 dbSNP
rs768838682 5 dbSNP
rs1467603217 6 dbSNP
rs377271845 11 dbSNP
rs7075371 13 dbSNP
rs1208512036 21 dbSNP
rs778863355 22 dbSNP
rs1266613233 24 dbSNP
rs952519857 27 dbSNP
rs753328308 28 dbSNP
rs770692603 29 dbSNP
rs1311701212 37 dbSNP
rs1165332331 39 dbSNP
rs749034956 41 dbSNP
rs777576361 47 dbSNP
rs1163004038 61 dbSNP
rs886047198 65 dbSNP
rs973085337 76 dbSNP
rs539530542 86 dbSNP
rs1330653744 88 dbSNP
rs1035500895 94 dbSNP
rs536907771 99 dbSNP
rs923184891 103 dbSNP
rs1378113971 108 dbSNP
rs1231108446 110 dbSNP
rs971949423 118 dbSNP
rs886047197 121 dbSNP
rs1197444438 122 dbSNP
rs1272973164 131 dbSNP
rs961380322 134 dbSNP
rs1190160614 145 dbSNP
rs1238442676 153 dbSNP
rs1475044842 155 dbSNP
rs1186088811 158 dbSNP
rs1016037718 167 dbSNP
rs970787503 168 dbSNP
rs1289993899 170 dbSNP
rs766015986 174 dbSNP
rs1416128107 178 dbSNP
rs565826277 181 dbSNP
rs1326833407 190 dbSNP
rs1358367287 190 dbSNP
rs1480701692 193 dbSNP
rs1388399450 206 dbSNP
rs952943534 209 dbSNP
rs1237056976 210 dbSNP
rs766114937 212 dbSNP
rs1340740383 216 dbSNP
rs547392259 217 dbSNP
rs893825697 218 dbSNP
rs1267920469 223 dbSNP
rs1346452919 226 dbSNP
rs1391588294 229 dbSNP
rs1002332895 230 dbSNP
rs1053771859 241 dbSNP
rs1485580302 243 dbSNP
rs906687377 245 dbSNP
rs999795130 246 dbSNP
rs1009803757 247 dbSNP
rs1192686205 248 dbSNP
rs892700699 259 dbSNP
rs1173105209 274 dbSNP
rs181757719 280 dbSNP
rs561738482 281 dbSNP
rs1299785421 285 dbSNP
rs550177586 286 dbSNP
rs868175291 295 dbSNP
rs1360877505 296 dbSNP
rs1399044533 302 dbSNP
rs532037332 306 dbSNP
rs944229134 309 dbSNP
rs1332328878 311 dbSNP
rs936342266 316 dbSNP
rs190204061 323 dbSNP
rs1050130920 337 dbSNP
rs1049972935 340 dbSNP
rs931059294 341 dbSNP
rs1288635542 344 dbSNP
rs1362400501 353 dbSNP
rs1204781295 369 dbSNP
rs919604644 381 dbSNP
rs923070374 383 dbSNP
rs186383176 384 dbSNP
rs1394446701 397 dbSNP
rs939948341 401 dbSNP
rs1253082711 410 dbSNP
rs928515017 410 dbSNP
rs1212456175 416 dbSNP
rs1466736167 442 dbSNP
rs11598278 444 dbSNP
rs201473932 448 dbSNP
rs1223975125 450 dbSNP
rs886047196 451 dbSNP
rs1392424675 452 dbSNP
rs75554141 452 dbSNP
rs1322285839 453 dbSNP
rs1368092845 453 dbSNP
rs1439382662 454 dbSNP
rs1277519416 458 dbSNP
rs1354885092 460 dbSNP
rs984539114 466 dbSNP
rs1371569848 467 dbSNP
rs113258240 468 dbSNP
rs1180443881 468 dbSNP
rs1210608478 468 dbSNP
rs1252483489 468 dbSNP
rs1358699301 468 dbSNP
rs892096228 468 dbSNP
rs1325123670 469 dbSNP
rs551135342 470 dbSNP
rs567157597 470 dbSNP
rs886047195 472 dbSNP
rs12249492 473 dbSNP
rs936343274 475 dbSNP
rs1033745206 486 dbSNP
rs560241550 502 dbSNP
rs1174607415 503 dbSNP
rs1002216813 504 dbSNP
rs1466683087 508 dbSNP
rs1334021369 511 dbSNP
rs970774311 517 dbSNP
rs1025122157 520 dbSNP
rs1009689630 522 dbSNP
rs1342595528 523 dbSNP
rs12257322 529 dbSNP
rs1272716225 539 dbSNP
rs772787486 540 dbSNP
rs1332840222 545 dbSNP
rs1200596566 553 dbSNP
rs1054005884 559 dbSNP
rs1480253644 561 dbSNP
rs1175365290 564 dbSNP
rs886047194 566 dbSNP
rs11000563 567 dbSNP
rs1424111179 578 dbSNP
rs574459836 581 dbSNP
rs1000941780 582 dbSNP
rs888762048 587 dbSNP
rs886047193 593 dbSNP
rs1050183378 599 dbSNP
rs12257264 600 dbSNP
rs1296885916 604 dbSNP
rs1404816298 606 dbSNP
rs1415767361 608 dbSNP
rs1292975665 610 dbSNP
rs1310660946 615 dbSNP
rs1353758366 634 dbSNP
rs1389414487 634 dbSNP
rs555061429 634 dbSNP
rs886047192 634 dbSNP
rs1216106333 635 dbSNP
rs901573747 639 dbSNP
rs145765900 642 dbSNP
rs1483490425 642 dbSNP
rs1281904196 645 dbSNP
rs940503544 645 dbSNP
rs1193873327 646 dbSNP
rs909128044 648 dbSNP
rs1426160314 653 dbSNP
rs576324784 654 dbSNP
rs1379875055 661 dbSNP
rs1435769692 663 dbSNP
rs367784695 669 dbSNP
rs931319367 675 dbSNP
rs1302632886 676 dbSNP
rs926655352 677 dbSNP
rs868814192 678 dbSNP
rs374499787 683 dbSNP
rs1367468308 684 dbSNP
rs1348465008 688 dbSNP
rs1233358244 696 dbSNP
rs1277953584 701 dbSNP
rs970826554 701 dbSNP
rs1216899696 702 dbSNP
rs1241143467 703 dbSNP
rs1270802325 703 dbSNP
rs866967459 710 dbSNP
rs1192394986 713 dbSNP
rs1270151030 715 dbSNP
rs1455100878 718 dbSNP
rs1173515445 728 dbSNP
rs981321053 729 dbSNP
rs1160187412 739 dbSNP
rs886047191 740 dbSNP
rs886047190 741 dbSNP
rs886047189 742 dbSNP
rs969897187 746 dbSNP
rs1022781208 748 dbSNP
rs1440123583 752 dbSNP
rs991333622 753 dbSNP
rs1435799219 755 dbSNP
rs958121983 767 dbSNP
rs539672097 768 dbSNP
rs1283167282 773 dbSNP
rs1314737128 777 dbSNP
rs1032766101 778 dbSNP
rs1253114286 780 dbSNP
rs1432130469 786 dbSNP
rs181174969 793 dbSNP
rs1442009816 794 dbSNP
rs1178110544 801 dbSNP
rs1407593830 801 dbSNP
rs1399198809 802 dbSNP
rs1186536146 803 dbSNP
rs776839878 804 dbSNP
rs1474788394 811 dbSNP
rs1395326785 814 dbSNP
rs1460972921 815 dbSNP
rs1378982013 817 dbSNP
rs1442715937 820 dbSNP
rs1278757759 825 dbSNP
rs1370853039 829 dbSNP
rs1240068891 830 dbSNP
rs902515132 830 dbSNP
rs1273365325 834 dbSNP
rs769094094 835 dbSNP
rs1271877924 847 dbSNP
rs1440038227 848 dbSNP
rs886047188 857 dbSNP
rs1008472074 858 dbSNP
rs1468865944 860 dbSNP
rs1279280335 862 dbSNP
rs1208675924 863 dbSNP
rs189233953 863 dbSNP
rs535564295 868 dbSNP
rs1049899011 869 dbSNP
rs372270481 870 dbSNP
rs1352554878 873 dbSNP
rs1449942035 874 dbSNP
rs1028686005 877 dbSNP
rs1354399474 878 dbSNP
rs1230977886 888 dbSNP
rs1339429772 891 dbSNP
rs1359943489 891 dbSNP
rs1215673804 892 dbSNP
rs1272904791 895 dbSNP
rs898209437 896 dbSNP
rs1286212074 902 dbSNP
rs997179677 903 dbSNP
rs1355264316 907 dbSNP
rs1485478084 908 dbSNP
rs567915175 913 dbSNP
rs1374867086 915 dbSNP
rs1037107508 917 dbSNP
rs1417293864 918 dbSNP
rs529388897 918 dbSNP
rs549760990 921 dbSNP
rs561890630 922 dbSNP
rs1355689723 923 dbSNP
rs183739521 925 dbSNP
rs887591740 925 dbSNP
rs1326522411 930 dbSNP
rs1408904732 935 dbSNP
rs1226050768 942 dbSNP
rs11538570 945 dbSNP
rs746084425 950 dbSNP
rs1416745935 952 dbSNP
rs1237081225 961 dbSNP
rs1281527651 962 dbSNP
rs937298262 967 dbSNP
rs1347522491 971 dbSNP
rs989967984 973 dbSNP
rs1209011200 974 dbSNP
rs1376186962 977 dbSNP
rs112218454 979 dbSNP
rs1447725532 983 dbSNP
rs1192525643 990 dbSNP
rs1240337887 991 dbSNP
rs1475307906 992 dbSNP
rs1256544263 1000 dbSNP
rs1185457418 1008 dbSNP
rs552333359 1009 dbSNP
rs1032469425 1015 dbSNP
rs978165954 1016 dbSNP
rs550900634 1017 dbSNP
rs761233663 1018 dbSNP
rs966729992 1023 dbSNP
rs1483904236 1029 dbSNP
rs1174142637 1036 dbSNP
rs1233451324 1037 dbSNP
rs1019608736 1046 dbSNP
rs1203692429 1047 dbSNP
rs1305864593 1049 dbSNP
rs1385186975 1053 dbSNP
rs980773582 1054 dbSNP
rs1315638370 1059 dbSNP
rs1008503400 1061 dbSNP
rs890015289 1062 dbSNP
rs1028916777 1067 dbSNP
rs530487067 1074 dbSNP
rs898656911 1076 dbSNP
rs1036775075 1085 dbSNP
rs1304729588 1087 dbSNP
rs939758428 1088 dbSNP
rs1334371868 1092 dbSNP
rs906898745 1094 dbSNP
rs189498545 1096 dbSNP
rs184662992 1105 dbSNP
rs1204728751 1110 dbSNP
rs957105376 1113 dbSNP
rs1032538123 1114 dbSNP
rs12761045 1124 dbSNP
rs758213060 1126 dbSNP
rs562729930 1127 dbSNP
rs979989109 1138 dbSNP
rs1194201707 1147 dbSNP
rs878877218 1149 dbSNP
rs79140810 1150 dbSNP
rs915793465 1151 dbSNP
rs1452645744 1163 dbSNP
rs1156377115 1164 dbSNP
rs368863086 1164 dbSNP
rs997189298 1179 dbSNP
rs1327239028 1180 dbSNP
rs901487354 1187 dbSNP
rs1015103243 1206 dbSNP
rs1004664884 1214 dbSNP
rs1054779957 1216 dbSNP
rs887506199 1219 dbSNP
rs1461650099 1225 dbSNP
rs1416787452 1226 dbSNP
rs1048927862 1267 dbSNP
rs935886020 1271 dbSNP
rs1001767570 1272 dbSNP
rs924428210 1276 dbSNP
rs1337121403 1278 dbSNP
rs748018108 1282 dbSNP
rs905795529 1293 dbSNP
rs558115305 1294 dbSNP
rs767465725 1294 dbSNP
rs778852449 1295 dbSNP
rs986764191 1296 dbSNP
rs1418227777 1304 dbSNP
rs1052849573 1306 dbSNP
rs546133009 1310 dbSNP
rs935450280 1314 dbSNP
rs572240245 1323 dbSNP
rs979657275 1333 dbSNP
rs1391593927 1336 dbSNP
rs780707061 1349 dbSNP
rs954442938 1353 dbSNP
rs1028613252 1364 dbSNP
rs199860739 1364 dbSNP
rs879434906 1376 dbSNP
rs564745765 1383 dbSNP
rs1397674092 1384 dbSNP
rs953488319 1386 dbSNP
rs139703406 1391 dbSNP
rs192915597 1408 dbSNP
rs868436163 1412 dbSNP
rs1292780386 1421 dbSNP
rs1332682706 1435 dbSNP
rs1229531248 1439 dbSNP
rs976305218 1442 dbSNP
rs1015693258 1445 dbSNP
rs568190179 1446 dbSNP
rs1259244778 1447 dbSNP
rs1003935502 1448 dbSNP
rs1186736383 1454 dbSNP
rs188485257 1456 dbSNP
rs1173240620 1462 dbSNP
rs1374141218 1463 dbSNP
rs1321686144 1486 dbSNP
rs1014616438 1490 dbSNP
rs1306585080 1496 dbSNP
rs1388381098 1501 dbSNP
rs2018198 1503 dbSNP
rs770176974 1506 dbSNP
rs56788336 1511 dbSNP
rs1012625105 1515 dbSNP
rs571041393 1517 dbSNP
rs1158821667 1521 dbSNP
rs1283227404 1523 dbSNP
rs1306827547 1523 dbSNP
rs1477497847 1525 dbSNP
rs1225091099 1531 dbSNP
rs1282240727 1538 dbSNP
rs1348245064 1540 dbSNP
rs780557490 1544 dbSNP
rs1254948880 1547 dbSNP
rs1375362467 1550 dbSNP
rs1200364283 1551 dbSNP
rs1433325297 1552 dbSNP
rs375180473 1557 dbSNP
rs1268639556 1560 dbSNP
rs1001325715 1565 dbSNP
rs1216573860 1568 dbSNP
rs1487489991 1571 dbSNP
rs1054409925 1578 dbSNP
rs776907634 1578 dbSNP
rs1288634214 1580 dbSNP
rs935898905 1587 dbSNP
rs905680522 1589 dbSNP
rs1217548578 1590 dbSNP
rs924457580 1595 dbSNP
rs1045636410 1598 dbSNP
rs1435711521 1605 dbSNP
rs528001799 1625 dbSNP
rs566678967 1626 dbSNP
rs548413376 1627 dbSNP
rs144193002 1638 dbSNP
rs563025614 1645 dbSNP
rs1160780507 1652 dbSNP
rs1054858 1655 dbSNP
rs891686375 1674 dbSNP
rs1361311182 1675 dbSNP
rs912610836 1679 dbSNP
rs987285707 1680 dbSNP
rs1158033387 1682 dbSNP
rs1052484188 1687 dbSNP
rs36013827 1687 dbSNP
rs954104789 1704 dbSNP
rs1305461514 1711 dbSNP
rs935319926 1716 dbSNP
rs568271661 1727 dbSNP
rs755618712 1731 dbSNP
rs1133529 1734 dbSNP
rs1276118305 1735 dbSNP
rs750083387 1736 dbSNP
rs1318376023 1742 dbSNP
rs1216010457 1743 dbSNP
rs1194153489 1744 dbSNP
rs184876174 1745 dbSNP
rs925395582 1750 dbSNP
rs1187290121 1752 dbSNP
rs11538573 1754 dbSNP
rs1133537 1755 dbSNP
rs886047187 1761 dbSNP
rs1133539 1766 dbSNP
rs1255436891 1768 dbSNP
rs1133541 1769 dbSNP
rs767133959 1772 dbSNP
rs1207150375 1777 dbSNP
rs761539395 1780 dbSNP
rs1133542 1793 dbSNP
rs1071674 1795 dbSNP
rs1423444363 1796 dbSNP
rs1133544 1805 dbSNP
rs974372633 1808 dbSNP
rs963262473 1809 dbSNP
rs1133548 1818 dbSNP
rs1344699024 1822 dbSNP
rs1260516939 1823 dbSNP
rs1015727218 1825 dbSNP
rs1291565943 1835 dbSNP
rs922125809 1842 dbSNP
rs1273366879 1847 dbSNP
rs532500193 1848 dbSNP
rs754586403 1849 dbSNP
rs752088228 1852 dbSNP
rs1341433825 1853 dbSNP
rs1439963470 1857 dbSNP
rs1398091636 1858 dbSNP
rs886047186 1860 dbSNP
rs1362154957 1863 dbSNP
rs1298583634 1873 dbSNP
rs774631216 1874 dbSNP
rs1375166764 1877 dbSNP
rs766940985 1878 dbSNP
rs1133556 1879 dbSNP
rs763581354 1880 dbSNP
rs1224003530 1884 dbSNP
rs1024043807 1887 dbSNP
rs370316277 1889 dbSNP
rs1013069901 1891 dbSNP
rs1214982151 1892 dbSNP
rs1265713044 1899 dbSNP
rs770856835 1903 dbSNP
rs908113380 1904 dbSNP
rs983146237 1906 dbSNP
rs750746764 1909 dbSNP
rs1202443894 1912 dbSNP
rs1345744183 1913 dbSNP
rs1257514292 1922 dbSNP
rs1216647425 1923 dbSNP
rs1342286765 1929 dbSNP
rs894165371 1936 dbSNP
rs1471329311 1940 dbSNP
rs1300548230 1941 dbSNP
rs1407529192 1944 dbSNP
rs1471676588 1945 dbSNP
rs1054505227 1947 dbSNP
rs1383578730 1947 dbSNP
rs951761867 1954 dbSNP
rs370383392 1957 dbSNP
rs1000131840 1961 dbSNP
rs546070519 1962 dbSNP
rs903069504 1963 dbSNP
rs1362296402 1968 dbSNP
rs1001211111 1975 dbSNP
rs1041574914 1978 dbSNP
rs192848708 2001 dbSNP
rs890285172 2002 dbSNP
rs1377025765 2004 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 51021.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' agGACCUACGUUUAaaau 5'
            | ||  ||||||    
Target 5' gcCCGG--GCAAAU---- 3'
4 - 15
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset GSM4903829
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_a
Location of target site NM_016065 | 3UTR | GGCAAAUUUUUGUAUUUUUAGUAGAGAUGGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903830
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_b
Location of target site NM_016065 | 3UTR | AAAUUUUUGUAUUUUUAGUAGAGAUGGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903831
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / 124TD_shELAVL3_a
Location of target site NM_016065 | 3UTR | GGCAAAUUUUUGUAUUUUUAGUAGAGAUGGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_016065 | 3UTR | AUCAUAGAUGGGAUCCUUCUGAGAAUACUGGAAUAGGGAAUUAGGACACCAAGCCAAUUCAGCUGUGAACCUUAUUCUUGUACUUUUCUUUCUUGCUGGUAAUUUUAUGGAGCAGGUUAAGAAGGCUGCUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_016065 | 3UTR | AUCAUAGAUGGGAUCCUUCUGAGAAUACUGGAAUAGGGAAUUAGGACACCAAGCCAAUUCAGCUGUGAACCUUAUUCUUGUACUUUUCUUUCUUGCUGGUAAUUUUAUGGAGCAGGUUAAGAAGGCUGCUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_016065 | 3UTR | UUCUGAGAAUACUGGAAUAGGGAAUUAGGACACCAAGCCAAUUCAGCUGUGAACCUUAUUCUUGUACUUUUCUUUCUUGCUGGUAAUUUUAUGGAGCAGGUUAAGAAGGCUGCUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_016065 | 3UTR | UAUCAUAGAUGGGAUCCUUCUGAGAAUACUGGAAUAGGGAAUUAGGACACCAAGCCAAUUCAGCUGUGAACCUUAUUCUUGUACUUUUCUUUCUUGCUGGUAAUUUUAUGGAGCAGGUUAAGAAGGCUGCUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_016065 | 3UTR | UGAGAAUACUGGAAUAGGGAAUUAGGACACCAAGCCAAUUCAGCUGUGAACCUUAUUCUUGUACUUUUCUUUCUUGCUGGUAAUUUUAUGGAGCAGGUUAAGAAGGCUGCUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 9 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_016065 | 3UTR | GAUGGGAUCCUUCUGAGAAUACUGGAAUAGGGAAUUAGGACACCAAGCCAAUUCAGCUGUGAACCUUAUUCUUGUACUUUUCUUUCUUGCUGGUAAUUUUAUGGAGCAGGUUAAGAAGGCUGCUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 10 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000372945.3 | 3UTR | ACCGCCCGGGCAAAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
280 hsa-miR-4282 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057628 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT060732 RPS3 ribosomal protein S3 2 2
MIRT063371 ETNK1 ethanolamine kinase 1 2 2
MIRT066257 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT070774 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT070871 EIF2S1 eukaryotic translation initiation factor 2 subunit alpha 2 4
MIRT078056 PCTP phosphatidylcholine transfer protein 2 2
MIRT078408 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT084059 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 2
MIRT093537 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 6
MIRT096072 SFXN1 sideroflexin 1 2 2
MIRT098316 REV3L REV3 like, DNA directed polymerase zeta catalytic subunit 2 2
MIRT100493 UHRF1BP1 UHRF1 binding protein 1 2 2
MIRT102254 HBP1 HMG-box transcription factor 1 2 4
MIRT105318 VPS37A VPS37A, ESCRT-I subunit 2 2
MIRT114143 MZT1 mitotic spindle organizing protein 1 2 4
MIRT114873 DICER1 dicer 1, ribonuclease III 2 2
MIRT134683 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT137640 RCOR1 REST corepressor 1 2 2
MIRT155449 CCNT2 cyclin T2 2 4
MIRT165656 DCTN4 dynactin subunit 4 2 2
MIRT177570 CSTF2T cleavage stimulation factor subunit 2 tau variant 2 4
MIRT188514 E2F7 E2F transcription factor 7 2 10
MIRT193019 TMOD3 tropomodulin 3 2 4
MIRT195823 GADD45A growth arrest and DNA damage inducible alpha 2 2
MIRT195885 DEPDC1 DEP domain containing 1 2 6
MIRT206029 NUP50 nucleoporin 50 2 6
MIRT212148 CLCN3 chloride voltage-gated channel 3 2 2
MIRT213999 DCP2 decapping mRNA 2 2 2
MIRT214650 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 2
MIRT221568 CBX3 chromobox 3 2 2
MIRT224544 ZNF623 zinc finger protein 623 2 2
MIRT227654 SET SET nuclear proto-oncogene 2 2
MIRT229992 CHIC1 cysteine rich hydrophobic domain 1 2 2
MIRT238968 QKI QKI, KH domain containing RNA binding 2 2
MIRT239825 ACTB actin beta 2 2
MIRT241084 ZXDA zinc finger, X-linked, duplicated A 2 4
MIRT244852 ZBTB5 zinc finger and BTB domain containing 5 2 2
MIRT264534 TARDBP TAR DNA binding protein 2 2
MIRT271438 SKI SKI proto-oncogene 2 2
MIRT271597 ENAH ENAH, actin regulator 2 2
MIRT294332 ZNF264 zinc finger protein 264 2 2
MIRT296341 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT301715 TEF TEF, PAR bZIP transcription factor 2 2
MIRT308549 ZNF654 zinc finger protein 654 2 2
MIRT313866 DEPDC1B DEP domain containing 1B 2 2
MIRT315529 MARCKS myristoylated alanine rich protein kinase C substrate 2 2
MIRT321066 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT343777 NUTF2 nuclear transport factor 2 2 2
MIRT359109 MAP1B microtubule associated protein 1B 2 2
MIRT397393 GOLGA3 golgin A3 2 4
MIRT400822 CPEB2 cytoplasmic polyadenylation element binding protein 2 2 2
MIRT442171 DSEL dermatan sulfate epimerase-like 2 2
MIRT442777 JAG1 jagged 1 2 2
MIRT442862 SCARF1 scavenger receptor class F member 1 2 4
MIRT442919 PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 2 2
MIRT444567 TRA2B transformer 2 beta homolog 2 2
MIRT444718 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 2
MIRT445018 RBMS3 RNA binding motif single stranded interacting protein 3 2 2
MIRT445853 LRRC1 leucine rich repeat containing 1 2 2
MIRT446242 HELZ helicase with zinc finger 2 2
MIRT446542 GOLGA8B golgin A8 family member B 2 2
MIRT446643 SPTY2D1 SPT2 chromatin protein domain containing 1 2 2
MIRT446948 ZMAT3 zinc finger matrin-type 3 2 4
MIRT447061 KCNAB1 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 2 2
MIRT447327 ZSCAN21 zinc finger and SCAN domain containing 21 2 2
MIRT447995 CDX1 caudal type homeobox 1 2 2
MIRT448543 RHEBP1 RHEB pseudogene 1 2 6
MIRT448752 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT448772 GOLGA8A golgin A8 family member A 2 2
MIRT449342 WDR26 WD repeat domain 26 2 2
MIRT450011 SLC16A6 solute carrier family 16 member 6 2 4
MIRT450229 PCNX pecanex homolog 1 2 2
MIRT450340 MRPL17 mitochondrial ribosomal protein L17 2 4
MIRT450381 MSI2 musashi RNA binding protein 2 2 2
MIRT450759 PGGT1B protein geranylgeranyltransferase type I subunit beta 2 2
MIRT450809 NRCAM neuronal cell adhesion molecule 2 2
MIRT450947 ATAD2 ATPase family, AAA domain containing 2 2 2
MIRT459095 CCPG1 cell cycle progression 1 2 2
MIRT462428 TWISTNB TWIST neighbor 2 2
MIRT465200 TROVE2 TROVE domain family member 2 2 4
MIRT467382 SON SON DNA binding protein 2 4
MIRT468546 SERP1 stress associated endoplasmic reticulum protein 1 2 2
MIRT471506 PDE4D phosphodiesterase 4D 2 2
MIRT471981 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT474478 KLHL11 kelch like family member 11 2 8
MIRT475011 KANSL1 KAT8 regulatory NSL complex subunit 1 2 8
MIRT480341 C5orf51 chromosome 5 open reading frame 51 2 2
MIRT482696 TEX9 testis expressed 9 2 6
MIRT483462 YTHDF1 YTH N6-methyladenosine RNA binding protein 1 2 6
MIRT485623 FAM217B family with sequence similarity 217 member B 2 2
MIRT485714 CASP16 caspase 16, pseudogene 2 8
MIRT486279 SEC23A Sec23 homolog A, coat complex II component 2 2
MIRT491000 PEBP1 phosphatidylethanolamine binding protein 1 2 4
MIRT492594 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT493365 KIF5B kinesin family member 5B 2 2
MIRT494316 CDKN1B cyclin dependent kinase inhibitor 1B 2 2
MIRT495208 EDN3 endothelin 3 2 2
MIRT497011 TCF15 transcription factor 15 2 2
MIRT498512 FRK fyn related Src family tyrosine kinase 2 2
MIRT498778 PARP15 poly(ADP-ribose) polymerase family member 15 2 2
MIRT501045 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 2 6
MIRT502939 CDC37L1 cell division cycle 37 like 1 2 8
MIRT504806 VHL von Hippel-Lindau tumor suppressor 2 6
MIRT505656 SHMT1 serine hydroxymethyltransferase 1 2 6
MIRT505964 RAB5C RAB5C, member RAS oncogene family 2 6
MIRT506322 OTUD4 OTU deubiquitinase 4 2 4
MIRT506803 KLHL15 kelch like family member 15 2 6
MIRT506917 KBTBD8 kelch repeat and BTB domain containing 8 2 4
MIRT507400 EMC7 ER membrane protein complex subunit 7 2 8
MIRT507471 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 6
MIRT508058 ATP13A3 ATPase 13A3 2 4
MIRT508135 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT509895 RPS23 ribosomal protein S23 2 4
MIRT510881 RAN RAN, member RAS oncogene family 2 8
MIRT513766 PEX5L peroxisomal biogenesis factor 5 like 2 4
MIRT516898 COPS8 COP9 signalosome subunit 8 2 2
MIRT518703 TIMD4 T-cell immunoglobulin and mucin domain containing 4 2 4
MIRT520429 TTPAL alpha tocopherol transfer protein like 2 6
MIRT521843 PNISR PNN interacting serine and arginine rich protein 2 4
MIRT522116 NUDT3 nudix hydrolase 3 2 4
MIRT525467 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT525583 MTRNR2L7 MT-RNR2-like 7 2 2
MIRT525906 BUB1 BUB1 mitotic checkpoint serine/threonine kinase 2 2
MIRT526072 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT526232 MTRNR2L5 MT-RNR2-like 5 2 4
MIRT526455 FAM71F2 family with sequence similarity 71 member F2 2 4
MIRT526515 POU5F1B POU class 5 homeobox 1B 2 2
MIRT528032 FEZ2 fasciculation and elongation protein zeta 2 2 2
MIRT528422 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT528995 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 4
MIRT529311 ATRNL1 attractin like 1 2 2
MIRT529376 SKP1 S-phase kinase associated protein 1 2 4
MIRT530015 SRRM1 serine and arginine repetitive matrix 1 2 2
MIRT530089 FMN2 formin 2 2 2
MIRT530942 ENPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 2 2
MIRT531229 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT533088 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT533299 USP46 ubiquitin specific peptidase 46 2 2
MIRT533318 UNKL unkempt family like zinc finger 2 2
MIRT533721 TMEM30A transmembrane protein 30A 2 2
MIRT534096 AZF1 azoospermia factor 1 2 2
MIRT534188 SLC7A11 solute carrier family 7 member 11 2 2
MIRT534493 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT536077 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT536242 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT537524 FAM104A family with sequence similarity 104 member A 2 2
MIRT538088 DGKH diacylglycerol kinase eta 2 2
MIRT538475 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT538853 BTG1 BTG anti-proliferation factor 1 2 4
MIRT539075 GDNF glial cell derived neurotrophic factor 2 2
MIRT539480 ACVR2B activin A receptor type 2B 2 4
MIRT540210 ARHGAP18 Rho GTPase activating protein 18 2 2
MIRT541940 TSPAN2 tetraspanin 2 2 2
MIRT543812 COCH cochlin 2 2
MIRT545120 PDZRN4 PDZ domain containing ring finger 4 2 2
MIRT545571 GIMAP4 GTPase, IMAP family member 4 2 2
MIRT545989 XKR4 XK related 4 2 2
MIRT547213 PANK3 pantothenate kinase 3 2 4
MIRT547740 KIAA1468 KIAA1468 2 2
MIRT548022 GRB2 growth factor receptor bound protein 2 2 4
MIRT548032 GOLIM4 golgi integral membrane protein 4 2 2
MIRT548102 GFPT1 glutamine--fructose-6-phosphate transaminase 1 2 4
MIRT548217 FKBP1A FK506 binding protein 1A 2 2
MIRT548588 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT548953 CDC27 cell division cycle 27 2 2
MIRT549072 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT550368 INCENP inner centromere protein 2 6
MIRT550546 MYZAP myocardial zonula adherens protein 2 2
MIRT551491 TMEM192 transmembrane protein 192 2 4
MIRT553078 UEVLD UEV and lactate/malate dehyrogenase domains 2 2
MIRT554104 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT555127 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT555477 POC1B-GALNT4 POC1B-GALNT4 readthrough 2 2
MIRT555978 NPTN neuroplastin 2 2
MIRT557011 HPRT1 hypoxanthine phosphoribosyltransferase 1 2 2
MIRT557706 GALNT4 polypeptide N-acetylgalactosaminyltransferase 4 2 2
MIRT558333 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT558488 DBN1 drebrin 1 2 2
MIRT559942 ZNF567 zinc finger protein 567 2 2
MIRT561127 ATP2B1 ATPase plasma membrane Ca2+ transporting 1 2 2
MIRT561791 PAWR pro-apoptotic WT1 regulator 2 2
MIRT562438 EEF2 eukaryotic translation elongation factor 2 2 2
MIRT563102 PABPC4L poly(A) binding protein cytoplasmic 4 like 2 2
MIRT563212 ZNF813 zinc finger protein 813 2 2
MIRT563426 KIF3A kinesin family member 3A 2 2
MIRT563473 SPIN4 spindlin family member 4 2 2
MIRT564015 HSPA4 heat shock protein family A (Hsp70) member 4 2 4
MIRT564117 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT564223 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT564503 CACNG1 calcium voltage-gated channel auxiliary subunit gamma 1 2 2
MIRT564515 DUSP3 dual specificity phosphatase 3 2 2
MIRT564811 ZBTB21 zinc finger and BTB domain containing 21 2 2
MIRT565265 TPD52 tumor protein D52 2 2
MIRT566012 RHOB ras homolog family member B 2 2
MIRT566216 PTMA prothymosin, alpha 2 2
MIRT566638 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT566821 MAPK8 mitogen-activated protein kinase 8 2 2
MIRT566948 LEPROT leptin receptor overlapping transcript 2 2
MIRT567290 HNRNPAB heterogeneous nuclear ribonucleoprotein A/B 2 2
MIRT567895 CSTF2 cleavage stimulation factor subunit 2 2 2
MIRT568731 MTRNR2L3 MT-RNR2-like 3 2 2
MIRT571263 ZNF239 zinc finger protein 239 2 2
MIRT572593 EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 2 2
MIRT573827 TGOLN2 trans-golgi network protein 2 2 2
MIRT576391 Fhl2 four and a half LIM domains 2 2 2
MIRT609901 SMS spermine synthase 2 2
MIRT613710 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 2
MIRT614406 ADAT1 adenosine deaminase, tRNA specific 1 2 2
MIRT615042 DCX doublecortin 2 2
MIRT617514 C5orf45 MRN complex interacting protein 2 2
MIRT619476 PRDM10 PR/SET domain 10 2 2
MIRT620349 TLN1 talin 1 2 2
MIRT620910 PLA2G7 phospholipase A2 group VII 2 2
MIRT622131 SP4 Sp4 transcription factor 2 2
MIRT622955 OTUD7B OTU deubiquitinase 7B 2 2
MIRT623351 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT623619 INTU inturned planar cell polarity protein 2 2
MIRT624409 CCDC171 coiled-coil domain containing 171 2 2
MIRT625171 CCS copper chaperone for superoxide dismutase 2 2
MIRT625685 RPP40 ribonuclease P/MRP subunit p40 2 2
MIRT625875 ALDH18A1 aldehyde dehydrogenase 18 family member A1 2 2
MIRT626002 FAM107A family with sequence similarity 107 member A 2 2
MIRT626872 HRH4 histamine receptor H4 2 4
MIRT628220 FKBP9 FK506 binding protein 9 2 2
MIRT628265 DIO2 iodothyronine deiodinase 2 2 2
MIRT628402 C8orf37 chromosome 8 open reading frame 37 2 2
MIRT630564 C3orf36 chromosome 3 open reading frame 36 2 4
MIRT631577 RASSF9 Ras association domain family member 9 2 2
MIRT635730 CCDC58 coiled-coil domain containing 58 2 2
MIRT636224 SLC8A1 solute carrier family 8 member A1 2 2
MIRT636613 CLIC5 chloride intracellular channel 5 2 2
MIRT638899 CDK9 cyclin dependent kinase 9 2 2
MIRT640167 ATXN7L1 ataxin 7 like 1 2 2
MIRT642070 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT643034 CHCHD7 coiled-coil-helix-coiled-coil-helix domain containing 7 2 2
MIRT644572 SPOP speckle type BTB/POZ protein 2 2
MIRT644954 IFNB1 interferon beta 1 2 2
MIRT645948 TTF2 transcription termination factor 2 2 2
MIRT646440 XRCC2 X-ray repair cross complementing 2 2 2
MIRT647896 EPN2 epsin 2 2 2
MIRT648276 ZNF582 zinc finger protein 582 2 2
MIRT649381 NEDD1 neural precursor cell expressed, developmentally down-regulated 1 2 2
MIRT650254 CD68 CD68 molecule 2 2
MIRT650333 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT651707 VMP1 vacuole membrane protein 1 2 2
MIRT651774 VASP vasodilator stimulated phosphoprotein 2 2
MIRT653144 SRPK2 SRSF protein kinase 2 2 2
MIRT654112 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT654161 RORB RAR related orphan receptor B 2 2
MIRT655716 MLF2 myeloid leukemia factor 2 2 2
MIRT657476 HDAC4 histone deacetylase 4 2 2
MIRT658095 FOXO1 forkhead box O1 2 2
MIRT658860 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT658988 DNAJA1 DnaJ heat shock protein family (Hsp40) member A1 2 2
MIRT660767 ALDH6A1 aldehyde dehydrogenase 6 family member A1 2 2
MIRT661622 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT661694 TFDP2 transcription factor Dp-2 2 2
MIRT662208 PLA2G4E phospholipase A2 group IVE 2 2
MIRT662443 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT664422 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT687505 NECAB1 N-terminal EF-hand calcium binding protein 1 2 2
MIRT689910 SOD2 superoxide dismutase 2 2 2
MIRT690781 PLA2G2C phospholipase A2 group IIC 2 2
MIRT698488 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT699685 SFMBT2 Scm like with four mbt domains 2 2 2
MIRT700926 PDS5A PDS5 cohesin associated factor A 2 2
MIRT702258 LMNB1 lamin B1 2 2
MIRT703166 GPR137C G protein-coupled receptor 137C 2 2
MIRT703242 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT704737 CENPQ centromere protein Q 2 2
MIRT707310 GLRX2 glutaredoxin 2 2 2
MIRT710021 KCNQ5 potassium voltage-gated channel subfamily Q member 5 2 2
MIRT712212 SCOC short coiled-coil protein 2 2
MIRT714742 SETBP1 SET binding protein 1 2 2
MIRT718268 ZNF749 zinc finger protein 749 2 2
MIRT720553 DYRK4 dual specificity tyrosine phosphorylation regulated kinase 4 2 2
MIRT722248 RBM41 RNA binding motif protein 41 2 2
MIRT723767 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT723977 KIAA0146 scaffolding protein involved in DNA repair 1 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4282 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4282 Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4282 Neoadjuvant chemotherapy sensitive tissue (breast cancer)

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