miRTarBase - #MIRT541800


—
pre-miRNA Information
pre-miRNA hsa-mir-4793   
Genomic Coordinates chr3: 48644194 - 48644280
Description Homo sapiens miR-4793 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4793-3p
Sequence 58| UCUGCACUGUGAGUUGGCUGGCU |80
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5899925 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs779602935 6 dbSNP
rs757908486 7 dbSNP
rs1422853760 15 dbSNP
rs377721296 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol DUSP28   
Synonyms DUSP26, VHP
Description dual specificity phosphatase 28
Transcript NM_001033575   
Expression
Putative miRNA Targets on DUSP28
3'UTR of DUSP28
(miRNA target sites are highlighted)		 
>DUSP28|NM_001033575|3'UTR
   1 AGCTTGAAGGCCTGCTGCCTGGAGGAAGGATGTCCCTGCACTGATACAGAAGCTGTTTCTGGCAAAGCCTGCCGTGTCTT
  81 ACATTTGTCTCTCTATCCGGATTAGATGTTGCTATATGAACACATCGGGACTGTGTCTGCAGGAAGGAGCTCCCCATTCG
 161 AGGCCTTCACAGTGTCACCCACATTCACCTCTTTCCACTTAAACGTGTCCCATGAATCTTGTCATAACAGTTTTGTGTTC
 241 CTTAACTATTTTGTCTGCCATGTCATTTATGATGTATATAACCTCTTTAATGCCTGAAATCATAAGAATAATCATCAAAG
 321 GCAAGAGGGTTGTATATTTTCCCGTTGGAGACACATCTGGAATTTGCTGCAATAAAATAATAATAAGAAAGCA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ucGGUCGGUU----GAGUGUCAC-GUcu 5'
            ||| :|:|    :|||||||| ||  
Target 5' ccCCATTCGAGGCCTTCACAGTGTCAcc 3'
 152 - 179 119.00 -16.94
2 
miRNA  3' ucggucgguugagugucACGUCu 5'
                           ||||| 
Target 5' cacatcgggactgtgtcTGCAGg 3'
 121 - 143 100.00 -10.20
3 
miRNA  3' ucGGU-CGGUUGAGUGUCACGUcu 5'
            ||| |:| |:|:|:: ||:|  
Target 5' tgCCATGTC-ATTTATGATGTAta 3'
 256 - 278 84.00 -12.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN32077263 23 COSMIC
COSN30518361 36 COSMIC
COSN20118171 53 COSMIC
COSN30753871 100 COSMIC
COSN30591801 113 COSMIC
COSN31590760 204 COSMIC
COSN25476250 281 COSMIC
COSN22157287 365 COSMIC
COSN14887076 602 COSMIC
COSN20695525 914 COSMIC
COSN14866222 984 COSMIC
COSN22871087 998 COSMIC
COSN25347596 2040 COSMIC
COSN7242222 2087 COSMIC
COSN20090757 2282 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1370689411 4 dbSNP
rs911979249 7 dbSNP
rs1365784483 8 dbSNP
rs150435311 10 dbSNP
rs765214526 12 dbSNP
rs1128149 13 dbSNP
rs758133861 15 dbSNP
rs377584754 20 dbSNP
rs751173364 21 dbSNP
rs75053863 25 dbSNP
rs777013739 33 dbSNP
rs1184317303 34 dbSNP
rs780761843 34 dbSNP
rs954740153 35 dbSNP
rs745355662 38 dbSNP
rs1044805553 41 dbSNP
rs374709130 42 dbSNP
rs1207478073 43 dbSNP
rs779415890 45 dbSNP
rs1442254807 47 dbSNP
rs748666348 48 dbSNP
rs1387422346 49 dbSNP
rs1321907170 51 dbSNP
rs772520331 53 dbSNP
rs1290733290 57 dbSNP
rs1168990587 59 dbSNP
rs1350414828 60 dbSNP
rs987887503 65 dbSNP
rs1004099428 66 dbSNP
rs1433584733 66 dbSNP
rs1303103835 67 dbSNP
rs1390045181 71 dbSNP
rs1429841156 73 dbSNP
rs1469078340 75 dbSNP
rs77298443 84 dbSNP
rs956900291 87 dbSNP
rs1373086817 88 dbSNP
rs1446904646 89 dbSNP
rs1303048605 95 dbSNP
rs1363175048 96 dbSNP
rs373338224 98 dbSNP
rs748306909 98 dbSNP
rs770006030 98 dbSNP
rs898056832 98 dbSNP
rs989440146 98 dbSNP
rs1381129908 107 dbSNP
rs774235235 108 dbSNP
rs777099336 110 dbSNP
rs1229409731 113 dbSNP
rs1296816162 124 dbSNP
rs1365768056 132 dbSNP
rs1229240920 143 dbSNP
rs1350527081 144 dbSNP
rs1027607432 149 dbSNP
rs115631581 150 dbSNP
rs1209730914 156 dbSNP
rs576795363 159 dbSNP
rs541725219 161 dbSNP
rs1322236738 163 dbSNP
rs1044837468 167 dbSNP
rs1384116056 169 dbSNP
rs1457595109 169 dbSNP
rs1156787395 171 dbSNP
rs1473805649 174 dbSNP
rs924009811 179 dbSNP
rs939087168 183 dbSNP
rs1047188208 187 dbSNP
rs886802488 188 dbSNP
rs1247951504 192 dbSNP
rs772084662 194 dbSNP
rs1446826129 200 dbSNP
rs775421706 204 dbSNP
rs1282739933 205 dbSNP
rs899414778 209 dbSNP
rs1212207702 210 dbSNP
rs773667100 210 dbSNP
rs996350400 215 dbSNP
rs976978779 225 dbSNP
rs1029134498 229 dbSNP
rs1244624126 233 dbSNP
rs1380063449 233 dbSNP
rs923832329 247 dbSNP
rs956833411 248 dbSNP
rs954974942 267 dbSNP
rs1009004475 271 dbSNP
rs1422511566 273 dbSNP
rs1428702731 274 dbSNP
rs1031489012 279 dbSNP
rs1407080689 280 dbSNP
rs533123950 288 dbSNP
rs1422854125 289 dbSNP
rs1392222107 290 dbSNP
rs989882861 298 dbSNP
rs1022170284 299 dbSNP
rs560123877 301 dbSNP
rs1451377311 305 dbSNP
rs969242565 309 dbSNP
rs1319569307 313 dbSNP
rs1201466437 325 dbSNP
rs980585437 326 dbSNP
rs1044773608 329 dbSNP
rs927778416 331 dbSNP
rs939163882 336 dbSNP
rs575083001 343 dbSNP
rs1291723253 346 dbSNP
rs1221041377 347 dbSNP
rs182963710 362 dbSNP
rs1389096133 365 dbSNP
rs982582137 366 dbSNP
rs908282608 368 dbSNP
rs1438365604 376 dbSNP
rs941076840 376 dbSNP
rs1301119333 377 dbSNP
rs1365622942 388 dbSNP
rs1218670324 395 dbSNP
rs1403156696 396 dbSNP
rs77560876 402 dbSNP
rs764197989 404 dbSNP
rs1314092466 409 dbSNP
rs563914761 419 dbSNP
rs1409532140 427 dbSNP
rs899426069 428 dbSNP
rs1036927539 432 dbSNP
rs898031198 435 dbSNP
rs1268765512 448 dbSNP
rs138200899 455 dbSNP
rs188124874 464 dbSNP
rs890656777 476 dbSNP
rs1007491735 478 dbSNP
rs1270482485 479 dbSNP
rs1220706840 484 dbSNP
rs546887735 486 dbSNP
rs1324064056 487 dbSNP
rs1018924536 494 dbSNP
rs762224961 495 dbSNP
rs1031123746 506 dbSNP
rs1352255960 511 dbSNP
rs569770420 520 dbSNP
rs117767012 521 dbSNP
rs1245449545 532 dbSNP
rs1336448201 534 dbSNP
rs1429102486 545 dbSNP
rs149306808 546 dbSNP
rs998989295 551 dbSNP
rs1022224292 554 dbSNP
rs969294947 555 dbSNP
rs1230793910 565 dbSNP
rs980680104 575 dbSNP
rs1211872067 576 dbSNP
rs750902250 583 dbSNP
rs915140277 584 dbSNP
rs969319935 587 dbSNP
rs1331066432 589 dbSNP
rs866081905 593 dbSNP
rs547952555 594 dbSNP
rs939093434 595 dbSNP
rs565686776 607 dbSNP
rs1036071216 609 dbSNP
rs756869698 609 dbSNP
rs563316470 613 dbSNP
rs930797946 613 dbSNP
rs1159077884 614 dbSNP
rs1417986330 615 dbSNP
rs78467735 615 dbSNP
rs889347576 616 dbSNP
rs1444801377 617 dbSNP
rs1007800414 619 dbSNP
rs1215058081 619 dbSNP
rs1292036448 619 dbSNP
rs536146450 619 dbSNP
rs901805002 619 dbSNP
rs999270202 621 dbSNP
rs1031728736 625 dbSNP
rs530388883 625 dbSNP
rs908291514 625 dbSNP
rs1363162822 626 dbSNP
rs548042869 629 dbSNP
rs1452176755 632 dbSNP
rs1458580434 633 dbSNP
rs1323833024 637 dbSNP
rs893230259 640 dbSNP
rs1022168373 645 dbSNP
rs1161338262 645 dbSNP
rs1384191035 645 dbSNP
rs201681605 645 dbSNP
rs1349171105 649 dbSNP
rs969283860 652 dbSNP
rs1229393103 655 dbSNP
rs941076129 663 dbSNP
rs973749650 665 dbSNP
rs920951684 666 dbSNP
rs980720797 667 dbSNP
rs569849512 674 dbSNP
rs1050697815 679 dbSNP
rs536721451 680 dbSNP
rs1035350280 681 dbSNP
rs1330286563 687 dbSNP
rs1308304711 688 dbSNP
rs1295226764 692 dbSNP
rs960367105 696 dbSNP
rs146241199 699 dbSNP
rs1304319377 700 dbSNP
rs752119311 701 dbSNP
rs1288369158 704 dbSNP
rs1451472623 705 dbSNP
rs138169951 706 dbSNP
rs534646324 710 dbSNP
rs1248009048 712 dbSNP
rs1481774382 713 dbSNP
rs892564690 721 dbSNP
rs1010921380 726 dbSNP
rs930412742 728 dbSNP
rs1200129073 730 dbSNP
rs1181050281 738 dbSNP
rs984910575 749 dbSNP
rs910759757 752 dbSNP
rs1022319108 768 dbSNP
rs1250997564 775 dbSNP
rs1314360727 777 dbSNP
rs905232262 778 dbSNP
rs553007634 779 dbSNP
rs1344182846 780 dbSNP
rs575145619 786 dbSNP
rs369644239 795 dbSNP
rs542554327 801 dbSNP
rs1396723421 808 dbSNP
rs371532647 808 dbSNP
rs538991693 808 dbSNP
rs1412791755 814 dbSNP
rs563702214 819 dbSNP
rs1297295050 833 dbSNP
rs1460263171 840 dbSNP
rs1002153189 841 dbSNP
rs4676425 842 dbSNP
rs1480035833 850 dbSNP
rs934656838 855 dbSNP
rs960870360 856 dbSNP
rs1250053043 858 dbSNP
rs1194355708 859 dbSNP
rs192902672 860 dbSNP
rs1367568531 864 dbSNP
rs1004059444 866 dbSNP
rs1307687434 871 dbSNP
rs1195343678 875 dbSNP
rs1245954064 878 dbSNP
rs1015816627 880 dbSNP
rs962473672 886 dbSNP
rs1321972091 896 dbSNP
rs1290787978 899 dbSNP
rs564642044 900 dbSNP
rs1412072903 901 dbSNP
rs1011704185 909 dbSNP
rs1389254273 910 dbSNP
rs1407861609 936 dbSNP
rs567898890 950 dbSNP
rs1229445183 951 dbSNP
rs1160275192 956 dbSNP
rs1454364798 958 dbSNP
rs1363367869 963 dbSNP
rs756983290 964 dbSNP
rs1138848 968 dbSNP
rs1244000053 970 dbSNP
rs986424201 970 dbSNP
rs1460293040 974 dbSNP
rs1286933327 976 dbSNP
rs1206305503 979 dbSNP
rs1350592894 981 dbSNP
rs1138847 983 dbSNP
rs1237347643 986 dbSNP
rs921866574 992 dbSNP
rs1315357820 1000 dbSNP
rs1451615113 1007 dbSNP
rs1380380819 1013 dbSNP
rs146018793 1014 dbSNP
rs773368783 1016 dbSNP
rs184353683 1017 dbSNP
rs566744507 1019 dbSNP
rs1384180627 1020 dbSNP
rs775543932 1024 dbSNP
rs1426663121 1033 dbSNP
rs1483869769 1033 dbSNP
rs1184940318 1035 dbSNP
rs575611653 1043 dbSNP
rs1443151565 1051 dbSNP
rs946856858 1053 dbSNP
rs1043797014 1060 dbSNP
rs951796199 1067 dbSNP
rs189283914 1068 dbSNP
rs1213786218 1069 dbSNP
rs910311076 1070 dbSNP
rs1002198812 1078 dbSNP
rs976241680 1086 dbSNP
rs778846222 1088 dbSNP
rs923531298 1089 dbSNP
rs1325748496 1092 dbSNP
rs1371241219 1096 dbSNP
rs1056858362 1102 dbSNP
rs548487016 1105 dbSNP
rs1004516055 1107 dbSNP
rs1332409599 1108 dbSNP
rs569729917 1111 dbSNP
rs1422909437 1117 dbSNP
rs1053120092 1121 dbSNP
rs148616938 1127 dbSNP
rs747007940 1128 dbSNP
rs1371823360 1129 dbSNP
rs947369704 1135 dbSNP
rs1044462727 1141 dbSNP
rs905958085 1142 dbSNP
rs1002013370 1144 dbSNP
rs1449468061 1146 dbSNP
rs995301976 1148 dbSNP
rs1028116963 1149 dbSNP
rs953769296 1151 dbSNP
rs896390848 1156 dbSNP
rs993856065 1159 dbSNP
rs1225350726 1170 dbSNP
rs986512275 1175 dbSNP
rs1026234189 1176 dbSNP
rs1403119606 1177 dbSNP
rs1282666292 1183 dbSNP
rs1434437576 1186 dbSNP
rs551977011 1196 dbSNP
rs751206005 1199 dbSNP
rs1356461702 1208 dbSNP
rs1329850988 1214 dbSNP
rs1409735318 1215 dbSNP
rs570515925 1216 dbSNP
rs1005856235 1217 dbSNP
rs955709279 1227 dbSNP
rs988811312 1235 dbSNP
rs776649215 1249 dbSNP
rs1476781238 1251 dbSNP
rs539412874 1263 dbSNP
rs964455587 1263 dbSNP
rs946887853 1276 dbSNP
rs866492313 1283 dbSNP
rs976265250 1285 dbSNP
rs192554084 1287 dbSNP
rs1043869552 1288 dbSNP
rs142048135 1289 dbSNP
rs938082753 1304 dbSNP
rs1255851231 1310 dbSNP
rs762139283 1315 dbSNP
rs1324133606 1325 dbSNP
rs765611043 1328 dbSNP
rs1217526857 1336 dbSNP
rs1056490223 1339 dbSNP
rs1375690797 1352 dbSNP
rs1280352807 1358 dbSNP
rs896494258 1363 dbSNP
rs568082932 1364 dbSNP
rs1339052039 1369 dbSNP
rs1470525870 1370 dbSNP
rs1004185364 1372 dbSNP
rs1405955167 1372 dbSNP
rs956316116 1374 dbSNP
rs150753607 1377 dbSNP
rs1177281911 1381 dbSNP
rs1469263272 1382 dbSNP
rs1236011034 1392 dbSNP
rs1189296012 1396 dbSNP
rs914832445 1398 dbSNP
rs558432141 1409 dbSNP
rs1448864708 1412 dbSNP
rs1044434154 1416 dbSNP
rs867412047 1417 dbSNP
rs377750429 1419 dbSNP
rs889563668 1426 dbSNP
rs1476415775 1429 dbSNP
rs938777146 1433 dbSNP
rs1171071039 1449 dbSNP
rs1453813787 1476 dbSNP
rs1008412316 1477 dbSNP
rs1382583476 1482 dbSNP
rs1056292293 1485 dbSNP
rs896270191 1498 dbSNP
rs763452873 1502 dbSNP
rs1401693953 1508 dbSNP
rs1415406404 1519 dbSNP
rs1019331612 1530 dbSNP
rs1339181576 1534 dbSNP
rs1445012892 1535 dbSNP
rs887715052 1536 dbSNP
rs1386892998 1540 dbSNP
rs1435070327 1541 dbSNP
rs1486779671 1541 dbSNP
rs539397444 1544 dbSNP
rs1242667731 1545 dbSNP
rs955905798 1547 dbSNP
rs1017254747 1548 dbSNP
rs1327710548 1549 dbSNP
rs575737475 1551 dbSNP
rs371170468 1563 dbSNP
rs1294206593 1565 dbSNP
rs184597233 1566 dbSNP
rs1021200962 1570 dbSNP
rs766775654 1571 dbSNP
rs968262247 1579 dbSNP
rs535721360 1580 dbSNP
rs926773099 1581 dbSNP
rs1209324522 1590 dbSNP
rs1358148529 1616 dbSNP
rs938167414 1616 dbSNP
rs1424837902 1620 dbSNP
rs956366122 1628 dbSNP
rs572963461 1629 dbSNP
rs992662728 1633 dbSNP
rs540346658 1637 dbSNP
rs917972152 1638 dbSNP
rs968980914 1644 dbSNP
rs1377135266 1659 dbSNP
rs1271063045 1661 dbSNP
rs139086424 1672 dbSNP
rs1178820403 1675 dbSNP
rs1037028771 1683 dbSNP
rs760064428 1687 dbSNP
rs1207035174 1694 dbSNP
rs927312303 1695 dbSNP
rs938777587 1696 dbSNP
rs1217268161 1702 dbSNP
rs529278165 1703 dbSNP
rs541744170 1704 dbSNP
rs1321829848 1721 dbSNP
rs1405065599 1724 dbSNP
rs6710754 1733 dbSNP
rs1291479951 1738 dbSNP
rs1459892375 1738 dbSNP
rs745713712 1738 dbSNP
rs1384575760 1739 dbSNP
rs1047579384 1742 dbSNP
rs1354965263 1742 dbSNP
rs573629577 1747 dbSNP
rs1019059025 1752 dbSNP
rs1200191903 1752 dbSNP
rs79329208 1754 dbSNP
rs1331169065 1755 dbSNP
rs1225019885 1756 dbSNP
rs1038675170 1758 dbSNP
rs1328260249 1759 dbSNP
rs189238999 1762 dbSNP
rs1262425297 1763 dbSNP
rs900140675 1767 dbSNP
rs12473680 1771 dbSNP
rs1264352429 1777 dbSNP
rs1209151536 1778 dbSNP
rs1030464034 1795 dbSNP
rs1019785084 1796 dbSNP
rs1021830358 1797 dbSNP
rs1373627577 1801 dbSNP
rs1330371547 1804 dbSNP
rs1463902134 1811 dbSNP
rs1408177782 1821 dbSNP
rs1177133465 1822 dbSNP
rs968951156 1825 dbSNP
rs1375932709 1827 dbSNP
rs891540659 1828 dbSNP
rs145605111 1829 dbSNP
rs1021231987 1833 dbSNP
rs1237834170 1835 dbSNP
rs968292927 1843 dbSNP
rs570675824 1845 dbSNP
rs374019794 1846 dbSNP
rs1244277040 1849 dbSNP
rs1033861363 1853 dbSNP
rs1034604202 1858 dbSNP
rs960285032 1859 dbSNP
rs181645561 1860 dbSNP
rs1317101477 1862 dbSNP
rs1308138284 1865 dbSNP
rs1444288897 1870 dbSNP
rs1436189388 1876 dbSNP
rs992339067 1880 dbSNP
rs918030462 1881 dbSNP
rs940108153 1884 dbSNP
rs546744143 1885 dbSNP
rs1305823978 1891 dbSNP
rs1157147592 1892 dbSNP
rs568045867 1893 dbSNP
rs376766310 1895 dbSNP
rs931274050 1918 dbSNP
rs1308954691 1922 dbSNP
rs1441145965 1926 dbSNP
rs1264523755 1927 dbSNP
rs1319676460 1936 dbSNP
rs1488362724 1938 dbSNP
rs1284859238 1943 dbSNP
rs1237418429 1953 dbSNP
rs758233416 1965 dbSNP
rs1049680716 1973 dbSNP
rs1361164761 1975 dbSNP
rs889671067 1982 dbSNP
rs930107237 1983 dbSNP
rs943907423 1984 dbSNP
rs1040874467 1987 dbSNP
rs891567134 1988 dbSNP
rs1009967618 1990 dbSNP
rs1296425955 1995 dbSNP
rs1426726043 1997 dbSNP
rs1249898949 1999 dbSNP
rs535472199 2000 dbSNP
rs1042761869 2001 dbSNP
rs909091304 2002 dbSNP
rs904207580 2007 dbSNP
rs147720083 2009 dbSNP
rs543138218 2011 dbSNP
rs1194598829 2012 dbSNP
rs1477781920 2014 dbSNP
rs1253170732 2015 dbSNP
rs10933616 2016 dbSNP
rs539756585 2025 dbSNP
rs959643948 2027 dbSNP
rs112147598 2028 dbSNP
rs1290195480 2029 dbSNP
rs1208995636 2031 dbSNP
rs866096749 2032 dbSNP
rs1219095348 2037 dbSNP
rs768561170 2047 dbSNP
rs1369505223 2048 dbSNP
rs1426019401 2050 dbSNP
rs374108683 2056 dbSNP
rs1166245638 2062 dbSNP
rs1339777853 2064 dbSNP
rs1276335141 2067 dbSNP
rs565300599 2069 dbSNP
rs765744455 2071 dbSNP
rs1323205049 2072 dbSNP
rs748302549 2075 dbSNP
rs1299494553 2076 dbSNP
rs1398999626 2078 dbSNP
rs891524830 2079 dbSNP
rs972826855 2081 dbSNP
rs1376737777 2089 dbSNP
rs1422144198 2090 dbSNP
rs540308473 2091 dbSNP
rs147949603 2095 dbSNP
rs1197809423 2098 dbSNP
rs1313358962 2103 dbSNP
rs1449521381 2108 dbSNP
rs1384823163 2112 dbSNP
rs1226082480 2114 dbSNP
rs1272649545 2118 dbSNP
rs573689703 2129 dbSNP
rs1256130217 2131 dbSNP
rs1021799339 2132 dbSNP
rs904652385 2134 dbSNP
rs952693501 2141 dbSNP
rs544642086 2142 dbSNP
rs911162509 2143 dbSNP
rs1465468384 2145 dbSNP
rs1398708794 2146 dbSNP
rs943955514 2151 dbSNP
rs1001717024 2156 dbSNP
rs1425179050 2157 dbSNP
rs1171500266 2160 dbSNP
rs186926316 2162 dbSNP
rs1234289802 2165 dbSNP
rs913081248 2169 dbSNP
rs763362640 2170 dbSNP
rs960344157 2172 dbSNP
rs993225472 2178 dbSNP
rs1205408649 2182 dbSNP
rs530799505 2188 dbSNP
rs1277939399 2190 dbSNP
rs1217574242 2199 dbSNP
rs1353073961 2201 dbSNP
rs545800366 2207 dbSNP
rs1447037272 2210 dbSNP
rs951546136 2215 dbSNP
rs1375233006 2220 dbSNP
rs1339110709 2222 dbSNP
rs945852281 2228 dbSNP
rs563194368 2229 dbSNP
rs1332889863 2230 dbSNP
rs904281103 2232 dbSNP
rs1172113049 2235 dbSNP
rs541630661 2236 dbSNP
rs1357013187 2237 dbSNP
rs1158939568 2242 dbSNP
rs1438695721 2246 dbSNP
rs1465360004 2252 dbSNP
rs189783230 2253 dbSNP
rs181106301 2254 dbSNP
rs760106293 2260 dbSNP
rs1483511940 2262 dbSNP
rs369090208 2265 dbSNP
rs1236875854 2266 dbSNP
rs1025620939 2269 dbSNP
rs961575902 2271 dbSNP
rs1448872353 2279 dbSNP
rs367972395 2282 dbSNP
rs568205018 2286 dbSNP
rs1351800870 2287 dbSNP
rs994297175 2289 dbSNP
rs1027110752 2298 dbSNP
rs952764618 2304 dbSNP
rs113928158 2314 dbSNP
rs1361818151 2315 dbSNP
rs911205422 2316 dbSNP
rs376610399 2322 dbSNP
rs1418660717 2327 dbSNP
rs1358264662 2337 dbSNP
rs1209661267 2338 dbSNP
rs1424227706 2343 dbSNP
rs1412959689 2346 dbSNP
rs976706928 2347 dbSNP
rs1264194986 2353 dbSNP
rs1128152 2359 dbSNP
rs568779501 2360 dbSNP
rs1216016413 2368 dbSNP
rs1247892623 2369 dbSNP
rs1487409145 2374 dbSNP
rs1294276153 2376 dbSNP
rs750102665 2379 dbSNP
rs1187691522 2381 dbSNP
rs1216772623 2385 dbSNP
rs1341700686 2395 dbSNP
rs781514301 2397 dbSNP
rs148936529 2403 dbSNP
rs925735880 2413 dbSNP
rs1398889834 2416 dbSNP
rs1337928899 2425 dbSNP
rs937075238 2426 dbSNP
rs1176685431 2429 dbSNP
rs1055928799 2433 dbSNP
rs1349021607 2437 dbSNP
rs895498009 2438 dbSNP
rs1266100593 2440 dbSNP
rs1424287921 2441 dbSNP
rs949717313 2442 dbSNP
rs1455408119 2445 dbSNP
rs551687787 2450 dbSNP
rs1476911920 2455 dbSNP
rs1046645515 2457 dbSNP
rs896050598 2458 dbSNP
rs1488284292 2461 dbSNP
rs566708741 2464 dbSNP
rs758057532 2465 dbSNP
rs1207100695 2468 dbSNP
rs897407930 2469 dbSNP
rs1014549444 2477 dbSNP
rs1319170196 2479 dbSNP
rs994371181 2480 dbSNP
rs73108005 2483 dbSNP
rs1431579829 2484 dbSNP
rs888555257 2485 dbSNP
rs1365547826 2489 dbSNP
rs1366498896 2491 dbSNP
rs1005518943 2492 dbSNP
rs1284116048 2498 dbSNP
rs563729879 2499 dbSNP
rs1169954313 2505 dbSNP
rs1464132111 2509 dbSNP
rs1379379384 2512 dbSNP
rs1176906862 2526 dbSNP
rs1471589289 2530 dbSNP
rs964118174 2530 dbSNP
rs190900352 2534 dbSNP
rs974533734 2535 dbSNP
rs1238097545 2539 dbSNP
rs183477886 2539 dbSNP
rs1197227846 2540 dbSNP
rs1257194373 2542 dbSNP
rs751368316 2542 dbSNP
rs1233378923 2546 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 285193.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714646. RNA binding protein: AGO2. Condition:mildMNase ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ucggucGGUUGAGUGUCACGUcu 5'
                ||::||  || ||||  
Target 5' gcaaucCCGGCU--CACUGCAac 3'
 		8 - 28
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714646
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / mildMNase, repA
Location of target site ENST00000405954.1 | 3UTR | CAGUGGCGCAAUCCCGGCUCACUGCAACCUCCGCCUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
296 hsa-miR-4793-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT092332 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT131237 ATG2A autophagy related 2A 2 2
MIRT145926 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT206559 SOCS5 suppressor of cytokine signaling 5 2 8
MIRT226455 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT337662 ZNF695 zinc finger protein 695 2 2
MIRT405828 SIX4 SIX homeobox 4 2 2
MIRT455113 RILPL1 Rab interacting lysosomal protein like 1 2 2
MIRT456756 TMEM239 transmembrane protein 239 2 4
MIRT457974 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT458173 LYRM4 LYR motif containing 4 2 4
MIRT458245 SLC9A7 solute carrier family 9 member A7 2 2
MIRT466145 TMEM120B transmembrane protein 120B 2 2
MIRT474981 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT475601 HMGB2 high mobility group box 2 2 4
MIRT480759 BMP3 bone morphogenetic protein 3 2 4
MIRT481156 AVL9 AVL9 cell migration associated 2 2
MIRT482155 AK2 adenylate kinase 2 2 2
MIRT488386 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT496575 KIF18B kinesin family member 18B 2 2
MIRT498411 TXNDC16 thioredoxin domain containing 16 2 4
MIRT504547 ZNF417 zinc finger protein 417 2 6
MIRT505417 TCF7L2 transcription factor 7 like 2 2 2
MIRT509349 ALDH9A1 aldehyde dehydrogenase 9 family member A1 2 6
MIRT512164 CD164 CD164 molecule 2 6
MIRT517238 PRIM1 DNA primase subunit 1 2 2
MIRT518671 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT519298 MLH1 mutL homolog 1 2 2
MIRT523662 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT525452 GPATCH2L G-patch domain containing 2 like 2 2
MIRT539847 ZNF766 zinc finger protein 766 2 2
MIRT540076 SSH3 slingshot protein phosphatase 3 2 2
MIRT540320 PIGR polymeric immunoglobulin receptor 2 2
MIRT540548 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT540759 UTP6 UTP6, small subunit processome component 2 2
MIRT541545 HIATL2 major facilitator superfamily domain containing 14C 2 2
MIRT541553 SLC35E1 solute carrier family 35 member E1 2 2
MIRT541666 ATP8B3 ATPase phospholipid transporting 8B3 2 4
MIRT541722 TFDP2 transcription factor Dp-2 2 2
MIRT541800 DUSP28 dual specificity phosphatase 28 2 2
MIRT541816 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT541907 VWA7 von Willebrand factor A domain containing 7 2 2
MIRT542154 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT542207 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542233 FUT9 fucosyltransferase 9 2 2
MIRT542320 SERPING1 serpin family G member 1 2 2
MIRT542369 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT542476 APOC3 apolipoprotein C3 2 2
MIRT542641 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT542660 TAF11 TATA-box binding protein associated factor 11 2 2
MIRT542749 PRRG4 proline rich and Gla domain 4 2 4
MIRT542789 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT545442 FGFRL1 fibroblast growth factor receptor like 1 2 2
MIRT546206 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT552270 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552655 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT554134 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT556795 KIAA1958 KIAA1958 2 2
MIRT564762 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT569428 STX7 syntaxin 7 2 2
MIRT573245 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT607390 LANCL3 LanC like 3 2 2
MIRT607430 NOTCH2NL notch 2 N-terminal like 2 2
MIRT607452 ZNF543 zinc finger protein 543 2 2
MIRT607580 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT607748 ANGPT4 angiopoietin 4 2 2
MIRT607907 SPRYD4 SPRY domain containing 4 2 2
MIRT608703 GMPR guanosine monophosphate reductase 2 2
MIRT612127 NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 2 2
MIRT612786 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT616692 LPL lipoprotein lipase 2 2
MIRT617045 ZNF610 zinc finger protein 610 2 2
MIRT617091 ZNF43 zinc finger protein 43 2 2
MIRT617314 MBOAT1 membrane bound O-acyltransferase domain containing 1 2 2
MIRT617355 MELK maternal embryonic leucine zipper kinase 2 2
MIRT617486 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT617579 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT617669 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT617722 TRAPPC2 trafficking protein particle complex 2 2 4
MIRT617893 PTCHD3 patched domain containing 3 2 2
MIRT617982 ZNF234 zinc finger protein 234 2 4
MIRT618434 MYLK3 myosin light chain kinase 3 2 4
MIRT618732 HIST1H2AH histone cluster 1 H2A family member h 2 2
MIRT619045 CASS4 Cas scaffolding protein family member 4 2 2
MIRT619573 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT619671 CYP1A2 cytochrome P450 family 1 subfamily A member 2 2 2
MIRT619887 ABHD17B abhydrolase domain containing 17B 2 2
MIRT620519 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT620535 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT620996 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT621304 YIPF4 Yip1 domain family member 4 2 2
MIRT622086 SRPX2 sushi repeat containing protein, X-linked 2 2 2
MIRT622168 SMYD1 SET and MYND domain containing 1 2 2
MIRT622543 PXMP4 peroxisomal membrane protein 4 2 2
MIRT622761 PGM3 phosphoglucomutase 3 2 2
MIRT622885 PDCL3 phosducin like 3 2 4
MIRT623130 NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 2 2
MIRT624840 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT625047 MBD3 methyl-CpG binding domain protein 3 2 2
MIRT625059 ZNF556 zinc finger protein 556 2 2
MIRT625508 PPAPDC1A phospholipid phosphatase 4 2 2
MIRT625573 ANKRD42 ankyrin repeat domain 42 2 2
MIRT626133 SNRNP48 small nuclear ribonucleoprotein U11/U12 subunit 48 2 2
MIRT626327 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT626765 CDC14B cell division cycle 14B 2 2
MIRT626798 CSE1L chromosome segregation 1 like 2 2
MIRT627212 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT627225 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT627256 XKR4 XK related 4 2 2
MIRT628190 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT628466 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT628627 CCT4 chaperonin containing TCP1 subunit 4 2 2
MIRT629040 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT630847 ACACB acetyl-CoA carboxylase beta 2 2
MIRT631721 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT632264 USP1 ubiquitin specific peptidase 1 2 4
MIRT632571 POLQ DNA polymerase theta 2 2
MIRT633992 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635211 ZNF286A zinc finger protein 286A 2 4
MIRT635249 ELOVL6 ELOVL fatty acid elongase 6 2 4
MIRT635261 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT635283 GK5 glycerol kinase 5 (putative) 2 2
MIRT635663 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT636251 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT636564 EPB41 erythrocyte membrane protein band 4.1 2 2
MIRT636814 TBC1D24 TBC1 domain family member 24 2 2
MIRT637358 ZNF460 zinc finger protein 460 2 2
MIRT637473 DEFB105B defensin beta 105B 2 4
MIRT637505 DEFB105A defensin beta 105A 2 4
MIRT637861 SC5D sterol-C5-desaturase 2 2
MIRT638080 ZNF652 zinc finger protein 652 2 2
MIRT638096 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT638174 TMED4 transmembrane p24 trafficking protein 4 2 2
MIRT638201 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT638278 SH2B3 SH2B adaptor protein 3 2 2
MIRT638714 FUT11 fucosyltransferase 11 2 2
MIRT638852 CLMP CXADR like membrane protein 2 2
MIRT639815 TMED8 transmembrane p24 trafficking protein family member 8 2 2
MIRT640879 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT640937 FAM129A family with sequence similarity 129 member A 2 2
MIRT640971 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT641642 GNAZ G protein subunit alpha z 2 2
MIRT641931 SLC25A16 solute carrier family 25 member 16 2 2
MIRT642136 CRY2 cryptochrome circadian clock 2 2 2
MIRT643199 JAK3 Janus kinase 3 2 2
MIRT643256 ZNF566 zinc finger protein 566 2 2
MIRT643378 TRIM16L tripartite motif containing 16 like 2 2
MIRT643683 AMER3 APC membrane recruitment protein 3 2 2
MIRT643728 MCMDC2 minichromosome maintenance domain containing 2 2 2
MIRT643949 CCDC141 coiled-coil domain containing 141 2 2
MIRT644915 SERF1B small EDRK-rich factor 1B 2 2
MIRT645163 NOL9 nucleolar protein 9 2 2
MIRT645547 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT645550 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT645572 TACR2 tachykinin receptor 2 2 2
MIRT646697 SERF1A small EDRK-rich factor 1A 2 2
MIRT647806 FRMD8 FERM domain containing 8 2 2
MIRT647903 CIRH1A UTP4, small subunit processome component 2 2
MIRT648978 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT649907 SLFN12L schlafen family member 12 like 2 2
MIRT650224 SIGLEC9 sialic acid binding Ig like lectin 9 2 4
MIRT651880 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT651935 UBN1 ubinuclein 1 2 2
MIRT652839 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT652994 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT654800 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655591 OTUD7B OTU deubiquitinase 7B 2 2
MIRT658760 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT659358 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT660717 AMER1 APC membrane recruitment protein 1 2 2
MIRT660737 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT661088 TMEM145 transmembrane protein 145 2 2
MIRT661176 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT662005 ZNF445 zinc finger protein 445 2 2
MIRT662178 KIAA1210 KIAA1210 2 2
MIRT662270 OR51E2 olfactory receptor family 51 subfamily E member 2 2 2
MIRT663046 SLC16A4 solute carrier family 16 member 4 2 2
MIRT663476 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT664039 RPL27A ribosomal protein L27a 2 2
MIRT664096 ZDHHC24 zinc finger DHHC-type containing 24 2 2
MIRT664109 FUT1 fucosyltransferase 1 (H blood group) 2 2
MIRT664317 CD209 CD209 molecule 2 2
MIRT664455 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT664595 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 4
MIRT664694 DBF4 DBF4 zinc finger 2 2
MIRT665162 SF3A1 splicing factor 3a subunit 1 2 2
MIRT665214 RBM22 RNA binding motif protein 22 2 2
MIRT665254 ZNF286B zinc finger protein 286B 2 2
MIRT665268 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT665606 TTC39A tetratricopeptide repeat domain 39A 2 2
MIRT665830 TIMELESS timeless circadian clock 2 2
MIRT666201 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 2 2
MIRT666546 RNF115 ring finger protein 115 2 2
MIRT666602 REEP3 receptor accessory protein 3 2 2
MIRT666862 POU2F3 POU class 2 homeobox 3 2 4
MIRT666886 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT667158 NRXN3 neurexin 3 2 2
MIRT667252 NEK9 NIMA related kinase 9 2 2
MIRT667419 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT667434 METTL8 methyltransferase like 8 2 2
MIRT668023 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT668062 GPR75 G protein-coupled receptor 75 2 2
MIRT668070 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT668607 EHD4 EH domain containing 4 2 4
MIRT668694 DNAL1 dynein axonemal light chain 1 2 2
MIRT668782 DAAM1 dishevelled associated activator of morphogenesis 1 2 2
MIRT669037 CHEK1 checkpoint kinase 1 2 2
MIRT669044 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT669156 CCNG1 cyclin G1 2 2
MIRT670090 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT670206 SLC24A4 solute carrier family 24 member 4 2 2
MIRT672488 FUS FUS RNA binding protein 2 2
MIRT673830 SLC11A2 solute carrier family 11 member 2 2 2
MIRT675481 VEGFC vascular endothelial growth factor C 2 2
MIRT675634 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT677913 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678420 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678626 OLFML2A olfactomedin like 2A 2 2
MIRT678791 NUPL2 nucleoporin like 2 2 2
MIRT679561 LIN9 lin-9 DREAM MuvB core complex component 2 2
MIRT680743 CA5B carbonic anhydrase 5B 2 2
MIRT682481 LIX1L limb and CNS expressed 1 like 2 4
MIRT682701 PSMD9 proteasome 26S subunit, non-ATPase 9 2 2
MIRT682759 MDM2 MDM2 proto-oncogene 2 2
MIRT682811 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT682847 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT682896 XIAP X-linked inhibitor of apoptosis 2 2
MIRT682916 FAM73A mitoguardin 1 2 2
MIRT682935 ZNF292 zinc finger protein 292 2 2
MIRT682953 RPL12 ribosomal protein L12 2 2
MIRT682972 NF2 neurofibromin 2 2 2
MIRT683033 SUSD5 sushi domain containing 5 2 2
MIRT683081 A1BG alpha-1-B glycoprotein 2 2
MIRT683105 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT686640 TMEM184C transmembrane protein 184C 2 2
MIRT687444 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT688401 EMC8 ER membrane protein complex subunit 8 2 2
MIRT688886 C3orf70 chromosome 3 open reading frame 70 2 2
MIRT689148 IRAK1BP1 interleukin 1 receptor associated kinase 1 binding protein 1 2 2
MIRT689234 RPS19 ribosomal protein S19 2 2
MIRT689306 C5AR2 complement component 5a receptor 2 2 2
MIRT689364 ZNF101 zinc finger protein 101 2 2
MIRT689498 SCARF1 scavenger receptor class F member 1 2 2
MIRT689655 RBM23 RNA binding motif protein 23 2 2
MIRT689897 SOD2 superoxide dismutase 2 2 2
MIRT690150 PPIL6 peptidylprolyl isomerase like 6 2 2
MIRT690601 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690805 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT690946 GLG1 golgi glycoprotein 1 2 2
MIRT691388 ATP13A4 ATPase 13A4 2 2
MIRT691408 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT692175 LRRC3C leucine rich repeat containing 3C 2 2
MIRT692235 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT693283 GINM1 glycoprotein integral membrane 1 2 2
MIRT693439 TPGS1 tubulin polyglutamylase complex subunit 1 2 2
MIRT693460 HIST1H2AG histone cluster 1 H2A family member g 2 2
MIRT693768 ZNF383 zinc finger protein 383 2 2
MIRT694018 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694236 ZNF749 zinc finger protein 749 2 2
MIRT694321 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT694347 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT694430 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT695763 WDR35 WD repeat domain 35 2 2
MIRT696167 TIPIN TIMELESS interacting protein 2 2
MIRT696417 DOCK7 dedicator of cytokinesis 7 2 2
MIRT696543 C3 complement C3 2 2
MIRT696998 CCDC80 coiled-coil domain containing 80 2 2
MIRT697232 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697806 UBXN2A UBX domain protein 2A 2 2
MIRT697944 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT698161 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT698778 STK4 serine/threonine kinase 4 2 2
MIRT700259 RBM12B RNA binding motif protein 12B 2 2
MIRT700970 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT701251 NUP35 nucleoporin 35 2 2
MIRT701607 MYPN myopalladin 2 2
MIRT702457 KIAA1467 family with sequence similarity 234 member B 2 2
MIRT702613 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT702691 IRGQ immunity related GTPase Q 2 2
MIRT702934 HMX3 H6 family homeobox 3 2 2
MIRT702991 HERPUD2 HERPUD family member 2 2 2
MIRT703148 GPR137C G protein-coupled receptor 137C 2 2
MIRT703980 EMC1 ER membrane protein complex subunit 1 2 2
MIRT704569 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT705065 C4orf32 family with sequence similarity 241 member A 2 2
MIRT705447 ATL2 atlastin GTPase 2 2 2
MIRT705856 AFF3 AF4/FMR2 family member 3 2 2
MIRT705886 ADIPOR2 adiponectin receptor 2 2 2
MIRT714370 HP1BP3 heterochromatin protein 1 binding protein 3 2 2
MIRT715784 PHF12 PHD finger protein 12 2 2
MIRT715864 KIAA0101 PCNA clamp associated factor 2 2
MIRT715947 NUP93 nucleoporin 93 2 2
MIRT716132 THOC5 THO complex 5 2 2
MIRT717084 EBF4 early B-cell factor 4 2 2
MIRT725424 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 2
MIRT736091 GREM1 gremlin 1, DAN family BMP antagonist 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4793 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-miR-4793-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-4793-3p Doxorubicin 31703 NSC123127 approved resistant cell line (BAS)
hsa-miR-4793-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)

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