miRTarBase - #MIRT529701


—
pre-miRNA Information
pre-miRNA hsa-mir-4301   
Genomic Coordinates chr11: 113450023 - 113450088
Description Homo sapiens miR-4301 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4301
Sequence 11| UCCCACUACUUCACUUGUGA |30
Evidence Experimental
Experiments SOLiD
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs184176277 2 dbSNP
rs1191324913 13 dbSNP
rs1369198005 15 dbSNP
rs1036973189 16 dbSNP
rs944900541 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MRPL30   
Synonyms L28MT, L30MT, MRP-L28, MRP-L30, MRPL28, MRPL28M, RPML28
Description mitochondrial ribosomal protein L30
Transcript NM_145212   
Expression
Putative miRNA Targets on MRPL30
3'UTR of MRPL30
(miRNA target sites are highlighted)		 
>MRPL30|NM_145212|3'UTR
   1 TGCCCCAGCAGCTTCCGATTGGAAAATGCAAATTGTTTTTATTTAAAGATGGTGAGAAAGTGTTTTCATTAAAATATGTT
  81 TTCAAAACCATTTTCAGGCCGGGCACGGTGGCTCACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCAGATCACCT
 161 GAGGTCAAGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCCCATCTCTACTGAAAATACAGAATTAGCCAGGCATG
 241 GTGGCACATGCCTGTAACCCAGCTACTCGGGAGGCTGAAGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAGTG
 321 AGCTGAGATGGTGCCACTGTACTCCAGCCTGGGTGATAGGATGAGACTCCATCTCAGGGGAAAAAAAAAAATTTTTTTTT
 401 CACTGACTAAACCTGCTGCAGCTCTCTTTTACTACAGACTTGGAGATTTTAGTTTAATTTGGTTTAATTCTCTGTCCTTT
 481 CCCTTTCACTGTTTCACTCCAAAACATGTAAGAATGGCAATGTTTGAACATCTGCGTTTGGGTCTACTGCCACCTTAGCA
 561 AGCCTCATTAACCATTTTATAAAAATTGCGTTAGTATTGTTGTTGTTGTTTTTGAGACAGGGTCTTGCTCTGTCACCCAA
 641 GCTGGAATACAGTGGCATGATTTCAGTTCACTGCAGCCTCGACCTCCCAGGCTCAAGTGATCCTCCCACCTCAGCCTCCA
 721 GAGTAGCTAGGACTACAGGCAGTGTGCCACCACATCCAGCTAATTTTTTAAAGTTTTTTCATAGAGACAGGGACTCACTA
 801 TGTTGTCCAAGCTGGTCTCAAACTCCTGGGTTCAAGCCATCCTCCCACCTCAGCCTCCCAAAATGCTGGGATTACAGGCA
 881 TGAGCCACTGTACCCAGCCAAAATTGTTTTCTTTTTTAAGTGAATTCAACAATTTCTGTGAGTGGCTCTTTGCATGAACA
 961 CTGTGCAAGGTGTTGGAGAAATCCAAAGCTGACCAAAACATGGTCCCCACCTTTTGGAGCTTACAGTCTGTTCTGGGGAA
1041 CAGAGATTCAGCCAAAGTCAAGAAACACTGGATGCCAGCTAGATTATCTGTTCTGTGCTTTGGTGTCTATAAGTACATAT
1121 GTGGATATGGGTTCATTTTATCCCTAAACTTAGTACCAAACCAGCATTTAATATCTAATTATAAATCTAATTTGGCCTAA
1201 ACTTTATTATTGCACACTGCCTGAACAAAACCTATTTGTCTCTATGTAAATTTTTTCCTCATGGAACAAGGGTGTGAAAT
1281 GAAAATATTTTAGGATTTATTCAAAAACAGACTATTCTGTTTTCAGCTTCAGAATTGTTCTTTGAATCCTAAGGAACCTC
1361 TGTCAACAGTTGAGGTTGCTGTTGAAAAGAAAGAAGAAGGAGGCGGAAATCTCTCAGGGAGAATTATTTCCTTTCTTTTC
1441 TATTTTAGATACCTGGAGGGGTGGGGAGAAGTAAGAATTGTAAGGGAGGTTCAGTAGTGGGGAATTCTGTGACAGCTGAT
1521 TGAAGATGATGATGAAGAACCTCTGCATTCTAGTTACCCTTTGCTTCCCTTCACCTCTTGTAAAATTTGGCTTGGCAACA
1601 ATGACATTGTCATGCTTATTGTCCCAATATCCATCCTGTCGTAGATCTTAATGTTTTTGATCGTTGCGTTAAAGTGGAAG
1681 TGCCACCCACAGTGAAACCAGATCCCATTAATAAATAAGCTTAAAGGCAACTGCAGTTTTAATTCCATAGTTATTGAATA
1761 TCCAGTGTGTGTAAGGCCTGGAGGGGAGCCAAAGGACACTAACTTCTAAGAGCTCCGTCTAGTTGGAGAGAAACCTGTGT
1841 GCCACAACATACAGTGTCCTTGCTTATGTGGGGTCGAAGACATCTGTGAAAATAAAAGCAGCCTCTGCTAATTTAGCGCC
1921 ATCTCTTTTACTGTGCTAATTTTTTTTTCTTTAGAGACAGGGTCTCACTCTGTCGCCCAGCCTGGAGGGCAGTGGTGTGA
2001 TCGTAGCTCACTATTACCTCCAACTCTTGGGCTCAAGTGATCCTCCCACCTCAGCCTCCTGAGCAGCTAGGACTACAGAT
2081 ACATGCCACCGCTCCCGGCTAGTATTTTTTAAAATTTTTTGTAGAGCCAAGTGTTGCTATGTTGTCCACACTGATCTGGA
2161 GCTTCTAATCTCAAATGATTCTCCTGCCTCAGCCTCCCAAAGTGCTGGGAATACAGGTGTGAGCCACCATACCTGGCCTT
2241 ACTGTACTAATATTAATATTGTGTAAATAGGGGAAAATACCATGGTTAATTTTTACTCAAACAGTAAGAAAGTTTGAGTA
2321 ACTAATTTTAATCTCAACAGCCCATAGCTAGAAGAGGGGATCTAAATGTTAAGTTGAATATTTAGAAATAAAAGTGTCTA
2401 CAAGAAGAAAAGTCTTTAGTGAAAATATGGGCATAGGCCAGCAGCATTAGCTTTCTATTGCTGCAGAACAAATTACCACA
2481 AACTTAGCTGCTTAAAACAACACACACTTATTGTCTCACAATGTTTGTGGGTCGGAAGTCTAGGCGTGGCTTAGCTGGGT
2561 AGTCTGTTTAGGATCTCAGTGCTGGAAAAACGTGTCTGGCCAGGTGCTCATTGTAGCTTTGACAGGGAAGGGATCTGCTC
2641 CCAAGCACTCTCAGGTTGTTGGCAGAATTTGTTTCCTTATGGCTGTAGGATTCATGGCAAGTTGCTTCTTCCAAAACCAG
2721 CATTGGAGACAGACTAGCAAGATGGGCACTACACTCTTAGATAATCAAATAAATGCAATCATGTGCCTCGTGTCACCTTT
2801 TTTGCATTCCATTCATTAAGAACAAGTTGCAGTTCCTACCTACACTCAAGGAAGGGAGGAATTACACAGAAGTGTGACCA
2881 CAGGAGGCAGGGCTCATGGAGGCCTCCTTAAAGTCCCCCAGCCAAACCTGAAAAGTCAATCCTGGACCTTATCATAGTGG
2961 CTGTATAGTTTAGAAGGTTTCTTCAGATTGGCATTCCTTTGCCTCATATCATCACTTCAAAACCCTATAAGGGTTTGTTC
3041 CTCGGTCTTGACTTTGTGTCTTTGAGGATTGCTTTGTTTAGTGTCACCTGCCTTCTTTCAGGAGGTTTTGCCTGACATCT
3121 GGTGGTGACCGTGGCCACCAAGTCAACCCAAACACTACCTTTAAGGACGACTGCAGTTCTCTTAGGGTCTCCTCAATCTA
3201 AAATTGTACCTCTTTCAGGCCAAACACCTATTTTCTTCATTTTTTTTTTCTCATAAGAATGCTAGCTAGTATGCCTATTA
3281 TCTAACTGGCACAGTTTCACCAAGGACAGTTTGGAACTACACAGGCCATTTTAGGGAGATTTTGACATGAACAAGATTGC
3361 TTCTTTGGGAGGTACCTTAAAATGAAAAGCAAAGAAACTTCCATGCGGAGATTGTCTTGTTTTTCTCAAAATGGGATAAT
3441 TTTGCTTAACATAAGTAGTATCCCTTCCTTCCTTTCCATACTTTGAGAATTAATAAGGACTAGCTTTTTGATCACACAGC
3521 TTGATAAAATTTTCAAGGGTCCAAATTACTGTCTAAACCATTTGCCACTCTTTGTGTATATTTGTCAAAATCTGCTTTTC
3601 TATATCAAAACTTTTCTCTCAAGACCTGAGGGAATTAATTAATAAGGAATCCTTGGAACACTGGAAATTCTAAAATAAGA
3681 GTCAGATACAAAACACTGGTCACTAAAATTCTTACCTTTATGTATTAGAATGGCAATCAATGAACAAACTGAAAATGTCT
3761 TTGGATATTATTTCTGTTTATTTTTTGCCTCAAAATTATTAAATGACATGAAATAAGTGCTCAAGAAGAAAAATAAACAA
3841 TTCTTCATTTCCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' agugUUCACUUCAUCACCCu 5'
              |:||  ||||||||| 
Target 5' agggAGGTTCAGTAGTGGGg 3'
 1483 - 1502 160.00 -19.00
2 
miRNA  3' aguguucacuucAUCACCcu 5'
                      ||||||  
Target 5' tggaccttatcaTAGTGGct 3'
 2943 - 2962 120.00 -5.90
3 
miRNA  3' agUGUUCACUUCAUCACCCu 5'
            |:|  ||:|| :||||| 
Target 5' agATACCTGGAGGGGTGGGg 3'
 1447 - 1466 118.00 -16.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30149320 16 COSMIC
COSN30186514 23 COSMIC
COSN23018109 53 COSMIC
COSN30192283 68 COSMIC
COSN26452454 69 COSMIC
COSN28862620 101 COSMIC
COSN16974235 102 COSMIC
COSN30110833 107 COSMIC
COSN30528452 113 COSMIC
COSN9394473 357 COSMIC
COSN22566593 393 COSMIC
COSN5963750 830 COSMIC
COSN27871141 944 COSMIC
COSN5963751 1359 COSMIC
COSN26808797 1427 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs765041327 3 dbSNP
rs1299243351 7 dbSNP
rs1350519977 12 dbSNP
rs1408708839 16 dbSNP
rs752289076 17 dbSNP
rs762278718 18 dbSNP
rs767755562 19 dbSNP
rs750754285 20 dbSNP
rs1252998945 25 dbSNP
rs141141547 27 dbSNP
rs568582414 27 dbSNP
rs1468325621 29 dbSNP
rs1310236567 31 dbSNP
rs1216122553 36 dbSNP
rs771380193 39 dbSNP
rs753925410 46 dbSNP
rs1482742183 49 dbSNP
rs1237766819 53 dbSNP
rs1333605649 55 dbSNP
rs1311083369 63 dbSNP
rs1447161536 69 dbSNP
rs1323749086 84 dbSNP
rs1349469397 86 dbSNP
rs1224181544 89 dbSNP
rs1046183803 91 dbSNP
rs1451805667 100 dbSNP
rs927693843 101 dbSNP
rs1159491632 102 dbSNP
rs1454071705 107 dbSNP
rs935026710 109 dbSNP
rs1209984765 137 dbSNP
rs1195939919 143 dbSNP
rs1052031841 144 dbSNP
rs547899147 147 dbSNP
rs186536814 148 dbSNP
rs539643937 149 dbSNP
rs1201434910 151 dbSNP
rs79600735 153 dbSNP
rs867788205 154 dbSNP
rs1043667532 160 dbSNP
rs1469796554 162 dbSNP
rs1127980 169 dbSNP
rs900671714 172 dbSNP
rs1346826244 174 dbSNP
rs556758663 175 dbSNP
rs570214158 176 dbSNP
rs996747636 194 dbSNP
rs1410537843 201 dbSNP
rs1317569094 203 dbSNP
rs1030451272 205 dbSNP
rs1433418257 208 dbSNP
rs954765854 221 dbSNP
rs797011884 242 dbSNP
rs1393558028 245 dbSNP
rs772518767 253 dbSNP
rs1478598737 254 dbSNP
rs1372941177 255 dbSNP
rs374221346 261 dbSNP
rs1436090961 264 dbSNP
rs1326258216 266 dbSNP
rs1004911203 267 dbSNP
rs1014954611 270 dbSNP
rs11542899 280 dbSNP
rs1485126388 288 dbSNP
rs1277818046 289 dbSNP
rs775650655 291 dbSNP
rs771501359 301 dbSNP
rs776796167 302 dbSNP
rs963347108 312 dbSNP
rs1225192139 313 dbSNP
rs1342336120 319 dbSNP
rs1414309760 334 dbSNP
rs1436227839 334 dbSNP
rs1281073413 337 dbSNP
rs1368439092 338 dbSNP
rs973344684 344 dbSNP
rs1415343488 364 dbSNP
rs1396254912 365 dbSNP
rs1166620707 370 dbSNP
rs1479069187 374 dbSNP
rs1233499608 376 dbSNP
rs1193737002 377 dbSNP
rs1474598766 378 dbSNP
rs760900926 380 dbSNP
rs1193911136 381 dbSNP
rs1211828899 381 dbSNP
rs1442748693 381 dbSNP
rs201869282 381 dbSNP
rs191218963 382 dbSNP
rs1278843260 384 dbSNP
rs982337895 387 dbSNP
rs1353656199 389 dbSNP
rs1335439287 392 dbSNP
rs554915939 392 dbSNP
rs879810502 392 dbSNP
rs867136258 393 dbSNP
rs1467565046 395 dbSNP
rs935099225 397 dbSNP
rs1052104749 399 dbSNP
rs1460424147 400 dbSNP
rs1411037359 401 dbSNP
rs1270953206 406 dbSNP
rs565945765 411 dbSNP
rs914916299 415 dbSNP
rs1182731656 424 dbSNP
rs1176544840 429 dbSNP
rs946347329 437 dbSNP
rs1043353513 441 dbSNP
rs1452919088 446 dbSNP
rs1193364846 450 dbSNP
rs1292075454 471 dbSNP
rs1229012396 474 dbSNP
rs1396265651 479 dbSNP
rs1278068361 482 dbSNP
rs1449387615 488 dbSNP
rs1378141969 490 dbSNP
rs571725153 500 dbSNP
rs540658134 507 dbSNP
rs1439303609 510 dbSNP
rs1352172496 512 dbSNP
rs183993800 518 dbSNP
rs80182354 521 dbSNP
rs776761154 522 dbSNP
rs1395056474 527 dbSNP
rs1480169235 528 dbSNP
rs1238590959 533 dbSNP
rs1052347323 536 dbSNP
rs890607131 537 dbSNP
rs1174146803 551 dbSNP
rs998361659 553 dbSNP
rs1392056141 555 dbSNP
rs368444654 559 dbSNP
rs1051152040 560 dbSNP
rs1303846634 563 dbSNP
rs1373174346 565 dbSNP
rs1242627802 573 dbSNP
rs1354739222 579 dbSNP
rs1225144450 581 dbSNP
rs1014975973 585 dbSNP
rs1268507569 590 dbSNP
rs899201940 591 dbSNP
rs755764982 593 dbSNP
rs1260281535 594 dbSNP
rs1421103274 595 dbSNP
rs562889533 597 dbSNP
rs150709466 618 dbSNP
rs1431294078 630 dbSNP
rs1427093910 644 dbSNP
rs1191725721 646 dbSNP
rs11542898 648 dbSNP
rs368775157 655 dbSNP
rs543241732 665 dbSNP
rs1261082391 674 dbSNP
rs1254019676 681 dbSNP
rs1488735057 702 dbSNP
rs1455973131 704 dbSNP
rs563504306 709 dbSNP
rs189033357 710 dbSNP
rs1214529219 714 dbSNP
rs1475431304 715 dbSNP
rs1169106880 716 dbSNP
rs1275728172 723 dbSNP
rs1401371553 724 dbSNP
rs139477820 727 dbSNP
rs1311899359 729 dbSNP
rs1464304315 731 dbSNP
rs1460581454 736 dbSNP
rs1360717369 738 dbSNP
rs1466351016 739 dbSNP
rs987853895 740 dbSNP
rs192979035 752 dbSNP
rs1195933063 755 dbSNP
rs1396317398 771 dbSNP
rs1380482795 774 dbSNP
rs1167182167 790 dbSNP
rs775822820 792 dbSNP
rs1204320919 794 dbSNP
rs1316580914 799 dbSNP
rs975472695 801 dbSNP
rs1340609793 806 dbSNP
rs1311521878 831 dbSNP
rs1393901434 850 dbSNP
rs1380953543 856 dbSNP
rs1303199076 860 dbSNP
rs932246268 879 dbSNP
rs1326921978 882 dbSNP
rs866223623 895 dbSNP
rs1172750940 896 dbSNP
rs1051996133 897 dbSNP
rs1417283095 901 dbSNP
rs1185560883 910 dbSNP
rs1425753974 931 dbSNP
rs1257193745 941 dbSNP
rs1280161261 943 dbSNP
rs1456720219 946 dbSNP
rs890637697 954 dbSNP
rs1240505906 955 dbSNP
rs1334810549 961 dbSNP
rs1264328119 965 dbSNP
rs940835297 966 dbSNP
rs765179208 988 dbSNP
rs1312997931 989 dbSNP
rs1445697236 994 dbSNP
rs773229100 1005 dbSNP
rs1374419082 1016 dbSNP
rs1333237876 1023 dbSNP
rs1447381883 1027 dbSNP
rs1161519201 1042 dbSNP
rs1389981581 1042 dbSNP
rs1459570095 1046 dbSNP
rs1369204286 1047 dbSNP
rs1158671815 1048 dbSNP
rs1438169012 1056 dbSNP
rs1232833187 1068 dbSNP
rs1179713197 1070 dbSNP
rs1468418436 1077 dbSNP
rs762728903 1077 dbSNP
rs1265963269 1079 dbSNP
rs1274209567 1080 dbSNP
rs766205811 1081 dbSNP
rs185111571 1087 dbSNP
rs1489185640 1088 dbSNP
rs1036481104 1116 dbSNP
rs751387079 1117 dbSNP
rs187190562 1121 dbSNP
rs547860363 1122 dbSNP
rs1351100734 1129 dbSNP
rs1261685748 1136 dbSNP
rs554414022 1147 dbSNP
rs1311148777 1157 dbSNP
rs1240668890 1166 dbSNP
rs372738846 1214 dbSNP
rs1195285903 1227 dbSNP
rs1321510531 1232 dbSNP
rs1388532666 1243 dbSNP
rs994869686 1247 dbSNP
rs1297775898 1249 dbSNP
rs1474678094 1254 dbSNP
rs1418076312 1255 dbSNP
rs1024074338 1256 dbSNP
rs1159626124 1262 dbSNP
rs1477908811 1275 dbSNP
rs1376373414 1285 dbSNP
rs905163117 1310 dbSNP
rs1451410421 1317 dbSNP
rs754743526 1325 dbSNP
rs533478485 1331 dbSNP
rs1003878509 1336 dbSNP
rs1287794215 1341 dbSNP
rs1344050663 1362 dbSNP
rs1015697484 1364 dbSNP
rs550060749 1376 dbSNP
rs956579302 1391 dbSNP
rs1277632726 1393 dbSNP
rs1398302955 1396 dbSNP
rs1362621429 1398 dbSNP
rs570252557 1405 dbSNP
rs1414219432 1418 dbSNP
rs145271666 1429 dbSNP
rs1234290660 1436 dbSNP
rs13798 1447 dbSNP
rs1466982612 1459 dbSNP
rs1353582914 1462 dbSNP
rs1308279787 1470 dbSNP
rs1423616247 1485 dbSNP
rs1192289775 1486 dbSNP
rs752302895 1505 dbSNP
rs1476555779 1521 dbSNP
rs1264808677 1527 dbSNP
rs768614284 1528 dbSNP
rs368330638 1547 dbSNP
rs1202026505 1551 dbSNP
rs191688012 1551 dbSNP
rs543443536 1559 dbSNP
rs1216815604 1560 dbSNP
rs1342480821 1565 dbSNP
rs1279037287 1570 dbSNP
rs975168162 1578 dbSNP
rs866535672 1582 dbSNP
rs1336540337 1593 dbSNP
rs1237392848 1597 dbSNP
rs933639511 1608 dbSNP
rs987759552 1609 dbSNP
rs1169178902 1611 dbSNP
rs1463562073 1617 dbSNP
rs1425188139 1620 dbSNP
rs1168032540 1628 dbSNP
rs1472253589 1639 dbSNP
rs1235447587 1641 dbSNP
rs1260490524 1642 dbSNP
rs1352120592 1645 dbSNP
rs866623764 1660 dbSNP
rs534315752 1663 dbSNP
rs1254791127 1668 dbSNP
rs1258773071 1669 dbSNP
rs1485036517 1670 dbSNP
rs557371270 1671 dbSNP
rs1188010127 1672 dbSNP
rs1286177828 1683 dbSNP
rs577622639 1707 dbSNP
rs1376654746 1716 dbSNP
rs1036512321 1717 dbSNP
rs1449612525 1717 dbSNP
rs1416926418 1730 dbSNP
rs537150360 1740 dbSNP
rs776856395 1745 dbSNP
rs556849187 1750 dbSNP
rs1364097049 1761 dbSNP
rs1411108354 1763 dbSNP
rs1164661674 1768 dbSNP
rs1444978129 1769 dbSNP
rs951239522 1770 dbSNP
rs987068222 1772 dbSNP
rs1003544060 1777 dbSNP
rs1459026984 1778 dbSNP
rs1233450088 1784 dbSNP
rs912631072 1801 dbSNP
rs1171624167 1805 dbSNP
rs555164275 1811 dbSNP
rs1229130829 1814 dbSNP
rs1353309884 1816 dbSNP
rs542874028 1817 dbSNP
rs746391751 1818 dbSNP
rs1378213978 1820 dbSNP
rs967880175 1826 dbSNP
rs997010738 1839 dbSNP
rs1313531930 1847 dbSNP
rs1028035868 1853 dbSNP
rs1325003071 1854 dbSNP
rs1381692590 1870 dbSNP
rs955248396 1871 dbSNP
rs1359572312 1872 dbSNP
rs758774651 1876 dbSNP
rs368246994 1877 dbSNP
rs1441315404 1880 dbSNP
rs1408547884 1884 dbSNP
rs986448897 1885 dbSNP
rs780458664 1900 dbSNP
rs936679609 1909 dbSNP
rs183860706 1914 dbSNP
rs1223383602 1918 dbSNP
rs962304824 1922 dbSNP
rs1052635961 1932 dbSNP
rs188429329 1933 dbSNP
rs892747639 1936 dbSNP
rs949560062 1939 dbSNP
rs1301141381 1940 dbSNP
rs1317923087 1940 dbSNP
rs747372901 1940 dbSNP
rs972279916 1944 dbSNP
rs920767500 1945 dbSNP
rs1405101680 1959 dbSNP
rs573218331 1963 dbSNP
rs930789394 1965 dbSNP
rs1295974876 1967 dbSNP
rs1421234359 1968 dbSNP
rs1046974118 1971 dbSNP
rs926720147 1971 dbSNP
rs939384244 1972 dbSNP
rs147643107 1973 dbSNP
rs1194821011 1975 dbSNP
rs1427255359 1984 dbSNP
rs1200154605 1993 dbSNP
rs1251005227 1996 dbSNP
rs1056372737 2000 dbSNP
rs1261243119 2003 dbSNP
rs542000351 2004 dbSNP
rs116528550 2012 dbSNP
rs1034102656 2014 dbSNP
rs1454644801 2024 dbSNP
rs898159633 2025 dbSNP
rs533240360 2028 dbSNP
rs1223527260 2036 dbSNP
rs995205395 2041 dbSNP
rs1176963695 2065 dbSNP
rs1339300259 2067 dbSNP
rs1275866616 2068 dbSNP
rs1043591094 2077 dbSNP
rs1362281881 2080 dbSNP
rs903689258 2083 dbSNP
rs550266507 2085 dbSNP
rs1025554856 2091 dbSNP
rs180785363 2092 dbSNP
rs986753573 2093 dbSNP
rs1019838909 2097 dbSNP
rs140493505 2098 dbSNP
rs975432236 2102 dbSNP
rs1172977286 2103 dbSNP
rs1429326629 2104 dbSNP
rs955131235 2105 dbSNP
rs764118343 2111 dbSNP
rs1484448568 2115 dbSNP
rs958025678 2121 dbSNP
rs1198601555 2128 dbSNP
rs201915665 2131 dbSNP
rs34119189 2131 dbSNP
rs386390715 2132 dbSNP
rs1203412451 2134 dbSNP
rs913920317 2140 dbSNP
rs776814052 2151 dbSNP
rs748275340 2152 dbSNP
rs1384767912 2153 dbSNP
rs949637401 2156 dbSNP
rs1337196956 2160 dbSNP
rs1251568121 2162 dbSNP
rs769918970 2163 dbSNP
rs1445929504 2167 dbSNP
rs1046648604 2168 dbSNP
rs926744841 2170 dbSNP
rs115534113 2177 dbSNP
rs960996853 2178 dbSNP
rs549210184 2182 dbSNP
rs185742971 2184 dbSNP
rs1368052981 2188 dbSNP
rs1055544679 2189 dbSNP
rs1425880121 2197 dbSNP
rs898277534 2200 dbSNP
rs1386215865 2203 dbSNP
rs1178462495 2205 dbSNP
rs920854004 2206 dbSNP
rs995154240 2217 dbSNP
rs534994509 2218 dbSNP
rs1480686666 2220 dbSNP
rs1427380446 2223 dbSNP
rs1242124342 2224 dbSNP
rs1361219677 2227 dbSNP
rs1315459178 2228 dbSNP
rs980950666 2229 dbSNP
rs926725192 2230 dbSNP
rs1309080886 2241 dbSNP
rs1391984296 2252 dbSNP
rs555386473 2254 dbSNP
rs1291897444 2259 dbSNP
rs1426857309 2259 dbSNP
rs1008530578 2264 dbSNP
rs1366490896 2266 dbSNP
rs763000830 2268 dbSNP
rs1158412784 2275 dbSNP
rs964219970 2279 dbSNP
rs996671524 2283 dbSNP
rs945341951 2285 dbSNP
rs1044076506 2286 dbSNP
rs149730987 2286 dbSNP
rs1032368826 2289 dbSNP
rs548751042 2295 dbSNP
rs903754147 2295 dbSNP
rs1424679096 2300 dbSNP
rs766221295 2301 dbSNP
rs1207616110 2306 dbSNP
rs866334560 2323 dbSNP
rs190603473 2340 dbSNP
rs1324311073 2343 dbSNP
rs1215556635 2351 dbSNP
rs1351259709 2355 dbSNP
rs1394136935 2358 dbSNP
rs1437838386 2359 dbSNP
rs564466779 2360 dbSNP
rs531600451 2373 dbSNP
rs1213528475 2374 dbSNP
rs1007987811 2379 dbSNP
rs1406914304 2396 dbSNP
rs1346312899 2398 dbSNP
rs1297833770 2402 dbSNP
rs77907101 2408 dbSNP
rs896863151 2413 dbSNP
rs926927920 2422 dbSNP
rs995162991 2427 dbSNP
rs6705630 2428 dbSNP
rs553216247 2430 dbSNP
rs952312392 2432 dbSNP
rs1481141444 2434 dbSNP
rs1269098046 2435 dbSNP
rs752431523 2438 dbSNP
rs1487125419 2441 dbSNP
rs76135824 2443 dbSNP
rs920779863 2451 dbSNP
rs931021230 2458 dbSNP
rs1033866903 2461 dbSNP
rs1240336453 2463 dbSNP
rs754801300 2476 dbSNP
rs1324407952 2477 dbSNP
rs992207180 2478 dbSNP
rs1398362101 2480 dbSNP
rs1046820302 2481 dbSNP
rs1319388447 2511 dbSNP
rs886737830 2512 dbSNP
rs1400624685 2514 dbSNP
rs1263914562 2515 dbSNP
rs1179241495 2522 dbSNP
rs1478935107 2525 dbSNP
rs1007935909 2531 dbSNP
rs145748719 2533 dbSNP
rs545345546 2534 dbSNP
rs1167317205 2535 dbSNP
rs1344003504 2539 dbSNP
rs1430633282 2546 dbSNP
rs1298279893 2547 dbSNP
rs1441645926 2548 dbSNP
rs62153763 2550 dbSNP
rs1253934838 2557 dbSNP
rs1205450471 2562 dbSNP
rs562020297 2567 dbSNP
rs186852477 2572 dbSNP
rs1412559655 2574 dbSNP
rs1257493110 2579 dbSNP
rs925249783 2580 dbSNP
rs1292247498 2582 dbSNP
rs1341656643 2586 dbSNP
rs1335052180 2590 dbSNP
rs996735506 2593 dbSNP
rs577956595 2601 dbSNP
rs932596982 2605 dbSNP
rs1339146671 2607 dbSNP
rs1453963759 2615 dbSNP
rs1032104795 2616 dbSNP
rs114800734 2618 dbSNP
rs763674387 2620 dbSNP
rs1168161026 2622 dbSNP
rs1036816325 2628 dbSNP
rs1021077897 2630 dbSNP
rs1185254384 2631 dbSNP
rs1489290656 2639 dbSNP
rs1185864581 2645 dbSNP
rs995604342 2648 dbSNP
rs1202451761 2651 dbSNP
rs971128137 2653 dbSNP
rs1209438178 2655 dbSNP
rs982163497 2656 dbSNP
rs1034330242 2666 dbSNP
rs1317601078 2676 dbSNP
rs1247259739 2682 dbSNP
rs1257135802 2687 dbSNP
rs1473240062 2690 dbSNP
rs959588661 2692 dbSNP
rs563799817 2696 dbSNP
rs905498005 2704 dbSNP
rs2707630 2706 dbSNP
rs1002468559 2717 dbSNP
rs529442099 2719 dbSNP
rs973664950 2724 dbSNP
rs796947544 2745 dbSNP
rs1159726985 2747 dbSNP
rs797020038 2779 dbSNP
rs1000484307 2782 dbSNP
rs1432371299 2784 dbSNP
rs960902624 2790 dbSNP
rs1233507347 2791 dbSNP
rs929464849 2791 dbSNP
rs982939092 2792 dbSNP
rs1449684448 2799 dbSNP
rs1294225348 2810 dbSNP
rs1223613056 2818 dbSNP
rs908323049 2820 dbSNP
rs1021016183 2830 dbSNP
rs529408334 2845 dbSNP
rs1225951916 2847 dbSNP
rs1210870 2852 dbSNP
rs1240829576 2858 dbSNP
rs1040689045 2874 dbSNP
rs1435133817 2875 dbSNP
rs540623967 2885 dbSNP
rs899520519 2887 dbSNP
rs1343188175 2893 dbSNP
rs1490201866 2900 dbSNP
rs979894565 2907 dbSNP
rs2632264 2908 dbSNP
rs2632263 2912 dbSNP
rs1425013211 2914 dbSNP
rs148964627 2924 dbSNP
rs1156732556 2942 dbSNP
rs1053630839 2945 dbSNP
rs1208889271 2947 dbSNP
rs1402364428 2951 dbSNP
rs547587360 2951 dbSNP
rs893637241 2957 dbSNP
rs2632262 2962 dbSNP
rs370464959 2963 dbSNP
rs1172006024 2969 dbSNP
rs1479506728 2978 dbSNP
rs7349217 2979 dbSNP
rs528729533 2998 dbSNP
rs985433230 3002 dbSNP
rs1488109769 3009 dbSNP
rs1240706921 3011 dbSNP
rs912475010 3015 dbSNP
rs1317975527 3016 dbSNP
rs943880970 3016 dbSNP
rs1021443555 3021 dbSNP
rs1320838403 3023 dbSNP
rs758072466 3028 dbSNP
rs1405150450 3032 dbSNP
rs551671395 3044 dbSNP
rs1033657713 3045 dbSNP
rs780511424 3057 dbSNP
rs1258589729 3059 dbSNP
rs1431503320 3060 dbSNP
rs1179617468 3061 dbSNP
rs1192397978 3063 dbSNP
rs973612808 3067 dbSNP
rs571879036 3068 dbSNP
rs1001607199 3073 dbSNP
rs950856984 3076 dbSNP
rs1172483344 3082 dbSNP
rs983668993 3088 dbSNP
rs1202293776 3094 dbSNP
rs908272440 3095 dbSNP
rs143719333 3096 dbSNP
rs1223670017 3100 dbSNP
rs1013765726 3118 dbSNP
rs1293017367 3123 dbSNP
rs550347045 3126 dbSNP
rs567315969 3131 dbSNP
rs1362438553 3138 dbSNP
rs967244349 3143 dbSNP
rs1000958619 3148 dbSNP
rs1488130850 3158 dbSNP
rs920887462 3160 dbSNP
rs1032837824 3161 dbSNP
rs1465178773 3167 dbSNP
rs1352927739 3168 dbSNP
rs932356781 3169 dbSNP
rs755364773 3170 dbSNP
rs1333100230 3174 dbSNP
rs912507523 3180 dbSNP
rs536358387 3186 dbSNP
rs972617574 3190 dbSNP
rs1368777562 3195 dbSNP
rs1053622501 3197 dbSNP
rs1480040255 3198 dbSNP
rs1249221138 3211 dbSNP
rs893753384 3214 dbSNP
rs553175546 3219 dbSNP
rs190162932 3225 dbSNP
rs748411376 3230 dbSNP
rs1345747218 3236 dbSNP
rs1384829311 3240 dbSNP
rs1431428953 3240 dbSNP
rs78204133 3248 dbSNP
rs1390850018 3250 dbSNP
rs906373796 3253 dbSNP
rs1394382960 3254 dbSNP
rs1300015291 3260 dbSNP
rs1462673010 3272 dbSNP
rs1349588213 3275 dbSNP
rs1003596473 3278 dbSNP
rs1437439313 3290 dbSNP
rs1033766838 3295 dbSNP
rs1240342158 3304 dbSNP
rs551691252 3308 dbSNP
rs895147354 3310 dbSNP
rs1417897852 3324 dbSNP
rs1247779380 3337 dbSNP
rs1377732631 3339 dbSNP
rs1478749373 3342 dbSNP
rs1480716276 3349 dbSNP
rs1290596424 3351 dbSNP
rs994875762 3352 dbSNP
rs1165632834 3356 dbSNP
rs1292274364 3367 dbSNP
rs1027897478 3369 dbSNP
rs1364626818 3371 dbSNP
rs1309228771 3385 dbSNP
rs577303956 3396 dbSNP
rs950969382 3405 dbSNP
rs1005557444 3407 dbSNP
rs1042578572 3408 dbSNP
rs1391938134 3413 dbSNP
rs1407108804 3417 dbSNP
rs200255297 3417 dbSNP
rs111422355 3431 dbSNP
rs75461865 3437 dbSNP
rs1332726818 3446 dbSNP
rs1452245614 3448 dbSNP
rs1366127059 3450 dbSNP
rs769890812 3452 dbSNP
rs976523738 3461 dbSNP
rs1160579371 3463 dbSNP
rs1419173224 3463 dbSNP
rs1438762369 3463 dbSNP
rs1032456338 3481 dbSNP
rs1196794828 3482 dbSNP
rs1490751899 3498 dbSNP
rs1269312104 3499 dbSNP
rs954257267 3500 dbSNP
rs1268488612 3504 dbSNP
rs1317525225 3518 dbSNP
rs921045992 3519 dbSNP
rs1322961206 3528 dbSNP
rs1019644693 3537 dbSNP
rs1406971722 3539 dbSNP
rs953700316 3540 dbSNP
rs965332444 3555 dbSNP
rs1387713489 3570 dbSNP
rs1289998614 3575 dbSNP
rs1219419615 3576 dbSNP
rs989129430 3584 dbSNP
rs1173705645 3594 dbSNP
rs1481208493 3595 dbSNP
rs1333099572 3603 dbSNP
rs914926270 3630 dbSNP
rs952613187 3633 dbSNP
rs536618500 3635 dbSNP
rs1042705148 3636 dbSNP
rs1460854307 3639 dbSNP
rs927090556 3645 dbSNP
rs927781290 3648 dbSNP
rs939221296 3659 dbSNP
rs937107093 3661 dbSNP
rs1190478128 3671 dbSNP
rs1240939732 3684 dbSNP
rs1328532292 3697 dbSNP
rs1296801324 3706 dbSNP
rs375481504 3721 dbSNP
rs916923312 3724 dbSNP
rs1470679762 3729 dbSNP
rs1172309072 3730 dbSNP
rs1415433306 3733 dbSNP
rs1460762196 3748 dbSNP
rs895263255 3753 dbSNP
rs1402418180 3756 dbSNP
rs1474247407 3760 dbSNP
rs575495668 3760 dbSNP
rs1392866270 3773 dbSNP
rs1049069453 3779 dbSNP
rs1443928871 3781 dbSNP
rs1042659225 3782 dbSNP
rs1205586026 3792 dbSNP
rs1398813120 3804 dbSNP
rs902745857 3805 dbSNP
rs1194274438 3809 dbSNP
rs1341800015 3812 dbSNP
rs886444957 3814 dbSNP
rs1271130181 3821 dbSNP
rs1005093678 3823 dbSNP
rs1245701039 3825 dbSNP
rs1381146259 3833 dbSNP
rs936883022 3838 dbSNP
rs1019651798 3842 dbSNP
rs1454083396 3844 dbSNP
rs966228496 3847 dbSNP
rs1327662964 3850 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 51263.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' aguguucacuUCAUCACCCu 5'
                    ||||||||| 
Target 5' --------ucAGUAGUGGGg 3'
 		1 - 12
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_145212 | 3UTR | UCUCUCAGGGAGAAUUAUUUCCUUUCUUUUCUAUUUUAGAUACCUGGAGGGGUGGGGAGAAGUAAGAAUUGUAAGGGAGGUUCAGUAGUGGGGAAUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_145212 | 3UTR | CUGGAGGGGUGGGGAGAAGUAAGAAUUGUAAGGGAGGUUCAGUAGUGGGGAAUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_145212 | 3UTR | AAGAAGGAGGCGGAAAUCUCUCAGGGAGAAUUAUUUCCUUUCUUUUCUAUUUUAGAUACCUGGAGGGGUGGGGAGAAGUAAGAAUUGUAAGGGAGGUUCAGUAGUGGGGAAUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_145212 | 3UTR | ACCUGGAGGGGUGGGGAGAAGUAAGAAUUGUAAGGGAGGUUCAGUAGUGGGGAAUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_145212 | 3UTR | UAUUUUAGAUACCUGGAGGGGUGGGGAGAAGUAAGAAUUGUAAGGGAGGUUCAGUAGUGGGGAAUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_145212 | 3UTR | UGGAGGGGUGGGGAGAAGUAAGAAUUGUAAGGGAGGUUCAGUAGUGGGGAAUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000338148.3 | 3UTR | UCAGUAGUGGGGAAUUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
83 hsa-miR-4301 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT081134 LDLR low density lipoprotein receptor 2 4
MIRT090911 ARHGEF26 Rho guanine nucleotide exchange factor 26 2 2
MIRT229436 MECP2 methyl-CpG binding protein 2 2 2
MIRT274717 CPSF6 cleavage and polyadenylation specific factor 6 2 2
MIRT350957 BACH1 BTB domain and CNC homolog 1 2 2
MIRT386722 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT446022 PEX3 peroxisomal biogenesis factor 3 2 2
MIRT481303 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 2 14
MIRT483959 ZNF354B zinc finger protein 354B 2 6
MIRT495667 TUBAL3 tubulin alpha like 3 2 2
MIRT496554 TBX15 T-box 15 2 2
MIRT497702 ARL6IP6 ADP ribosylation factor like GTPase 6 interacting protein 6 2 2
MIRT498105 RMND5A required for meiotic nuclear division 5 homolog A 2 2
MIRT512535 SEMA4D semaphorin 4D 2 2
MIRT512556 MFN2 mitofusin 2 2 6
MIRT521465 RABGAP1 RAB GTPase activating protein 1 2 6
MIRT526236 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT526743 HLA-DOB major histocompatibility complex, class II, DO beta 2 2
MIRT527578 BRD7 bromodomain containing 7 2 4
MIRT528038 WT1 Wilms tumor 1 2 2
MIRT528267 GPRIN2 G protein regulated inducer of neurite outgrowth 2 2 2
MIRT528505 HTR7 5-hydroxytryptamine receptor 7 2 4
MIRT528758 RPS27 ribosomal protein S27 2 6
MIRT528999 IPO9 importin 9 2 2
MIRT529701 MRPL30 mitochondrial ribosomal protein L30 2 2
MIRT529781 C17orf82 chromosome 17 open reading frame 82 2 2
MIRT533797 TMEM119 transmembrane protein 119 2 6
MIRT535308 PHF12 PHD finger protein 12 2 2
MIRT535917 MKL2 MKL1/myocardin like 2 2 2
MIRT544892 OSBPL1A oxysterol binding protein like 1A 2 2
MIRT555423 PPIC peptidylprolyl isomerase C 2 2
MIRT562068 KLHL15 kelch like family member 15 2 2
MIRT565623 SLC31A1 solute carrier family 31 member 1 2 2
MIRT565661 SIX1 SIX homeobox 1 2 2
MIRT570138 IL1RL2 interleukin 1 receptor like 2 2 2
MIRT571045 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT621232 LMAN1 lectin, mannose binding 1 2 2
MIRT622272 SH3TC2 SH3 domain and tetratricopeptide repeats 2 2 2
MIRT623844 GAN gigaxonin 2 2
MIRT626158 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626464 CMKLR1 chemerin chemokine-like receptor 1 2 2
MIRT632087 ALDH1A2 aldehyde dehydrogenase 1 family member A2 2 2
MIRT637243 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT642710 FGFR1OP2 FGFR1 oncogene partner 2 2 2
MIRT643611 KANSL3 KAT8 regulatory NSL complex subunit 3 2 2
MIRT644270 PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 2 2
MIRT645470 SPIN3 spindlin family member 3 2 2
MIRT649193 DNPEP aspartyl aminopeptidase 2 2
MIRT650776 POP4 POP4 homolog, ribonuclease P/MRP subunit 2 2
MIRT651345 ZC2HC1C zinc finger C2HC-type containing 1C 2 2
MIRT652237 TRAPPC3L trafficking protein particle complex 3 like 2 2
MIRT652587 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT654591 PURA purine rich element binding protein A 2 2
MIRT654649 PTAFR platelet activating factor receptor 2 2
MIRT656842 KLF7 Kruppel like factor 7 2 2
MIRT657209 IKZF2 IKAROS family zinc finger 2 2 2
MIRT658513 ETV3 ETS variant 3 2 2
MIRT659448 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT668816 CYLD CYLD lysine 63 deubiquitinase 2 2
MIRT669067 CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 2 2
MIRT677711 ELOF1 elongation factor 1 homolog 2 4
MIRT687146 PTPN12 protein tyrosine phosphatase, non-receptor type 12 2 2
MIRT698498 THOC2 THO complex 2 2 2
MIRT707930 PPP1R3D protein phosphatase 1 regulatory subunit 3D 4 2
MIRT708737 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT710031 POLL DNA polymerase lambda 2 2
MIRT712175 STK4 serine/threonine kinase 4 2 2
MIRT715297 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT716892 AGPAT6 glycerol-3-phosphate acyltransferase 4 2 2
MIRT717378 RBM41 RNA binding motif protein 41 2 2
MIRT718082 CLIC5 chloride intracellular channel 5 2 2
MIRT718721 ANKRD18A ankyrin repeat domain 18A 2 2
MIRT719152 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT719224 CAMK4 calcium/calmodulin dependent protein kinase IV 2 2
MIRT719528 SRCIN1 SRC kinase signaling inhibitor 1 2 2
MIRT719861 KLF2 Kruppel like factor 2 2 2
MIRT720326 CAMK2G calcium/calmodulin dependent protein kinase II gamma 2 2
MIRT721596 SREBF1 sterol regulatory element binding transcription factor 1 2 2
MIRT722020 NEBL nebulette 2 2
MIRT722484 QSOX1 quiescin sulfhydryl oxidase 1 2 2
MIRT722614 TEAD1 TEA domain transcription factor 1 2 2
MIRT723664 RPTN repetin 2 2
MIRT723939 SVOP SV2 related protein 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4301 Cisplatin 5460033 NSC119875 approved sensitive High Hepatocellular Carcinoma cell line (Hep3B, 97L)
hsa-miR-4301 Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-mir-4301 Paclitaxel 36314 NSC125973 approved resistant cell line (BAS)
hsa-mir-4301 Paclitaxel 36314 NSC125973 approved sensitive cell line (W1)
hsa-mir-4301 Doxorubicin 31703 NSC123127 approved sensitive cell line (W1)
hsa-mir-4301 Methotrexate 126941 NSC740 approved sensitive cell line (W1)
hsa-mir-4301 Topotecan 60699 NSC609699 approved sensitive cell line (W1)
hsa-miR-4301 Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-4301 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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