pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CD1D   
Synonyms CD1A, R3, R3G1
Description CD1d molecule
Transcript NM_001766   
Expression
Putative miRNA Targets on CD1D
3'UTR of CD1D
(miRNA target sites are highlighted)
>CD1D|NM_001766|3'UTR
   1 CTCGCCTTGCCACATCTGTGTCTCTGGAACCCAGGACCTCTGGACCTCAGGTTCCTAAGACTTCAGTCCTGGTCTGCTCA
  81 GGAATTGAAGATGTAAGGAATTGAAGATAGGAGAGATACCTTGAAAAAGTAGAGAACAGTCATGAGGCAGCTTTCATCAC
 161 ACCCTTTTAACATTTATCTAAAAGAATTTAAATTCTTTTTCAAAAATTACACTACAAGTTTATAAGCCCAAATGGCTCTG
 241 TGAAATCAGAAGTGCAAAGGTGTGCAAACTTGTATCTGAAGACCTACCAGGGACAAGCAGGTAAGAGCTGATGTGAGTGT
 321 GTGTGATGGGATCTGTAAGGAACTGGAACACACATGTCCTATCCAAAGGAATCAGCTGCAGCTGCTTGTTGTCAAGTATA
 401 AAGTCAGGACCTGGCTTGGCTTTAACCGTTTTTCAAGAAAACTGGAAATCTGGATTTTCAGCGAACATGCCTGATTTTAA
 481 AAGGTTGACTCAAGTTTTTACAAAATACTATGTGGGACACCTCAAATACATACCTACTGACTGATGACAAACCCAGGAGT
 561 TTGTGTGTCTTTTATAAAAAGTTTGCCCTGGATGTCATATTGGCAGTTGGAGGACACAGTTTCTATTGTAAATTTGGATT
 641 TACGACTGAAGAAGGACATTTTCTCTTTAAAAGAAAGTTAGGTTATAAGAAACAGAGGCGTCTCACATTTTTACTTGGTG
 721 TAATTAATAAACGAAGATAAATCATAGTGTATGTGTATTATGTTGAAAAAAACTACTCTGAGTAAGGATATTTCTCTCAA
 801 ATGGTCATCACTTTTTTTCCTTGGAGGAAGATTGTCATGAAGGCATCCCTTCCTTCCCAAAACGACAACGGCAACAACAA
 881 CAGTCTCCTTTACTTACAGCTATTAAAAGAGACAATGTAGGGAAAGGGCCAACACCACTTGGGCAAGCATGAGCTGCAGC
 961 GATGATGGTGATGGTAGCCCAGCCATGCTGTGTTCTTATCTTAGAGAGGACAGAGCAGGAAACTTACAGGGGTAGCAGAC
1041 CTTTCTGATGCCAAAGAAATAAGGAGGCCAAAATCATGTTTGCCTAGCTGGGAGGTAAATCTCTTGGCAGTCAGGGTCCC
1121 TGAACACCCAGAAAAAATAAGTGAGACTTAACGGTTGGAGAGTGTTTGCTTGAGAAAAGTAACATTTCACACTCTCTATA
1201 CTAGACTTGCACATATGAATTTAGGATGTGCGTGAAGATTCTGCTAGCTTCAACATATCCCAAAGCACTTGGATATGCCT
1281 ATAATCCAAGTGCTTTGGGAGGCTGAGATAGGAGGATTGTTTAAGGCCAGGCATTTGAAATCAGCCTGGGCAACATAGTG
1361 AGACCCTGTCTCTACAAAAAATTAAAAAACTAGCCACCCATGGTGGTGAGCGCCTGTAGTCCTAGCTACTCTGGAGGCTG
1441 AGGTGGGAGGATCCCTTGAGCCCATGAATTCCAGGTTAGTGTGAGCTGTGATTGTGTCACTACAGTGTAAGGATGACAGA
1521 GGGAGACCCTGTCTTAAAAAAAAATTATGCTAGCTTTTAAATCAATGGTTCCCAAATTGTAGTAACCTGACCAACAGCCT
1601 CAGCAGGACCTGGGAACTTGTTATAAATGCAAATTGTTTTGGGCCTCATCCTATACCCGCTGAATGAGAAACTCTGAGTC
1681 TGGAAGCAGGCTCAATAGTCAAGCCCCCTGGTGATTCTGATGCTTAGCTAAAGTTAGAGAACCACTGTTCTTAGACATTG
1761 TGCAATGTTATACAACAACTTCCTCAAAGTGCTAAGTGAAAAGGACATTGGCCTGGCGTTAGTCAGGGAAGGCGTCCTGG
1841 AGGGAGGGGAATTTGAAGCAGAGCTTTGAAAAACAAAGGCAGTGAGGTGAACCAGCAAGTGCACTGGCTGAGGGGACTGG
1921 AGTTCTAGCCTCTGAACCAGTTTCCTCCTGTGCCAAAGGAGGATAATAATTATCTATTATTGATTATCTCCTAGACTTGT
2001 GGAGTTCAAGTGTGTAATGCCTTAAAAGATGTGGAGGCTGTTGCTGTGTTTGGTACCACATTGCCCACCCTCACGTGGCG
2081 CTCTTCAGCTTAGGTTCCTCTAGCAGTGTCAAGTTTGTGAACCAACCCCACTGGCCTTCTGCATTCTGAGGGCACGTGTG
2161 TTAAAGTCTCTACTGATGTCCTTTTGGAAATGCCTCTGCATGAATTTATGGTAGCTCTGACTCATCTTTAAACAATTTTA
2241 ATTTATTTAGAAAATAAAGGCTTATCTCTCCAGGAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggUAGAAGGAAGUCGGAg 5'
            ||:|    ||||||| 
Target 5' gcATTTGAAATCAGCCTg 3'
1331 - 1348 144.00 -13.10
2
miRNA  3' gguagaaGGAAGUCGGAg 5'
                 :|||||||:| 
Target 5' gtggcgcTCTTCAGCTTa 3'
2075 - 2092 135.00 -13.60
3
miRNA  3' gguagaaggaaGUCGGAg 5'
                     |||||| 
Target 5' aacctgaccaaCAGCCTc 3'
1584 - 1601 120.00 -15.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN13479426 5 COSMIC
COSN30583025 6 COSMIC
COSN31575508 17 COSMIC
COSN30182840 26 COSMIC
COSN26969821 37 COSMIC
COSN26969823 39 COSMIC
COSN30177204 41 COSMIC
COSN30180773 43 COSMIC
COSN30535385 55 COSMIC
COSN1408122 61 COSMIC
COSN30466789 65 COSMIC
COSN8644634 65 COSMIC
COSN30533044 73 COSMIC
COSN31586945 82 COSMIC
COSN30529482 84 COSMIC
COSN30475121 98 COSMIC
COSN30459434 99 COSMIC
COSN30472407 114 COSMIC
COSN31557705 116 COSMIC
COSN30531337 119 COSMIC
COSN21793570 132 COSMIC
COSN13479430 144 COSMIC
COSN31600302 167 COSMIC
COSN30115782 191 COSMIC
COSN31542079 232 COSMIC
COSN29848685 243 COSMIC
COSN1408123 273 COSMIC
COSN23300757 439 COSMIC
COSN7179466 559 COSMIC
COSN7179467 644 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs750140219 3 dbSNP
rs859015 4 dbSNP
rs773045914 5 dbSNP
rs765869271 6 dbSNP
rs372611201 14 dbSNP
rs759408606 15 dbSNP
rs757957240 21 dbSNP
rs200879670 22 dbSNP
rs779745395 24 dbSNP
rs375495581 27 dbSNP
rs1176331509 30 dbSNP
rs755945449 31 dbSNP
rs746473013 41 dbSNP
rs777523422 47 dbSNP
rs1174183965 51 dbSNP
rs426336 57 dbSNP
rs1190255994 59 dbSNP
rs530518303 62 dbSNP
rs1466458700 78 dbSNP
rs1343633369 80 dbSNP
rs1430358484 86 dbSNP
rs762579648 91 dbSNP
rs896338098 95 dbSNP
rs1332706849 101 dbSNP
rs763790512 102 dbSNP
rs550628002 106 dbSNP
rs1023447385 120 dbSNP
rs35388773 124 dbSNP
rs552893440 133 dbSNP
rs1365527962 135 dbSNP
rs1000581465 149 dbSNP
rs1438090502 156 dbSNP
rs1257248856 164 dbSNP
rs1392172642 176 dbSNP
rs993955162 182 dbSNP
rs1163323016 185 dbSNP
rs1461473046 191 dbSNP
rs1371244360 207 dbSNP
rs770936162 208 dbSNP
rs750835168 210 dbSNP
rs879779707 211 dbSNP
rs1005456889 212 dbSNP
rs1391043535 213 dbSNP
rs375672531 215 dbSNP
rs1449944632 217 dbSNP
rs1269642385 228 dbSNP
rs1293166556 237 dbSNP
rs956398538 248 dbSNP
rs1374718089 250 dbSNP
rs964319065 253 dbSNP
rs976579301 272 dbSNP
rs147873565 273 dbSNP
rs1225805395 274 dbSNP
rs1302239360 275 dbSNP
rs988824297 284 dbSNP
rs1332446941 286 dbSNP
rs1323701639 288 dbSNP
rs766901453 289 dbSNP
rs1309720391 311 dbSNP
rs956779412 312 dbSNP
rs1430184352 317 dbSNP
rs775395068 317 dbSNP
rs1394180841 318 dbSNP
rs1171521421 320 dbSNP
rs1477196152 325 dbSNP
rs1379571576 331 dbSNP
rs988212745 340 dbSNP
rs1199727384 347 dbSNP
rs1418540301 352 dbSNP
rs141694082 353 dbSNP
rs946694880 354 dbSNP
rs550073108 355 dbSNP
rs1190061610 381 dbSNP
rs952806996 386 dbSNP
rs763097252 395 dbSNP
rs1199071468 396 dbSNP
rs926858880 402 dbSNP
rs939600235 403 dbSNP
rs1275032834 413 dbSNP
rs764456662 416 dbSNP
rs908559305 428 dbSNP
rs568672070 429 dbSNP
rs898024091 452 dbSNP
rs11762 455 dbSNP
rs993906015 460 dbSNP
rs1470501170 463 dbSNP
rs754292376 464 dbSNP
rs917859395 467 dbSNP
rs1369233726 470 dbSNP
rs1173329662 472 dbSNP
rs1409931038 484 dbSNP
rs949241363 484 dbSNP
rs1044925684 485 dbSNP
rs905016969 486 dbSNP
rs535159276 487 dbSNP
rs888218273 488 dbSNP
rs1178720610 492 dbSNP
rs1405591228 495 dbSNP
rs755096645 499 dbSNP
rs1000655043 502 dbSNP
rs1444437872 511 dbSNP
rs1418880571 512 dbSNP
rs1326640026 526 dbSNP
rs1269537371 538 dbSNP
rs1228449827 547 dbSNP
rs1354791441 558 dbSNP
rs1053516189 560 dbSNP
rs1174423142 563 dbSNP
rs1449984534 564 dbSNP
rs778788054 566 dbSNP
rs191188866 575 dbSNP
rs1009250148 580 dbSNP
rs1400401050 584 dbSNP
rs1432885871 592 dbSNP
rs1161513751 595 dbSNP
rs1019677752 600 dbSNP
rs1417799797 604 dbSNP
rs1161915525 608 dbSNP
rs1473981901 614 dbSNP
rs963956618 617 dbSNP
rs1192906442 618 dbSNP
rs998550320 620 dbSNP
rs997021652 628 dbSNP
rs1333645079 639 dbSNP
rs1028483554 644 dbSNP
rs1333467099 645 dbSNP
rs1287663985 648 dbSNP
rs1230022517 658 dbSNP
rs565329523 663 dbSNP
rs952880217 676 dbSNP
rs1269423997 683 dbSNP
rs1432593504 689 dbSNP
rs1363325211 694 dbSNP
rs984198280 700 dbSNP
rs182197783 701 dbSNP
rs961736364 703 dbSNP
rs557338212 708 dbSNP
rs1235491627 709 dbSNP
rs987952658 712 dbSNP
rs758601106 715 dbSNP
rs1303637970 716 dbSNP
rs1391659715 719 dbSNP
rs1188739904 720 dbSNP
rs968110262 723 dbSNP
rs112871117 733 dbSNP
rs949313652 734 dbSNP
rs192753052 746 dbSNP
rs1452146815 753 dbSNP
rs1045000256 764 dbSNP
rs1272153899 766 dbSNP
rs926468074 766 dbSNP
rs936478980 772 dbSNP
rs1300099037 776 dbSNP
rs1438308571 780 dbSNP
rs1229500982 787 dbSNP
rs1206465368 788 dbSNP
rs926654876 802 dbSNP
rs762331197 804 dbSNP
rs1291909978 813 dbSNP
rs1438666267 823 dbSNP
rs370288659 827 dbSNP
rs1307912360 833 dbSNP
rs1057149523 844 dbSNP
rs1428240394 846 dbSNP
rs573806789 851 dbSNP
rs892236070 854 dbSNP
rs1169604690 856 dbSNP
rs746834667 858 dbSNP
rs770804531 862 dbSNP
rs929438650 864 dbSNP
rs569925501 865 dbSNP
rs1192455449 868 dbSNP
rs1040724209 870 dbSNP
rs1049271727 871 dbSNP
rs900827488 880 dbSNP
rs997095744 882 dbSNP
rs1275164336 883 dbSNP
rs1209864135 898 dbSNP
rs888162852 906 dbSNP
rs941093398 908 dbSNP
rs542337996 916 dbSNP
rs1172062017 917 dbSNP
rs1039369398 926 dbSNP
rs1005693645 936 dbSNP
rs1288278607 944 dbSNP
rs1411747341 948 dbSNP
rs1352842309 949 dbSNP
rs1327366302 960 dbSNP
rs781293143 962 dbSNP
rs1400252824 964 dbSNP
rs1357092161 978 dbSNP
rs1177713011 979 dbSNP
rs1414546338 980 dbSNP
rs1406692622 984 dbSNP
rs1442037038 986 dbSNP
rs899525113 990 dbSNP
rs1473561453 994 dbSNP
rs1252409122 998 dbSNP
rs1186998027 999 dbSNP
rs1254501634 1001 dbSNP
rs998093108 1001 dbSNP
rs1212430409 1005 dbSNP
rs184594994 1013 dbSNP
rs1231695492 1015 dbSNP
rs572580113 1018 dbSNP
rs892395546 1028 dbSNP
rs1267638737 1033 dbSNP
rs1273892157 1037 dbSNP
rs1352894066 1046 dbSNP
rs961489891 1057 dbSNP
rs1339394471 1062 dbSNP
rs1377341262 1066 dbSNP
rs1304957190 1070 dbSNP
rs546172188 1077 dbSNP
rs1448376654 1078 dbSNP
rs993311116 1099 dbSNP
rs1024347035 1104 dbSNP
rs1458323246 1108 dbSNP
rs188278184 1108 dbSNP
rs1412651070 1111 dbSNP
rs531897145 1116 dbSNP
rs1163921491 1119 dbSNP
rs1270733722 1126 dbSNP
rs1009318539 1131 dbSNP
rs1258095318 1135 dbSNP
rs1022085169 1138 dbSNP
rs968100452 1139 dbSNP
rs970027663 1147 dbSNP
rs981296822 1153 dbSNP
rs422236 1154 dbSNP
rs961015927 1159 dbSNP
rs992193490 1169 dbSNP
rs1244785218 1171 dbSNP
rs1320430969 1178 dbSNP
rs1315335951 1179 dbSNP
rs1467303120 1194 dbSNP
rs1229217517 1195 dbSNP
rs769766041 1197 dbSNP
rs1436666587 1199 dbSNP
rs756527425 1203 dbSNP
rs984918183 1211 dbSNP
rs1292434487 1215 dbSNP
rs989333479 1217 dbSNP
rs1370083545 1228 dbSNP
rs913691020 1230 dbSNP
rs909420568 1232 dbSNP
rs562140777 1233 dbSNP
rs1466417836 1239 dbSNP
rs1166256774 1243 dbSNP
rs147056190 1254 dbSNP
rs547596250 1256 dbSNP
rs1039882416 1262 dbSNP
rs1041189910 1264 dbSNP
rs1341829329 1265 dbSNP
rs565392856 1270 dbSNP
rs899598121 1278 dbSNP
rs192083807 1282 dbSNP
rs867989190 1294 dbSNP
rs1365461661 1300 dbSNP
rs1300057186 1301 dbSNP
rs1322417416 1302 dbSNP
rs1050725880 1306 dbSNP
rs1326676508 1310 dbSNP
rs1392816392 1320 dbSNP
rs1293978567 1325 dbSNP
rs892343368 1326 dbSNP
rs1428872392 1327 dbSNP
rs1368546225 1332 dbSNP
rs1170238674 1334 dbSNP
rs1009476878 1338 dbSNP
rs1451612604 1340 dbSNP
rs1022075493 1341 dbSNP
rs1198288228 1347 dbSNP
rs1431463428 1355 dbSNP
rs1049361375 1357 dbSNP
rs1223794755 1366 dbSNP
rs1483014357 1367 dbSNP
rs1275800804 1375 dbSNP
rs1317217455 1376 dbSNP
rs1207717688 1380 dbSNP
rs1342467119 1382 dbSNP
rs551622465 1384 dbSNP
rs551053189 1399 dbSNP
rs903723931 1400 dbSNP
rs1301354586 1404 dbSNP
rs768232524 1407 dbSNP
rs569665603 1412 dbSNP
rs1015794963 1413 dbSNP
rs1397510405 1417 dbSNP
rs897310886 1419 dbSNP
rs960837885 1423 dbSNP
rs773951332 1428 dbSNP
rs536923069 1430 dbSNP
rs1449008144 1435 dbSNP
rs950943036 1438 dbSNP
rs1191078048 1439 dbSNP
rs1250214621 1441 dbSNP
rs1024798775 1448 dbSNP
rs1262656861 1459 dbSNP
rs1475583085 1461 dbSNP
rs761048377 1462 dbSNP
rs1438690747 1465 dbSNP
rs1255051914 1469 dbSNP
rs1198436829 1473 dbSNP
rs763835401 1474 dbSNP
rs985075437 1475 dbSNP
rs555677432 1477 dbSNP
rs1263273731 1489 dbSNP
rs1227211233 1494 dbSNP
rs980119090 1495 dbSNP
rs1290085686 1499 dbSNP
rs1410224949 1500 dbSNP
rs1339583938 1502 dbSNP
rs1331948189 1506 dbSNP
rs1032975771 1513 dbSNP
rs1416372418 1518 dbSNP
rs752041793 1518 dbSNP
rs138292157 1528 dbSNP
rs1457673713 1529 dbSNP
rs1159558291 1530 dbSNP
rs1385187183 1532 dbSNP
rs1456725380 1533 dbSNP
rs1410413231 1534 dbSNP
rs909360209 1536 dbSNP
rs957948862 1536 dbSNP
rs989796129 1536 dbSNP
rs149619286 1537 dbSNP
rs974951117 1543 dbSNP
rs74583018 1545 dbSNP
rs1339206885 1549 dbSNP
rs1185837065 1555 dbSNP
rs703113 1558 dbSNP
rs572544380 1560 dbSNP
rs552636167 1566 dbSNP
rs1207582194 1572 dbSNP
rs557844598 1573 dbSNP
rs913602298 1579 dbSNP
rs1397511125 1582 dbSNP
rs1261137142 1585 dbSNP
rs1353109488 1588 dbSNP
rs1246680305 1597 dbSNP
rs945281085 1606 dbSNP
rs184481525 1615 dbSNP
rs754345298 1619 dbSNP
rs1434466390 1621 dbSNP
rs1386627342 1628 dbSNP
rs903788685 1631 dbSNP
rs1322623439 1634 dbSNP
rs888102748 1646 dbSNP
rs1002420191 1647 dbSNP
rs1054976064 1648 dbSNP
rs1413665365 1654 dbSNP
rs1486015366 1657 dbSNP
rs941658443 1659 dbSNP
rs1385489025 1660 dbSNP
rs1187469783 1665 dbSNP
rs1037669793 1666 dbSNP
rs189267822 1667 dbSNP
rs1215858976 1672 dbSNP
rs896523627 1673 dbSNP
rs753396508 1675 dbSNP
rs1014851431 1677 dbSNP
rs562368675 1685 dbSNP
rs73014112 1690 dbSNP
rs1296587735 1694 dbSNP
rs765756771 1695 dbSNP
rs1001587959 1696 dbSNP
rs754473978 1699 dbSNP
rs1423786049 1701 dbSNP
rs950724372 1702 dbSNP
rs1431521100 1704 dbSNP
rs569279520 1706 dbSNP
rs1322084485 1709 dbSNP
rs1016495202 1712 dbSNP
rs1366654838 1715 dbSNP
rs957599428 1727 dbSNP
rs964997840 1731 dbSNP
rs143328387 1735 dbSNP
rs966629237 1738 dbSNP
rs1477382587 1762 dbSNP
rs1244910758 1763 dbSNP
rs559539404 1765 dbSNP
rs1200991971 1768 dbSNP
rs1156387840 1788 dbSNP
rs1273706116 1806 dbSNP
rs532846503 1818 dbSNP
rs923500439 1819 dbSNP
rs1275318825 1821 dbSNP
rs955290556 1822 dbSNP
rs922405832 1823 dbSNP
rs1366917578 1827 dbSNP
rs986541035 1834 dbSNP
rs1346675155 1835 dbSNP
rs913549899 1836 dbSNP
rs909575137 1840 dbSNP
rs941009391 1841 dbSNP
rs551478951 1846 dbSNP
rs372164816 1847 dbSNP
rs1036673397 1850 dbSNP
rs918853453 1855 dbSNP
rs925160155 1859 dbSNP
rs950291864 1865 dbSNP
rs1173795685 1869 dbSNP
rs1045940479 1874 dbSNP
rs937946157 1883 dbSNP
rs1055364350 1886 dbSNP
rs896354930 1889 dbSNP
rs1250933172 1892 dbSNP
rs1307427906 1900 dbSNP
rs1179773660 1901 dbSNP
rs530566992 1905 dbSNP
rs1047818749 1906 dbSNP
rs1234820789 1913 dbSNP
rs1205573330 1914 dbSNP
rs1001661391 1918 dbSNP
rs1225398635 1920 dbSNP
rs1324925601 1921 dbSNP
rs1288222718 1923 dbSNP
rs1408405587 1928 dbSNP
rs886536064 1939 dbSNP
rs1299085583 1943 dbSNP
rs1446894591 1948 dbSNP
rs3021483 1967 dbSNP
rs75936247 1968 dbSNP
rs867870116 1969 dbSNP
rs1308733865 1970 dbSNP
rs567519095 1972 dbSNP
rs1213071498 1974 dbSNP
rs965325311 1975 dbSNP
rs1469821894 1977 dbSNP
rs113245350 1983 dbSNP
rs3021485 1986 dbSNP
rs75277424 1987 dbSNP
rs1408514689 1989 dbSNP
rs1181048859 1991 dbSNP
rs554509306 2005 dbSNP
rs988959063 2011 dbSNP
rs1417663655 2015 dbSNP
rs3021486 2027 dbSNP
rs16839951 2028 dbSNP
rs745662182 2037 dbSNP
rs1205678542 2038 dbSNP
rs979029936 2039 dbSNP
rs1461783728 2042 dbSNP
rs539548861 2057 dbSNP
rs985204807 2062 dbSNP
rs909647157 2065 dbSNP
rs925012299 2066 dbSNP
rs1228060462 2068 dbSNP
rs1376558950 2070 dbSNP
rs1454478278 2074 dbSNP
rs1338221357 2075 dbSNP
rs558273953 2076 dbSNP
rs1387347721 2079 dbSNP
rs1174975359 2080 dbSNP
rs769669729 2081 dbSNP
rs1465123071 2083 dbSNP
rs1298637901 2088 dbSNP
rs1163833045 2094 dbSNP
rs1421789325 2104 dbSNP
rs1398571974 2107 dbSNP
rs1383619114 2108 dbSNP
rs1185586297 2109 dbSNP
rs1445465662 2111 dbSNP
rs1247540146 2114 dbSNP
rs1206883163 2126 dbSNP
rs1487151190 2126 dbSNP
rs560953749 2141 dbSNP
rs1261788086 2146 dbSNP
rs1221304077 2153 dbSNP
rs990781388 2154 dbSNP
rs780009414 2156 dbSNP
rs918226144 2157 dbSNP
rs867634689 2159 dbSNP
rs142205049 2160 dbSNP
rs1294828724 2161 dbSNP
rs1383362284 2162 dbSNP
rs1236841645 2163 dbSNP
rs949169701 2167 dbSNP
rs748779959 2168 dbSNP
rs146195167 2172 dbSNP
rs886483739 2182 dbSNP
rs555366422 2209 dbSNP
rs1311608703 2210 dbSNP
rs937481257 2211 dbSNP
rs1054601230 2216 dbSNP
rs942131604 2218 dbSNP
rs1253549531 2219 dbSNP
rs1456863113 2239 dbSNP
rs112708417 2242 dbSNP
rs1038096232 2243 dbSNP
rs893212158 2252 dbSNP
rs1010285959 2260 dbSNP
rs1042142737 2263 dbSNP
rs1468633267 2278 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 912.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gguagaaggaaGUCGGAg 5'
                     | |:|| 
Target 5' auagugagaccCUGUCUc 3'
9 - 26
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000368171.3 | 3UTR | UGGGCAACAUAGUGAGACCCUGUCUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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