miRTarBase - #MIRT542544


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pre-miRNA Information
pre-miRNA hsa-mir-6818   
Genomic Coordinates chr22: 30007049 - 30007113
Description Homo sapiens miR-6818 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6818-3p
Sequence 44| UUGUCUCUUGUUCCUCACACAG |65
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1325627700 2 dbSNP
rs750902684 3 dbSNP
rs756542190 6 dbSNP
rs1365035732 17 dbSNP
Putative Targets

Gene Information
Gene Symbol MRPS10   
Synonyms MRP-S10, PNAS-122
Description mitochondrial ribosomal protein S10
Transcript NM_018141   
Expression
Putative miRNA Targets on MRPS10
3'UTR of MRPS10
(miRNA target sites are highlighted)		 
>MRPS10|NM_018141|3'UTR
   1 AGCCTCAGGGAGGCCATTTTTGCCTAAATTTGAAATGAGGGTGGGCCAGATGAGTATGTTTAAGTGGAGAGTGCTTCCAG
  81 CTGAGATGATTTGAGTCTGCCCTAACTGCTCCATTGAGTTCTCGTGCCCTCATCAGCTGAGGGCAGGGAATGGAACTTTA
 161 ATGGAAGAACCACTTTTATCTATTCTTTTTATTCATTGTTTCAGTTCTGATTTCAGCAAACATGAGCAAACCACTTTGAC
 241 TGAAAGCAGAAAGAGTGAAAATTCTATTTTGTTACGCTACTGGTGTTCAATTATTAGTTTGTACCATTTTTAATTTATGT
 321 CAGTTGATGCATCTGAAAATAAGTGCTTGGAGTGTTCGTACCCTTATTTTTTTTTAAGATTCCTAGAAGGAATCTTTGGT
 401 TAATTCAGATTGAGCAGTTAAAGTTTTTGCTATTTACCTTTGTGCAGGCTGGCATATGCTAATTTGGGGGTGGTAACCAA
 481 CCGATTTTATCTCATGTAAGCATTACATTTTGAAGACTGAATATACTTCACAGCAGATCAAACACATTTATGGCATGCAC
 561 TGACCTCTTCTTGGAGCCCAGAACTTTATAGAGTTGCCTACCAGGGTTACTGTAATGGAATTTATGATCTTAAGAAATTA
 641 CTAGTTGTATTATTTATCCTATGATTCATTCATTCAATAAGCTTTTACTGCATAAACTTTACATCCAGCACTGTAGTTAA
 721 GTACCCAAAATTGAATAGAAATAATGGCTTTTGAAAATCGCACAAAGCAGGCCAGGCACGGTGGCTCACGCCTGTAATCC
 801 CAGCATTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTCAAGAGATCCAGACCATCCTGGCTAACACGGTGAAACCCCGT
 881 CTCTAATAAAAATACAAAAATTAGCTGGACATGGTGGCACGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAG
 961 AATTGCGTGAACCCGGGCCCGGTGGAGGCTGCAGTGAGACGAGATCGCGCCACTGCACTCCAGCCTGGCGACAGAGCGAG
1041 ACGCCGTCTCAAAAAAAAAAAAAGAAAATTGTGCAAAGCATAGGTAAATATTTTTCTTTATTAAGCTTCTCACTGAGAAG
1121 CCCTCTTTATTTTGGTAAATGTCACTCTGTTTGTTAGGAGATGTCTGCTTTTCCATGAAATGAAATAGTGGCTAAAGCCC
1201 TGAAAGAGGCAAGACTACAATGGGCTGAAACAGTTGGTATAGCAACCCCAGAGAAGTGCTTCATTTTCTTTTTATAGTAG
1281 AAGCAGGTCCATGTCTTTTGTGGTTTCCTGCACATCTTTGGAGTAGTTATGACTTCTCAGTTTTTCCCCCCTTAAACTGC
1361 ATTGCCTATTCTTTTTTCCTGACATGCTATCAGGTATCAGTGTGTTGAATACATACTGCTTGTGTATCAGACTTACGTTA
1441 CTGTCATCACCATTAAAAGAATTGCAGCTTTGTGCCCCATGACCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaCAC--ACUCCUUG---UUCUCUGUu 5'
            |||  | | |  |   |||||:|| 
Target 5' taGTGGCTAAAGCCCTGAAAGAGGCAa 3'
 1186 - 1212 130.00 -14.70
2 
miRNA  3' gacacaCUCCUUGUUCUCUGuu 5'
                ||||  |||||||:  
Target 5' gatcacGAGG-TCAAGAGATcc 3'
 828 - 848 123.00 -14.30
3 
miRNA  3' gaCACACUCCUU--GUUCUCUguu 5'
            || | || ||  | |||||   
Target 5' tgGTAT-AGCAACCCCAGAGAagt 3'
 1235 - 1257 113.00 -5.02
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30125937 91 COSMIC
COSN30125944 93 COSMIC
COSN30456537 121 COSMIC
COSN17182152 131 COSMIC
COSN31508647 156 COSMIC
COSN30163706 167 COSMIC
COSN30499281 185 COSMIC
COSN31573613 194 COSMIC
COSN30462430 202 COSMIC
COSN30159902 214 COSMIC
COSN20487711 554 COSMIC
COSN16276118 615 COSMIC
COSN17005289 964 COSMIC
COSN20102841 1050 COSMIC
COSN16396673 1287 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs762380857 2 dbSNP
rs188762459 4 dbSNP
rs1045653402 6 dbSNP
rs771457195 6 dbSNP
rs769089129 13 dbSNP
rs776380099 16 dbSNP
rs1189222378 25 dbSNP
rs917938048 31 dbSNP
rs1197196813 36 dbSNP
rs1470067189 41 dbSNP
rs770726801 46 dbSNP
rs746687007 48 dbSNP
rs777302702 50 dbSNP
rs1216377260 54 dbSNP
rs1362982894 68 dbSNP
rs959472833 73 dbSNP
rs1403526565 80 dbSNP
rs542266910 94 dbSNP
rs1348999006 96 dbSNP
rs11618 100 dbSNP
rs1299389241 102 dbSNP
rs979605498 107 dbSNP
rs1409156564 108 dbSNP
rs560061668 113 dbSNP
rs9471805 117 dbSNP
rs1167765449 121 dbSNP
rs1021587683 123 dbSNP
rs1423934014 124 dbSNP
rs1308318174 131 dbSNP
rs1206812533 132 dbSNP
rs1249724526 133 dbSNP
rs1482796868 145 dbSNP
rs1211645117 148 dbSNP
rs1260307657 154 dbSNP
rs1008490669 164 dbSNP
rs577849219 177 dbSNP
rs1270854142 189 dbSNP
rs955198448 195 dbSNP
rs1428778727 207 dbSNP
rs1480293868 210 dbSNP
rs372365869 212 dbSNP
rs1428589373 213 dbSNP
rs547456048 223 dbSNP
rs139604808 233 dbSNP
rs1038132454 237 dbSNP
rs1283391484 244 dbSNP
rs1362353322 253 dbSNP
rs746247324 255 dbSNP
rs150834133 258 dbSNP
rs1252265911 265 dbSNP
rs1341714571 266 dbSNP
rs1347612480 274 dbSNP
rs575469841 275 dbSNP
rs555605966 276 dbSNP
rs535925150 279 dbSNP
rs1243075945 283 dbSNP
rs1487081722 290 dbSNP
rs1046031989 294 dbSNP
rs1388009449 329 dbSNP
rs950027105 331 dbSNP
rs1391157740 345 dbSNP
rs566885167 346 dbSNP
rs917894486 347 dbSNP
rs1333377684 349 dbSNP
rs546949054 357 dbSNP
rs1300373443 358 dbSNP
rs1364745525 363 dbSNP
rs1235211889 365 dbSNP
rs1305758629 367 dbSNP
rs925338459 376 dbSNP
rs979491335 376 dbSNP
rs1463070565 382 dbSNP
rs1400321875 388 dbSNP
rs1319249211 408 dbSNP
rs1175072433 410 dbSNP
rs1467969707 411 dbSNP
rs967258915 427 dbSNP
rs1430935881 429 dbSNP
rs914100491 433 dbSNP
rs539495080 435 dbSNP
rs1423338041 436 dbSNP
rs1171477226 438 dbSNP
rs1408699560 439 dbSNP
rs1402311507 445 dbSNP
rs1418243396 452 dbSNP
rs1248374844 468 dbSNP
rs1328228760 470 dbSNP
rs1178813432 475 dbSNP
rs571513636 482 dbSNP
rs1280198928 494 dbSNP
rs1376184089 500 dbSNP
rs368400750 508 dbSNP
rs368176710 520 dbSNP
rs1267932731 521 dbSNP
rs975041177 522 dbSNP
rs139189679 524 dbSNP
rs1291660030 529 dbSNP
rs1201815827 531 dbSNP
rs1193319478 537 dbSNP
rs531112673 540 dbSNP
rs1232882838 541 dbSNP
rs1471136755 545 dbSNP
rs147269851 546 dbSNP
rs1411117630 555 dbSNP
rs1440728855 565 dbSNP
rs1256760379 573 dbSNP
rs1238819535 577 dbSNP
rs1315432693 581 dbSNP
rs1309805309 585 dbSNP
rs1016670001 588 dbSNP
rs1448245138 590 dbSNP
rs1382692174 591 dbSNP
rs1356630265 597 dbSNP
rs548392712 598 dbSNP
rs1282726461 600 dbSNP
rs185860822 605 dbSNP
rs560020843 610 dbSNP
rs1449812724 618 dbSNP
rs34526507 622 dbSNP
rs1014585118 643 dbSNP
rs1251073996 650 dbSNP
rs1475488022 657 dbSNP
rs1189382759 661 dbSNP
rs894428510 667 dbSNP
rs148140178 677 dbSNP
rs1168663965 679 dbSNP
rs1361903703 683 dbSNP
rs1398882679 690 dbSNP
rs937976585 694 dbSNP
rs1161010137 697 dbSNP
rs903884251 700 dbSNP
rs1440279688 714 dbSNP
rs201535055 719 dbSNP
rs1376602265 721 dbSNP
rs564080570 731 dbSNP
rs1332641761 738 dbSNP
rs143747378 747 dbSNP
rs6929797 759 dbSNP
rs914052821 760 dbSNP
rs115545199 767 dbSNP
rs1225622881 771 dbSNP
rs934160477 776 dbSNP
rs1485962262 779 dbSNP
rs1202070717 780 dbSNP
rs529476702 782 dbSNP
rs975679953 790 dbSNP
rs1193598757 794 dbSNP
rs3199638 806 dbSNP
rs1241289574 809 dbSNP
rs1168038465 812 dbSNP
rs1359419480 817 dbSNP
rs553231900 826 dbSNP
rs540284697 827 dbSNP
rs1402078731 828 dbSNP
rs79038000 830 dbSNP
rs1383193697 831 dbSNP
rs138935030 833 dbSNP
rs192264130 834 dbSNP
rs951203455 840 dbSNP
rs550581489 845 dbSNP
rs1225729169 846 dbSNP
rs1296272924 867 dbSNP
rs1381366734 871 dbSNP
rs1382283188 872 dbSNP
rs1299856541 877 dbSNP
rs1347911837 878 dbSNP
rs1234758663 879 dbSNP
rs1420028665 881 dbSNP
rs1024552034 886 dbSNP
rs1205513440 887 dbSNP
rs1249587055 892 dbSNP
rs1014057003 899 dbSNP
rs537310971 907 dbSNP
rs1253841075 908 dbSNP
rs1446535759 909 dbSNP
rs374575514 911 dbSNP
rs1377614220 913 dbSNP
rs1161832110 914 dbSNP
rs1369188278 920 dbSNP
rs186760409 921 dbSNP
rs1427003025 932 dbSNP
rs367588664 952 dbSNP
rs60829428 960 dbSNP
rs3199639 964 dbSNP
rs566556181 965 dbSNP
rs945443945 966 dbSNP
rs546338145 967 dbSNP
rs1225299479 973 dbSNP
rs1489580737 974 dbSNP
rs1189560235 975 dbSNP
rs541876676 975 dbSNP
rs1357663501 980 dbSNP
rs1051618243 981 dbSNP
rs1284318348 981 dbSNP
rs556776274 982 dbSNP
rs934151396 992 dbSNP
rs1166102414 994 dbSNP
rs533049792 1000 dbSNP
rs1226026295 1001 dbSNP
rs1350172673 1006 dbSNP
rs6929042 1007 dbSNP
rs146411328 1008 dbSNP
rs941618491 1021 dbSNP
rs909546662 1024 dbSNP
rs530802375 1029 dbSNP
rs1301048866 1030 dbSNP
rs761574257 1037 dbSNP
rs1391328429 1038 dbSNP
rs1323736752 1039 dbSNP
rs916968281 1042 dbSNP
rs9381159 1043 dbSNP
rs541998628 1045 dbSNP
rs1426090925 1046 dbSNP
rs1194578603 1050 dbSNP
rs71544255 1051 dbSNP
rs958505917 1061 dbSNP
rs1425206278 1063 dbSNP
rs1162315455 1064 dbSNP
rs1367497147 1064 dbSNP
rs1429909755 1064 dbSNP
rs150177931 1064 dbSNP
rs545945337 1064 dbSNP
rs1303245289 1066 dbSNP
rs1034167178 1067 dbSNP
rs1267285716 1068 dbSNP
rs1201999410 1069 dbSNP
rs1312330371 1070 dbSNP
rs1452740989 1071 dbSNP
rs1230783135 1073 dbSNP
rs1272501724 1080 dbSNP
rs1483031010 1083 dbSNP
rs1212158839 1108 dbSNP
rs114902303 1110 dbSNP
rs1194761944 1129 dbSNP
rs1412693956 1147 dbSNP
rs1020627544 1149 dbSNP
rs968638778 1149 dbSNP
rs1009530305 1153 dbSNP
rs61158488 1156 dbSNP
rs796681752 1156 dbSNP
rs1259605941 1161 dbSNP
rs992441935 1168 dbSNP
rs1360797337 1175 dbSNP
rs1051158733 1177 dbSNP
rs1218924470 1177 dbSNP
rs1366222210 1185 dbSNP
rs535379941 1190 dbSNP
rs190134395 1211 dbSNP
rs1341602740 1218 dbSNP
rs1219853658 1220 dbSNP
rs1438320890 1229 dbSNP
rs1331634248 1239 dbSNP
rs760551418 1240 dbSNP
rs1389753891 1249 dbSNP
rs545945854 1253 dbSNP
rs1171464740 1264 dbSNP
rs1465092916 1274 dbSNP
rs1245794320 1275 dbSNP
rs941586081 1275 dbSNP
rs1448393747 1276 dbSNP
rs910102087 1278 dbSNP
rs1412630423 1287 dbSNP
rs1175101219 1298 dbSNP
rs1174697166 1330 dbSNP
rs1478535976 1333 dbSNP
rs1458594259 1335 dbSNP
rs1046604 1336 dbSNP
rs1318827989 1339 dbSNP
rs1047766796 1343 dbSNP
rs1437350936 1346 dbSNP
rs1232813447 1348 dbSNP
rs929635931 1365 dbSNP
rs1366117424 1368 dbSNP
rs1180211625 1378 dbSNP
rs1440044899 1383 dbSNP
rs1219114016 1384 dbSNP
rs1239533796 1387 dbSNP
rs1269187298 1389 dbSNP
rs1331720392 1394 dbSNP
rs1198692380 1398 dbSNP
rs1265929639 1402 dbSNP
rs1322459106 1403 dbSNP
rs769424341 1413 dbSNP
rs8850 1416 dbSNP
rs992579759 1430 dbSNP
rs1220770115 1435 dbSNP
rs927119638 1436 dbSNP
rs1473487501 1447 dbSNP
rs1156666106 1448 dbSNP
rs978529742 1460 dbSNP
rs1278906187 1462 dbSNP
rs4714580 1469 dbSNP
rs760449689 1470 dbSNP
rs1289571386 1471 dbSNP
rs1352865000 1474 dbSNP
rs1227007864 1476 dbSNP
rs1010581532 1479 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 55173.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714646. RNA binding protein: AGO2. Condition:mildMNase ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions Prostate Tissue
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRX1760630. RNA binding protein: AGO2. Condition:AGO-CLIP-22RV1_A PAR-CLIP data was present in SRX1760631. RNA binding protein: AGO2. Condition:AGO-CLIP-22RV1_B ...

- Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al., 2016, Neoplasia (New York, N.Y.).

Article - Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al.
- Neoplasia (New York, N.Y.), 2016
MicroRNA (miRNA) deregulation in prostate cancer (PCa) contributes to PCa initiation and metastatic progression. To comprehensively define the cancer-associated changes in miRNA targeting and function in commonly studied models of PCa, we performed photoactivatable ribonucleoside-enhanced cross-linking immunoprecipitation of the Argonaute protein in a panel of PCa cell lines modeling different stages of PCa progression. Using this comprehensive catalogue of miRNA targets, we analyzed miRNA targeting on known drivers of PCa and examined tissue-specific and stage-specific pathway targeting by miRNAs. We found that androgen receptor is the most frequently targeted PCa oncogene and that miR-148a targets the largest number of known PCa drivers. Globally, tissue-specific and stage-specific changes in miRNA targeting are driven by homeostatic response to active oncogenic pathways. Our findings indicate that, even in advanced PCa, the miRNA pool adapts to regulate continuing alterations in the cancer genome to balance oncogenic molecular changes. These findings are important because they are the first to globally characterize miRNA changes in PCa and demonstrate how the miRNA target spectrum responds to staged tumorigenesis.
LinkOut: [PMID: 27292025]
CLIP-seq Support 1 for dataset GSM714646
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / mildMNase, repA
Location of target site ENST00000053468.3 | 3UTR | CAGAGUCUUGUUCUGUUGCCCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
150 hsa-miR-6818-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT112122 TIMM17A translocase of inner mitochondrial membrane 17A 2 6
MIRT262243 BAMBI BMP and activin membrane bound inhibitor 2 2
MIRT446689 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT449923 TPST2 tyrosylprotein sulfotransferase 2 2 2
MIRT464356 USP12P1 ubiquitin specific peptidase 12 pseudogene 1 2 2
MIRT485703 CBX7 chromobox 7 2 2
MIRT497478 XPR1 xenotropic and polytropic retrovirus receptor 1 2 4
MIRT499435 ODF2L outer dense fiber of sperm tails 2 like 2 8
MIRT514246 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT515032 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515065 PLA2G2C phospholipase A2 group IIC 2 2
MIRT520235 USP9X ubiquitin specific peptidase 9, X-linked 2 4
MIRT523685 FHL2 four and a half LIM domains 2 2 4
MIRT525524 FSIP2 fibrous sheath interacting protein 2 2 2
MIRT525838 FAR2 fatty acyl-CoA reductase 2 2 2
MIRT528583 PTGER3 prostaglandin E receptor 3 2 2
MIRT530404 SULT1B1 sulfotransferase family 1B member 1 2 2
MIRT530703 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT535118 PLSCR4 phospholipid scramblase 4 2 2
MIRT539880 IRGQ immunity related GTPase Q 2 2
MIRT540195 ARHGAP18 Rho GTPase activating protein 18 2 2
MIRT540938 SLC25A43 solute carrier family 25 member 43 2 2
MIRT541501 TOR1AIP1 torsin 1A interacting protein 1 2 2
MIRT542544 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT542559 ZNF280B zinc finger protein 280B 2 2
MIRT542689 RPS15A ribosomal protein S15a 2 2
MIRT548759 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 2
MIRT549735 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT553060 ULK1 unc-51 like autophagy activating kinase 1 2 2
MIRT556303 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT560816 DIP2A disco interacting protein 2 homolog A 2 2
MIRT567455 GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein 2 2
MIRT575143 Cd93 CD93 antigen 2 2
MIRT607217 ACSM2A acyl-CoA synthetase medium chain family member 2A 2 4
MIRT607286 CD300E CD300e molecule 2 6
MIRT607302 RREB1 ras responsive element binding protein 1 2 6
MIRT608645 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT611095 MYO1F myosin IF 2 4
MIRT611576 CLEC4D C-type lectin domain family 4 member D 2 2
MIRT614271 WSCD2 WSC domain containing 2 2 2
MIRT614855 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT617114 KANK2 KN motif and ankyrin repeat domains 2 2 2
MIRT618002 SLC9A3R2 SLC9A3 regulator 2 2 2
MIRT618028 CTU1 cytosolic thiouridylase subunit 1 2 2
MIRT619062 BSND barttin CLCNK type accessory beta subunit 2 4
MIRT619289 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619356 CFHR5 complement factor H related 5 2 2
MIRT620725 CCL16 C-C motif chemokine ligand 16 2 2
MIRT620913 LRRTM2 leucine rich repeat transmembrane neuronal 2 2 2
MIRT621902 TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 2 2
MIRT622025 STAT5A signal transducer and activator of transcription 5A 2 2
MIRT622556 PTPN3 protein tyrosine phosphatase, non-receptor type 3 2 2
MIRT623137 NCKAP1 NCK associated protein 1 2 2
MIRT623140 NAV2 neuron navigator 2 2 2
MIRT623701 HHAT hedgehog acyltransferase 2 2
MIRT624602 B3GALT5 beta-1,3-galactosyltransferase 5 2 2
MIRT625944 OLIG3 oligodendrocyte transcription factor 3 2 2
MIRT625988 SPATA17 spermatogenesis associated 17 2 2
MIRT628028 LSAMP limbic system-associated membrane protein 2 2
MIRT635521 MC2R melanocortin 2 receptor 2 2
MIRT638916 CALCOCO2 calcium binding and coiled-coil domain 2 2 2
MIRT639796 EPX eosinophil peroxidase 2 2
MIRT640344 C1orf210 chromosome 1 open reading frame 210 2 2
MIRT644806 VLDLR very low density lipoprotein receptor 2 2
MIRT645303 AGTRAP angiotensin II receptor associated protein 2 2
MIRT645629 SYTL4 synaptotagmin like 4 2 2
MIRT645683 TBC1D13 TBC1 domain family member 13 2 2
MIRT646216 DUSP10 dual specificity phosphatase 10 2 2
MIRT648505 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT649748 UTP20 UTP20, small subunit processome component 2 2
MIRT649797 CLEC2D C-type lectin domain family 2 member D 2 2
MIRT650482 UFM1 ubiquitin fold modifier 1 2 2
MIRT653199 SP9 Sp9 transcription factor 2 2
MIRT655741 NR2F2 nuclear receptor subfamily 2 group F member 2 2 2
MIRT659978 C2CD2L C2CD2 like 2 2
MIRT660350 BAG4 BCL2 associated athanogene 4 2 2
MIRT662185 MEI1 meiotic double-stranded break formation protein 1 2 2
MIRT663290 TECPR2 tectonin beta-propeller repeat containing 2 2 2
MIRT666817 PRCP prolylcarboxypeptidase 2 2
MIRT671665 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT671838 PDE3A phosphodiesterase 3A 2 2
MIRT672193 F2 coagulation factor II, thrombin 2 2
MIRT673870 KLF2 Kruppel like factor 2 2 2
MIRT683563 CARD8 caspase recruitment domain family member 8 2 2
MIRT684545 ZNF708 zinc finger protein 708 2 2
MIRT685140 TACR3 tachykinin receptor 3 2 2
MIRT685413 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT686039 SLC5A5 solute carrier family 5 member 5 2 2
MIRT686126 B4GALT7 beta-1,4-galactosyltransferase 7 2 2
MIRT687473 NHLRC2 NHL repeat containing 2 2 2
MIRT687946 HHIP hedgehog interacting protein 2 2
MIRT688171 FRRS1 ferric chelate reductase 1 2 2
MIRT688295 FAM208A family with sequence similarity 208 member A 2 2
MIRT689044 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT689194 ZNF574 zinc finger protein 574 2 2
MIRT691253 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT695358 PHAX phosphorylated adaptor for RNA export 2 2
MIRT696674 APOC3 apolipoprotein C3 2 2
MIRT697358 ZNF394 zinc finger protein 394 2 2
MIRT697604 XIAP X-linked inhibitor of apoptosis 2 2
MIRT697726 USP6NL USP6 N-terminal like 2 2
MIRT697776 UBXN7 UBX domain protein 7 2 2
MIRT698478 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT698984 SPAG9 sperm associated antigen 9 2 2
MIRT699851 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT700172 RIMKLB ribosomal modification protein rimK like family member B 2 2
MIRT704339 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT704589 CLN8 CLN8, transmembrane ER and ERGIC protein 2 2
MIRT705836 AHCY adenosylhomocysteinase 2 2
MIRT707085 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT707132 TRA2B transformer 2 beta homolog 2 2
MIRT707145 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT707234 H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase 2 2
MIRT707347 XPNPEP3 X-prolyl aminopeptidase 3 2 2
MIRT707445 PPFIBP1 PPFIA binding protein 1 2 2
MIRT707494 AXL AXL receptor tyrosine kinase 2 2
MIRT707638 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT707690 FAM118A family with sequence similarity 118 member A 2 2
MIRT707706 CDC6 cell division cycle 6 2 2
MIRT707817 TMEM170A transmembrane protein 170A 2 2
MIRT707957 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT707996 NUDT4 nudix hydrolase 4 2 2
MIRT708026 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT708058 LIX1L limb and CNS expressed 1 like 2 2
MIRT708089 KIAA1671 KIAA1671 2 2
MIRT708125 GK5 glycerol kinase 5 (putative) 2 2
MIRT708194 ANP32E acidic nuclear phosphoprotein 32 family member E 2 2
MIRT708201 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT710503 BSDC1 BSD domain containing 1 2 2
MIRT711308 IFNGR2 interferon gamma receptor 2 2 2
MIRT711740 DTX1 deltex E3 ubiquitin ligase 1 2 2
MIRT713202 SOCS6 suppressor of cytokine signaling 6 2 2
MIRT714380 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT715210 NPVF neuropeptide VF precursor 2 2
MIRT715559 EPHB4 EPH receptor B4 2 2
MIRT715835 SZT2 SZT2, KICSTOR complex subunit 2 2
MIRT716680 HLA-B major histocompatibility complex, class I, B 2 2
MIRT717660 THBS2 thrombospondin 2 2 2
MIRT718132 PALM paralemmin 2 2
MIRT718322 METTL7A methyltransferase like 7A 2 2
MIRT720693 RNF217 ring finger protein 217 2 2
MIRT720727 ELOVL7 ELOVL fatty acid elongase 7 2 2
MIRT721376 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721983 FAM214B family with sequence similarity 214 member B 2 2
MIRT722163 MRPS15 mitochondrial ribosomal protein S15 2 2
MIRT722881 MOB3A MOB kinase activator 3A 2 2
MIRT723218 FMNL3 formin like 3 2 2
MIRT723788 MUC17 mucin 17, cell surface associated 2 2
MIRT724093 TMEM199 transmembrane protein 199 2 2
MIRT725265 OSTM1 osteopetrosis associated transmembrane protein 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6818-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-6818-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-6818-3p Cisplatin 5460033 NSC119875 approved resistant cell line (MGC-803)

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