pre-miRNA Information
pre-miRNA hsa-mir-3160-1   
Genomic Coordinates chr11: 46451805 - 46451889
Description Homo sapiens miR-3160-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-3160-2   
Genomic Coordinates chr11: 46451807 - 46451887
Description Homo sapiens miR-3160-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3160-3p
Sequence 54| AGAGCUGAGACUAGAAAGCCCA |75
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30582333 1 COSMIC
COSN1535547 3 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1396368683 1 dbSNP
rs1162409303 2 dbSNP
rs1404378453 12 dbSNP
rs1171960732 14 dbSNP
rs1324633375 16 dbSNP
rs1187765019 16 dbSNP
rs1300058326 19 dbSNP
rs1432898407 21 dbSNP
rs1011279103 22 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MTHFD1   
Synonyms MTHFC, MTHFD
Description methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1
Transcript NM_005956   
Expression
Putative miRNA Targets on MTHFD1
3'UTR of MTHFD1
(miRNA target sites are highlighted)
>MTHFD1|NM_005956|3'UTR
   1 ACAGATCACCATCCATCTTCAAGAAGCTACTTTGAAAGTCTGGCCAGTGTCTATTCAGGCCCACTGGGAGTTAGGAAGTA
  81 TAAGTAAGCCAAGAGAAGTCAGCCCCTGCCCAGAAGATCTGAAACTAATAGTAGGAGTTTCCCCAGAAGTCATTTTCAGC
 161 CTTAATTCTCATCATGTATAAATTAACATAAATCATGCATGTCTGTTTACTTTAGTGACGTTCCACAGAATAAAAGGAAA
 241 CAAGTTTGCCATCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acccgaaAGAUCAGAGUCGaga 5'
                 || | |:|||||   
Target 5' ccagaagTC-ATTTTCAGCctt 3'
143 - 163 110.00 -8.30
2
miRNA  3' acCCG---AAAGAUCAGAGUCgaga 5'
            |||   | ||||  :||||    
Target 5' ctGGCCAGTGTCTA--TTCAGgccc 3'
40 - 62 96.00 -7.76
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN16442036 53 COSMIC
COSN16983045 661 COSMIC
COSN30304515 882 COSMIC
COSN6256425 978 COSMIC
COSN20809359 1366 COSMIC
COSN31559473 1519 COSMIC
COSN16378855 1634 COSMIC
COSN30580403 1639 COSMIC
rs2281603 1077 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1465119221 5 dbSNP
rs962605527 6 dbSNP
rs765124337 7 dbSNP
rs183668402 11 dbSNP
rs779093309 16 dbSNP
rs1449333934 17 dbSNP
rs1288282267 20 dbSNP
rs369797412 21 dbSNP
rs758422094 24 dbSNP
rs926741915 32 dbSNP
rs779871054 33 dbSNP
rs368247374 35 dbSNP
rs546183033 43 dbSNP
rs747834647 45 dbSNP
rs769182772 46 dbSNP
rs772835543 47 dbSNP
rs566171523 50 dbSNP
rs1247762398 53 dbSNP
rs141192394 65 dbSNP
rs1180805988 67 dbSNP
rs945589340 72 dbSNP
rs189061862 80 dbSNP
rs192843872 81 dbSNP
rs904001215 86 dbSNP
rs776917950 90 dbSNP
rs1010630892 104 dbSNP
rs1334553010 115 dbSNP
rs1039853219 119 dbSNP
rs1392060070 132 dbSNP
rs1390240358 137 dbSNP
rs1399272794 140 dbSNP
rs1426855124 149 dbSNP
rs1463925550 156 dbSNP
rs1021970875 161 dbSNP
rs1386855692 181 dbSNP
rs183727271 202 dbSNP
rs557940163 213 dbSNP
rs997938759 216 dbSNP
rs1183295218 217 dbSNP
rs1437906410 228 dbSNP
rs1029309680 242 dbSNP
rs1175946436 251 dbSNP
rs1490758794 253 dbSNP
rs1447320145 263 dbSNP
rs999142080 264 dbSNP
rs1349103953 266 dbSNP
rs577222665 268 dbSNP
rs1239782925 271 dbSNP
rs1330581563 277 dbSNP
rs1301445681 280 dbSNP
rs1406959503 284 dbSNP
rs1215376148 289 dbSNP
rs1366476428 294 dbSNP
rs1303476045 298 dbSNP
rs779930031 302 dbSNP
rs1405611187 303 dbSNP
rs993396165 306 dbSNP
rs1316424124 321 dbSNP
rs146224757 323 dbSNP
rs1264257732 330 dbSNP
rs970548451 331 dbSNP
rs1461282659 333 dbSNP
rs1481200952 340 dbSNP
rs79790885 341 dbSNP
rs1235250682 345 dbSNP
rs1215471593 346 dbSNP
rs1445643209 349 dbSNP
rs1286851930 352 dbSNP
rs1476148817 354 dbSNP
rs573312145 355 dbSNP
rs1281424371 358 dbSNP
rs1225453325 362 dbSNP
rs1346343710 373 dbSNP
rs940008952 374 dbSNP
rs1429691253 383 dbSNP
rs542519973 387 dbSNP
rs922505910 395 dbSNP
rs1476692597 397 dbSNP
rs933891260 421 dbSNP
rs1320121145 422 dbSNP
rs1401187964 424 dbSNP
rs1405326459 434 dbSNP
rs1429836943 436 dbSNP
rs1359647902 448 dbSNP
rs1413841930 453 dbSNP
rs1429477207 460 dbSNP
rs1185589205 462 dbSNP
rs1474259041 462 dbSNP
rs1050029846 477 dbSNP
rs889605594 478 dbSNP
rs541534853 482 dbSNP
rs945420534 483 dbSNP
rs1461221726 497 dbSNP
rs761535553 503 dbSNP
rs1043483342 505 dbSNP
rs925591987 506 dbSNP
rs1213024984 513 dbSNP
rs556067729 515 dbSNP
rs902205183 524 dbSNP
rs1039182953 528 dbSNP
rs999188920 529 dbSNP
rs59470472 535 dbSNP
rs1344845797 558 dbSNP
rs370876472 559 dbSNP
rs1169179283 561 dbSNP
rs1421227956 563 dbSNP
rs1168811931 568 dbSNP
rs1444402178 569 dbSNP
rs564747088 571 dbSNP
rs1241774836 576 dbSNP
rs767430313 577 dbSNP
rs555007578 578 dbSNP
rs970220542 581 dbSNP
rs1202582299 589 dbSNP
rs1309434943 592 dbSNP
rs1274020727 600 dbSNP
rs539973929 602 dbSNP
rs886760517 616 dbSNP
rs1261951191 624 dbSNP
rs559697206 632 dbSNP
rs868641830 635 dbSNP
rs1312727219 649 dbSNP
rs1454480305 650 dbSNP
rs760668251 653 dbSNP
rs1379864753 658 dbSNP
rs1297056161 659 dbSNP
rs1439431684 666 dbSNP
rs1355851994 672 dbSNP
rs528827712 685 dbSNP
rs1170724372 687 dbSNP
rs1423668747 688 dbSNP
rs1487109869 689 dbSNP
rs990649277 702 dbSNP
rs1201225241 706 dbSNP
rs1165909576 717 dbSNP
rs1294841904 725 dbSNP
rs1016974714 727 dbSNP
rs1407922573 731 dbSNP
rs1003914010 732 dbSNP
rs1481663224 733 dbSNP
rs1233612574 736 dbSNP
rs747902386 737 dbSNP
rs961395464 743 dbSNP
rs972719231 747 dbSNP
rs1170717175 756 dbSNP
rs922590130 763 dbSNP
rs1401318353 771 dbSNP
rs1158146658 773 dbSNP
rs1002546137 778 dbSNP
rs548581884 779 dbSNP
rs34559242 792 dbSNP
rs765859603 797 dbSNP
rs1306208874 811 dbSNP
rs753392513 818 dbSNP
rs186961580 828 dbSNP
rs1374858249 829 dbSNP
rs1304054027 830 dbSNP
rs778464987 832 dbSNP
rs1278397211 834 dbSNP
rs191810042 839 dbSNP
rs902255713 840 dbSNP
rs1458764793 843 dbSNP
rs1345052621 844 dbSNP
rs1157578498 846 dbSNP
rs992190814 850 dbSNP
rs1408804639 852 dbSNP
rs551285922 853 dbSNP
rs1479549526 856 dbSNP
rs1271355280 857 dbSNP
rs1021029392 861 dbSNP
rs1281753825 867 dbSNP
rs967110588 869 dbSNP
rs1213549582 873 dbSNP
rs1318702400 874 dbSNP
rs571462033 875 dbSNP
rs1222396611 878 dbSNP
rs1352058423 886 dbSNP
rs1343212037 901 dbSNP
rs139220969 902 dbSNP
rs1361685365 913 dbSNP
rs1284688693 924 dbSNP
rs896127789 934 dbSNP
rs574846690 944 dbSNP
rs1023201538 945 dbSNP
rs1175747922 948 dbSNP
rs183618000 953 dbSNP
rs1468300287 957 dbSNP
rs1431646301 961 dbSNP
rs1200394596 968 dbSNP
rs566993386 971 dbSNP
rs535815280 974 dbSNP
rs1260735609 977 dbSNP
rs758707360 983 dbSNP
rs961445509 984 dbSNP
rs1268727979 986 dbSNP
rs186803444 988 dbSNP
rs923414096 990 dbSNP
rs1030091012 992 dbSNP
rs1450789880 995 dbSNP
rs955389628 998 dbSNP
rs1233519208 1005 dbSNP
rs1325532207 1007 dbSNP
rs1293813887 1009 dbSNP
rs1196519484 1030 dbSNP
rs192736811 1034 dbSNP
rs1366465330 1044 dbSNP
rs1050821958 1047 dbSNP
rs1234486366 1049 dbSNP
rs1408381451 1051 dbSNP
rs778277362 1054 dbSNP
rs1461652148 1055 dbSNP
rs1178025896 1058 dbSNP
rs1371579829 1067 dbSNP
rs2281603 1077 dbSNP
rs1038013425 1078 dbSNP
rs1426691589 1095 dbSNP
rs1248510665 1099 dbSNP
rs1459980270 1105 dbSNP
rs1164413802 1109 dbSNP
rs1200554036 1110 dbSNP
rs1338295694 1123 dbSNP
rs1249261767 1127 dbSNP
rs1390345940 1128 dbSNP
rs1229996559 1132 dbSNP
rs558052839 1133 dbSNP
rs1343302546 1156 dbSNP
rs1314871916 1164 dbSNP
rs898174831 1167 dbSNP
rs1002059741 1174 dbSNP
rs578145422 1180 dbSNP
rs3215668 1185 dbSNP
rs748661193 1185 dbSNP
rs946565924 1187 dbSNP
rs1020746386 1190 dbSNP
rs1430711261 1192 dbSNP
rs771624595 1200 dbSNP
rs185382586 1203 dbSNP
rs532416623 1205 dbSNP
rs1370151480 1209 dbSNP
rs1187554115 1214 dbSNP
rs1056187162 1215 dbSNP
rs1436732914 1227 dbSNP
rs1001370081 1229 dbSNP
rs1483200883 1234 dbSNP
rs745975524 1234 dbSNP
rs1291471660 1235 dbSNP
rs1244266861 1240 dbSNP
rs1362171681 1253 dbSNP
rs1285307476 1257 dbSNP
rs143975333 1272 dbSNP
rs1334048083 1277 dbSNP
rs1309333780 1280 dbSNP
rs947725809 1283 dbSNP
rs528962753 1287 dbSNP
rs906135414 1291 dbSNP
rs1005721595 1293 dbSNP
rs571745862 1297 dbSNP
rs1207775664 1303 dbSNP
rs897301574 1308 dbSNP
rs145941228 1313 dbSNP
rs562551878 1314 dbSNP
rs376862180 1320 dbSNP
rs1183773732 1321 dbSNP
rs1472685315 1323 dbSNP
rs551690505 1324 dbSNP
rs1220639463 1350 dbSNP
rs974977391 1366 dbSNP
rs1453699226 1368 dbSNP
rs1291113441 1378 dbSNP
rs1205059234 1380 dbSNP
rs74058127 1381 dbSNP
rs113880270 1382 dbSNP
rs1229117992 1386 dbSNP
rs1018657868 1387 dbSNP
rs1281626987 1397 dbSNP
rs1184310012 1399 dbSNP
rs1332599566 1405 dbSNP
rs1368052820 1406 dbSNP
rs1481944134 1409 dbSNP
rs1324011676 1410 dbSNP
rs1184139292 1411 dbSNP
rs1186739317 1412 dbSNP
rs1412932142 1412 dbSNP
rs71123851 1413 dbSNP
rs75480958 1413 dbSNP
rs1171058637 1416 dbSNP
rs1427286780 1417 dbSNP
rs1415111616 1419 dbSNP
rs374792658 1419 dbSNP
rs367875373 1420 dbSNP
rs967959781 1422 dbSNP
rs1160689768 1428 dbSNP
rs1307952267 1429 dbSNP
rs1389216666 1429 dbSNP
rs979319675 1431 dbSNP
rs1306634068 1433 dbSNP
rs923781980 1433 dbSNP
rs1412036038 1438 dbSNP
rs1308977914 1439 dbSNP
rs547628613 1440 dbSNP
rs767998951 1442 dbSNP
rs1232009686 1457 dbSNP
rs1372784221 1464 dbSNP
rs1247627545 1467 dbSNP
rs1272724570 1471 dbSNP
rs1346503254 1478 dbSNP
rs776174229 1484 dbSNP
rs1273801902 1485 dbSNP
rs1803948 1486 dbSNP
rs956511878 1490 dbSNP
rs1038552568 1492 dbSNP
rs1209369998 1495 dbSNP
rs1207246631 1501 dbSNP
rs1252213457 1506 dbSNP
rs992339857 1513 dbSNP
rs1346035803 1517 dbSNP
rs761074146 1519 dbSNP
rs1450243344 1521 dbSNP
rs1196939349 1525 dbSNP
rs1248737817 1526 dbSNP
rs1275170037 1526 dbSNP
rs917669759 1531 dbSNP
rs764603635 1532 dbSNP
rs919589706 1533 dbSNP
rs1168091193 1536 dbSNP
rs1388437359 1553 dbSNP
rs937713219 1553 dbSNP
rs1432118333 1558 dbSNP
rs1169803186 1559 dbSNP
rs1803949 1561 dbSNP
rs1404720257 1562 dbSNP
rs1173691029 1565 dbSNP
rs1390389193 1587 dbSNP
rs1248578397 1589 dbSNP
rs1425463597 1589 dbSNP
rs1385520831 1593 dbSNP
rs1321161559 1594 dbSNP
rs1332513931 1597 dbSNP
rs1801340 1600 dbSNP
rs757571129 1620 dbSNP
rs1339476885 1628 dbSNP
rs771755947 1630 dbSNP
rs765222086 1639 dbSNP
rs1226456334 1645 dbSNP
rs1044740421 1648 dbSNP
rs1207898380 1649 dbSNP
rs1292262810 1652 dbSNP
rs896368478 1657 dbSNP
rs1452445702 1664 dbSNP
rs1188193863 1665 dbSNP
rs1013463342 1670 dbSNP
rs535958062 1671 dbSNP
rs941631298 1674 dbSNP
rs1189774781 1678 dbSNP
rs555466113 1680 dbSNP
rs1229018730 1693 dbSNP
rs1038577759 1695 dbSNP
rs79550300 1696 dbSNP
rs111700653 1704 dbSNP
rs1334066790 1706 dbSNP
rs1449629153 1708 dbSNP
rs569267675 1709 dbSNP
rs1424670112 1712 dbSNP
rs1392378881 1716 dbSNP
rs139387803 1720 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 4522.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acccgaaagAUCAGAGUCGAGa 5'
                   |: ||||||||| 
Target 5' ------acgUGAUCUCAGCUCa 3'
1 - 16
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000216605.8 | 3UTR | ACGUGAUCUCAGCUCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
118 hsa-miR-3160-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT066658 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT075318 SF3B3 splicing factor 3b subunit 3 2 4
MIRT077083 EIF1 eukaryotic translation initiation factor 1 2 2
MIRT100381 HSPA1B heat shock protein family A (Hsp70) member 1B 2 6
MIRT135259 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 4
MIRT184913 ZNF268 zinc finger protein 268 2 2
MIRT218862 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT446580 FPR2 formyl peptide receptor 2 2 2
MIRT448834 FGD4 FYVE, RhoGEF and PH domain containing 4 2 2
MIRT449455 RNF13 ring finger protein 13 2 2
MIRT452284 CARD8 caspase recruitment domain family member 8 2 2
MIRT452628 FAM162A family with sequence similarity 162 member A 2 2
MIRT453454 GLG1 golgi glycoprotein 1 2 2
MIRT454188 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 6
MIRT454434 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT454575 NT5DC3 5'-nucleotidase domain containing 3 2 2
MIRT455555 TRAF1 TNF receptor associated factor 1 2 6
MIRT455841 MPL MPL proto-oncogene, thrombopoietin receptor 2 6
MIRT455969 BCAS4 breast carcinoma amplified sequence 4 2 4
MIRT456805 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457320 DUSP19 dual specificity phosphatase 19 2 2
MIRT457366 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT457684 ZNF587 zinc finger protein 587 2 2
MIRT458158 LYRM4 LYR motif containing 4 2 6
MIRT458641 SGPP2 sphingosine-1-phosphate phosphatase 2 2 2
MIRT459134 FADS6 fatty acid desaturase 6 2 2
MIRT459153 NARF nuclear prelamin A recognition factor 2 4
MIRT460460 NOM1 nucleolar protein with MIF4G domain 1 2 4
MIRT460974 STK17B serine/threonine kinase 17b 2 2
MIRT461439 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT461507 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 2 2
MIRT462490 GSR glutathione-disulfide reductase 2 2
MIRT462638 PHF5A PHD finger protein 5A 2 2
MIRT463279 ZFX zinc finger protein, X-linked 2 2
MIRT463360 ZFAND4 zinc finger AN1-type containing 4 2 2
MIRT465777 TMOD3 tropomodulin 3 2 2
MIRT466143 TMEM120B transmembrane protein 120B 2 2
MIRT468401 SETD3 SET domain containing 3 2 2
MIRT468998 RNPS1 RNA binding protein with serine rich domain 1 2 2
MIRT471574 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT472108 NME2 NME/NM23 nucleoside diphosphate kinase 2 2 2
MIRT472125 NME1-NME2 NME1-NME2 readthrough 2 2
MIRT473020 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT473083 MORN4 MORN repeat containing 4 2 2
MIRT475598 HMGB2 high mobility group box 2 2 4
MIRT475937 GXYLT2 glucoside xylosyltransferase 2 2 8
MIRT476117 GPR157 G protein-coupled receptor 157 2 2
MIRT476406 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT478003 DNAL1 dynein axonemal light chain 1 2 2
MIRT487969 IQSEC2 IQ motif and Sec7 domain 2 2 2
MIRT489418 TUBB2A tubulin beta 2A class IIa 2 2
MIRT491522 IL10RA interleukin 10 receptor subunit alpha 2 2
MIRT492673 PLEC plectin 2 2
MIRT493545 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT513085 USP9X ubiquitin specific peptidase 9, X-linked 2 2
MIRT514009 CECR2 CECR2, histone acetyl-lysine reader 2 4
MIRT516683 ZNF860 zinc finger protein 860 2 2
MIRT518392 ZNF250 zinc finger protein 250 2 2
MIRT522683 LUZP1 leucine zipper protein 1 2 6
MIRT524488 CEP97 centrosomal protein 97 2 2
MIRT527457 CLEC12B C-type lectin domain family 12 member B 2 2
MIRT527705 IL17REL interleukin 17 receptor E like 2 2
MIRT531647 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT532381 UMPS uridine monophosphate synthetase 2 2
MIRT532588 MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 2 2
MIRT533555 TPM4 tropomyosin 4 2 2
MIRT548371 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 4
MIRT550250 PVR poliovirus receptor 2 2
MIRT552555 ZFP36L2 ZFP36 ring finger protein like 2 2 4
MIRT554113 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT554131 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT561344 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT561638 RUNX3 runt related transcription factor 3 2 2
MIRT566497 PBX2P1 PBX homeobox 2 pseudogene 1 2 2
MIRT570583 OTUD7B OTU deubiquitinase 7B 2 2
MIRT572731 MCTS1 MCTS1, re-initiation and release factor 2 2
MIRT574041 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT575231 Fut1 fucosyltransferase 1 2 2
MIRT606811 BICD2 BICD cargo adaptor 2 2 2
MIRT621016 CLSTN3 calsyntenin 3 2 2
MIRT637852 PDCL3 phosducin like 3 2 2
MIRT640477 ZNF557 zinc finger protein 557 2 2
MIRT642827 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT643887 IMP4 IMP4, U3 small nucleolar ribonucleoprotein 2 2
MIRT664874 PCNXL2 pecanex homolog 2 2 2
MIRT680528 PRIM2 DNA primase subunit 2 2 2
MIRT680648 KIAA1456 KIAA1456 2 2
MIRT680807 ZNF578 zinc finger protein 578 2 2
MIRT680921 STX2 syntaxin 2 2 2
MIRT681112 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT681147 INTS7 integrator complex subunit 7 2 2
MIRT681966 TFCP2 transcription factor CP2 2 2
MIRT684316 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT684906 GSG2 histone H3 associated protein kinase 2 2
MIRT685499 MED16 mediator complex subunit 16 2 2
MIRT685929 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686875 SLC25A32 solute carrier family 25 member 32 2 2
MIRT688204 FNIP1 folliculin interacting protein 1 2 2
MIRT688791 CCNB1 cyclin B1 2 2
MIRT689227 RPS19 ribosomal protein S19 2 2
MIRT690470 ZNF33A zinc finger protein 33A 2 2
MIRT691982 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 2 2
MIRT694006 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694529 TRIM72 tripartite motif containing 72 2 2
MIRT695420 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT695784 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT697799 UBXN2A UBX domain protein 2A 2 2
MIRT698275 TMEM2 transmembrane protein 2 2 2
MIRT698317 TMEM136 transmembrane protein 136 2 2
MIRT699971 RREB1 ras responsive element binding protein 1 2 2
MIRT700717 PNO1 partner of NOB1 homolog 2 2
MIRT701721 MTMR12 myotubularin related protein 12 2 2
MIRT701879 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT702959 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT706178 ZNF716 zinc finger protein 716 2 2
MIRT706463 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT718154 TTC33 tetratricopeptide repeat domain 33 2 2
MIRT718711 ANKRD18A ankyrin repeat domain 18A 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3160-3p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3160-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-3160-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-3160-3p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-3160-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3160-3p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide resistant cell line (Bads-200)

Error report submission