pre-miRNA Information
pre-miRNA hsa-mir-16-2   
Genomic Coordinates chr3: 160404745 - 160404825
Description Homo sapiens miR-16-2 stem-loop
Comment This entry represents a second putative hairpin precursor sequence for miR-16, located on chromosome 3 (see also MIR:MI0000070). The sequence was previously named mir-16-3 here and in references .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-16-2-3p
Sequence 53| CCAAUAUUACUGUGCUGCUUUA |74
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30477465 2 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs746992239 2 dbSNP
rs775368833 4 dbSNP
rs373202341 10 dbSNP
rs768780684 13 dbSNP
rs1341798864 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol EI24   
Synonyms EPG4, PIG8, TP53I8
Description EI24, autophagy associated transmembrane protein
Transcript NM_004879   
Expression
Putative miRNA Targets on EI24
3'UTR of EI24
(miRNA target sites are highlighted)
>EI24|NM_004879|3'UTR
   1 GTTGCCTGCCATCCAAAGGGGATGGGCGGGATTGGAAGAAGCTGTGGCAGCTCTTTTCCCTGTTCACCTCCCGCCTGCCA
  81 GGGAAGGCAGGACCCGCTCTGCCAAGGGCCCTCTGCGTATTCCCTTCTCTCTGAGGAATTGAAATTTTTGTCTCTGGTGC
 161 ACGTAAGGCAGAATGTTCCCTGACACCAGTGTGTGGATTTTTAACATCACCGTGAGTCTGAAAGGACCACAGGTTTTTCT
 241 GCAGCTATTTTCTAGCATTTGCCAGTCCCTGTGCCTGGACTGATTGGAACACTTTGTTTTTCTCCCTGTGCCATTTACCC
 321 TTCCACCTTTCCATCCTGCCTTCTACCACCCTTGGATGAATGGATTTTGTAATTCTAGCTGTTGTATTTTGTGAATTTGT
 401 TAATTTTGTTGTTTTTCTGTGAAACACATACATTGGATATGGGAGGTAAAGGAGTGTCCCAGTTGCTCCTGGTCACTCCC
 481 TTTATAGCCATTACTGTCTTGTTTCTTGTAACTCAGGTTAGGTTTTGGTCTCTCTTGCTCCACTGCAAAAAAAAAAAAAA
 561 AAAAAAAAAAAAAAAAAAAGCCTGAAGAGATGAGATAGGAGGAAAGACCTCACAGCCAGATCTGCTGGGTTTTGAGGAGT
 641 GATTTTCTTTCTTCCCCTTGAAGGGGAAAAAGCTATTTTCATTGGTACATTTAAAGTCCCCCAACTATGGGGAGGTACCA
 721 ATTCTGGACAAGTGCCACTACAACAACACTAAACCTGAACTTTTCAACTCCGTTGGTGGTGGGAGGCAGCGGGCAGAAAT
 801 TTACTGTTGGCCACTGCCAGGTCTATTTCATATTTCAAAGGAATATTGGGTGCTGCATATAGGAACTGAAGGGGTCAATG
 881 TATTAAACCTGTGATTGGTTGTTTTCCTGTCATTTTGAGAGACTAAATGTGGGGGGCAGATGTCAAAATACCTGTACAAT
 961 TTTAAAATGTCACAATTAAACATGAGCTGGTTTCCCACAAAGTGTC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' auuucgucGUGUCAUUAUAACc 5'
                  || || ||||||| 
Target 5' tcatatttCAAAGGAATATTGg 3'
828 - 849 154.00 -10.00
2
miRNA  3' auUUCGUCGUGUCAUUAUAAcc 5'
            | |:|  :||| |||:||  
Target 5' gcACGTAAGGCAG-AATGTTcc 3'
159 - 179 119.00 -7.17
3
miRNA  3' auUUCGUCG--UGUC-----AUUAUAACc 5'
            |:|||||  :|||     || |:||| 
Target 5' ggAGGCAGCGGGCAGAAATTTACTGTTGg 3'
782 - 810 118.00 -16.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN20077325 11 COSMIC
COSN30524516 15 COSMIC
COSN31587447 54 COSMIC
COSN31591464 117 COSMIC
COSN31605737 151 COSMIC
COSN31554971 212 COSMIC
COSN30538652 215 COSMIC
COSN20092443 239 COSMIC
COSN30544368 256 COSMIC
COSN31541247 285 COSMIC
COSN20108957 577 COSMIC
COSN31482067 593 COSMIC
COSN31542803 614 COSMIC
COSN4696738 686 COSMIC
COSN23013358 772 COSMIC
COSN20092444 787 COSMIC
COSN31515303 864 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs774814880 8 dbSNP
rs537440305 11 dbSNP
rs1415293189 13 dbSNP
rs1417006122 22 dbSNP
rs1157897028 23 dbSNP
rs1396871019 27 dbSNP
rs771441344 28 dbSNP
rs775228617 29 dbSNP
rs1247160990 35 dbSNP
rs1311627589 36 dbSNP
rs760187063 43 dbSNP
rs375171251 44 dbSNP
rs1314890547 45 dbSNP
rs753744418 46 dbSNP
rs370012892 50 dbSNP
rs761679321 51 dbSNP
rs1307889667 52 dbSNP
rs1317328014 68 dbSNP
rs765306942 69 dbSNP
rs1277891451 73 dbSNP
rs750348391 74 dbSNP
rs1040920605 82 dbSNP
rs1238760586 86 dbSNP
rs1479337786 88 dbSNP
rs561564548 94 dbSNP
rs1250745160 95 dbSNP
rs554280187 96 dbSNP
rs1220232363 97 dbSNP
rs1265234810 97 dbSNP
rs781078812 99 dbSNP
rs1265847877 106 dbSNP
rs1394830991 108 dbSNP
rs752972383 114 dbSNP
rs1394920582 116 dbSNP
rs780122373 117 dbSNP
rs1352853673 118 dbSNP
rs1053683045 119 dbSNP
rs1461508645 120 dbSNP
rs1218086984 123 dbSNP
rs574269694 126 dbSNP
rs1300561234 130 dbSNP
rs752040162 133 dbSNP
rs756353666 140 dbSNP
rs1459066271 154 dbSNP
rs1045091966 155 dbSNP
rs1301062889 163 dbSNP
rs375102205 164 dbSNP
rs1003701961 165 dbSNP
rs1450988358 185 dbSNP
rs1035897672 196 dbSNP
rs961512617 204 dbSNP
rs12417397 210 dbSNP
rs1256384809 212 dbSNP
rs188509727 213 dbSNP
rs553701433 215 dbSNP
rs952938880 225 dbSNP
rs576928991 229 dbSNP
rs1331043712 231 dbSNP
rs911177048 232 dbSNP
rs1388880368 235 dbSNP
rs545784063 239 dbSNP
rs12420149 240 dbSNP
rs1398625267 247 dbSNP
rs12420150 253 dbSNP
rs965522614 254 dbSNP
rs556495667 266 dbSNP
rs1465846751 269 dbSNP
rs781608251 283 dbSNP
rs576545953 285 dbSNP
rs1378129763 288 dbSNP
rs1404365430 290 dbSNP
rs1417057446 291 dbSNP
rs11538203 297 dbSNP
rs1198199349 312 dbSNP
rs7094 313 dbSNP
rs1342601693 314 dbSNP
rs1383058957 325 dbSNP
rs1294552418 331 dbSNP
rs769484765 338 dbSNP
rs12420174 344 dbSNP
rs769544996 345 dbSNP
rs989283742 362 dbSNP
rs374416673 375 dbSNP
rs1246750456 383 dbSNP
rs879068422 385 dbSNP
rs1309017525 392 dbSNP
rs1446993185 395 dbSNP
rs777530815 396 dbSNP
rs773509007 406 dbSNP
rs1277268609 415 dbSNP
rs1413396203 418 dbSNP
rs139180334 419 dbSNP
rs1287612278 427 dbSNP
rs1044776486 434 dbSNP
rs527804177 440 dbSNP
rs939144575 443 dbSNP
rs1185608935 447 dbSNP
rs1240253678 451 dbSNP
rs191258397 453 dbSNP
rs1441885802 455 dbSNP
rs1256993952 463 dbSNP
rs149952907 497 dbSNP
rs1036504634 500 dbSNP
rs533361350 502 dbSNP
rs1285674184 506 dbSNP
rs1241322126 513 dbSNP
rs994310891 518 dbSNP
rs1282041468 520 dbSNP
rs1446884890 521 dbSNP
rs1427055309 522 dbSNP
rs553159904 523 dbSNP
rs1335645055 528 dbSNP
rs1398004428 531 dbSNP
rs1359824139 538 dbSNP
rs1027078392 540 dbSNP
rs1044048 543 dbSNP
rs1421269271 544 dbSNP
rs1161642890 546 dbSNP
rs1364121590 546 dbSNP
rs1386344568 546 dbSNP
rs1411414222 546 dbSNP
rs1472606921 546 dbSNP
rs1167447195 547 dbSNP
rs1190159223 547 dbSNP
rs1196418613 547 dbSNP
rs1199579940 547 dbSNP
rs1216247013 547 dbSNP
rs1221296469 547 dbSNP
rs1227335974 547 dbSNP
rs1231071951 547 dbSNP
rs1245285445 547 dbSNP
rs1274645898 547 dbSNP
rs1285375747 547 dbSNP
rs1298701582 547 dbSNP
rs1316707350 547 dbSNP
rs1339344461 547 dbSNP
rs1347856287 547 dbSNP
rs1356625388 547 dbSNP
rs1401804967 547 dbSNP
rs1404917801 547 dbSNP
rs1414797139 547 dbSNP
rs1423056734 547 dbSNP
rs1452614312 547 dbSNP
rs1457222081 547 dbSNP
rs1476686579 547 dbSNP
rs1476869182 547 dbSNP
rs555090373 547 dbSNP
rs71045108 547 dbSNP
rs869028687 547 dbSNP
rs756420568 550 dbSNP
rs1424653611 551 dbSNP
rs1161749679 552 dbSNP
rs1362586401 553 dbSNP
rs1278307736 555 dbSNP
rs1454483471 556 dbSNP
rs888704164 557 dbSNP
rs1007542948 558 dbSNP
rs1288461079 558 dbSNP
rs1274254144 559 dbSNP
rs1018302860 560 dbSNP
rs1351455699 561 dbSNP
rs1397494245 561 dbSNP
rs1315483936 562 dbSNP
rs1399577775 562 dbSNP
rs1381927487 563 dbSNP
rs866188070 564 dbSNP
rs965738314 565 dbSNP
rs976754353 566 dbSNP
rs1031104215 568 dbSNP
rs1255324106 569 dbSNP
rs1317035122 570 dbSNP
rs1457054804 571 dbSNP
rs1258066667 572 dbSNP
rs1206002580 573 dbSNP
rs1214481069 576 dbSNP
rs1199913280 577 dbSNP
rs1219780863 577 dbSNP
rs775298318 577 dbSNP
rs1369411863 578 dbSNP
rs1258536422 579 dbSNP
rs1484030417 580 dbSNP
rs956741430 580 dbSNP
rs1163107979 581 dbSNP
rs989315074 584 dbSNP
rs1244208307 585 dbSNP
rs915069719 586 dbSNP
rs1444534035 588 dbSNP
rs1182346890 590 dbSNP
rs1175930732 595 dbSNP
rs948035422 596 dbSNP
rs1397213451 597 dbSNP
rs981077045 597 dbSNP
rs1439541814 599 dbSNP
rs1419709336 601 dbSNP
rs1158484102 603 dbSNP
rs1481972367 606 dbSNP
rs1343595049 607 dbSNP
rs533519881 619 dbSNP
rs1471111091 621 dbSNP
rs1210666275 623 dbSNP
rs1349978887 625 dbSNP
rs1337142630 642 dbSNP
rs551432192 643 dbSNP
rs939026433 645 dbSNP
rs570000716 646 dbSNP
rs1354217401 649 dbSNP
rs1307947168 652 dbSNP
rs1393396358 657 dbSNP
rs1035961455 661 dbSNP
rs1302352343 663 dbSNP
rs897580372 683 dbSNP
rs1377798290 691 dbSNP
rs563417743 701 dbSNP
rs531235748 704 dbSNP
rs1419461671 705 dbSNP
rs1311301142 706 dbSNP
rs1381362708 715 dbSNP
rs547806945 722 dbSNP
rs770504213 726 dbSNP
rs1374003138 738 dbSNP
rs1222636944 739 dbSNP
rs930359912 740 dbSNP
rs1048576282 754 dbSNP
rs1260913061 754 dbSNP
rs1313588300 760 dbSNP
rs567686755 762 dbSNP
rs1223793787 765 dbSNP
rs773733890 773 dbSNP
rs1461111201 779 dbSNP
rs888597366 791 dbSNP
rs1007174208 792 dbSNP
rs1241384104 793 dbSNP
rs1320150909 794 dbSNP
rs139643050 797 dbSNP
rs778567492 804 dbSNP
rs1233963172 811 dbSNP
rs533661155 819 dbSNP
rs1357503631 820 dbSNP
rs1296854344 826 dbSNP
rs1399967875 858 dbSNP
rs1361513554 861 dbSNP
rs1062795 868 dbSNP
rs1405967189 869 dbSNP
rs1018957584 870 dbSNP
rs1348936901 880 dbSNP
rs547422632 890 dbSNP
rs1475887644 891 dbSNP
rs1420886621 896 dbSNP
rs1192797048 901 dbSNP
rs1478116006 924 dbSNP
rs1263507122 926 dbSNP
rs1177483527 930 dbSNP
rs998597669 931 dbSNP
rs1030973726 936 dbSNP
rs1330640590 937 dbSNP
rs769599441 971 dbSNP
rs1354977648 974 dbSNP
rs956809417 987 dbSNP
rs989562010 992 dbSNP
rs1022160323 1001 dbSNP
rs570602726 1002 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 9538.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' auuucgucgugUCAUUAUAACc 5'
                     || ||||||| 
Target 5' -----------AGGAAUAUUGg 3'
1 - 11
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000343678.4 | 3UTR | AGGAAUAUUGGGUGCUGCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE42095 Differentiated embryonic stem cells 0.751 1.8e-5 0.762 1.2e-5 23 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.388 2.8e-2 -0.338 4.9e-2 25 Click to see details
GSE19350 CNS germ cell tumors 0.372 1.2e-1 0.350 1.3e-1 12 Click to see details
GSE19783 ER+ ER+ breast cancer -0.277 1.2e-1 -0.218 1.8e-1 20 Click to see details
GSE21032 Prostate cancer 0.12 1.4e-1 0.164 6.9e-2 83 Click to see details
GSE32688 Pancreatic cancer -0.163 1.9e-1 -0.241 9.2e-2 32 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.194 2.1e-1 0.402 3.9e-2 20 Click to see details
GSE28260 Renal cortex and medulla -0.227 2.3e-1 0.082 3.9e-1 13 Click to see details
GSE38226 Liver fibrosis 0.158 2.5e-1 -0.005 4.9e-1 21 Click to see details
GSE21687 Ependynoma primary tumors 0.082 2.6e-1 0.101 2.1e-1 64 Click to see details
GSE19536 Breast cancer -0.058 2.8e-1 -0.027 3.9e-1 100 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.106 3.1e-1 0.191 1.8e-1 25 Click to see details
GSE28544 Breast cancer -0.061 3.9e-1 -0.138 2.6e-1 24 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.085 4.1e-1 0.167 3.3e-1 9 Click to see details
GSE26953 Aortic valvular endothelial cells -0.024 4.6e-1 0.102 3.2e-1 24 Click to see details
GSE17498 Multiple myeloma 0.017 4.6e-1 0.185 1.3e-1 40 Click to see details
GSE19783 ER- ER- breast cancer -0.01 4.7e-1 0.020 4.3e-1 79 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
ESCA 0.567 0.03 0.573 0.03 11 Click to see details
LUAD -0.499 0.05 -0.336 0.14 12 Click to see details
PAAD -0.891 0.05 -0.800 0.1 4 Click to see details
STAD 0.271 0.07 0.299 0.05 31 Click to see details
LUSC -0.24 0.07 -0.289 0.04 38 Click to see details
KIRC -0.155 0.1 -0.209 0.04 68 Click to see details
PCPG 0.942 0.11 0.500 0.33 3 Click to see details
PRAD -0.128 0.19 -0.070 0.32 48 Click to see details
KIRP 0.13 0.24 0.071 0.35 32 Click to see details
BRCA -0.076 0.25 0.063 0.29 83 Click to see details
CHOL 0.251 0.26 -0.017 0.48 9 Click to see details
KICH 0.116 0.29 0.084 0.34 25 Click to see details
BLCA 0.136 0.3 0.146 0.28 18 Click to see details
LIHC -0.05 0.37 -0.156 0.14 49 Click to see details
CESC -0.395 0.37 -0.500 0.33 3 Click to see details
THCA -0.038 0.39 -0.007 0.48 59 Click to see details
UCEC -0.042 0.43 -0.084 0.37 19 Click to see details
HNSC -0.017 0.46 -0.004 0.49 42 Click to see details
HNSC -0.017 0.46 -0.004 0.49 42 Click to see details
HNSC -0.017 0.46 -0.004 0.49 42 Click to see details
75 hsa-miR-16-2-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT004488 RARB retinoic acid receptor beta 3 1
MIRT038707 NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 1 1
MIRT057208 PPIF peptidylprolyl isomerase F 2 4
MIRT058726 RSBN1 round spermatid basic protein 1 2 8
MIRT074502 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 2 4
MIRT081544 ZNF431 zinc finger protein 431 2 4
MIRT096893 ERBB2IP erbb2 interacting protein 2 2
MIRT105124 MYC MYC proto-oncogene, bHLH transcription factor 2 2
MIRT107898 PTAR1 protein prenyltransferase alpha subunit repeat containing 1 2 4
MIRT109432 KLHL15 kelch like family member 15 2 6
MIRT166742 PAPD7 poly(A) RNA polymerase D7, non-canonical 2 6
MIRT171257 YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma 2 2
MIRT192760 B2M beta-2-microglobulin 2 2
MIRT194905 RBBP6 RB binding protein 6, ubiquitin ligase 2 8
MIRT215599 SUB1 SUB1 homolog, transcriptional regulator 2 2
MIRT223632 ATP6V1C1 ATPase H+ transporting V1 subunit C1 2 4
MIRT241605 AMOTL1 angiomotin like 1 2 4
MIRT291174 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 2
MIRT444286 ABCG2 ATP binding cassette subfamily G member 2 (Junior blood group) 2 2
MIRT463285 ZFX zinc finger protein, X-linked 2 4
MIRT471759 NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit 2 8
MIRT479611 CDC25A cell division cycle 25A 2 2
MIRT481497 ARL6IP1 ADP ribosylation factor like GTPase 6 interacting protein 1 2 8
MIRT483117 SH3BP5 SH3 domain binding protein 5 2 2
MIRT502279 GRPEL2 GrpE like 2, mitochondrial 2 8
MIRT507838 CCNT1 cyclin T1 2 2
MIRT508179 MTRNR2L6 MT-RNR2-like 6 2 4
MIRT510576 UBE2D3 ubiquitin conjugating enzyme E2 D3 2 6
MIRT517853 RPS4X ribosomal protein S4, X-linked 2 4
MIRT521690 PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 2 8
MIRT525070 FRK fyn related Src family tyrosine kinase 2 2
MIRT527082 UBE2E3 ubiquitin conjugating enzyme E2 E3 2 2
MIRT529552 EI24 EI24, autophagy associated transmembrane protein 2 2
MIRT530426 SULT1B1 sulfotransferase family 1B member 1 2 2
MIRT533909 TBC1D15 TBC1 domain family member 15 2 2
MIRT536627 IPO7 importin 7 2 2
MIRT537647 ERGIC2 ERGIC and golgi 2 2 4
MIRT538512 CLCN3 chloride voltage-gated channel 3 2 2
MIRT539219 ANP32E acidic nuclear phosphoprotein 32 family member E 2 6
MIRT539348 AGO2 argonaute 2, RISC catalytic component 2 4
MIRT539954 CCT4 chaperonin containing TCP1 subunit 4 2 2
MIRT541208 HOXA10 homeobox A10 2 2
MIRT543216 TMEM117 transmembrane protein 117 2 2
MIRT543399 DROSHA drosha ribonuclease III 2 2
MIRT546648 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT546852 RAB1A RAB1A, member RAS oncogene family 2 2
MIRT549917 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT552998 USP46 ubiquitin specific peptidase 46 2 2
MIRT555254 PREPL prolyl endopeptidase-like 2 2
MIRT555956 NRIP1 nuclear receptor interacting protein 1 2 2
MIRT557095 HOXA9 homeobox A9 2 2
MIRT561396 TUBB2A tubulin beta 2A class IIa 2 2
MIRT561654 RNF219 ring finger protein 219 2 2
MIRT563101 PABPC4L poly(A) binding protein cytoplasmic 4 like 2 2
MIRT565979 RNF44 ring finger protein 44 2 2
MIRT572396 CCDC14 coiled-coil domain containing 14 2 2
MIRT574400 TM9SF3 transmembrane 9 superfamily member 3 2 2
MIRT607623 VSNL1 visinin like 1 2 2
MIRT610645 CTGF connective tissue growth factor 2 2
MIRT623379 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT624687 AR androgen receptor 2 2
MIRT632089 ALDH1A2 aldehyde dehydrogenase 1 family member A2 2 2
MIRT644216 CBS cystathionine-beta-synthase 2 2
MIRT647841 BID BH3 interacting domain death agonist 2 2
MIRT651649 WASF2 WAS protein family member 2 2 2
MIRT689064 AGMAT agmatinase 2 2
MIRT698150 TNPO1 transportin 1 2 2
MIRT700516 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
MIRT704081 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT705970 ACBD5 acyl-CoA binding domain containing 5 2 2
MIRT715694 COMMD3-BMI1 COMMD3-BMI1 readthrough 2 2
MIRT717184 BMI1 BMI1 proto-oncogene, polycomb ring finger 2 2
MIRT724607 AP3B1 adaptor related protein complex 3 beta 1 subunit 2 2
MIRT724854 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT725401 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-16-2 Diethylstilbestrol approved 448537 Microarray mammosphere-derived epithelial cells (MDEC) 19549897 2009 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-16-2-3p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (HCT-116)
hsa-miR-16-2-3p Mitoxantrone 4212 NSC279836 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-16-2-3p Cisplatin 5460033 NSC119875 approved sensitive Low Osteosarcoma cell line (HOS)
hsa-miR-16-2-3p Doxorubicin 31703 NSC123127 approved sensitive Low Osteosarcoma cell line (HOS)
hsa-miR-16-2-3p Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (H460)
hsa-miR-16-2-3p Bortezomib 387447 NSC681239 approved resistant Low Multiple Myeloma tissue
hsa-miR-16-2-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-16-2-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (cytosolic RNA)
hsa-miR-16-2-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CAL-27) (total RNA)
hsa-miR-16-2-3p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-miR-16-2-3p Doxorubicin 31703 NSC123127 approved sensitive cell line (BAS)
hsa-miR-16-2-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-16-2-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardB)
hsa-miR-16-2-3p Cisplatin 5460033 NSC119875 approved resistant cell line (HCT8)
hsa-miR-16-2-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (IGROV-1)
hsa-miR-16-2-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (MDA-231)
hsa-miR-16-2-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-16-2-3p Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)

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