miRTarBase - #MIRT529389


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pre-miRNA Information
pre-miRNA hsa-mir-4650-1   
Genomic Coordinates chr7: 67114322 - 67114397
Description Homo sapiens miR-4650-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-4650-2   
Genomic Coordinates chr7: 72697903 - 72697978
Description Homo sapiens miR-4650-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4650-5p
Sequence 15| UCAGGCCUCUUUCUACCUU |33
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1332063492 8 dbSNP
rs914649075 9 dbSNP
rs1452034829 10 dbSNP
rs1489220537 15 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol NSFL1C   
Synonyms P47, UBX1, UBXD10, UBXN2C, dJ776F14.1
Description NSFL1 cofactor
Transcript NM_016143   
Other Transcripts NM_018839   
Expression
Putative miRNA Targets on NSFL1C
3'UTR of NSFL1C
(miRNA target sites are highlighted)		 
>NSFL1C|NM_016143|3'UTR
   1 CCGCCCAGCCAGCTGCCTGGCCTCCCTCCTGTGTTTCCCATGGCCAGTGGCCATGCCCCATGGGGATCGCCCCTCCTGCC
  81 CCCTTGTGCACACCCAGCAGTCCAGTGCAACGTCTCCTCCATAGCTCTGGGTTCTTAGATCTTGGTTGGACGTTTGTTTT
 161 CTCCTTAGTTGCATTTCCTGGGTTTTTGTGATGATCAATGGACTTTAATGAAAAAAAAAATAAAAACAACCAAAAAAATT
 241 GAAGGAATATCACCAGCATGTTGTACGGAAACTCTCCCACTGAAGCAGGCTTTAATTGCTTTAAAATTATATTTATCTTG
 321 GGGCCTGTGGGAGGAAACTTCCTTCCATCTTCTCTGCATAAAAACTTGTGGCACACAATGCTTATTCACTAGTGTGTCCC
 401 ACCCGCCAGCCCCACAGATGACTGGAGGAAGGAGGGGAAATGTGTAGAAAGAGGCTTCGCCACCACTTGTTCCCACGAGA
 481 ATATGTCACTTGCCCAGATAAAACTGGGCGGCAGCCAGAGTTCCCTGAAGTGGGAAGTCAGAGCTCCATGCACACAGTGT
 561 CTTCAGAAGGTGAAAATAAATATTTCCCTGTGCTCCTTTTACTCAACCCCTGGGGTATCTAATCTTGCCAGGTCTTGGCC
 641 AGTTGAGATTCTGTTCCACCTGCCTGCCTGGCCCTTTCCTCCATTACCATCCAGACTGCTCGCCTCCTGGGGATTCTCAG
 721 GGGCTCCATTATGGCTTGATTTACTCCACGTGCAGAAGTCTTGAGTGGACCTAGGAGGTAGGTGGGATATTTTTTTTCAC
 801 TAGGATACAGCTCATGCCAACCCATCCTAAGTGAGTTCAGAATCAGGGTATCTTGCCCTATAAGATAAACAGTCAAAATG
 881 CCACCGAGCTGTTCACTAGTGATGTGTGGCAAATCAAATCAACTGTTGAAGAAGGGGTGAGTTTTCTGTGCTACAAGCAC
 961 CTGTCACTGTTGGTACTTGCAGGAGGCTTCTGCTGGGTATGTTTTGGAAGTGAGTGTCACTACTTGGCTTTGCTTAGCAG
1041 GTTCTGCTTCACACTTGTTCTTTGACCTGCTGACTTGTGACTTGCAGAAACATAGGCAGTAGTCCTAGCCTGGTAAAGAC
1121 CCTCCACCACCCCTATAAGTTTGATTGCTATGCAGGTTTGGGAGAGGAGGCCTATTGGGCTCTTGGATGGAACCCTTTCC
1201 CGTATTAAACAAACCAGAGACAGAATCAGTGCTGACTCAGGATCTCCTGGTTTGGAATCGTAATGTGCCTCAATCCTCTT
1281 TCCAAGCAGGCCTCACCAGTCTCTTTCTCTTTCCTGCTTCACCCCTGCAATGAGCCAAGAACCAACACTACATCCACCTA
1361 GAACTGCAGAAGGGCTTGTGGTTTCAACCAAGACCCATCCTGAGCAAGGGACTTGGCTTGGTGCTTTTGATCCCAAAGTT
1441 CCCACACCGGCAGTGGCCTGCTGGGGCAATGGCATCTGTCACGGTGTTTTCTCCAGCAGGTGGAGATTATGGAACCTACA
1521 TATGGGTCTGGAAAAACTGTACACTGTTGTCACCTTGACCATTAAAAACCAGAATGAGGACAATGGA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uucCAUCUUUCUCCGGAcu 5'
             ||||||||||||:|  
Target 5' tgtGTAGAAAGAGGCTTcg 3'
 441 - 459 144.00 -20.40
2 
miRNA  3' uuCCAUCUUUCUCCGGAcu 5'
            || || |:|||||||  
Target 5' ttGGGAG-AGGAGGCCTat 3'
 1158 - 1175 140.00 -16.30
3 
miRNA  3' uuccaucuuuCUCCGGACu 5'
                    |:|||||| 
Target 5' tatttatcttGGGGCCTGt 3'
 310 - 328 129.00 -13.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30467167 2 COSMIC
COSN30134815 3 COSMIC
COSN30458983 25 COSMIC
COSN30492627 51 COSMIC
COSN30478424 62 COSMIC
COSN30500294 69 COSMIC
COSN31499708 70 COSMIC
COSN30190098 78 COSMIC
COSN18743242 91 COSMIC
COSN30494769 97 COSMIC
COSN18743391 100 COSMIC
COSN9396035 111 COSMIC
COSN30497460 125 COSMIC
COSN27270749 210 COSMIC
COSN30001297 506 COSMIC
COSN26249610 574 COSMIC
COSN23350130 872 COSMIC
COSN25784314 930 COSMIC
COSN16328260 998 COSMIC
COSN1865216 1007 COSMIC
COSN32065251 1027 COSMIC
COSN17076271 1277 COSMIC
COSN32064959 1369 COSMIC
COSN31961815 1483 COSMIC
COSN15436987 1511 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs746799852 2 dbSNP
rs1359186815 3 dbSNP
rs1169195227 5 dbSNP
rs1428347813 10 dbSNP
rs1277519659 15 dbSNP
rs372893417 17 dbSNP
rs1228352673 19 dbSNP
rs758353232 21 dbSNP
rs1372029657 22 dbSNP
rs1444333646 24 dbSNP
rs752599735 27 dbSNP
rs1183775099 28 dbSNP
rs1483712390 29 dbSNP
rs1292767298 31 dbSNP
rs367632040 40 dbSNP
rs1037200835 43 dbSNP
rs1202568139 44 dbSNP
rs1339968824 47 dbSNP
rs745591457 54 dbSNP
rs151293535 60 dbSNP
rs1483640630 65 dbSNP
rs1204304358 69 dbSNP
rs142406814 74 dbSNP
rs1423074274 79 dbSNP
rs890763739 82 dbSNP
rs6110021 83 dbSNP
rs953819545 86 dbSNP
rs1169873103 87 dbSNP
rs6891 91 dbSNP
rs977038723 93 dbSNP
rs1363605789 94 dbSNP
rs1360745686 95 dbSNP
rs966517699 97 dbSNP
rs1316000717 103 dbSNP
rs1382236285 105 dbSNP
rs1299866010 110 dbSNP
rs945758345 111 dbSNP
rs892919387 112 dbSNP
rs1271486455 116 dbSNP
rs1010683900 120 dbSNP
rs1054287345 121 dbSNP
rs937210556 125 dbSNP
rs186535074 126 dbSNP
rs371776668 128 dbSNP
rs957476851 141 dbSNP
rs770480323 144 dbSNP
rs1190079829 146 dbSNP
rs1203576899 149 dbSNP
rs981737153 151 dbSNP
rs529816701 152 dbSNP
rs1166160662 168 dbSNP
rs907864113 175 dbSNP
rs565469528 182 dbSNP
rs1033490943 188 dbSNP
rs1225148808 196 dbSNP
rs1001558835 197 dbSNP
rs779234356 198 dbSNP
rs905826150 209 dbSNP
rs1237771501 210 dbSNP
rs1384708644 211 dbSNP
rs1024563064 217 dbSNP
rs1014555335 221 dbSNP
rs1451739264 221 dbSNP
rs3215612 221 dbSNP
rs1224528815 222 dbSNP
rs1262958963 224 dbSNP
rs1357527843 231 dbSNP
rs1210275121 240 dbSNP
rs1320310454 245 dbSNP
rs1401333039 247 dbSNP
rs952123119 255 dbSNP
rs1261993113 256 dbSNP
rs1445921714 260 dbSNP
rs897404532 261 dbSNP
rs1248407894 263 dbSNP
rs149208204 265 dbSNP
rs1037230281 266 dbSNP
rs965198338 267 dbSNP
rs888221239 274 dbSNP
rs1161735224 275 dbSNP
rs1385854539 277 dbSNP
rs965205960 278 dbSNP
rs532024952 287 dbSNP
rs1333361123 290 dbSNP
rs1386190466 295 dbSNP
rs1049913205 296 dbSNP
rs1283192705 302 dbSNP
rs371913911 309 dbSNP
rs932341595 315 dbSNP
rs1260960836 316 dbSNP
rs1349444661 321 dbSNP
rs1183523719 323 dbSNP
rs146633910 327 dbSNP
rs1490363857 328 dbSNP
rs1235268194 330 dbSNP
rs976441553 332 dbSNP
rs1266678737 334 dbSNP
rs902789394 335 dbSNP
rs1473452636 340 dbSNP
rs1019948506 341 dbSNP
rs1364619438 345 dbSNP
rs1009938874 351 dbSNP
rs945326879 353 dbSNP
rs892888755 354 dbSNP
rs913804938 363 dbSNP
rs1447073019 364 dbSNP
rs1393048047 365 dbSNP
rs755520473 368 dbSNP
rs1364190614 369 dbSNP
rs957840601 369 dbSNP
rs1308109111 374 dbSNP
rs1412092147 374 dbSNP
rs1335516351 377 dbSNP
rs1033105558 381 dbSNP
rs1285576265 382 dbSNP
rs1054574147 385 dbSNP
rs749545591 392 dbSNP
rs905669483 396 dbSNP
rs1021085726 397 dbSNP
rs987775739 401 dbSNP
rs1289515445 404 dbSNP
rs970166321 405 dbSNP
rs1045593819 407 dbSNP
rs1024762270 408 dbSNP
rs1417070711 413 dbSNP
rs1180016518 418 dbSNP
rs772386738 423 dbSNP
rs1245175814 424 dbSNP
rs949958647 426 dbSNP
rs1162956172 428 dbSNP
rs543367679 437 dbSNP
rs1432217218 440 dbSNP
rs1380527340 446 dbSNP
rs780533458 451 dbSNP
rs531127697 455 dbSNP
rs1335784637 456 dbSNP
rs983416272 459 dbSNP
rs1244625739 470 dbSNP
rs1312228116 473 dbSNP
rs563983357 475 dbSNP
rs920616789 476 dbSNP
rs542472913 477 dbSNP
rs1250691048 482 dbSNP
rs3171292 485 dbSNP
rs199852286 487 dbSNP
rs1201911737 489 dbSNP
rs1245224061 493 dbSNP
rs1005736706 495 dbSNP
rs964840135 496 dbSNP
rs1183194716 501 dbSNP
rs1426718518 502 dbSNP
rs1366620362 503 dbSNP
rs181844185 504 dbSNP
rs1019511077 508 dbSNP
rs987664893 509 dbSNP
rs966943116 510 dbSNP
rs1187597944 512 dbSNP
rs569225048 517 dbSNP
rs900911917 524 dbSNP
rs750722504 525 dbSNP
rs956992302 536 dbSNP
rs13063 546 dbSNP
rs1001674235 550 dbSNP
rs190902224 552 dbSNP
rs751714535 557 dbSNP
rs558694787 568 dbSNP
rs566938461 570 dbSNP
rs1305649668 574 dbSNP
rs1235185468 575 dbSNP
rs989325700 576 dbSNP
rs1322536591 587 dbSNP
rs1014082873 590 dbSNP
rs886278498 593 dbSNP
rs1047606720 595 dbSNP
rs1292020544 601 dbSNP
rs1241523935 603 dbSNP
rs930572732 606 dbSNP
rs3088080 615 dbSNP
rs1039057394 618 dbSNP
rs1427212945 620 dbSNP
rs115495907 621 dbSNP
rs970577758 624 dbSNP
rs1275103921 627 dbSNP
rs1215029452 630 dbSNP
rs912014280 634 dbSNP
rs1339948986 637 dbSNP
rs1276344935 639 dbSNP
rs1346544229 641 dbSNP
rs1407022473 642 dbSNP
rs762955764 643 dbSNP
rs1287741571 645 dbSNP
rs1346445725 648 dbSNP
rs185358664 651 dbSNP
rs1302772785 658 dbSNP
rs1434831154 664 dbSNP
rs1356578582 666 dbSNP
rs752432406 671 dbSNP
rs144557683 678 dbSNP
rs961339388 684 dbSNP
rs368922093 685 dbSNP
rs1221388361 693 dbSNP
rs1261510061 694 dbSNP
rs373654071 697 dbSNP
rs1318906744 700 dbSNP
rs1216622842 701 dbSNP
rs1033079584 702 dbSNP
rs1484919869 707 dbSNP
rs1001244164 712 dbSNP
rs1270149071 716 dbSNP
rs1422317584 722 dbSNP
rs1197655963 730 dbSNP
rs547141034 731 dbSNP
rs1167976875 732 dbSNP
rs1409756914 734 dbSNP
rs970211265 735 dbSNP
rs1024840804 738 dbSNP
rs1419344175 740 dbSNP
rs1342987429 743 dbSNP
rs1481113702 743 dbSNP
rs1426001309 745 dbSNP
rs538359158 749 dbSNP
rs1024019676 750 dbSNP
rs1015859544 752 dbSNP
rs1013969747 754 dbSNP
rs1269243305 758 dbSNP
rs886247244 764 dbSNP
rs1005766153 769 dbSNP
rs1047569847 787 dbSNP
rs756131744 789 dbSNP
rs796937937 798 dbSNP
rs1224590763 807 dbSNP
rs997008307 808 dbSNP
rs994692602 813 dbSNP
rs1315205978 814 dbSNP
rs1224743588 822 dbSNP
rs899110275 825 dbSNP
rs6110018 827 dbSNP
rs1039436440 837 dbSNP
rs1487390959 837 dbSNP
rs1040743261 838 dbSNP
rs74741643 844 dbSNP
rs549536899 850 dbSNP
rs1470711371 852 dbSNP
rs531317319 857 dbSNP
rs892093111 860 dbSNP
rs3210915 861 dbSNP
rs936620137 867 dbSNP
rs945456067 869 dbSNP
rs914054781 876 dbSNP
rs776222785 881 dbSNP
rs1300859170 885 dbSNP
rs958524441 886 dbSNP
rs1045323717 894 dbSNP
rs1441200403 896 dbSNP
rs3171290 896 dbSNP
rs1248303785 902 dbSNP
rs1315870769 910 dbSNP
rs139072640 912 dbSNP
rs981434904 913 dbSNP
rs146193043 922 dbSNP
rs1438761547 930 dbSNP
rs1023941611 932 dbSNP
rs559993398 934 dbSNP
rs1230839729 935 dbSNP
rs1446479937 937 dbSNP
rs760118110 940 dbSNP
rs992511312 941 dbSNP
rs1183785306 956 dbSNP
rs1339260041 957 dbSNP
rs1442225545 959 dbSNP
rs541604019 961 dbSNP
rs1169644205 962 dbSNP
rs772780316 967 dbSNP
rs961369232 980 dbSNP
rs908581635 983 dbSNP
rs984129271 994 dbSNP
rs1454830372 995 dbSNP
rs953104486 997 dbSNP
rs1026089798 1006 dbSNP
rs1429311046 1006 dbSNP
rs1272441151 1007 dbSNP
rs1028552736 1010 dbSNP
rs994711945 1013 dbSNP
rs1256601068 1014 dbSNP
rs1326073548 1017 dbSNP
rs1409922320 1037 dbSNP
rs577288223 1038 dbSNP
rs1459594515 1042 dbSNP
rs965542010 1046 dbSNP
rs1457132377 1050 dbSNP
rs749862385 1057 dbSNP
rs1184685999 1063 dbSNP
rs1236341891 1065 dbSNP
rs1431243566 1065 dbSNP
rs1470124709 1068 dbSNP
rs1177428767 1080 dbSNP
rs1405552246 1084 dbSNP
rs1412856008 1089 dbSNP
rs1007897365 1093 dbSNP
rs1205418501 1104 dbSNP
rs1320319907 1108 dbSNP
rs763359937 1120 dbSNP
rs1461827791 1124 dbSNP
rs780259212 1124 dbSNP
rs1430699487 1127 dbSNP
rs565358519 1128 dbSNP
rs746266590 1132 dbSNP
rs1224432961 1133 dbSNP
rs1009311706 1135 dbSNP
rs1342389957 1137 dbSNP
rs781515800 1149 dbSNP
rs115906937 1150 dbSNP
rs1214450116 1170 dbSNP
rs533991711 1172 dbSNP
rs1053957695 1174 dbSNP
rs1375134231 1176 dbSNP
rs180695708 1179 dbSNP
rs940119330 1181 dbSNP
rs1453927173 1187 dbSNP
rs149683952 1192 dbSNP
rs926793966 1193 dbSNP
rs952716357 1196 dbSNP
rs981020760 1199 dbSNP
rs949690146 1200 dbSNP
rs921524867 1201 dbSNP
rs536142281 1202 dbSNP
rs1346643040 1214 dbSNP
rs753130269 1215 dbSNP
rs1279769962 1228 dbSNP
rs1349340397 1231 dbSNP
rs1213754165 1240 dbSNP
rs1490480927 1241 dbSNP
rs1438865142 1244 dbSNP
rs1378176322 1245 dbSNP
rs992480228 1246 dbSNP
rs751527901 1260 dbSNP
rs1019775012 1267 dbSNP
rs1184329850 1273 dbSNP
rs1364534559 1279 dbSNP
rs950461276 1279 dbSNP
rs1156875885 1280 dbSNP
rs1387134326 1287 dbSNP
rs1026058618 1290 dbSNP
rs1255356860 1295 dbSNP
rs1389114715 1301 dbSNP
rs567240665 1303 dbSNP
rs973563144 1304 dbSNP
rs1198840788 1306 dbSNP
rs1316584613 1307 dbSNP
rs1486886602 1307 dbSNP
rs1359504899 1308 dbSNP
rs879432183 1311 dbSNP
rs963208409 1311 dbSNP
rs1017868388 1318 dbSNP
rs1341215975 1322 dbSNP
rs1196098732 1324 dbSNP
rs1251541572 1325 dbSNP
rs1421015658 1327 dbSNP
rs1261592131 1330 dbSNP
rs754766188 1346 dbSNP
rs1245104956 1347 dbSNP
rs1351969873 1350 dbSNP
rs1007452597 1369 dbSNP
rs1317565411 1374 dbSNP
rs1445311481 1375 dbSNP
rs890406320 1387 dbSNP
rs1247375762 1395 dbSNP
rs1164701644 1406 dbSNP
rs777979050 1409 dbSNP
rs571966074 1412 dbSNP
rs1030329607 1417 dbSNP
rs1168815773 1427 dbSNP
rs1311172618 1429 dbSNP
rs1000951612 1430 dbSNP
rs1444184426 1434 dbSNP
rs1393860242 1442 dbSNP
rs904821496 1443 dbSNP
rs1023976424 1448 dbSNP
rs1009610977 1449 dbSNP
rs892475882 1456 dbSNP
rs1176768721 1459 dbSNP
rs76434628 1465 dbSNP
rs190043604 1469 dbSNP
rs758257612 1472 dbSNP
rs1315823788 1474 dbSNP
rs940486037 1479 dbSNP
rs905338441 1481 dbSNP
rs139525846 1482 dbSNP
rs1461841628 1483 dbSNP
rs949647132 1493 dbSNP
rs1048442319 1499 dbSNP
rs931311006 1510 dbSNP
rs150549584 1520 dbSNP
rs1423419862 1523 dbSNP
rs921316970 1525 dbSNP
rs975812510 1531 dbSNP
rs116233763 1532 dbSNP
rs912797656 1539 dbSNP
rs988287675 1541 dbSNP
rs1363426476 1542 dbSNP
rs752733236 1543 dbSNP
rs537485421 1548 dbSNP
rs1294765892 1552 dbSNP
rs1338151926 1553 dbSNP
rs1225062513 1560 dbSNP
rs992449312 1561 dbSNP
rs928934577 1571 dbSNP
rs918931252 1583 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 55968.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uuCCAUCUUUCUCCggacu 5'
            || :|||:||||     
Target 5' cuGGAGGAAGGAGGggaaa 3'
 		3 - 21
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000353088.2 | 3UTR | GACUGGAGGAAGGAGGGGAAAUGUGUAGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
62 hsa-miR-4650-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT064263 KIAA1804 mitogen-activated protein kinase kinase kinase 21 2 2
MIRT082508 CALM3 calmodulin 3 2 10
MIRT456061 SLC25A28 solute carrier family 25 member 28 2 2
MIRT463521 ZBTB7B zinc finger and BTB domain containing 7B 2 2
MIRT465449 TP53 tumor protein p53 2 2
MIRT469517 RBFOX2 RNA binding protein, fox-1 homolog 2 2 8
MIRT470967 PKM pyruvate kinase, muscle 2 2
MIRT471902 NUAK2 NUAK family kinase 2 2 2
MIRT479924 CBX5 chromobox 5 2 2
MIRT483045 C15orf52 chromosome 15 open reading frame 52 2 13
MIRT493184 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT496615 IKZF2 IKAROS family zinc finger 2 2 2
MIRT496980 DNAJC27 DnaJ heat shock protein family (Hsp40) member C27 2 2
MIRT522489 MFSD9 major facilitator superfamily domain containing 9 2 2
MIRT527859 SMOC1 SPARC related modular calcium binding 1 2 2
MIRT528540 TTC22 tetratricopeptide repeat domain 22 2 2
MIRT528860 PKP1 plakophilin 1 2 2
MIRT529389 NSFL1C NSFL1 cofactor 2 2
MIRT533523 TRIM13 tripartite motif containing 13 2 2
MIRT538056 DNAH3 dynein axonemal heavy chain 3 2 2
MIRT541480 ARF3 ADP ribosylation factor 3 2 6
MIRT576737 Wars tryptophanyl-tRNA synthetase 2 2
MIRT610462 SYNPO2L synaptopodin 2 like 2 4
MIRT614189 GGT7 gamma-glutamyltransferase 7 2 2
MIRT626341 PCSK7 proprotein convertase subtilisin/kexin type 7 2 2
MIRT627547 SNIP1 Smad nuclear interacting protein 1 2 2
MIRT628605 TMEM251 transmembrane protein 251 2 2
MIRT630827 YTHDC1 YTH domain containing 1 2 4
MIRT633419 TMEM120B transmembrane protein 120B 2 2
MIRT635354 CSMD2 CUB and Sushi multiple domains 2 2 2
MIRT636418 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT637031 SPTLC3 serine palmitoyltransferase long chain base subunit 3 2 2
MIRT638032 TMEM109 transmembrane protein 109 2 2
MIRT642847 ZBTB7C zinc finger and BTB domain containing 7C 2 2
MIRT644389 CD59 CD59 molecule (CD59 blood group) 2 2
MIRT645167 NOL9 nucleolar protein 9 2 2
MIRT645601 MRPS15 mitochondrial ribosomal protein S15 2 2
MIRT649169 IQSEC1 IQ motif and Sec7 domain 1 2 2
MIRT659166 DCTN5 dynactin subunit 5 2 4
MIRT660814 AHCY adenosylhomocysteinase 2 2
MIRT663640 HM13 histocompatibility minor 13 2 2
MIRT663848 TRIM72 tripartite motif containing 72 2 2
MIRT666535 RNF157 ring finger protein 157 2 2
MIRT667885 IP6K1 inositol hexakisphosphate kinase 1 2 2
MIRT671613 C6orf25 megakaryocyte and platelet inhibitory receptor G6b 2 2
MIRT673800 MALL mal, T-cell differentiation protein like 2 2
MIRT676281 ZNF260 zinc finger protein 260 2 2
MIRT687008 RPL35 ribosomal protein L35 2 2
MIRT689090 ACVR1 activin A receptor type 1 2 2
MIRT689259 WDR83OS WD repeat domain 83 opposite strand 2 2
MIRT697458 ZC3H4 zinc finger CCCH-type containing 4 2 2
MIRT699223 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT710222 JMJD4 jumonji domain containing 4 2 2
MIRT710935 ING5 inhibitor of growth family member 5 2 2
MIRT715830 ZNF598 zinc finger protein 598 2 2
MIRT716134 THOC5 THO complex 5 2 2
MIRT717518 HRNR hornerin 2 2
MIRT717918 LRRC15 leucine rich repeat containing 15 2 2
MIRT718307 XPOT exportin for tRNA 2 2
MIRT721350 LIF LIF, interleukin 6 family cytokine 2 2
MIRT724503 MSMO1 methylsterol monooxygenase 1 2 2
MIRT724993 FSTL3 follistatin like 3 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4650 Gemcitabine 60750 NSC613327 approved resistant Low Pancreatic Cancer cell line (SW1990)
hsa-miR-4650 Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (SW1990)
hsa-miR-4650-5p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (SW1990)
hsa-miR-4650-5p Tripterygium wilfordii Hook F resistant tissue

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