miRTarBase - #MIRT533338


—
pre-miRNA Information
pre-miRNA hsa-mir-500b   
Genomic Coordinates chrX: 50010672 - 50010750
Description Homo sapiens miR-500b stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-500b-3p
Sequence 51| GCACCCAGGCAAGGAUUCUG |70
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs782140253 8 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol UNC119B   
Synonyms POC7B
Description unc-119 lipid binding chaperone B
Transcript NM_001080533   
Expression
Putative miRNA Targets on UNC119B
3'UTR of UNC119B
(miRNA target sites are highlighted)		 
>UNC119B|NM_001080533|3'UTR
   1 GTGCTGCAAGAGTAGATAGGGGAGGTGCTTTGCCGCGGCCACAAGATCCTGGCACACGGAGATGATCGAAGCTGCAGTTT
  81 GTCAACACACATCTGGAACCTGGCCCCAGGAAGCCAAGGCTGGGGTGGCAGTTTCCTGCGCGCCAAAGGAGCTGCCAAAC
 161 AGTGCTGTGTTTTCTTCCCCAGTATTTTTTCTTCCCTTTTTTTCCTGCCCCGTAGGTTGCAGAGGTACTATAGTAAAGTA
 241 AAAGGTTAGGATAAGGGTCCTGGAATCCAGATAAAAAAGTTTATTTTCCGTAGTTCTGGCTGCCTGTTGGTTGTCTTGAC
 321 GACCAGGCATAGCTGTGCCTGGTGAGAAGGCTCTGGCCAGGCCCACCAGCAGGTCAGCAGCTCTTAAGGTTCCTGGGTGC
 401 TGTGGGAAGCTGAAAGGTAGGCCTCTTCCAGGTAGCTCCTCCTCTCACCTCCGGCATTGCCATCAGCGCAGTCTGCCCTC
 481 GGTCTGTGTGAAGTCTTAAACCAACTGGAAGACACTTGAAAGGGTGGGGAGGGAGGGAGGTGCCAAGAGTGGAGGCACCA
 561 AGGAATGGGTGATGCTGCCAAGCTGAAGGGTCTGCTTTGTGGAGAGGCTGCTGCTCTGTCTGACTTCCAGGGTCTCAGCC
 641 AGCCCTCCTGGGAATAGACCAAGTTTTCAGCCTGGCAGTGCCTTCTGTTCCCATTTTGGAGGACAGACAAGCTTGCTCCA
 721 CATCTCCTGGCTCCTCCCTTCTGAGTCTCATGAAATAGAATGAGTCAGCTCTGCTCATGGAACAGTAGTATCTCTTGAGG
 801 CCAGAGCAGGTCTTGTATTTTGTTTTTTTATTTCCAGACTTCTTTCGGGGAGGTTTTATAAAATGACAGTGGTGTTCCCA
 881 GCATATGTGATATGTGGTTAGACTTCTGATAGTATCAGCTTCCAGGGGCTAATCTGGCTTATGTTGGGAGGATATGCTTA
 961 CGAATCAGCAGCAGCTTTCTAAAGGAGAGATTTGACTTTTCTCTGCACTGCACAGCCTGGAGGATTGGCTTTTGATGGGG
1041 ATTTGCCTCCGAAGCTCTTTGTACATTTCTTGTTTAGGAGGGTTTTCCTATCTACCTTTCTACTGAAGTAGTTTCTGGAA
1121 CTTTCCTGGTGGATCAGAGTTACGTAATGCAGTCTGAGCCTTCAGACTGCTAGTTAGAATTGTTTTAGGTGTTCAGAAAG
1201 GGCAAAATAGGCTGATGTGGCCTGTCAGAGTGATGTGTTCTCAAAAAAGTTCACTTGCACATCTGTGGGCTGCTTTTGTC
1281 CTCAGACCCTTAGTGGACAGACTCCACAAACCCTCTGATGAGACGATTGATGTGGCCAGGGTCCAGTTAGCATCAGTAGA
1361 AGGATGTCACTAGGAAAGGCCCAGGTATCTGGTAAGTGACTGTGAGGTGTCACAGTACCTGTGACAGGAGAGTGTCCTGA
1441 TGTGCTTGGGAGAAAGGCCGTATGGGGGCCAGGGATGGAAGAGACAGTGTGTGGCCACAGAAATTCCTGTCCATCCACCA
1521 CCAGTGCTGCTCCCTGTGTGGGCTTTAGGGCGAGTGGCCCCGAACCTTGGCCCAGTGCTTTGTCCCAGGCCAGAGTCTTG
1601 GCAATGCCACATGCTGGCAGCTTTCTCACTGAGAAGGTCCTAGCTTACCCCTGTGTGCTGGCCTTGGATTCAGCCCCGAG
1681 AGAGGGGAGAGACCATTCCTCCTGTGGAGTGGGTTCCTTATCACCAGACCGGCCACTCTCAGAACTGGCGTCCACTGTAA
1761 ATCCAGGTGCCTTACGTGTGGCTCTGTCCCTTATGCTGCAGGGGAAAGCTGCATTGCCATTGTTCCCACCTCCTCACTGG
1841 CAGAAAGATGCCAGGGCTGTTAGCACTGTCTCCTCACCTTCTGTTTCTCATTGTGGCTCCTCAAATGGGATTTGCATGTT
1921 CCTGTCAAGCGTAACAACAATCCCTTCTCTCTTTGACAGAGGCCCAGGTGGGACAGTTTCTACTATTTGATATTTGAGTA
2001 TTATCTGGGATGTGGTTCTGGAGCTGCCCAGAGCTGTGCTTAGTAGAGTGTGTCTTGGAAACATGCCCCTGGGCACACTG
2081 TATCTGCTACATTAGTGGGCTATCTCTTATCTGCAGTGTTCGCTTTTGCTAGAAAGAGGATGTGGAGGAAGGAGGAGGTG
2161 GGCAATCTGGCTTGAGTTGTGCTGTATCCTCTTCCTTGTTAGCTTGCCTTAGTCTCACTGGAGACCATTTGCGGATAGTG
2241 CTTGGTCCATGCCCAGCAGGACAGGGCTTTGCTGCTTCTGAAAGTCTGGTGTTCTGTATCTGGGGCTGTGGGTTCCTGTG
2321 TCTAGCTGCTCAGGAAATCTTGAGAAGCATTCCACTCTGGGGTGTAAACCAGTATGAGTTTGAAATTCAAGCGTTTGTAC
2401 CTGAGTTGGGGAGAGAATTGCAAGGCATACTTTCTCTGAAAGTAACAGAACCATTCAGGCTGCCATGTTATTAAGGAATC
2481 TGAACTGTTGATAGCAGTTACCTTGTGGGTGATACAATGGGAGGCGGCAAAAAAACTACCTGCATAGGAGACCCTGCCCT
2561 TTGTCAAGAGCTGGGAGCACATTTCATCAGAGTAGCAGGCCCACCTGGTGCCAGAGGGCCTGCCCCTCCTGCTTCTGTTC
2641 CTTTGCCTTGCAGTCTCCTGGAGAGAGCCTCTCTTTTCCTGTACAGCCTTTGGGCCAAAATGCCCTTCTAGCTTCTCCAA
2721 AGAAGATCCGAGTTTATTTCATTCTATGTTTTAAGAGGTAAAAGGACATAACAAGTGAAAGAAGTTTTGGGCTAAAGTAG
2801 GCTATGTCTCCTTATGTATTACTCAATACTGTTTTGCAGAGAAAACATTTTTCAAGCATGTGCTTCCTGAAGACACCTCA
2881 GTCTTTGGGCCATTTGATTTCCAATACATAGGGTGGAAGAATGTGATTTTGGGGCTGACCATAAACTGGAAATTTGTGAA
2961 ATGGCAGTGATTGGGCAATCTTCAGTTTATTTTTTCAGTTGAAGTGGAACTCATTTCTGGAATGGATTTAATAGGCTGTG
3041 TCTAATGTACAAACTGGGTGAGTCCTGCCTTAGTGTGTCCTGCCCCACCGGTACGCTTCCAGGATACTCTTTTCCCCTCT
3121 GTAAAGTCACTTTCTTCTGATGGCCAGTGTCACTATGATGTCAGTGAGGTCTGGGGATGAGGACAGTGTGTCCTGAAATT
3201 CACAGGACTGACTCCTCACCCCAGTGCACGAGGATTCCTGTGGCATCAGGTGCTGCTGTACCTGGTGTAGGAGCCTAATC
3281 ATTGAACCATTGTGTTACTCACATTCCATGTCACAGAACATATCAGCCTCAAGAAGGATTTGGTGGAGGTGGATTTACCA
3361 CTGGTTTTACAAAGGACCGTGTAAAGTCATTGAAGTTGTGAAAGTCTATTTTTTTTCCTGTAAATCTATTTTTTACAGAA
3441 TATAAGAAACATCAATGACCTGATCTGTCCTTCCTCCTCCTTCCCGCTTCCCCCAAAATCACATTCCAGTTTTTATTGTC
3521 TTTGTGTCCAAAGTAAACTAGGTGACTTATTTGTATAAAATGTTATTTTGCCACATGAGACAGTAATAAAAGAAAGATTT
3601 TCACAGTAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gucuuAGGA----ACGGACCCACg 5'
               ||:|    | |||||||| 
Target 5' gcagcTCTTAAGGTTCCTGGGTGc 3'
 377 - 400 149.00 -19.90
2 
miRNA  3' gucuuaggaacgGACCCACg 5'
                      ||||||| 
Target 5' ctaatgtacaaaCTGGGTGa 3'
 3042 - 3061 140.00 -13.00
3 
miRNA  3' gucUUA--GGAACGGACCCACg 5'
             |:|  |||||  |||||| 
Target 5' agcAGTTACCTTG--TGGGTGa 3'
 2493 - 2512 130.00 -19.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN18736967 17 COSMIC
COSN7313428 34 COSMIC
COSN31507309 36 COSMIC
COSN31582055 48 COSMIC
COSN31612316 54 COSMIC
COSN30149701 58 COSMIC
COSN30711517 77 COSMIC
COSN31557960 175 COSMIC
COSN31526294 182 COSMIC
COSN26720505 371 COSMIC
COSN31881880 374 COSMIC
COSN16114360 714 COSMIC
COSN17078374 1089 COSMIC
COSN10099404 1266 COSMIC
COSN31530192 1747 COSMIC
COSN31596361 1877 COSMIC
COSN1560051 2011 COSMIC
COSN7313430 2457 COSMIC
COSN15979247 2527 COSMIC
COSN5932672 2890 COSMIC
COSN20110220 3114 COSMIC
COSN30540491 3205 COSMIC
COSN8698048 3216 COSMIC
COSN28184091 3218 COSMIC
COSN31482089 3231 COSMIC
COSN28185898 3343 COSMIC
COSN26107386 3605 COSMIC
rs3752531 17 GWAS
rs78686363 149 GWAS
rs2066938 2781 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1055130792 6 dbSNP
rs776491799 7 dbSNP
rs747915739 9 dbSNP
rs769596633 10 dbSNP
rs773044089 11 dbSNP
rs779329040 14 dbSNP
rs3752531 17 dbSNP
rs1446146295 18 dbSNP
rs773717575 22 dbSNP
rs1011750206 25 dbSNP
rs1246407546 26 dbSNP
rs946285712 27 dbSNP
rs1021782546 28 dbSNP
rs1189534400 29 dbSNP
rs761257123 31 dbSNP
rs1352322195 32 dbSNP
rs764439356 35 dbSNP
rs373333532 36 dbSNP
rs1423903007 37 dbSNP
rs565266042 38 dbSNP
rs1178218322 39 dbSNP
rs1215081784 40 dbSNP
rs890786169 41 dbSNP
rs1270090644 42 dbSNP
rs1434099131 44 dbSNP
rs1254409155 46 dbSNP
rs1450398138 48 dbSNP
rs376819686 49 dbSNP
rs765555274 50 dbSNP
rs1289754803 55 dbSNP
rs960714159 58 dbSNP
rs1302248709 63 dbSNP
rs376031980 68 dbSNP
rs1345384568 69 dbSNP
rs764998621 104 dbSNP
rs1305778585 108 dbSNP
rs899680501 114 dbSNP
rs1330478764 120 dbSNP
rs1318838311 126 dbSNP
rs550343511 135 dbSNP
rs1382431674 137 dbSNP
rs1026367284 139 dbSNP
rs780316049 140 dbSNP
rs1397612427 141 dbSNP
rs1054564832 142 dbSNP
rs984706062 143 dbSNP
rs1453226645 147 dbSNP
rs78686363 149 dbSNP
rs1248489074 151 dbSNP
rs982692889 152 dbSNP
rs867607087 156 dbSNP
rs1216313404 158 dbSNP
rs974543861 159 dbSNP
rs923397278 168 dbSNP
rs696335 170 dbSNP
rs1344332916 174 dbSNP
rs971353805 178 dbSNP
rs1053131859 180 dbSNP
rs143118055 181 dbSNP
rs891782779 181 dbSNP
rs1297408664 182 dbSNP
rs1415138049 183 dbSNP
rs1393494729 186 dbSNP
rs879079391 194 dbSNP
rs777036303 196 dbSNP
rs530139778 210 dbSNP
rs550257165 211 dbSNP
rs906095971 212 dbSNP
rs563762346 213 dbSNP
rs1371812590 216 dbSNP
rs1193428374 229 dbSNP
rs112437383 231 dbSNP
rs552581349 237 dbSNP
rs990359047 243 dbSNP
rs565867894 245 dbSNP
rs1273877967 251 dbSNP
rs1026021450 257 dbSNP
rs1337416887 258 dbSNP
rs950347814 260 dbSNP
rs946337735 265 dbSNP
rs1006168777 267 dbSNP
rs1233699958 269 dbSNP
rs1041919527 273 dbSNP
rs1324716124 274 dbSNP
rs890797437 280 dbSNP
rs1446908597 284 dbSNP
rs149912870 290 dbSNP
rs372430072 291 dbSNP
rs569954315 292 dbSNP
rs1407668877 301 dbSNP
rs974604285 307 dbSNP
rs1338541601 316 dbSNP
rs923062108 317 dbSNP
rs553579635 321 dbSNP
rs989299683 322 dbSNP
rs1335462626 325 dbSNP
rs913264593 331 dbSNP
rs1213127029 336 dbSNP
rs1251270269 338 dbSNP
rs995645113 343 dbSNP
rs947403752 356 dbSNP
rs536841564 358 dbSNP
rs1336835132 365 dbSNP
rs773002223 367 dbSNP
rs556688340 369 dbSNP
rs1057336005 376 dbSNP
rs971401229 381 dbSNP
rs1439406318 385 dbSNP
rs762803964 386 dbSNP
rs1375434701 389 dbSNP
rs1461433706 393 dbSNP
rs1325992259 415 dbSNP
rs1462485298 424 dbSNP
rs895972142 426 dbSNP
rs1397302927 428 dbSNP
rs981494656 429 dbSNP
rs1405095743 430 dbSNP
rs576508675 439 dbSNP
rs1179110558 445 dbSNP
rs958859161 448 dbSNP
rs374599118 453 dbSNP
rs552900037 454 dbSNP
rs1469797568 458 dbSNP
rs1271148369 467 dbSNP
rs192048514 468 dbSNP
rs183373729 469 dbSNP
rs964630571 470 dbSNP
rs573388192 481 dbSNP
rs696336 482 dbSNP
rs1232641918 484 dbSNP
rs1442428073 485 dbSNP
rs561331989 495 dbSNP
rs377665659 502 dbSNP
rs954682580 506 dbSNP
rs1436224804 514 dbSNP
rs988633587 515 dbSNP
rs1161715514 521 dbSNP
rs913338308 524 dbSNP
rs868605802 525 dbSNP
rs559032940 527 dbSNP
rs978740813 527 dbSNP
rs575017064 532 dbSNP
rs1238465025 533 dbSNP
rs886943232 533 dbSNP
rs1004019909 535 dbSNP
rs1486153020 538 dbSNP
rs1046250332 541 dbSNP
rs760806828 562 dbSNP
rs927291383 568 dbSNP
rs1280549751 573 dbSNP
rs1414958619 585 dbSNP
rs1345046737 586 dbSNP
rs1299829525 588 dbSNP
rs1458372166 596 dbSNP
rs1219215656 611 dbSNP
rs937649995 616 dbSNP
rs1291040206 622 dbSNP
rs1158711136 629 dbSNP
rs1383773746 631 dbSNP
rs544027803 638 dbSNP
rs1436663138 654 dbSNP
rs575130212 655 dbSNP
rs917456123 656 dbSNP
rs1376063327 660 dbSNP
rs1175435658 664 dbSNP
rs1398642463 666 dbSNP
rs371451646 669 dbSNP
rs188386615 674 dbSNP
rs144940361 691 dbSNP
rs1011665786 697 dbSNP
rs752356557 704 dbSNP
rs552617415 709 dbSNP
rs1291374998 710 dbSNP
rs1254951064 714 dbSNP
rs886190933 718 dbSNP
rs1005939588 719 dbSNP
rs559655091 727 dbSNP
rs1321662705 731 dbSNP
rs1298302980 733 dbSNP
rs1217193977 734 dbSNP
rs1340213417 737 dbSNP
rs1294283820 738 dbSNP
rs912713464 741 dbSNP
rs1037405514 748 dbSNP
rs191278145 749 dbSNP
rs1202441680 750 dbSNP
rs996132078 757 dbSNP
rs114690281 759 dbSNP
rs1356229767 764 dbSNP
rs76903321 767 dbSNP
rs1010488244 769 dbSNP
rs1020041735 771 dbSNP
rs1477376503 777 dbSNP
rs1418394302 779 dbSNP
rs1189772233 781 dbSNP
rs968809480 787 dbSNP
rs754277092 789 dbSNP
rs1485562909 795 dbSNP
rs1177296231 797 dbSNP
rs978814445 804 dbSNP
rs1034338929 808 dbSNP
rs1481292986 810 dbSNP
rs958946490 811 dbSNP
rs1209285242 822 dbSNP
rs1247405362 823 dbSNP
rs1254587998 823 dbSNP
rs920947518 823 dbSNP
rs1338960705 825 dbSNP
rs992812590 831 dbSNP
rs760358056 837 dbSNP
rs182422380 847 dbSNP
rs1468245966 848 dbSNP
rs879540452 853 dbSNP
rs879613785 867 dbSNP
rs930202350 869 dbSNP
rs1173989308 873 dbSNP
rs1166868642 882 dbSNP
rs1456153006 884 dbSNP
rs1375770114 887 dbSNP
rs982955689 888 dbSNP
rs910042902 896 dbSNP
rs1367538983 898 dbSNP
rs536877010 903 dbSNP
rs1420495876 912 dbSNP
rs1310920809 920 dbSNP
rs941797839 928 dbSNP
rs939732788 932 dbSNP
rs1037437090 934 dbSNP
rs765529607 935 dbSNP
rs1254136167 936 dbSNP
rs906355164 938 dbSNP
rs1354617479 939 dbSNP
rs1265090368 940 dbSNP
rs931659446 942 dbSNP
rs1391947852 944 dbSNP
rs1306347302 952 dbSNP
rs1002133046 955 dbSNP
rs146637109 962 dbSNP
rs1055411033 963 dbSNP
rs1235632027 969 dbSNP
rs1325377657 992 dbSNP
rs1051396027 994 dbSNP
rs1158914304 997 dbSNP
rs548041144 997 dbSNP
rs1378067691 1004 dbSNP
rs1021570663 1010 dbSNP
rs1454298090 1016 dbSNP
rs1396225408 1026 dbSNP
rs890375549 1029 dbSNP
rs1450393079 1046 dbSNP
rs967460683 1051 dbSNP
rs570230813 1057 dbSNP
rs1277275387 1058 dbSNP
rs1020111655 1066 dbSNP
rs539119983 1070 dbSNP
rs1019776405 1072 dbSNP
rs1481227613 1078 dbSNP
rs965895434 1088 dbSNP
rs80091642 1091 dbSNP
rs1028969254 1095 dbSNP
rs1034407541 1100 dbSNP
rs758854634 1103 dbSNP
rs952979511 1104 dbSNP
rs983811751 1111 dbSNP
rs1395307916 1118 dbSNP
rs566420526 1125 dbSNP
rs1318774321 1136 dbSNP
rs1401578385 1140 dbSNP
rs1358261312 1144 dbSNP
rs958796663 1145 dbSNP
rs535093535 1159 dbSNP
rs1434803815 1160 dbSNP
rs1396431155 1161 dbSNP
rs1170284748 1197 dbSNP
rs186657913 1203 dbSNP
rs1477355630 1206 dbSNP
rs1377519533 1214 dbSNP
rs1194371922 1218 dbSNP
rs879776777 1227 dbSNP
rs1478973494 1236 dbSNP
rs1453485358 1238 dbSNP
rs867835420 1241 dbSNP
rs1486111748 1242 dbSNP
rs1280883516 1243 dbSNP
rs1374627767 1243 dbSNP
rs1462398556 1249 dbSNP
rs1297563574 1251 dbSNP
rs1344263908 1261 dbSNP
rs555287337 1262 dbSNP
rs1394354305 1264 dbSNP
rs752084222 1279 dbSNP
rs1338065155 1294 dbSNP
rs1277328128 1296 dbSNP
rs981822754 1302 dbSNP
rs755433288 1308 dbSNP
rs910075699 1312 dbSNP
rs1331661696 1316 dbSNP
rs927820458 1318 dbSNP
rs535708488 1325 dbSNP
rs549271164 1326 dbSNP
rs779412535 1327 dbSNP
rs1421997765 1330 dbSNP
rs937817371 1337 dbSNP
rs1326730567 1340 dbSNP
rs975555477 1345 dbSNP
rs191257822 1349 dbSNP
rs577435214 1352 dbSNP
rs1239393459 1353 dbSNP
rs1185544775 1361 dbSNP
rs931714916 1367 dbSNP
rs1275163968 1372 dbSNP
rs1300220341 1380 dbSNP
rs1308466623 1388 dbSNP
rs1273637513 1390 dbSNP
rs764099126 1392 dbSNP
rs546240383 1393 dbSNP
rs893745764 1401 dbSNP
rs946619283 1406 dbSNP
rs1043080767 1408 dbSNP
rs1380915365 1415 dbSNP
rs1250128968 1428 dbSNP
rs1282006028 1429 dbSNP
rs1359152277 1434 dbSNP
rs1446658595 1436 dbSNP
rs903185957 1440 dbSNP
rs1019617972 1441 dbSNP
rs998904141 1441 dbSNP
rs1398694694 1443 dbSNP
rs1051899488 1444 dbSNP
rs997452707 1445 dbSNP
rs890124631 1446 dbSNP
rs755177777 1460 dbSNP
rs781409500 1461 dbSNP
rs1180565098 1471 dbSNP
rs1456419827 1484 dbSNP
rs1237439477 1485 dbSNP
rs1214108781 1486 dbSNP
rs1323219710 1486 dbSNP
rs1287462488 1487 dbSNP
rs1227438930 1490 dbSNP
rs1350910662 1494 dbSNP
rs1263525798 1498 dbSNP
rs953115960 1501 dbSNP
rs1375359505 1507 dbSNP
rs1041602196 1510 dbSNP
rs1428914477 1512 dbSNP
rs559584006 1514 dbSNP
rs747856456 1519 dbSNP
rs904418364 1519 dbSNP
rs1321977607 1528 dbSNP
rs796494995 1535 dbSNP
rs696337 1546 dbSNP
rs529720472 1552 dbSNP
rs183421410 1553 dbSNP
rs1393871811 1559 dbSNP
rs1014335429 1562 dbSNP
rs769992662 1563 dbSNP
rs1015275370 1567 dbSNP
rs1024767196 1571 dbSNP
rs1322819406 1579 dbSNP
rs1447250612 1582 dbSNP
rs951395801 1583 dbSNP
rs1004497152 1585 dbSNP
rs1237343946 1589 dbSNP
rs376960404 1594 dbSNP
rs1352252571 1603 dbSNP
rs1017210240 1605 dbSNP
rs962916369 1608 dbSNP
rs1370337657 1610 dbSNP
rs1273487603 1619 dbSNP
rs1382002009 1625 dbSNP
rs975586479 1626 dbSNP
rs981873755 1636 dbSNP
rs1293957013 1638 dbSNP
rs1361422407 1645 dbSNP
rs1300197449 1652 dbSNP
rs61229807 1660 dbSNP
rs937764719 1661 dbSNP
rs953288512 1663 dbSNP
rs1434877504 1669 dbSNP
rs188705633 1678 dbSNP
rs1190428232 1680 dbSNP
rs911574399 1694 dbSNP
rs945726741 1695 dbSNP
rs1041338682 1703 dbSNP
rs1211376218 1712 dbSNP
rs925877842 1717 dbSNP
rs1487750074 1725 dbSNP
rs1042253414 1726 dbSNP
rs770688954 1730 dbSNP
rs934639394 1731 dbSNP
rs1299760156 1733 dbSNP
rs1041148040 1735 dbSNP
rs147528763 1739 dbSNP
rs1341592717 1742 dbSNP
rs7134219 1743 dbSNP
rs1486029552 1750 dbSNP
rs1056068887 1751 dbSNP
rs1280471372 1764 dbSNP
rs1398435762 1766 dbSNP
rs894307601 1771 dbSNP
rs774310734 1776 dbSNP
rs76659878 1777 dbSNP
rs996937900 1779 dbSNP
rs696338 1795 dbSNP
rs1425581354 1799 dbSNP
rs1466073330 1799 dbSNP
rs1191213297 1800 dbSNP
rs112701930 1801 dbSNP
rs1256377322 1811 dbSNP
rs1183122246 1818 dbSNP
rs1481949399 1819 dbSNP
rs1254895635 1824 dbSNP
rs1005808617 1826 dbSNP
rs1015828547 1827 dbSNP
rs1016910984 1828 dbSNP
rs1217138674 1830 dbSNP
rs193181694 1832 dbSNP
rs1317540791 1834 dbSNP
rs1313634806 1837 dbSNP
rs1459943873 1838 dbSNP
rs962988214 1839 dbSNP
rs775003560 1847 dbSNP
rs1003237251 1856 dbSNP
rs1034675925 1857 dbSNP
rs1453383807 1860 dbSNP
rs145117768 1872 dbSNP
rs569068929 1874 dbSNP
rs1377687975 1882 dbSNP
rs1464868261 1888 dbSNP
rs1368702666 1891 dbSNP
rs530901916 1892 dbSNP
rs535458131 1895 dbSNP
rs1354199198 1900 dbSNP
rs1178677939 1902 dbSNP
rs1458630976 1903 dbSNP
rs11065225 1905 dbSNP
rs568784990 1906 dbSNP
rs977998247 1912 dbSNP
rs911661410 1917 dbSNP
rs537711314 1921 dbSNP
rs1247334100 1923 dbSNP
rs967064145 1931 dbSNP
rs557599515 1932 dbSNP
rs56338110 1940 dbSNP
rs138940358 1941 dbSNP
rs763454839 1943 dbSNP
rs922619417 1949 dbSNP
rs1211421266 1950 dbSNP
rs141509775 1951 dbSNP
rs766848997 1954 dbSNP
rs150438359 1956 dbSNP
rs1456099106 1969 dbSNP
rs932734812 1976 dbSNP
rs1049794977 1981 dbSNP
rs915759636 1991 dbSNP
rs1256710849 1992 dbSNP
rs1474216196 1998 dbSNP
rs138209088 2005 dbSNP
rs1408863319 2007 dbSNP
rs1437746842 2010 dbSNP
rs1418684392 2011 dbSNP
rs755534650 2025 dbSNP
rs1037187594 2027 dbSNP
rs149574580 2029 dbSNP
rs1291254757 2030 dbSNP
rs1045950816 2033 dbSNP
rs897437297 2034 dbSNP
rs1397211053 2038 dbSNP
rs374372019 2054 dbSNP
rs940078521 2060 dbSNP
rs781138012 2064 dbSNP
rs867188484 2069 dbSNP
rs959038184 2076 dbSNP
rs80114141 2079 dbSNP
rs1389582414 2083 dbSNP
rs185250595 2084 dbSNP
rs1421132902 2089 dbSNP
rs997534692 2090 dbSNP
rs1028585569 2091 dbSNP
rs1022022118 2092 dbSNP
rs891346529 2094 dbSNP
rs1008395742 2096 dbSNP
rs1021047353 2097 dbSNP
rs1201499035 2101 dbSNP
rs967136337 2103 dbSNP
rs367948507 2111 dbSNP
rs923772901 2122 dbSNP
rs564028736 2123 dbSNP
rs147232207 2124 dbSNP
rs536726605 2132 dbSNP
rs1489379776 2140 dbSNP
rs767661922 2158 dbSNP
rs1233480530 2159 dbSNP
rs965968396 2161 dbSNP
rs1480358468 2165 dbSNP
rs977139960 2166 dbSNP
rs1032664202 2172 dbSNP
rs975989994 2175 dbSNP
rs546452841 2178 dbSNP
rs1344711429 2183 dbSNP
rs1278595075 2191 dbSNP
rs1401519243 2200 dbSNP
rs1397116260 2211 dbSNP
rs922595738 2213 dbSNP
rs957022571 2215 dbSNP
rs1414497516 2219 dbSNP
rs1403562614 2233 dbSNP
rs991534183 2234 dbSNP
rs1464982799 2238 dbSNP
rs915849081 2239 dbSNP
rs1429081461 2241 dbSNP
rs1194799174 2250 dbSNP
rs1478940697 2251 dbSNP
rs1393691358 2252 dbSNP
rs1192579235 2256 dbSNP
rs1055059 2258 dbSNP
rs1258342380 2265 dbSNP
rs1198717415 2267 dbSNP
rs981330700 2278 dbSNP
rs138935444 2282 dbSNP
rs1354547825 2287 dbSNP
rs1440827734 2294 dbSNP
rs548983767 2303 dbSNP
rs1328753942 2305 dbSNP
rs1315705624 2306 dbSNP
rs568821825 2308 dbSNP
rs1269170373 2309 dbSNP
rs1448133566 2316 dbSNP
rs898550718 2317 dbSNP
rs932685293 2319 dbSNP
rs1372691935 2322 dbSNP
rs1405936123 2326 dbSNP
rs941404899 2331 dbSNP
rs34280477 2334 dbSNP
rs1037244743 2337 dbSNP
rs1441234637 2340 dbSNP
rs1417642184 2346 dbSNP
rs537832980 2362 dbSNP
rs1342645097 2386 dbSNP
rs1216202527 2389 dbSNP
rs756312717 2393 dbSNP
rs551344728 2394 dbSNP
rs1202512916 2402 dbSNP
rs1238662672 2418 dbSNP
rs902672588 2420 dbSNP
rs1456232006 2425 dbSNP
rs894823548 2427 dbSNP
rs1255018007 2435 dbSNP
rs770776830 2442 dbSNP
rs1357987326 2443 dbSNP
rs1281953057 2448 dbSNP
rs1011887946 2458 dbSNP
rs1469042944 2459 dbSNP
rs998591646 2460 dbSNP
rs1382709223 2470 dbSNP
rs1332552389 2471 dbSNP
rs778663039 2505 dbSNP
rs1449645614 2511 dbSNP
rs1353179943 2512 dbSNP
rs1328576545 2516 dbSNP
rs142855063 2518 dbSNP
rs540059883 2526 dbSNP
rs147410044 2527 dbSNP
rs59385917 2529 dbSNP
rs1476596279 2535 dbSNP
rs1023045617 2541 dbSNP
rs971378958 2547 dbSNP
rs981746704 2551 dbSNP
rs1380851947 2553 dbSNP
rs573311775 2559 dbSNP
rs908402706 2564 dbSNP
rs1180508945 2566 dbSNP
rs1437737242 2578 dbSNP
rs939847150 2584 dbSNP
rs1221974622 2589 dbSNP
rs1452990955 2594 dbSNP
rs1419405641 2599 dbSNP
rs1408762519 2604 dbSNP
rs965866187 2606 dbSNP
rs1221097697 2612 dbSNP
rs1167876172 2617 dbSNP
rs1243012270 2623 dbSNP
rs1310795391 2623 dbSNP
rs190104967 2626 dbSNP
rs535534508 2629 dbSNP
rs973877251 2638 dbSNP
rs555352322 2643 dbSNP
rs555348338 2646 dbSNP
rs575273750 2650 dbSNP
rs932692140 2657 dbSNP
rs1301457232 2665 dbSNP
rs1028880072 2674 dbSNP
rs1329074651 2680 dbSNP
rs1049788411 2699 dbSNP
rs1398909977 2701 dbSNP
rs912553837 2703 dbSNP
rs944328571 2704 dbSNP
rs1042608357 2711 dbSNP
rs1191569043 2719 dbSNP
rs1266501905 2720 dbSNP
rs1478847393 2720 dbSNP
rs1198308994 2721 dbSNP
rs1488400241 2725 dbSNP
rs985500110 2727 dbSNP
rs1270610843 2729 dbSNP
rs909883658 2730 dbSNP
rs111300193 2731 dbSNP
rs1001006806 2745 dbSNP
rs1216766101 2747 dbSNP
rs1275074478 2759 dbSNP
rs972781077 2768 dbSNP
rs564065680 2769 dbSNP
rs918763613 2773 dbSNP
rs1053843983 2775 dbSNP
rs771925476 2777 dbSNP
rs2066938 2781 dbSNP
rs1449010162 2783 dbSNP
rs1057132299 2785 dbSNP
rs1301486686 2791 dbSNP
rs1341331593 2797 dbSNP
rs1300136942 2805 dbSNP
rs895429307 2807 dbSNP
rs372192283 2809 dbSNP
rs540438111 2811 dbSNP
rs1427002497 2813 dbSNP
rs903495061 2816 dbSNP
rs1175404840 2821 dbSNP
rs999232192 2827 dbSNP
rs1190729207 2832 dbSNP
rs1184273023 2836 dbSNP
rs560061031 2842 dbSNP
rs538861980 2848 dbSNP
rs1211514100 2849 dbSNP
rs971456640 2852 dbSNP
rs866450269 2859 dbSNP
rs1318886750 2861 dbSNP
rs1015537080 2868 dbSNP
rs1380737632 2876 dbSNP
rs1361430830 2879 dbSNP
rs1303475695 2880 dbSNP
rs1402137980 2887 dbSNP
rs984700910 2894 dbSNP
rs1335867128 2903 dbSNP
rs1465893799 2911 dbSNP
rs1425333804 2913 dbSNP
rs1167966557 2914 dbSNP
rs1427545586 2922 dbSNP
rs768023736 2940 dbSNP
rs1183069025 2941 dbSNP
rs139701993 2964 dbSNP
rs919748695 2965 dbSNP
rs972833352 2968 dbSNP
rs2239757 2971 dbSNP
rs761546337 2975 dbSNP
rs939420546 2979 dbSNP
rs1225581429 2999 dbSNP
rs992362237 3004 dbSNP
rs1313569928 3010 dbSNP
rs1356085079 3026 dbSNP
rs1316127572 3030 dbSNP
rs1380509553 3038 dbSNP
rs1218162082 3039 dbSNP
rs1335929304 3048 dbSNP
rs1447421852 3053 dbSNP
rs985932118 3056 dbSNP
rs562568916 3060 dbSNP
rs79516342 3065 dbSNP
rs948338144 3075 dbSNP
rs1461211736 3087 dbSNP
rs944051244 3090 dbSNP
rs1283948850 3091 dbSNP
rs1487521981 3092 dbSNP
rs142613584 3095 dbSNP
rs565711298 3096 dbSNP
rs1367298092 3120 dbSNP
rs753040876 3123 dbSNP
rs544375610 3130 dbSNP
rs1042346940 3134 dbSNP
rs150548997 3138 dbSNP
rs1266201386 3139 dbSNP
rs1364756082 3145 dbSNP
rs774790193 3147 dbSNP
rs1050313365 3148 dbSNP
rs888915942 3153 dbSNP
rs1314451534 3165 dbSNP
rs1157172963 3175 dbSNP
rs539719216 3187 dbSNP
rs1337433686 3196 dbSNP
rs936891662 3204 dbSNP
rs1304645524 3208 dbSNP
rs1274148785 3209 dbSNP
rs1368485232 3210 dbSNP
rs1053918992 3211 dbSNP
rs1055070 3214 dbSNP
rs962718777 3215 dbSNP
rs1386154824 3222 dbSNP
rs768019190 3225 dbSNP
rs1158690595 3226 dbSNP
rs1044550720 3230 dbSNP
rs753121187 3231 dbSNP
rs1180125795 3240 dbSNP
rs1418797081 3244 dbSNP
rs566913366 3251 dbSNP
rs1266474970 3262 dbSNP
rs1328697468 3271 dbSNP
rs1352133581 3282 dbSNP
rs756256924 3283 dbSNP
rs746623626 3286 dbSNP
rs1217385848 3290 dbSNP
rs992618397 3302 dbSNP
rs1258818525 3303 dbSNP
rs1332228313 3312 dbSNP
rs1238231961 3321 dbSNP
rs1015232798 3324 dbSNP
rs536036417 3325 dbSNP
rs1337632161 3326 dbSNP
rs961316820 3353 dbSNP
rs1402760600 3360 dbSNP
rs1344431560 3364 dbSNP
rs1239965236 3378 dbSNP
rs995422908 3379 dbSNP
rs1401237330 3380 dbSNP
rs1026846284 3384 dbSNP
rs1387783627 3385 dbSNP
rs1157407106 3391 dbSNP
rs1453658488 3401 dbSNP
rs1268392962 3409 dbSNP
rs1378627630 3409 dbSNP
rs138947126 3409 dbSNP
rs979665991 3409 dbSNP
rs954001919 3417 dbSNP
rs985284292 3418 dbSNP
rs1236941248 3423 dbSNP
rs1259722530 3428 dbSNP
rs139491437 3429 dbSNP
rs1052086762 3436 dbSNP
rs1199275862 3441 dbSNP
rs2071708 3443 dbSNP
rs978071928 3445 dbSNP
rs1278362324 3451 dbSNP
rs1229152390 3453 dbSNP
rs1324234071 3454 dbSNP
rs537880908 3456 dbSNP
rs1407431536 3460 dbSNP
rs1339136073 3469 dbSNP
rs933094744 3473 dbSNP
rs1429019675 3477 dbSNP
rs1171724034 3478 dbSNP
rs1476499027 3484 dbSNP
rs557696124 3486 dbSNP
rs888974638 3487 dbSNP
rs34453952 3488 dbSNP
rs1244833270 3491 dbSNP
rs1237173122 3497 dbSNP
rs1460758658 3509 dbSNP
rs936947668 3512 dbSNP
rs1037527175 3516 dbSNP
rs1175244156 3521 dbSNP
rs1395488888 3522 dbSNP
rs1433968400 3528 dbSNP
rs1337010274 3532 dbSNP
rs1269113676 3534 dbSNP
rs1170761195 3537 dbSNP
rs990124844 3538 dbSNP
rs577889496 3548 dbSNP
rs993412615 3551 dbSNP
rs1025678155 3552 dbSNP
rs960951972 3569 dbSNP
rs1013688514 3571 dbSNP
rs1024110292 3573 dbSNP
rs1328345109 3575 dbSNP
rs1445242996 3588 dbSNP
rs764074770 3592 dbSNP
rs969430528 3593 dbSNP
rs754114552 3595 dbSNP
rs1238605281 3597 dbSNP
rs1304577489 3603 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 84747.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gucuuaggaACGGACCCACg 5'
                   | |||||||| 
Target 5' -------ggUUCCUGGGUGc 3'
 		1 - 13
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000344651.4 | 3UTR | GGUUCCUGGGUGCUGUGGGAAGCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
172 hsa-miR-500b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059905 HDGF heparin binding growth factor 2 4
MIRT235394 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 2 4
MIRT442246 PYGO1 pygopus family PHD finger 1 2 2
MIRT443591 ZNF439 zinc finger protein 439 2 4
MIRT453280 EFTUD2 elongation factor Tu GTP binding domain containing 2 2 2
MIRT463540 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT465589 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT469462 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT485449 KCTD15 potassium channel tetramerization domain containing 15 2 4
MIRT486682 WDR81 WD repeat domain 81 2 2
MIRT489078 POLM DNA polymerase mu 2 2
MIRT493734 GREM2 gremlin 2, DAN family BMP antagonist 2 2
MIRT494872 DYNLL2 dynein light chain LC8-type 2 2 2
MIRT496130 RNF103-CHMP3 RNF103-CHMP3 readthrough 2 2
MIRT496489 CHMP3 charged multivesicular body protein 3 2 2
MIRT496924 CLMN calmin 2 2
MIRT497297 TMEM119 transmembrane protein 119 2 2
MIRT499103 AGRN agrin 2 2
MIRT508979 CXorf38 chromosome X open reading frame 38 2 2
MIRT509911 NIPAL1 NIPA like domain containing 1 2 2
MIRT512820 ARRDC2 arrestin domain containing 2 2 4
MIRT512827 KBTBD6 kelch repeat and BTB domain containing 6 2 4
MIRT515360 MRPL52 mitochondrial ribosomal protein L52 2 2
MIRT516610 TRIM58 tripartite motif containing 58 2 2
MIRT517053 TLDC1 TBC/LysM-associated domain containing 1 2 2
MIRT517637 ZNF491 zinc finger protein 491 2 2
MIRT518270 LEAP2 liver enriched antimicrobial peptide 2 2 2
MIRT518625 STAR steroidogenic acute regulatory protein 2 2
MIRT518887 N4BP2L2 NEDD4 binding protein 2 like 2 2 2
MIRT519026 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT520365 UBE2G2 ubiquitin conjugating enzyme E2 G2 2 2
MIRT521106 SLC1A5 solute carrier family 1 member 5 2 2
MIRT521943 PHC3 polyhomeotic homolog 3 2 2
MIRT522253 NPEPPS aminopeptidase puromycin sensitive 2 2
MIRT522853 KIAA1551 KIAA1551 2 2
MIRT522868 KIAA1549 KIAA1549 2 2
MIRT524207 DDX19B DEAD-box helicase 19B 2 2
MIRT526004 ARHGAP27 Rho GTPase activating protein 27 2 2
MIRT527769 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT527827 TMEM74B transmembrane protein 74B 2 2
MIRT527861 SMOC1 SPARC related modular calcium binding 1 2 2
MIRT528040 WT1 Wilms tumor 1 2 2
MIRT529802 ZDHHC8 zinc finger DHHC-type containing 8 2 2
MIRT531723 TARS threonyl-tRNA synthetase 2 2
MIRT531996 BARD1 BRCA1 associated RING domain 1 2 2
MIRT533338 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT533621 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT533652 TMOD2 tropomodulin 2 2 2
MIRT534397 SENP3 SUMO1/sentrin/SMT3 specific peptidase 3 2 2
MIRT538686 CCDC80 coiled-coil domain containing 80 2 2
MIRT540444 RBM43 RNA binding motif protein 43 2 2
MIRT542586 ZC3H12C zinc finger CCCH-type containing 12C 2 8
MIRT542796 PLEKHA3 pleckstrin homology domain containing A3 2 4
MIRT542991 ERC1 ELKS/RAB6-interacting/CAST family member 1 2 2
MIRT544424 ZNF460 zinc finger protein 460 2 4
MIRT545740 ESF1 ESF1 nucleolar pre-rRNA processing protein homolog 2 4
MIRT552618 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT554456 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT569663 PRIM1 DNA primase subunit 1 2 2
MIRT569924 PCSK9 proprotein convertase subtilisin/kexin type 9 2 2
MIRT570140 IL1RL2 interleukin 1 receptor like 2 2 2
MIRT573558 TMEM120B transmembrane protein 120B 2 2
MIRT574282 OPRD1 opioid receptor delta 1 2 2
MIRT575335 Fbxo6 F-box protein 6 2 2
MIRT607057 IDS iduronate 2-sulfatase 2 2
MIRT607078 POM121L7 POM121 transmembrane nucleoporin like 7 pseudogene 2 2
MIRT607500 HEBP2 heme binding protein 2 2 2
MIRT607530 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT607808 RHBDL2 rhomboid like 2 2 2
MIRT608079 ZFP14 ZFP14 zinc finger protein 2 2
MIRT609119 NUDT3 nudix hydrolase 3 2 2
MIRT609745 PTCH1 patched 1 2 2
MIRT612904 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 2 2
MIRT618720 PCSK2 proprotein convertase subtilisin/kexin type 2 2 2
MIRT618778 HLA-E major histocompatibility complex, class I, E 2 2
MIRT619015 SLC2A6 solute carrier family 2 member 6 2 2
MIRT623223 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 2
MIRT623819 GEMIN6 gem nuclear organelle associated protein 6 2 2
MIRT625704 OPTN optineurin 2 2
MIRT626437 CHDH choline dehydrogenase 2 2
MIRT628087 KAT7 lysine acetyltransferase 7 2 2
MIRT628936 APOB apolipoprotein B 2 2
MIRT633543 PGBD5 piggyBac transposable element derived 5 2 2
MIRT634348 SGOL1 shugoshin 1 2 2
MIRT634611 KIAA1919 major facilitator superfamily domain containing 4B 2 2
MIRT635243 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT636681 BTLA B and T lymphocyte associated 2 2
MIRT636923 ZNF845 zinc finger protein 845 2 2
MIRT637606 ZNF554 zinc finger protein 554 2 2
MIRT639242 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT640835 POLR3A RNA polymerase III subunit A 2 2
MIRT642098 FBXL2 F-box and leucine rich repeat protein 2 2 2
MIRT643087 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT643934 C17orf104 meiosis specific with coiled-coil domain 2 2
MIRT644353 FXN frataxin 2 2
MIRT645628 SF3A3 splicing factor 3a subunit 3 2 2
MIRT645754 FAM213A family with sequence similarity 213 member A 2 2
MIRT646329 MVB12B multivesicular body subunit 12B 2 2
MIRT646817 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT647019 ADCY2 adenylate cyclase 2 2 2
MIRT647621 IGSF9B immunoglobulin superfamily member 9B 2 2
MIRT648517 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT648871 ABCA6 ATP binding cassette subfamily A member 6 2 2
MIRT649620 ITPKC inositol-trisphosphate 3-kinase C 2 2
MIRT650062 CCDC134 coiled-coil domain containing 134 2 2
MIRT650734 TNFSF8 TNF superfamily member 8 2 2
MIRT652389 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT654352 RBM27 RNA binding motif protein 27 2 2
MIRT655796 NOVA2 NOVA alternative splicing regulator 2 2 2
MIRT657329 HNRNPK heterogeneous nuclear ribonucleoprotein K 2 2
MIRT657734 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT660613 ANO6 anoctamin 6 2 2
MIRT661243 ARL17B ADP ribosylation factor like GTPase 17B 2 2
MIRT662245 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662921 MED18 mediator complex subunit 18 2 2
MIRT662963 JPH2 junctophilin 2 2 2
MIRT663347 ZNF74 zinc finger protein 74 2 2
MIRT663528 MASTL microtubule associated serine/threonine kinase like 2 2
MIRT663547 CCR6 C-C motif chemokine receptor 6 2 2
MIRT663977 ZNF786 zinc finger protein 786 2 2
MIRT664084 METTL2B methyltransferase like 2B 2 2
MIRT664358 C16orf45 chromosome 16 open reading frame 45 2 2
MIRT664421 TIGD6 tigger transposable element derived 6 2 2
MIRT664476 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT664979 TDRD1 tudor domain containing 1 2 2
MIRT665128 PYCRL pyrroline-5-carboxylate reductase 3 2 2
MIRT666259 SLC31A1 solute carrier family 31 member 1 2 2
MIRT666321 SLC16A10 solute carrier family 16 member 10 2 2
MIRT666881 POLQ DNA polymerase theta 2 2
MIRT668469 FADS6 fatty acid desaturase 6 2 2
MIRT669554 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT669835 ISCA2 iron-sulfur cluster assembly 2 2 2
MIRT670185 CCDC142 coiled-coil domain containing 142 2 2
MIRT672020 PXMP4 peroxisomal membrane protein 4 2 2
MIRT672070 KIAA0930 KIAA0930 2 2
MIRT672475 RTTN rotatin 2 2
MIRT672851 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT673090 AK1 adenylate kinase 1 2 2
MIRT673581 KDELC2 KDEL motif containing 2 2 2
MIRT674586 SLC35B4 solute carrier family 35 member B4 2 2
MIRT675001 STRN3 striatin 3 2 2
MIRT679018 MTMR10 myotubularin related protein 10 2 2
MIRT679680 STAT3 signal transducer and activator of transcription 3 2 2
MIRT682833 FLG2 filaggrin family member 2 2 2
MIRT682886 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT683442 AP3B2 adaptor related protein complex 3 beta 2 subunit 2 2
MIRT687040 RNF115 ring finger protein 115 2 2
MIRT691957 RHOH ras homolog family member H 2 2
MIRT694625 ZFPM1 zinc finger protein, FOG family member 1 2 2
MIRT695637 SLC26A2 solute carrier family 26 member 2 2 2
MIRT697640 WRN Werner syndrome RecQ like helicase 2 2
MIRT702009 MIDN midnolin 2 2
MIRT702034 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
MIRT704789 CDK6 cyclin dependent kinase 6 2 2
MIRT705728 AMMECR1L AMMECR1 like 2 2
MIRT705879 ADM adrenomedullin 2 2
MIRT706220 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT708418 CERS4 ceramide synthase 4 2 2
MIRT709114 C3orf18 chromosome 3 open reading frame 18 2 2
MIRT709595 ITPA inosine triphosphatase 2 2
MIRT710945 MRPL45 mitochondrial ribosomal protein L45 2 2
MIRT712345 NLN neurolysin 2 2
MIRT712530 CYTH2 cytohesin 2 2 2
MIRT714019 ASCC1 activating signal cointegrator 1 complex subunit 1 2 2
MIRT717287 ARMC12 armadillo repeat containing 12 2 2
MIRT717733 FGF1 fibroblast growth factor 1 2 2
MIRT718083 CLIC5 chloride intracellular channel 5 2 2
MIRT718562 MUC20 mucin 20, cell surface associated 2 2
MIRT721639 MYLK3 myosin light chain kinase 3 2 2
MIRT722632 C8A complement C8 alpha chain 2 2
MIRT723177 CDCA4 cell division cycle associated 4 2 2
MIRT725523 FAM229B family with sequence similarity 229 member B 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-500b Methotrexate 126941 NSC740 approved resistant cell line (W1)
hsa-miR-500b-3p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-500b-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-500b-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-500b-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-500b-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-500b-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)

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