Gene Symbol |
GRIN2B
|
Synonyms |
EIEE27, GluN2B, MRD6, NMDAR2B, NR2B, hNR3 |
Description |
glutamate ionotropic receptor NMDA type subunit 2B |
Transcript |
NM_000834
|
Expression |
|
Putative miRNA Targets on GRIN2B |
|
3'UTR of GRIN2B (miRNA target sites are highlighted) |
>GRIN2B|NM_000834|3'UTR
1 GTGAGGGAACAGAGAGGTTAAGGTGGGTACGGGAGGGTAAGGCTGTGGGTCGCGTGATGCGCATGTCACGGAGGGTGACG
81 GGGGTGAACTTGGTTCCCATTTGCTCCTTTCTTGTTTTAATTTATTTATGGGATCCTGGAGTTCTGGTTCCTACTGGGGG
161 CAACCCTGGTGACCAGCACCATCTCTCCTCCTTTTCACAGTTCTCTCCTTCTTCCCCCCGCTGTCAGCCATTCCTGTTCC
241 CATGAGATGATGCCATGGGCCCTCTCAGCAGGGGAGGGTAGAGCGGAGAAAGGAAGGGCTGCATGCGGGCTTCCTCCTGG
321 TGTGGAAGAGCTCCTTGATATCCTCTTTGAGTGAAGCTGGGAGAACCAAAAAGAGGCTATGTGAGCACAAAGGTAGCTTT
401 TCCCAAACTGATCTTTTCATTTAGGTGAGGAAGCAAAAGCATCTATGTGAGACCATTTAGCACACTGCTTGTGAAAGGAA
481 AGAGGCTCTGGCTAAATTCATGCTGCTTAGATGACATCTGTCTAGGAATCATGTGCCAAGCAGAGGTTGGGAGGCCATTT
561 GTGTTTATATATAAGCCAAAAAATGCTTGCTTCAACCCCATGAGACTCGATAGTGGTGGTGAACAGAACAAAAGGTCATT
641 GGTGGCAGAGTGGATTCTTGAACAAACTGGAAAGTACGTTATGATAGTGTCCCACGGTGCCTTGGGGACAAGAGCAGGTG
721 GATTGTGCGTGCATGTGTGTTCATGCACACTTGCACCCATGTGTAGTCAGGTGCCTCAAGAGAAGGCAACCTTGACTCTT
801 TCTATTGTTTCTTTCAATATCCCCAAGCAGTGTGATTGTTTGGCTTATATACAGACAGAGATGGCCATGTATTACCTGAA
881 TTTTGGCTGTGTCTCCCTTCATCCTTCTGGAATAAGGAGAATGAAAATTCTTGATAAAGAAGATTCTGTGGTCTAAACAA
961 AAAAAGGCGGTGAGCAATCCTGCAAGAACAAGGTACATAAACAAGTCCTCAGTGGTTGGCAATTGTTTCAACCAGTTTGA
1041 ACCAAGAACTTTCCAGGAAGGCTAAAGGGAAACCGAATTTTCACAGCCATGATTCTTTTGCCCACACTTGGGAGCAAAAG
1121 ATTCTACAAAGCTCTTTTGAGCATTTAGACTCTCGACTGGCCAAGGTTTGGGGAAGAACGAAGCCACCTTTGAAGAAGTA
1201 AGGAGTCGTGTATGGTAGGGTAAGTGAGAGAGGGGGATGTTTCCAATGCTTTGATCCCTTCTTACTTAACCTGAAGCTAG
1281 ACGAGCAGGCTTCTTCCCCCCAAAACT
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' gaCGUCCC-UUCACCCUCUCUCu 5'
|:|||| |||| |||||||
Target 5' tgGTAGGGTAAGT--GAGAGAGg 3'
|
1213 - 1233
|
168.00 |
-25.60 |
2
|
miRNA 3' gaCGUCCCUUCAC------CCUCUCUCu 5'
||||||:|| | ||||| ||
Target 5' caGCAGGGGAGGGTAGAGCGGAGAAAGg 3'
|
266 - 293
|
138.00 |
-26.00 |
3
|
miRNA 3' gacgUCCCUUCACCCUCUCUCu 5'
|||||| ||||||
Target 5' -gtgAGGGAAC----AGAGAGg 3'
|
1 - 17
|
127.00 |
-15.80 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|