miRTarBase - #MIRT535107


—
pre-miRNA Information
pre-miRNA hsa-mir-6830   
Genomic Coordinates chr5: 132217849 - 132217918
Description Homo sapiens miR-6830 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6830-3p
Sequence 48| UGUCUUUCUUCUCUCCCUUGCAG |70
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs772425565 6 dbSNP
rs1223446041 11 dbSNP
rs771777520 13 dbSNP
rs1416751362 14 dbSNP
rs564286593 15 dbSNP
rs748409873 17 dbSNP
rs1297884779 20 dbSNP
Putative Targets

Gene Information
Gene Symbol PMEPA1   
Synonyms STAG1, TMEPAI
Description prostate transmembrane protein, androgen induced 1
Transcript NM_020182   
Other Transcripts NM_199169 , NM_199170 , NM_199171   
Expression
Putative miRNA Targets on PMEPA1
3'UTR of PMEPA1
(miRNA target sites are highlighted)		 
>PMEPA1|NM_020182|3'UTR
   1 GGTCCCCAGGGGGGCCGGGCTGGGGCTGCGTAGGTGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGA
  81 AGGCGGGGGGCGCAGCAACGCATCGTGTGGCCCTCCCCTCCCACCTCCCTGTGTATAAATATTTACATGTGATGTCTGGT
 161 CTGAATGCACAAGCTAAGAGAGCTTGCAAAAAAAAAAAGAAAAAAGAAAAAAAAAAACCACGTTTCTTTGTTGAGCTGTG
 241 TCTTGAAGGCAAAAGAAAAAAAATTTCTACAGTAGTCTTTCTTGTTTCTAGTTGAGCTGCGTGCGTGAATGCTTATTTTC
 321 TTTTGTTTATGATAATTTCACTTAACTTTAAAGACATATTTGCACAAAACCTTTGTTTAAAGATCTGCAATATTATATAT
 401 ATAAATATATATAAGATAAGAGAAACTGTATGTGCGAGGGCAGGAGTATTTTTGTATTAGAAGAGGCCTATTAAAAAAAA
 481 AAGTTGTTTTCTGAACTAGAAGAGGAAAAAAATGGCAATTTTTGAGTGCCAAGTCAGAAAGTGTGTATTACCTTGTAAAG
 561 AAAAAAATTACAAAGCAGGGGTTTAGAGTTATTTATATAAATGTTGAGATTTTGCACTATTTTTTAATATAAATATGTCA
 641 GTGCTTGCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGAATTTCAGAGTCGCCTGACGG
 721 CAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCCTTGGCCAGGAGCGGCGGGCTTTCCCGAGGGGCCACTGTCCCTGC
 801 AGAGTGGATGCTTCTGCCTAGTGACAGGTTATCACCACGTTATATATTCCCTACCGAAGGAGACACCTTTTCCCCCCTGA
 881 CCCAGAACAGCCTTTAAATCACAAGCAAAATAGGAAAGTTAACCACGGAGGCACCGAGTTCCAGGTAGTGGTTTTGCCTT
 961 TCCCAAAAATGAAAATAAACTGTTACCGAAGGAATTAGTTTTTCCTCTTCTTTTTTCCAACTGTGAAGGTCCCCGTGGGG
1041 TGGAGCATGGTGCCCCTCACAAGCCGCAGCGGCTGGTGCCCGGGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTC
1121 TCTGCAGGGCGCTTTGGTGGTTGTTCAGCTGGCTAAAGGTTCACCGGTGAAGGCAGGTGCGGTAACTGCCGCACTGGACC
1201 CTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCTGTCTGTTTCCCTTCACGGATCAATTCTCACTTAAGAGGCCAA
1281 TAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTCCCAGGATAGGTGAAAGGGTTAAAATGAGTAAAGCAGTTG
1361 AGCAAACACCAACCCGAGCTTCGGGCGCAGAATTCTTCACCTTCTCTTCCCCTTTCCATCTCCTTTCCCCGCGGAAACAA
1441 CGCTTCCCTTCTGGTGTGTCTGTTGATCTGTGTTTTCATTTACATCTCTCTTAGACTCCGCTCTTGTTCTCCAGGTTTTC
1521 ACCAGATAGATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGGCATGTGAGCGTAAATAGA
1601 GGTGACCAGAGGAGAGCATGAGGGGTGGGGCTTTGGGACCCACCGGGGCCAGTGGCTGGAGCTTGACGTCTTTCCTCCCC
1681 ATGGGGGTGGGAGGGCCCCCAGCTGGAAGAGCAGACTCCCAGCTGCTACCCCCTCCCTTCCCATGGGAGTGGCTTTCCAT
1761 TTTGGGCAGAATGCTGACTAGTAGACTAACATAAAAGATATAAAAGGCAATAACTATTGTTTGTGAGCAACTTTTTTATA
1841 ACTTCCAAAACAAAAACCTGAGCACAGTTTTGAAGTTCTAGCCACTCGAGCTCATGCATGTGAAACGTGTGCTTTACGAA
1921 GGTGGCAGCTGACAGACGTGGGCTCTGCATGCCGCCAGCCTAGTAGAAAGTTCTCGTTCATTGGCAACAGCAGAACCTGC
2001 CTCTCCGTGAAGTCGTCAGCCTAAAATTTGTTTCTCTCTTGAAGAGGATTCTTTGAAAAGGTCCTGCAGAGAAATCAGTA
2081 CAGGTTATCCCGAAAGGTACAAGGACGCACTTGTAAAGATGATTAAAACGTATCTTTCCTTTATGTGACGCGTCTCTAGT
2161 GCCTTACTGAAGAAGCAGTGACACTCCCGTCGCTCGGTGAGGACGTTCCCGGACAGTGCCTCACTCACCTGGGACTGGTA
2241 TCCCCTCCCAGGGTCCACCAAGGGCTCCTGCTTTTCAGACACCCCATCATCCTCGCGCGTCCTCACCCTGTCTCTACCAG
2321 GGAGGTGCCTAGCTTGGTGAGGTTACTCCTGCTCCTCCAACCTTTTTTTGCCAAGGTTTGTACACGACTCCCATCTAGGC
2401 TGAAAACCTAGAAGTGGACCTTGTGTGTGTGCATGGTGTCAGCCCAAAGCCAGGCTGAGACAGTCCTCATATCCTCTTGA
2481 GCCAAACTGTTTGGGTCTCGTTGCTTCATGGTATGGTCTGGATTTGTGGGAATGGCTTTGCGTGAGAAAGGGGAGGAGAG
2561 TGGTTGCTGCCCTCAGCCGGCTTGAGGACAGAGCCTGTCCCTCTCATGACAACTCAGTGTTGAAGCCCAGTGTCCTCAGC
2641 TTCATGTCCAGTGGATGGCAGAAGTTCATGGGGTAGTGGCCTCTCAAAGGCTGGGCGCATCCCAAGACAGCCAGCAGGTT
2721 GTCTCTGGAAACGACCAGAGTTAAGCTCTCGGCTTCTCTGCTGAGGGTGCACCCTTTCCTCTAGATGGTAGTTGTCACGT
2801 TATCTTTGAAAACTCTTGGACTGCTCCTGAGGAGGCCCTCTTTTCCAGTAGGAAGTTAGATGGGGGTTCTCAGAAGTGGC
2881 TGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTCAGAGAAGGCCGAGCGTGGCTTTCTCTA
2961 GCCTTGTCACTGTCTCCCTGCCTGTCAATCACCACCTTTCCTCCAGAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTT
3041 CTACACAGATTTCACAAATTGTGCTAAGAACCGTCCGTGTTCTCAGAAAGCCCAGTGTTTTTGCAAAGAATGAAAAGGGA
3121 CCCCATATGTAGCAAAAATCAGGGCTGGGGGAGAGCCGGGTTCATTCCCTGTCCTCATTGGTCGTCCCTATGAATTGTAC
3201 GTTTCAGAGAAATTTTTTTTCCTATGTGCAACACGAAGCTTCCAGAACCATAAAATATCCCGTCGATAAGGAAAGAAAAT
3281 GTCGTTGTTGTTGTTTTTCTGGAAACTGCTTGAAATCTTGCTGTACTATAGAGCTCAGAAGGACACAGCCCGTCCTCCCC
3361 TGCCTGCCTGATTCCATGGCTGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTGC
3441 AGCCCCATTTCCCAAGCTCTGTTCAAGTTAAACTTATGTAAGCTTTCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGC
3521 TGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGAAGAAACTGCTTGTTGTGTATCAGTAATCATTAGTGGCAA
3601 TGATGACATTCTGAAAAGCTGCAATACTTATACAATAAATTTTACAATTCTTTGGAATGAGAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaCGUUCCCUCUCUUCUUUCUGu 5'
            |::| | : ||: |||:||| 
Target 5' tgGTGACGTGCAGGTGAAGGACa 3'
 1552 - 1574 141.00 -12.50
2 
miRNA  3' gacgUUC-CCUCUCU-UCUUUCUGu 5'
              ||| |||| || ||:|||:| 
Target 5' ttagAAGAGGAGTGAGAGGAAGGCg 3'
 61 - 85 139.00 -19.40
3 
miRNA  3' gacGUUCCCUCUCUUCUUUCUGu 5'
             | |  |||   ||||:||| 
Target 5' gtaCTATAGAGCTCAGAAGGACa 3'
 3323 - 3345 136.00 -13.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30643803 9 COSMIC
COSN510092 26 COSMIC
COSN30159746 52 COSMIC
COSN24989965 55 COSMIC
COSN30586462 56 COSMIC
COSN31526965 57 COSMIC
COSN30586961 92 COSMIC
COSN17608215 100 COSMIC
COSN20116603 188 COSMIC
COSN31603477 197 COSMIC
COSN28634001 199 COSMIC
COSN30170933 204 COSMIC
COSN20116602 206 COSMIC
COSN31547391 226 COSMIC
COSN32058378 264 COSMIC
COSN1877560 270 COSMIC
COSN31549424 367 COSMIC
COSN30169879 444 COSMIC
COSN20116601 472 COSMIC
COSN28472945 506 COSMIC
COSN28785803 510 COSMIC
COSN9144603 580 COSMIC
COSN31522349 619 COSMIC
COSN31531224 632 COSMIC
COSN31490852 690 COSMIC
COSN31541971 698 COSMIC
COSN26052162 768 COSMIC
COSN31779327 781 COSMIC
COSN1251055 1077 COSMIC
COSN1251054 1161 COSMIC
COSN20116600 1281 COSMIC
COSN32058141 1295 COSMIC
COSN28001384 1409 COSMIC
COSN1877558 1790 COSMIC
COSN24877152 1797 COSMIC
COSN20116599 1892 COSMIC
COSN30538190 1991 COSMIC
COSN31544288 2007 COSMIC
COSN31548574 2044 COSMIC
COSN31547388 2051 COSMIC
COSN28648773 2064 COSMIC
COSN31566551 2071 COSMIC
COSN31572622 2107 COSMIC
COSN22885039 2203 COSMIC
COSN31540385 2248 COSMIC
COSN25925196 2314 COSMIC
COSN8611169 2329 COSMIC
COSN9144602 2469 COSMIC
COSN5446456 2584 COSMIC
COSN17279804 2763 COSMIC
COSN23881530 2890 COSMIC
COSN9144601 3183 COSMIC
COSN31959825 3336 COSMIC
COSN30163279 3541 COSMIC
COSN31543924 3650 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs962471860 8 dbSNP
rs764250056 9 dbSNP
rs369326786 10 dbSNP
rs767562938 11 dbSNP
rs759561916 12 dbSNP
rs985708301 13 dbSNP
rs1332248181 15 dbSNP
rs1361365258 17 dbSNP
rs1283210260 18 dbSNP
rs376576339 22 dbSNP
rs543293436 25 dbSNP
rs1013519258 28 dbSNP
rs1255086604 29 dbSNP
rs201645714 30 dbSNP
rs199697051 32 dbSNP
rs1382850605 34 dbSNP
rs1350650911 37 dbSNP
rs1317349018 41 dbSNP
rs200475925 41 dbSNP
rs1466482840 42 dbSNP
rs374827364 43 dbSNP
rs796110464 52 dbSNP
rs1216835016 53 dbSNP
rs1256086890 57 dbSNP
rs966709502 58 dbSNP
rs1292382928 68 dbSNP
rs1010919667 81 dbSNP
rs1309142705 84 dbSNP
rs574903284 85 dbSNP
rs1477226719 91 dbSNP
rs558195316 91 dbSNP
rs1002818085 95 dbSNP
rs1353563245 98 dbSNP
rs369710270 99 dbSNP
rs758750370 101 dbSNP
rs1283102033 105 dbSNP
rs906781569 107 dbSNP
rs1276676534 109 dbSNP
rs1046710798 112 dbSNP
rs1342024129 113 dbSNP
rs747567255 119 dbSNP
rs1296001936 123 dbSNP
rs1277717698 131 dbSNP
rs929558032 131 dbSNP
rs918233358 145 dbSNP
rs887883314 151 dbSNP
rs540306193 165 dbSNP
rs1190942794 168 dbSNP
rs1036703830 170 dbSNP
rs1478665960 176 dbSNP
rs1407583210 178 dbSNP
rs1191099208 180 dbSNP
rs1423622509 183 dbSNP
rs878918242 187 dbSNP
rs1159569640 188 dbSNP
rs1162766432 188 dbSNP
rs931818254 188 dbSNP
rs1360196138 191 dbSNP
rs538376088 192 dbSNP
rs941057540 193 dbSNP
rs976445249 198 dbSNP
rs1286449999 199 dbSNP
rs1435793044 199 dbSNP
rs200143843 199 dbSNP
rs571898181 199 dbSNP
rs935245456 201 dbSNP
rs1191837989 202 dbSNP
rs1487833345 203 dbSNP
rs923631647 204 dbSNP
rs1451697789 205 dbSNP
rs1220131337 206 dbSNP
rs368078179 206 dbSNP
rs764733297 206 dbSNP
rs1223598373 207 dbSNP
rs985310517 207 dbSNP
rs1438122783 208 dbSNP
rs1165247035 209 dbSNP
rs1449813658 211 dbSNP
rs1288477333 212 dbSNP
rs979107009 212 dbSNP
rs1195835839 213 dbSNP
rs954035241 213 dbSNP
rs1319440454 216 dbSNP
rs34747825 217 dbSNP
rs1023391538 218 dbSNP
rs1285624166 218 dbSNP
rs1375848714 218 dbSNP
rs752968841 218 dbSNP
rs754741398 218 dbSNP
rs761258625 218 dbSNP
rs922531015 218 dbSNP
rs1238055080 219 dbSNP
rs574497661 219 dbSNP
rs1275895710 220 dbSNP
rs1189974273 221 dbSNP
rs376471376 222 dbSNP
rs552923503 223 dbSNP
rs1472582879 230 dbSNP
rs1161600151 231 dbSNP
rs1425826119 234 dbSNP
rs1467165773 240 dbSNP
rs1340218996 241 dbSNP
rs1331981353 245 dbSNP
rs1275828219 246 dbSNP
rs536534774 252 dbSNP
rs1415415593 256 dbSNP
rs1335925282 258 dbSNP
rs966615049 261 dbSNP
rs576943081 264 dbSNP
rs1243574465 267 dbSNP
rs959160962 268 dbSNP
rs567610879 269 dbSNP
rs1218671742 277 dbSNP
rs1323528663 279 dbSNP
rs1466187382 284 dbSNP
rs1202607316 287 dbSNP
rs1035857337 301 dbSNP
rs1003558199 304 dbSNP
rs1185662327 307 dbSNP
rs958139780 309 dbSNP
rs1402623421 320 dbSNP
rs1034217677 323 dbSNP
rs1168791372 325 dbSNP
rs1169973907 325 dbSNP
rs1427510062 329 dbSNP
rs1477625105 329 dbSNP
rs1425544869 335 dbSNP
rs1174147299 340 dbSNP
rs1002363881 342 dbSNP
rs1310732234 344 dbSNP
rs1395193360 344 dbSNP
rs1476941556 349 dbSNP
rs1246029858 350 dbSNP
rs1277002468 353 dbSNP
rs1325271427 359 dbSNP
rs567030253 360 dbSNP
rs1257000370 370 dbSNP
rs550894847 370 dbSNP
rs530894360 371 dbSNP
rs7351122 387 dbSNP
rs887747672 395 dbSNP
rs536323238 396 dbSNP
rs898089315 397 dbSNP
rs1323842311 401 dbSNP
rs1036693883 403 dbSNP
rs1200945472 404 dbSNP
rs1221268993 409 dbSNP
rs866224677 411 dbSNP
rs1465365363 414 dbSNP
rs941063440 414 dbSNP
rs532366724 422 dbSNP
rs1419920345 426 dbSNP
rs781600071 427 dbSNP
rs1297082630 428 dbSNP
rs1359223779 430 dbSNP
rs1050980509 431 dbSNP
rs1302625631 433 dbSNP
rs1448255089 434 dbSNP
rs571692279 435 dbSNP
rs901697372 436 dbSNP
rs529627424 439 dbSNP
rs1259136083 446 dbSNP
rs1489526387 447 dbSNP
rs1329418697 467 dbSNP
rs397951515 473 dbSNP
rs775568823 473 dbSNP
rs935124104 475 dbSNP
rs922402842 481 dbSNP
rs11481842 483 dbSNP
rs1191583862 483 dbSNP
rs527580543 483 dbSNP
rs945260181 483 dbSNP
rs976555760 483 dbSNP
rs1458998111 486 dbSNP
rs989436534 487 dbSNP
rs1439305168 488 dbSNP
rs1178562238 505 dbSNP
rs1333850517 512 dbSNP
rs1239827587 513 dbSNP
rs923872044 513 dbSNP
rs779601196 520 dbSNP
rs1424281767 524 dbSNP
rs1323673397 531 dbSNP
rs1245691784 532 dbSNP
rs1264931144 541 dbSNP
rs1468008140 555 dbSNP
rs1043623013 565 dbSNP
rs551886568 570 dbSNP
rs981241879 571 dbSNP
rs1235778126 575 dbSNP
rs970840075 576 dbSNP
rs946372902 580 dbSNP
rs1177505649 581 dbSNP
rs1416498268 588 dbSNP
rs1025116007 604 dbSNP
rs993702512 609 dbSNP
rs1482010551 614 dbSNP
rs1401580371 618 dbSNP
rs1446529915 620 dbSNP
rs1296799847 626 dbSNP
rs371783225 626 dbSNP
rs1381707231 629 dbSNP
rs916241091 650 dbSNP
rs1312157202 659 dbSNP
rs898079209 662 dbSNP
rs1207659057 664 dbSNP
rs1220500036 665 dbSNP
rs753072263 667 dbSNP
rs1318438452 672 dbSNP
rs1005203472 674 dbSNP
rs1241444153 676 dbSNP
rs960466366 683 dbSNP
rs1356504361 684 dbSNP
rs369404265 693 dbSNP
rs1230957756 695 dbSNP
rs1484058975 696 dbSNP
rs559888046 698 dbSNP
rs928824166 699 dbSNP
rs1307766069 700 dbSNP
rs1250697885 701 dbSNP
rs1182110789 706 dbSNP
rs1446102409 708 dbSNP
rs1256317774 711 dbSNP
rs888080438 719 dbSNP
rs981644980 727 dbSNP
rs1425048089 729 dbSNP
rs1049421870 731 dbSNP
rs1168824395 732 dbSNP
rs1361235743 735 dbSNP
rs1466824616 736 dbSNP
rs375379092 737 dbSNP
rs764916053 748 dbSNP
rs962147268 749 dbSNP
rs1040847873 754 dbSNP
rs1401937170 754 dbSNP
rs1015139927 762 dbSNP
rs1159051620 765 dbSNP
rs1313770795 769 dbSNP
rs1006423413 770 dbSNP
rs952087911 771 dbSNP
rs1484480611 777 dbSNP
rs1195304652 779 dbSNP
rs14975 781 dbSNP
rs936621038 786 dbSNP
rs1423876278 790 dbSNP
rs926578056 793 dbSNP
rs1427815713 802 dbSNP
rs1179684140 818 dbSNP
rs1482733327 833 dbSNP
rs996693886 834 dbSNP
rs1173341458 837 dbSNP
rs1373933464 838 dbSNP
rs1421748561 839 dbSNP
rs1298923833 840 dbSNP
rs1344709049 842 dbSNP
rs1428674863 851 dbSNP
rs980804939 855 dbSNP
rs901940754 856 dbSNP
rs1489503247 870 dbSNP
rs971214598 871 dbSNP
rs200717982 876 dbSNP
rs1286221789 878 dbSNP
rs1212949375 879 dbSNP
rs1445946440 879 dbSNP
rs1248978137 882 dbSNP
rs1240140349 884 dbSNP
rs563599367 885 dbSNP
rs1322331331 896 dbSNP
rs1193474591 899 dbSNP
rs972209372 899 dbSNP
rs1314954927 904 dbSNP
rs999362303 911 dbSNP
rs962235396 914 dbSNP
rs1407447373 918 dbSNP
rs543720875 926 dbSNP
rs1226776894 927 dbSNP
rs1325598278 933 dbSNP
rs1016452515 935 dbSNP
rs1006859154 936 dbSNP
rs1368539513 940 dbSNP
rs1241992584 943 dbSNP
rs902312781 944 dbSNP
rs1221632292 946 dbSNP
rs144234483 952 dbSNP
rs1452735011 959 dbSNP
rs1297502771 963 dbSNP
rs946613400 965 dbSNP
rs916253340 987 dbSNP
rs1028371488 988 dbSNP
rs1179590441 995 dbSNP
rs1458352755 999 dbSNP
rs1369634176 1002 dbSNP
rs1468796761 1010 dbSNP
rs1165115376 1017 dbSNP
rs1414603935 1025 dbSNP
rs191880094 1031 dbSNP
rs938985786 1034 dbSNP
rs545072226 1035 dbSNP
rs927740317 1047 dbSNP
rs1329281680 1056 dbSNP
rs972862329 1061 dbSNP
rs1009342742 1063 dbSNP
rs1423866619 1064 dbSNP
rs892277954 1065 dbSNP
rs1232082115 1066 dbSNP
rs1334953630 1066 dbSNP
rs1271844278 1070 dbSNP
rs1053630464 1071 dbSNP
rs975850142 1077 dbSNP
rs1253171919 1079 dbSNP
rs962220973 1081 dbSNP
rs1479002290 1082 dbSNP
rs572890602 1086 dbSNP
rs926597216 1091 dbSNP
rs1189909840 1096 dbSNP
rs1238224880 1101 dbSNP
rs78651555 1109 dbSNP
rs949390383 1110 dbSNP
rs1415654889 1115 dbSNP
rs917994866 1119 dbSNP
rs1219427996 1124 dbSNP
rs1321252428 1130 dbSNP
rs952286078 1131 dbSNP
rs1395477609 1132 dbSNP
rs6025696 1140 dbSNP
rs567476264 1142 dbSNP
rs557267392 1146 dbSNP
rs1355634514 1148 dbSNP
rs1019036561 1154 dbSNP
rs1277346111 1156 dbSNP
rs1290901254 1159 dbSNP
rs1387231533 1165 dbSNP
rs1342982557 1166 dbSNP
rs1029285930 1167 dbSNP
rs996897729 1171 dbSNP
rs999602925 1174 dbSNP
rs1291763079 1180 dbSNP
rs537373169 1181 dbSNP
rs371661943 1190 dbSNP
rs1019259336 1191 dbSNP
rs1400477894 1193 dbSNP
rs1010855288 1194 dbSNP
rs1185982703 1208 dbSNP
rs892224340 1210 dbSNP
rs1463744706 1212 dbSNP
rs1421870305 1217 dbSNP
rs1193836209 1221 dbSNP
rs1372366004 1227 dbSNP
rs1474311523 1232 dbSNP
rs1000747300 1233 dbSNP
rs1433684772 1239 dbSNP
rs1434162354 1241 dbSNP
rs895074774 1246 dbSNP
rs1361929041 1266 dbSNP
rs760502115 1272 dbSNP
rs1055427344 1275 dbSNP
rs111274087 1281 dbSNP
rs939039956 1284 dbSNP
rs201493564 1287 dbSNP
rs370514283 1287 dbSNP
rs138163142 1288 dbSNP
rs58695922 1288 dbSNP
rs200773967 1289 dbSNP
rs187540237 1290 dbSNP
rs6099704 1295 dbSNP
rs111381749 1303 dbSNP
rs1288366383 1306 dbSNP
rs940720744 1314 dbSNP
rs1204573011 1329 dbSNP
rs909330281 1337 dbSNP
rs985360083 1338 dbSNP
rs1251007849 1346 dbSNP
rs6025695 1347 dbSNP
rs549466723 1356 dbSNP
rs1381711389 1361 dbSNP
rs1453865875 1362 dbSNP
rs930784219 1364 dbSNP
rs922212064 1369 dbSNP
rs975364830 1370 dbSNP
rs1327051795 1373 dbSNP
rs1370744302 1374 dbSNP
rs1232499715 1375 dbSNP
rs1376915972 1376 dbSNP
rs1019205554 1382 dbSNP
rs529414648 1383 dbSNP
rs1238509390 1385 dbSNP
rs1259008952 1386 dbSNP
rs966104969 1387 dbSNP
rs1215513408 1400 dbSNP
rs987801720 1401 dbSNP
rs563560552 1402 dbSNP
rs1191449455 1403 dbSNP
rs868688541 1409 dbSNP
rs543685112 1411 dbSNP
rs1399056513 1412 dbSNP
rs978195439 1417 dbSNP
rs533479830 1420 dbSNP
rs1462513582 1422 dbSNP
rs1166325398 1423 dbSNP
rs1394304010 1429 dbSNP
rs770163101 1432 dbSNP
rs182898412 1437 dbSNP
rs1010762078 1441 dbSNP
rs147553547 1454 dbSNP
rs894939976 1457 dbSNP
rs868002656 1462 dbSNP
rs1033637926 1465 dbSNP
rs539150860 1479 dbSNP
rs776860350 1488 dbSNP
rs6025694 1490 dbSNP
rs1013467341 1494 dbSNP
rs747101507 1496 dbSNP
rs888215944 1540 dbSNP
rs1211655176 1542 dbSNP
rs896409994 1543 dbSNP
rs1454235673 1544 dbSNP
rs1238819165 1546 dbSNP
rs868528727 1546 dbSNP
rs534447779 1547 dbSNP
rs1048094868 1551 dbSNP
rs1456538763 1553 dbSNP
rs559141826 1558 dbSNP
rs1475904951 1562 dbSNP
rs542730235 1567 dbSNP
rs1417858407 1569 dbSNP
rs1460310932 1572 dbSNP
rs940710993 1575 dbSNP
rs867984472 1576 dbSNP
rs778180878 1579 dbSNP
rs1346772818 1584 dbSNP
rs887840022 1591 dbSNP
rs944935870 1592 dbSNP
rs6015050 1609 dbSNP
rs557230531 1611 dbSNP
rs1354782554 1612 dbSNP
rs748530333 1617 dbSNP
rs1231353780 1618 dbSNP
rs1354361726 1621 dbSNP
rs1311425279 1622 dbSNP
rs1203471400 1625 dbSNP
rs1249275217 1626 dbSNP
rs1486446182 1639 dbSNP
rs1211031482 1640 dbSNP
rs1256169647 1641 dbSNP
rs1443910943 1644 dbSNP
rs537336300 1645 dbSNP
rs966675991 1651 dbSNP
rs1428311131 1653 dbSNP
rs1168764921 1658 dbSNP
rs1457542933 1660 dbSNP
rs1377570210 1665 dbSNP
rs578033067 1665 dbSNP
rs55816771 1667 dbSNP
rs922085378 1668 dbSNP
rs1397427581 1671 dbSNP
rs1271861560 1674 dbSNP
rs1362501016 1680 dbSNP
rs1404735238 1681 dbSNP
rs1293138157 1686 dbSNP
rs1349663492 1689 dbSNP
rs976230122 1692 dbSNP
rs989558651 1703 dbSNP
rs1301486497 1706 dbSNP
rs145154383 1709 dbSNP
rs1381446528 1713 dbSNP
rs566082566 1720 dbSNP
rs1033914741 1730 dbSNP
rs1243261704 1731 dbSNP
rs1485822588 1732 dbSNP
rs1397249068 1737 dbSNP
rs28364846 1740 dbSNP
rs1173283168 1743 dbSNP
rs1363302007 1746 dbSNP
rs35542372 1749 dbSNP
rs1188438111 1758 dbSNP
rs139068477 1760 dbSNP
rs1402539070 1771 dbSNP
rs1444366108 1777 dbSNP
rs1319052494 1779 dbSNP
rs1253770546 1780 dbSNP
rs1003493808 1786 dbSNP
rs913526799 1792 dbSNP
rs906455831 1793 dbSNP
rs1372949448 1797 dbSNP
rs987750847 1801 dbSNP
rs1488523555 1810 dbSNP
rs535581405 1813 dbSNP
rs368416248 1814 dbSNP
rs1349254801 1816 dbSNP
rs1284296326 1821 dbSNP
rs1246477203 1823 dbSNP
rs1214307736 1825 dbSNP
rs979183276 1847 dbSNP
rs969544310 1848 dbSNP
rs888081195 1850 dbSNP
rs1414535798 1851 dbSNP
rs1048164850 1856 dbSNP
rs896399832 1859 dbSNP
rs569899612 1874 dbSNP
rs753431114 1882 dbSNP
rs1398981509 1887 dbSNP
rs11482801 1894 dbSNP
rs1396518720 1898 dbSNP
rs779741649 1906 dbSNP
rs1324964203 1907 dbSNP
rs375118508 1911 dbSNP
rs1163938867 1917 dbSNP
rs996241892 1918 dbSNP
rs1039598081 1925 dbSNP
rs944861677 1928 dbSNP
rs900618178 1931 dbSNP
rs550002411 1936 dbSNP
rs912165199 1937 dbSNP
rs1042622398 1938 dbSNP
rs944899812 1941 dbSNP
rs1336092247 1942 dbSNP
rs1213531714 1943 dbSNP
rs945395264 1948 dbSNP
rs913474656 1951 dbSNP
rs755645374 1953 dbSNP
rs989605151 1954 dbSNP
rs1182837043 1956 dbSNP
rs769960998 1962 dbSNP
rs924930823 1970 dbSNP
rs926698914 1975 dbSNP
rs1478024091 1976 dbSNP
rs568029393 1981 dbSNP
rs970496509 1982 dbSNP
rs1164018379 1989 dbSNP
rs1388341722 1991 dbSNP
rs1015473998 1993 dbSNP
rs1469440272 1997 dbSNP
rs1411412294 1999 dbSNP
rs1329132701 2000 dbSNP
rs1353504572 2001 dbSNP
rs1004076390 2005 dbSNP
rs191863692 2006 dbSNP
rs548051986 2007 dbSNP
rs952419286 2014 dbSNP
rs991973172 2015 dbSNP
rs1026589955 2036 dbSNP
rs1341914402 2046 dbSNP
rs767406017 2050 dbSNP
rs1289926972 2051 dbSNP
rs1211079291 2060 dbSNP
rs1482192358 2063 dbSNP
rs2235825 2064 dbSNP
rs368860784 2071 dbSNP
rs1474895111 2074 dbSNP
rs1187176547 2077 dbSNP
rs6025693 2091 dbSNP
rs1476279219 2092 dbSNP
rs1168269433 2098 dbSNP
rs1009480792 2103 dbSNP
rs1027647438 2106 dbSNP
rs996621213 2107 dbSNP
rs1280514856 2114 dbSNP
rs748294234 2115 dbSNP
rs1413557829 2118 dbSNP
rs890593710 2120 dbSNP
rs1332783119 2123 dbSNP
rs1040466557 2129 dbSNP
rs1042702499 2130 dbSNP
rs1269944292 2132 dbSNP
rs1340360133 2133 dbSNP
rs1236804708 2144 dbSNP
rs1008950813 2147 dbSNP
rs1326324237 2149 dbSNP
rs528039208 2150 dbSNP
rs1407143788 2151 dbSNP
rs763918921 2152 dbSNP
rs1193683722 2156 dbSNP
rs1372310620 2157 dbSNP
rs936230851 2159 dbSNP
rs926230071 2167 dbSNP
rs1433620200 2178 dbSNP
rs1170289701 2179 dbSNP
rs559329514 2180 dbSNP
rs1392461201 2181 dbSNP
rs915276207 2184 dbSNP
rs1383243427 2186 dbSNP
rs1318197767 2187 dbSNP
rs1054213005 2188 dbSNP
rs938003529 2189 dbSNP
rs759855524 2191 dbSNP
rs982185071 2192 dbSNP
rs970570166 2195 dbSNP
rs908380052 2196 dbSNP
rs982686985 2201 dbSNP
rs952617150 2203 dbSNP
rs1026871228 2204 dbSNP
rs777054555 2205 dbSNP
rs1200993591 2207 dbSNP
rs951994542 2208 dbSNP
rs189059679 2210 dbSNP
rs1019789884 2212 dbSNP
rs1195250976 2216 dbSNP
rs1007979715 2219 dbSNP
rs1319595248 2229 dbSNP
rs1432200929 2235 dbSNP
rs1196186975 2237 dbSNP
rs1255803414 2240 dbSNP
rs964655901 2253 dbSNP
rs890652356 2259 dbSNP
rs1008899924 2276 dbSNP
rs1018921353 2276 dbSNP
rs1339201494 2280 dbSNP
rs1387018572 2286 dbSNP
rs1275959056 2288 dbSNP
rs373692723 2294 dbSNP
rs1009709856 2295 dbSNP
rs557406038 2296 dbSNP
rs543595321 2297 dbSNP
rs938020216 2298 dbSNP
rs1447749122 2299 dbSNP
rs1238344815 2306 dbSNP
rs1402692992 2327 dbSNP
rs1000810186 2328 dbSNP
rs772483041 2332 dbSNP
rs1215373362 2337 dbSNP
rs1409148509 2343 dbSNP
rs1425610430 2346 dbSNP
rs1046956001 2354 dbSNP
rs1488005498 2363 dbSNP
rs1045071007 2366 dbSNP
rs1410486679 2370 dbSNP
rs894789071 2370 dbSNP
rs949010194 2370 dbSNP
rs6025692 2376 dbSNP
rs1251789879 2377 dbSNP
rs1166164198 2382 dbSNP
rs1178680917 2385 dbSNP
rs377379857 2386 dbSNP
rs182740417 2392 dbSNP
rs537501306 2393 dbSNP
rs200515609 2399 dbSNP
rs1235468295 2409 dbSNP
rs1235962762 2422 dbSNP
rs1390960229 2423 dbSNP
rs907665451 2428 dbSNP
rs1348607600 2431 dbSNP
rs1235079847 2441 dbSNP
rs931124998 2442 dbSNP
rs1320899266 2443 dbSNP
rs557415815 2450 dbSNP
rs1307214408 2454 dbSNP
rs1203865315 2457 dbSNP
rs1248961273 2462 dbSNP
rs919840074 2466 dbSNP
rs975043862 2469 dbSNP
rs1413632777 2471 dbSNP
rs572326262 2472 dbSNP
rs150774413 2474 dbSNP
rs190455665 2479 dbSNP
rs533262090 2480 dbSNP
rs564566400 2487 dbSNP
rs1000354466 2495 dbSNP
rs904660011 2499 dbSNP
rs1379288431 2500 dbSNP
rs1378333320 2501 dbSNP
rs3764686 2507 dbSNP
rs967132681 2508 dbSNP
rs1441764773 2509 dbSNP
rs1227242681 2516 dbSNP
rs1020022268 2520 dbSNP
rs749646832 2525 dbSNP
rs34378889 2530 dbSNP
rs1237476839 2532 dbSNP
rs939022466 2535 dbSNP
rs539601311 2540 dbSNP
rs886177563 2541 dbSNP
rs73915237 2542 dbSNP
rs1002458625 2552 dbSNP
rs1166949415 2555 dbSNP
rs920386475 2566 dbSNP
rs3764687 2567 dbSNP
rs1405172605 2571 dbSNP
rs974613783 2572 dbSNP
rs1358550084 2575 dbSNP
rs1046378276 2578 dbSNP
rs949357238 2579 dbSNP
rs887208571 2584 dbSNP
rs1047096131 2595 dbSNP
rs749926570 2596 dbSNP
rs1295021080 2605 dbSNP
rs1349591561 2607 dbSNP
rs1238374689 2608 dbSNP
rs1212653231 2610 dbSNP
rs1484925207 2612 dbSNP
rs1280232532 2614 dbSNP
rs1217991851 2619 dbSNP
rs931155905 2640 dbSNP
rs528024892 2653 dbSNP
rs148697745 2656 dbSNP
rs1031684369 2657 dbSNP
rs1187054604 2660 dbSNP
rs1255206915 2664 dbSNP
rs186048416 2669 dbSNP
rs181108210 2675 dbSNP
rs1380121206 2689 dbSNP
rs912440874 2696 dbSNP
rs986483173 2697 dbSNP
rs966998394 2701 dbSNP
rs1023520237 2707 dbSNP
rs1456570150 2719 dbSNP
rs1318260691 2721 dbSNP
rs1013131033 2722 dbSNP
rs1412685521 2725 dbSNP
rs1315881235 2730 dbSNP
rs1374694527 2732 dbSNP
rs757267959 2733 dbSNP
rs1224906798 2736 dbSNP
rs191486020 2737 dbSNP
rs1329074485 2746 dbSNP
rs146025899 2748 dbSNP
rs958489313 2750 dbSNP
rs762911863 2751 dbSNP
rs1004482432 2752 dbSNP
rs1471208049 2760 dbSNP
rs1002896508 2764 dbSNP
rs778461476 2775 dbSNP
rs1412669184 2781 dbSNP
rs1043075 2784 dbSNP
rs1047396536 2786 dbSNP
rs532956602 2799 dbSNP
rs994963689 2802 dbSNP
rs898951623 2803 dbSNP
rs1415487780 2816 dbSNP
rs969677854 2819 dbSNP
rs1025155026 2820 dbSNP
rs1013543173 2828 dbSNP
rs376814859 2829 dbSNP
rs1051600870 2835 dbSNP
rs1257273105 2836 dbSNP
rs752515330 2838 dbSNP
rs924566390 2850 dbSNP
rs1047167884 2869 dbSNP
rs1228050858 2870 dbSNP
rs1487152697 2878 dbSNP
rs978792430 2886 dbSNP
rs969199345 2893 dbSNP
rs1482089819 2900 dbSNP
rs916021156 2902 dbSNP
rs1419866623 2904 dbSNP
rs991644108 2908 dbSNP
rs1473035607 2910 dbSNP
rs564332598 2918 dbSNP
rs766528214 2919 dbSNP
rs1411279046 2921 dbSNP
rs1292285946 2923 dbSNP
rs898352871 2933 dbSNP
rs1004430406 2934 dbSNP
rs556004226 2938 dbSNP
rs951672174 2941 dbSNP
rs1026394787 2943 dbSNP
rs1381995747 2944 dbSNP
rs1341581613 2947 dbSNP
rs1244564590 2948 dbSNP
rs1039553235 2955 dbSNP
rs1341850236 2959 dbSNP
rs1401724803 2962 dbSNP
rs760908809 2963 dbSNP
rs1340151807 2966 dbSNP
rs1288270260 2967 dbSNP
rs912483910 2968 dbSNP
rs1213089701 2971 dbSNP
rs540952015 2977 dbSNP
rs12929 2983 dbSNP
rs1038786427 2984 dbSNP
rs1351186280 2991 dbSNP
rs1476248606 3006 dbSNP
rs1168843393 3009 dbSNP
rs945731785 3017 dbSNP
rs1162271342 3018 dbSNP
rs1007275402 3027 dbSNP
rs1460614045 3035 dbSNP
rs1403600460 3036 dbSNP
rs185843670 3037 dbSNP
rs1332726086 3045 dbSNP
rs989924649 3046 dbSNP
rs1436194465 3049 dbSNP
rs890262828 3055 dbSNP
rs1194797597 3059 dbSNP
rs957130617 3072 dbSNP
rs541771599 3073 dbSNP
rs1186511111 3076 dbSNP
rs116850191 3077 dbSNP
rs1276338382 3079 dbSNP
rs1466098003 3097 dbSNP
rs77872238 3105 dbSNP
rs1212006848 3117 dbSNP
rs1447259134 3118 dbSNP
rs1334480046 3122 dbSNP
rs1258992779 3125 dbSNP
rs1195058110 3126 dbSNP
rs1377729692 3129 dbSNP
rs1025189081 3134 dbSNP
rs1013783674 3141 dbSNP
rs951422648 3147 dbSNP
rs947438915 3152 dbSNP
rs1294769077 3155 dbSNP
rs570406172 3157 dbSNP
rs960116395 3158 dbSNP
rs995886620 3163 dbSNP
rs1323342586 3167 dbSNP
rs1231088009 3169 dbSNP
rs1273066712 3172 dbSNP
rs550482534 3174 dbSNP
rs928756033 3178 dbSNP
rs1209173936 3181 dbSNP
rs554387083 3183 dbSNP
rs1463345311 3184 dbSNP
rs982985160 3185 dbSNP
rs951717043 3189 dbSNP
rs1040153721 3190 dbSNP
rs1006734459 3191 dbSNP
rs1414885209 3195 dbSNP
rs973463502 3196 dbSNP
rs1159016751 3198 dbSNP
rs1386952745 3200 dbSNP
rs769120265 3201 dbSNP
rs890957875 3205 dbSNP
rs1172446037 3213 dbSNP
rs866228786 3216 dbSNP
rs1463848832 3217 dbSNP
rs963046175 3226 dbSNP
rs1017241472 3234 dbSNP
rs749702154 3235 dbSNP
rs534223618 3236 dbSNP
rs945929915 3238 dbSNP
rs1287570876 3241 dbSNP
rs142629618 3251 dbSNP
rs1246694726 3252 dbSNP
rs1054138841 3258 dbSNP
rs775875022 3261 dbSNP
rs1170290167 3262 dbSNP
rs1434277467 3264 dbSNP
rs1030113171 3265 dbSNP
rs935640528 3269 dbSNP
rs112660826 3271 dbSNP
rs1165925985 3276 dbSNP
rs745459228 3279 dbSNP
rs1368158270 3283 dbSNP
rs6025691 3284 dbSNP
rs201737117 3286 dbSNP
rs373785341 3286 dbSNP
rs180919658 3290 dbSNP
rs1409223672 3296 dbSNP
rs1307400684 3300 dbSNP
rs1042950872 3304 dbSNP
rs1397602643 3305 dbSNP
rs756888100 3306 dbSNP
rs1250568413 3312 dbSNP
rs918081953 3325 dbSNP
rs746517839 3329 dbSNP
rs1242203156 3342 dbSNP
rs992392073 3345 dbSNP
rs951645434 3348 dbSNP
rs777901053 3351 dbSNP
rs549881934 3352 dbSNP
rs755985709 3358 dbSNP
rs1182858435 3364 dbSNP
rs963000254 3366 dbSNP
rs1018396295 3370 dbSNP
rs1422362380 3375 dbSNP
rs1170729699 3378 dbSNP
rs73915235 3382 dbSNP
rs564116332 3386 dbSNP
rs890989855 3387 dbSNP
rs1394723517 3395 dbSNP
rs1166758905 3396 dbSNP
rs41275652 3397 dbSNP
rs1467546027 3400 dbSNP
rs983339176 3406 dbSNP
rs369078601 3407 dbSNP
rs920098898 3408 dbSNP
rs10629 3418 dbSNP
rs1054738348 3419 dbSNP
rs112265589 3420 dbSNP
rs1271834945 3427 dbSNP
rs985794095 3434 dbSNP
rs954459223 3443 dbSNP
rs575998190 3446 dbSNP
rs999023191 3461 dbSNP
rs902991871 3462 dbSNP
rs1248919560 3467 dbSNP
rs1021878814 3473 dbSNP
rs750713445 3474 dbSNP
rs1186854855 3476 dbSNP
rs949784454 3477 dbSNP
rs556174917 3486 dbSNP
rs41275650 3487 dbSNP
rs1055798910 3488 dbSNP
rs12578 3489 dbSNP
rs930106651 3490 dbSNP
rs1486561297 3497 dbSNP
rs918847983 3499 dbSNP
rs553980640 3501 dbSNP
rs1043118 3502 dbSNP
rs112975251 3503 dbSNP
rs1018675736 3504 dbSNP
rs1280805230 3505 dbSNP
rs942947669 3509 dbSNP
rs1236384053 3512 dbSNP
rs555275312 3513 dbSNP
rs1248615792 3518 dbSNP
rs911514561 3519 dbSNP
rs1334773350 3522 dbSNP
rs6070203 3523 dbSNP
rs867718902 3524 dbSNP
rs751962234 3534 dbSNP
rs1377722333 3541 dbSNP
rs6025690 3558 dbSNP
rs763411753 3564 dbSNP
rs1412438183 3569 dbSNP
rs538567567 3576 dbSNP
rs1311526203 3578 dbSNP
rs1315851721 3579 dbSNP
rs1351250026 3582 dbSNP
rs6070202 3584 dbSNP
rs1436622514 3589 dbSNP
rs1434660655 3590 dbSNP
rs145612315 3604 dbSNP
rs1292412473 3619 dbSNP
rs922947449 3626 dbSNP
rs1029726861 3627 dbSNP
rs1289454683 3629 dbSNP
rs977158547 3630 dbSNP
rs549841245 3633 dbSNP
rs1226930687 3645 dbSNP
rs34804663 3654 dbSNP
rs6025689 3658 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 56937.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000341744.3 | 3UTR | AUAAUUUCACUUAACUUUAAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
82 hsa-miR-6830-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT081461 SSBP4 single stranded DNA binding protein 4 2 2
MIRT132029 IER5 immediate early response 5 2 2
MIRT187279 DAZAP2 DAZ associated protein 2 2 6
MIRT350303 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 8
MIRT350307 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 8
MIRT372105 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT408159 DCK deoxycytidine kinase 2 4
MIRT442623 LOX lysyl oxidase 2 2
MIRT442952 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT469401 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT476631 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT485039 TMEM189 transmembrane protein 189 2 8
MIRT485133 RASSF8 Ras association domain family member 8 2 6
MIRT498963 ORC4 origin recognition complex subunit 4 2 8
MIRT500082 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 8
MIRT503018 CAND1 cullin associated and neddylation dissociated 1 2 2
MIRT503374 SCAMP1 secretory carrier membrane protein 1 2 2
MIRT504975 ZNF711 zinc finger protein 711 2 2
MIRT518984 NNT nicotinamide nucleotide transhydrogenase 2 4
MIRT520754 TFDP1 transcription factor Dp-1 2 6
MIRT526785 SGCD sarcoglycan delta 2 2
MIRT533868 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT535107 PMEPA1 prostate transmembrane protein, androgen induced 1 2 2
MIRT538991 BAG4 BCL2 associated athanogene 4 2 2
MIRT543518 PRSS21 protease, serine 21 2 2
MIRT543813 SNX10 sorting nexin 10 2 2
MIRT543825 GSG1 germ cell associated 1 2 2
MIRT545334 CCDC83 coiled-coil domain containing 83 2 2
MIRT545669 DECR1 2,4-dienoyl-CoA reductase 1 2 2
MIRT547798 KAT7 lysine acetyltransferase 7 2 2
MIRT548068 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT549577 ZNF850 zinc finger protein 850 2 2
MIRT550753 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT550808 FAM229B family with sequence similarity 229 member B 2 2
MIRT551457 CARKD NAD(P)HX dehydratase 2 2
MIRT551852 RPS3 ribosomal protein S3 2 2
MIRT554218 SLC30A1 solute carrier family 30 member 1 2 2
MIRT556588 LEPROT leptin receptor overlapping transcript 2 2
MIRT557344 HDGF heparin binding growth factor 2 4
MIRT571945 LARP1 La ribonucleoprotein domain family member 1 2 2
MIRT574374 YY1 YY1 transcription factor 2 2
MIRT611142 CRISP1 cysteine rich secretory protein 1 2 4
MIRT611799 FCRL4 Fc receptor like 4 2 2
MIRT612834 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT617257 GLIPR1L2 GLI pathogenesis related 1 like 2 2 2
MIRT619781 NRIP2 nuclear receptor interacting protein 2 2 2
MIRT620440 SEMA3E semaphorin 3E 2 2
MIRT621725 TNR tenascin R 2 2
MIRT622905 PCDH17 protocadherin 17 2 2
MIRT623428 KLF6 Kruppel like factor 6 2 2
MIRT627856 PITPNM3 PITPNM family member 3 2 2
MIRT633894 FGF10 fibroblast growth factor 10 2 2
MIRT636257 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT640654 FRY FRY microtubule binding protein 2 2
MIRT640857 TSHZ2 teashirt zinc finger homeobox 2 2 4
MIRT641220 LRCH1 leucine rich repeats and calponin homology domain containing 1 2 2
MIRT642526 ANKRD9 ankyrin repeat domain 9 2 2
MIRT646011 TNFAIP8L2 TNF alpha induced protein 8 like 2 2 2
MIRT653317 SMOC1 SPARC related modular calcium binding 1 2 2
MIRT657940 GATM glycine amidinotransferase 2 2
MIRT658291 FAM83F family with sequence similarity 83 member F 2 2
MIRT660607 ANTXR2 anthrax toxin receptor 2 2 2
MIRT664675 LMBR1L limb development membrane protein 1 like 2 2
MIRT664889 PRRG4 proline rich and Gla domain 4 2 2
MIRT666972 PHF20L1 PHD finger protein 20 like 1 2 2
MIRT669128 CD200 CD200 molecule 2 2
MIRT673267 RUNDC1 RUN domain containing 1 2 2
MIRT704609 CLN8 CLN8, transmembrane ER and ERGIC protein 2 2
MIRT709404 TADA2A transcriptional adaptor 2A 2 2
MIRT710963 CMKLR1 chemerin chemokine-like receptor 1 2 2
MIRT711745 DTX1 deltex E3 ubiquitin ligase 1 2 2
MIRT715009 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT715467 NEGR1 neuronal growth regulator 1 2 2
MIRT715737 CD226 CD226 molecule 2 2
MIRT716526 KSR2 kinase suppressor of ras 2 2 2
MIRT718311 TMPRSS11B transmembrane protease, serine 11B 2 2
MIRT719006 TMEM184C transmembrane protein 184C 2 2
MIRT719319 STAC SH3 and cysteine rich domain 2 2
MIRT722092 SUSD1 sushi domain containing 1 2 2
MIRT723198 TNRC6C trinucleotide repeat containing 6C 2 2
MIRT723239 BTLA B and T lymphocyte associated 2 2
MIRT724850 IGFBP5 insulin like growth factor binding protein 5 2 2

Error report submission