miRTarBase - #MIRT542559


—
pre-miRNA Information
pre-miRNA hsa-mir-6818   
Genomic Coordinates chr22: 30007049 - 30007113
Description Homo sapiens miR-6818 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6818-3p
Sequence 44| UUGUCUCUUGUUCCUCACACAG |65
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1325627700 2 dbSNP
rs750902684 3 dbSNP
rs756542190 6 dbSNP
rs1365035732 17 dbSNP
Putative Targets

Gene Information
Gene Symbol ZNF280B   
Synonyms 5'OY11.1, D87009.C22.3, SUHW2, ZNF279, ZNF632
Description zinc finger protein 280B
Transcript NM_080764   
Expression
Putative miRNA Targets on ZNF280B
3'UTR of ZNF280B
(miRNA target sites are highlighted)		 
>ZNF280B|NM_080764|3'UTR
   1 TTCTAGTTTCAGTAAATCTAAAGCAAGTATTTCAAACCAAATTAAAAAACCTCATAAAACAAAAAATACAAACCATACAT
  81 TATTCAGTAGCACCAAAAATAGTGAAACTAGTGGATTATATATGACTTTTTAAACAAGATTCAGGATATATATTATTTGA
 161 TCTGAATTTTGAGGTATTATTTTAAAACATCTGGTTTTCATGTTAACTGTATCTGGCTTAACACATAAAAGGTGTTTGTG
 241 TGTGTGTGTGAGAGAGAGAAAAAGGTATTAATTTATTTTTTTAATTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTA
 321 CTTTAGAGACAGGGTCTCACTGTTACCCAGGCTGGAGTGCAGTGGCGTGATCCTAGCTCACTGCAACCTTGAACTTCCAG
 401 GCTCAAGCATTCCTCCGCCTCAGCCTTTGGAGAGTAGCTAGGACTACAGGCGCAGCCACCACACCCAGCTAATTTTTTAT
 481 TTTAATTTTTTGTAGCGATGGAATCTTGTTATGTCGCCCAGGGTGGTCTCGAACTCCTGACCTTAGGGGAGCCTCCTGCC
 561 TCAGCCTCCCCAAGTGCTGGGTTGTGTGAGTCACTGCCCCTGGCACCTATTTATTGTTTTGGTATTTCATGTTACTCCTA
 641 AGCTTGAAAGCTCTTTTTTCTATATACAGAATTCATAGAATTTTTGAAATACTTAGTTTTCTTTACAGCTTTTTCCATGC
 721 ATTCAGCATTTCATGGTTAACTCTAGTCAGACTGGAATGGCTTTGTTATGCCCTGGCCCACTTGCTGCCGAATTCCCAGA
 801 AGTGCCTCTGCTGTGCTGGCATAAAATAACCTGAAAAGATTCTGAAAAGCCAGGATGTGGAATTGAAAGAGAAGCTGCTG
 881 CGTGAGCAGAGACCAAGAAGGCGGAGGTTAGTTGAGGGAGAGCAGTGGTTCTTTGTTCTAGTTGAAGTATAGGCACACAT
 961 TCATTCTAGTCTTGGGGCCAGGTCAAAAGGAACACTGCTTCAGAGTGTCTTTACCTACCTGAAAACATCCAAGGAAGCCA
1041 AACCATTCAAAGTAAAATGCTTTTGTTTGGTGAAGGGCCCCTGCAGACATCAAACAGCCGTCATGTATCATTGGTTTGAG
1121 GTGAAATAGCAATAAAATTAATAGAATGGTGCCTGGTACTAGCTGACTTCCTGTTCTGTGATCTAAAGGTGAATTTGATT
1201 CATTCCCTCTCCTCTCCCTTCTGGCTAGCCGTTAGTGGAGAATGAACTGGCCATATTCTCAGCCACAGCTGTAAAGCAAG
1281 TTTCCCAAGGGGAAGAAGCCCTAATATCTATAATTTGAACTGTACTGGACCCATAGTTTTAACTGAAAAGGGCCAAACAA
1361 GTGGTGTCTGTCCAGTTCCTGGACTGGGCTAAATTTAGTTTTCCCACTGTTAAGCTGGAATGAGGACTGTCCCAACAACA
1441 GTAGGTACAGTGGACAAAAATAGCCCAGGGTGACTGACTGAATTTAAACCCATAATGGCTTTATATTTTTCTGTGCATAT
1521 ATATCTTACCCTAATTGAACATGTGAAGCTTGCAACTTTATGTCTTGCTTTGGACATGAATGTATTACAGCTTGCAGCTA
1601 TTCTGTTAAATGTATAGTTTCCCAGTTTTTTGACACTAATGCTGTTTGGGTCTTACCTGACACACACCAGTGTGCAAGAA
1681 ATGTCTCTCTAATTCAATAAGTTTTAAGACTTAGAGTTAATGTCCTTCATCTGATCTATCCTATCTAATCTGTACTATGG
1761 GTGAATCTTTTTCCCTTGCTCTCCCCAGGGGCTGTTTCACAGTATTCTGGAGTACCTTTTGAGTATTGGTTCCTGAACAT
1841 CAGCAGTCTTGGCTGCCTCTGTGGACTCCCGGAGTTGTCTCCCTGCTTGTGTTCTGGTGCCATCCTTTGTTCCTCCACCC
1921 CTGACCAAGGTGCCCAGCAGCCTGTCTTCACCAGTCAAGGAATCCGCCATCTTGGCTGTAGACATACATAGGTCTGGAGA
2001 AATCTCTCCCTTTTTCCTTGATTTCTTTTTAAAGGTACCTTATCTCTCCCCACTCCTTTCTTCCCTCCTCAATCTAGTTA
2081 AATTTCCTAAGCTTTCACAAAAATCCGGGAAGAGATAATTAAGAGCTTAGCATCCCTCTTAGAGTAGAAGGCAGTACAGA
2161 TAACAAAGAAGTTGTGAGTATATTATCTACATTTTAGAAAATTTTCTGACTCTAGATCCATAGATTCTGTTGTATTTATT
2241 TGCCGGACACTCATTTGATTGATTTGCACCTTGAACACTATACTAGGTCTTTTCAGTTACGTTGCTTGGGTTAAGACACT
2321 TTGCTAAAATTACAGCCTGAATCCTTTCTTTAGTTGAAGAAAGGGTATGTGTGTGCAAGTGGGTGTGTGTGTGCCAGTTT
2401 TTCTTGTCTCAGGTAGATACTCCCACTGTGTATAAATAGATCTACAGACTTTTCATACTTACCTCCCGTATTCTGTTTCT
2481 GTGGTAAAAATATGAAGTGTTTTAGTTGTATGTTGAGTGATTGGTTGGTATTATCAACACTGTTGTTTGCAGTCTCATTA
2561 AAGCATGCTCTTAAGGAGTACATATGGTCATTAATTGCCAACTGTAGATTCCAGTGATCTGGCCCCTGCCTACCTCCTTC
2641 CTCTCTTTTTCATTCTCTGTCATGCTTCTCCACTGTTTTCCCCAATGATGCACTATTTTGACACACTGGCCTTGCTATTC
2721 CTTAAGCAAATCACATTCTTCCCAATCCAAAGACTTTGCACATGCTGTTGTCTTTCTTAGAATGCCCTTCCCCTAGGCCT
2801 GCATGGCTTGCTACCTCACTTAATTGTTTGACACTTCCTTTGGTTCATTGAGCTTCAAGGCTCTTAAAATGCCACTGACA
2881 ATGAGATCTCCCTTTAAAAAAAAAAAAAAACTTCTACTTTTCCTCTTAAAGGCACTTTACTCTCTCCCCACTCTTTTCTT
2961 CCTCTTCAAAGTATTTAAATTTCCTAGGTTTTCATGAAAAAGCTGGAAAGCGATCATCATCAAGGGCTTTGCTTCTGTCT
3041 TAGAATTGAGCTAGCTTGAGTCAATTTCTGTGCCTGCAACCAAATGAAAATTAATATAGTGAGTTCTTTCAGGAGCTTTC
3121 TCTGTTTTTCTATTGATACCTCTATATATTTTTAAGGCAATGTCACTTTGTTTTGTTTACAAATATATTGAATATGTCAA
3201 GATTACTATTTTGTTATTGCCCTTTGTGAATTTCCTTGTCTATTTTGCTCGCTTGTTCTTTCAGGTGAAATTTATTATTT
3281 TATTAATGTTGCCAAAAATTATAAGTAAAATATCAATTATAGTAATAAAATGTTTTGTGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gacacacuccuuguUCUCUGUu 5'
                        ||||||| 
Target 5' tttttttttactttAGAGACAg 3'
 311 - 332 140.00 -9.40
2 
miRNA  3' gaCACACUC-CUUGUUCUCUGUu 5'
            ||||| | ||: :||||| | 
Target 5' gtGTGTGTGTGAGAGAGAGAAAa 3'
 240 - 262 136.00 -17.22
3 
miRNA  3' gacAC-ACUC-CUUGUUCUCUGuu 5'
             || || | ||:| ||||||  
Target 5' agcTGCTGCGTGAGC-AGAGACca 3'
 873 - 895 134.00 -16.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30533285 2 COSMIC
COSN31512515 22 COSMIC
COSN31602164 23 COSMIC
COSN31480895 33 COSMIC
COSN31548144 41 COSMIC
COSN30151967 44 COSMIC
COSN30516642 52 COSMIC
COSN30144777 55 COSMIC
COSN31520640 67 COSMIC
COSN30192418 68 COSMIC
COSN31502089 81 COSMIC
COSN13904571 120 COSMIC
COSN28839586 151 COSMIC
COSN31610276 249 COSMIC
COSN15189718 321 COSMIC
COSN8014477 485 COSMIC
COSN25442016 897 COSMIC
COSN25373474 998 COSMIC
COSN1895386 1271 COSMIC
COSN26144768 1286 COSMIC
COSN5989317 1682 COSMIC
COSN20117208 1696 COSMIC
COSN8014476 2287 COSMIC
COSN21060723 2343 COSMIC
COSN10028388 2575 COSMIC
COSN16304132 2628 COSMIC
COSN30173955 2732 COSMIC
COSN195221 2754 COSMIC
COSN10028387 2797 COSMIC
COSN27201228 2895 COSMIC
COSN31517868 2895 COSMIC
COSN1895385 3014 COSMIC
COSN31543932 3115 COSMIC
COSN31529174 3152 COSMIC
COSN24307401 3171 COSMIC
COSN31597368 3211 COSMIC
COSN25183900 3250 COSMIC
COSN31546085 3326 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs756557936 3 dbSNP
rs777491859 6 dbSNP
rs1263836843 19 dbSNP
rs1392500852 24 dbSNP
rs757976549 27 dbSNP
rs747685320 29 dbSNP
rs778341916 37 dbSNP
rs755527914 39 dbSNP
rs754310879 41 dbSNP
rs766720072 44 dbSNP
rs1227165934 49 dbSNP
rs1341621076 50 dbSNP
rs745425295 50 dbSNP
rs1030778275 53 dbSNP
rs1319446256 57 dbSNP
rs571445336 65 dbSNP
rs1383377941 69 dbSNP
rs1309988756 74 dbSNP
rs1321584868 77 dbSNP
rs997594499 81 dbSNP
rs117413130 85 dbSNP
rs1327493938 87 dbSNP
rs1208535924 89 dbSNP
rs1242875730 93 dbSNP
rs1018099501 94 dbSNP
rs1486985006 110 dbSNP
rs1180129955 118 dbSNP
rs534998466 120 dbSNP
rs372498479 126 dbSNP
rs1165549062 132 dbSNP
rs16988995 135 dbSNP
rs953136029 137 dbSNP
rs1030008616 138 dbSNP
rs1276219352 160 dbSNP
rs1345370688 174 dbSNP
rs1233606311 177 dbSNP
rs1375504583 181 dbSNP
rs1455038417 182 dbSNP
rs1300502743 184 dbSNP
rs1377787674 194 dbSNP
rs1048318222 200 dbSNP
rs1295614341 202 dbSNP
rs1448363340 203 dbSNP
rs1400897121 205 dbSNP
rs993764809 206 dbSNP
rs142952163 211 dbSNP
rs1285408891 215 dbSNP
rs570087256 221 dbSNP
rs1318888501 226 dbSNP
rs1021075137 228 dbSNP
rs1255689458 232 dbSNP
rs1404129334 244 dbSNP
rs1174528274 245 dbSNP
rs1478510669 247 dbSNP
rs1486028388 248 dbSNP
rs376040494 249 dbSNP
rs1176358434 251 dbSNP
rs1259478486 251 dbSNP
rs1408450843 251 dbSNP
rs1471584165 251 dbSNP
rs5758478 251 dbSNP
rs1173488022 253 dbSNP
rs1393217304 253 dbSNP
rs893984101 253 dbSNP
rs1441657282 256 dbSNP
rs201070886 258 dbSNP
rs397948913 259 dbSNP
rs1491057526 260 dbSNP
rs201764479 260 dbSNP
rs949159001 260 dbSNP
rs1314198813 262 dbSNP
rs1369186127 264 dbSNP
rs386394999 264 dbSNP
rs1201404696 267 dbSNP
rs1280710771 269 dbSNP
rs1352443666 270 dbSNP
rs1283483082 271 dbSNP
rs1375969900 273 dbSNP
rs1217887591 274 dbSNP
rs368508337 275 dbSNP
rs1348909937 276 dbSNP
rs1054406921 283 dbSNP
rs1213056619 283 dbSNP
rs878888089 283 dbSNP
rs144628030 284 dbSNP
rs1283489867 285 dbSNP
rs1445813853 288 dbSNP
rs1481995775 288 dbSNP
rs57921691 289 dbSNP
rs6002491 290 dbSNP
rs377396490 291 dbSNP
rs1233433480 292 dbSNP
rs1471020119 302 dbSNP
rs1189278522 319 dbSNP
rs1174902464 320 dbSNP
rs1195096685 320 dbSNP
rs1236781097 320 dbSNP
rs1293333294 320 dbSNP
rs1295765023 320 dbSNP
rs1330119719 320 dbSNP
rs1341534077 320 dbSNP
rs1356834886 320 dbSNP
rs1366904156 320 dbSNP
rs1371931523 320 dbSNP
rs1387777361 320 dbSNP
rs1394046224 320 dbSNP
rs1408921366 320 dbSNP
rs1434714356 320 dbSNP
rs1454457263 320 dbSNP
rs71199481 320 dbSNP
rs1168024451 321 dbSNP
rs1474778273 321 dbSNP
rs5996066 326 dbSNP
rs6002490 328 dbSNP
rs1312252031 331 dbSNP
rs938290249 333 dbSNP
rs183541449 340 dbSNP
rs1157104587 341 dbSNP
rs1443647965 342 dbSNP
rs1421567965 349 dbSNP
rs1046417955 352 dbSNP
rs1364770492 360 dbSNP
rs916348551 367 dbSNP
rs1431503751 373 dbSNP
rs117713049 386 dbSNP
rs1163175162 406 dbSNP
rs919376746 413 dbSNP
rs972152342 416 dbSNP
rs1055264101 417 dbSNP
rs941806032 421 dbSNP
rs1245778503 428 dbSNP
rs936824152 434 dbSNP
rs1193202933 441 dbSNP
rs1243354168 443 dbSNP
rs1471564878 450 dbSNP
rs192858138 451 dbSNP
rs1363698744 452 dbSNP
rs1463303873 456 dbSNP
rs1260565472 457 dbSNP
rs1384452277 462 dbSNP
rs1401508259 466 dbSNP
rs1218392812 469 dbSNP
rs374695614 471 dbSNP
rs5758477 472 dbSNP
rs1338762840 483 dbSNP
rs559296995 485 dbSNP
rs1414296249 486 dbSNP
rs1292565771 490 dbSNP
rs1030390507 495 dbSNP
rs187669662 496 dbSNP
rs79115173 497 dbSNP
rs1349427600 511 dbSNP
rs1205353065 514 dbSNP
rs755690593 515 dbSNP
rs6002486 516 dbSNP
rs925497714 523 dbSNP
rs1209564731 530 dbSNP
rs1258767586 531 dbSNP
rs1476479787 546 dbSNP
rs1180381029 549 dbSNP
rs1399111206 556 dbSNP
rs1363577753 559 dbSNP
rs1470749067 562 dbSNP
rs115050789 568 dbSNP
rs966977427 569 dbSNP
rs12484595 577 dbSNP
rs923297120 581 dbSNP
rs893948056 588 dbSNP
rs976522915 591 dbSNP
rs1434143291 598 dbSNP
rs1032539949 600 dbSNP
rs1375931762 609 dbSNP
rs1416550884 616 dbSNP
rs750050407 619 dbSNP
rs879219026 620 dbSNP
rs1002852383 623 dbSNP
rs778019626 627 dbSNP
rs1209452609 628 dbSNP
rs1280422704 631 dbSNP
rs1486404279 636 dbSNP
rs949333074 640 dbSNP
rs1250500013 642 dbSNP
rs376835988 647 dbSNP
rs1006656847 652 dbSNP
rs1184465381 656 dbSNP
rs758733312 660 dbSNP
rs1164092052 662 dbSNP
rs1026803268 675 dbSNP
rs5996065 678 dbSNP
rs1174269638 689 dbSNP
rs867540250 695 dbSNP
rs1396967100 700 dbSNP
rs1403709597 704 dbSNP
rs1296365338 728 dbSNP
rs1395741178 732 dbSNP
rs994026637 733 dbSNP
rs1166355580 757 dbSNP
rs1330648960 761 dbSNP
rs897117104 769 dbSNP
rs1036426804 770 dbSNP
rs942103913 775 dbSNP
rs753208148 778 dbSNP
rs1340712413 779 dbSNP
rs10439910 780 dbSNP
rs894853941 781 dbSNP
rs1488378732 782 dbSNP
rs1029103168 789 dbSNP
rs923246491 790 dbSNP
rs1452854361 796 dbSNP
rs1169870507 798 dbSNP
rs975978641 801 dbSNP
rs1462435606 802 dbSNP
rs1169643107 803 dbSNP
rs1391994170 805 dbSNP
rs759670629 809 dbSNP
rs543132314 813 dbSNP
rs1315822474 819 dbSNP
rs1372762808 821 dbSNP
rs1379978825 823 dbSNP
rs1279795570 826 dbSNP
rs904005808 827 dbSNP
rs1308528752 838 dbSNP
rs1042620769 842 dbSNP
rs1230256824 845 dbSNP
rs577778386 846 dbSNP
rs989845927 864 dbSNP
rs557935710 870 dbSNP
rs1293186551 874 dbSNP
rs569333948 878 dbSNP
rs1214756227 879 dbSNP
rs1275243090 881 dbSNP
rs1434374809 882 dbSNP
rs1485021569 887 dbSNP
rs976070449 893 dbSNP
rs1032922859 894 dbSNP
rs943383269 902 dbSNP
rs73878488 903 dbSNP
rs1460691721 906 dbSNP
rs969969923 911 dbSNP
rs984826879 922 dbSNP
rs1396148470 928 dbSNP
rs1451182270 935 dbSNP
rs1287993813 947 dbSNP
rs5758473 948 dbSNP
rs1383468943 949 dbSNP
rs1026773152 954 dbSNP
rs897798457 958 dbSNP
rs1234236215 959 dbSNP
rs555718446 963 dbSNP
rs961283214 965 dbSNP
rs116654620 969 dbSNP
rs1013226482 977 dbSNP
rs1006289872 988 dbSNP
rs1215310624 992 dbSNP
rs894792474 997 dbSNP
rs1189146420 1000 dbSNP
rs1478707598 1002 dbSNP
rs5758470 1007 dbSNP
rs1255258827 1013 dbSNP
rs183336685 1024 dbSNP
rs1197474096 1025 dbSNP
rs1050676960 1027 dbSNP
rs1188311089 1030 dbSNP
rs771764570 1042 dbSNP
rs1456333198 1043 dbSNP
rs1259950585 1044 dbSNP
rs931798344 1052 dbSNP
rs1198986382 1059 dbSNP
rs6002485 1060 dbSNP
rs571419942 1064 dbSNP
rs945995914 1065 dbSNP
rs1042546578 1069 dbSNP
rs912880882 1074 dbSNP
rs1375299430 1075 dbSNP
rs945531045 1091 dbSNP
rs191068928 1098 dbSNP
rs528376014 1100 dbSNP
rs559419480 1109 dbSNP
rs943662321 1114 dbSNP
rs1304184889 1120 dbSNP
rs1318977995 1125 dbSNP
rs1232104049 1130 dbSNP
rs548938830 1132 dbSNP
rs1279710360 1138 dbSNP
rs910524378 1142 dbSNP
rs185116616 1149 dbSNP
rs930721547 1151 dbSNP
rs1479519543 1153 dbSNP
rs1176441370 1160 dbSNP
rs1408205391 1161 dbSNP
rs1441180775 1162 dbSNP
rs1171433630 1181 dbSNP
rs1393936986 1182 dbSNP
rs980263740 1185 dbSNP
rs563308328 1193 dbSNP
rs1441870950 1201 dbSNP
rs1299112915 1208 dbSNP
rs1333981531 1209 dbSNP
rs1438979878 1211 dbSNP
rs1025163390 1212 dbSNP
rs1348658701 1214 dbSNP
rs1280604286 1217 dbSNP
rs972499648 1230 dbSNP
rs1203491798 1231 dbSNP
rs543069008 1241 dbSNP
rs182648890 1242 dbSNP
rs1024862185 1250 dbSNP
rs1173514012 1253 dbSNP
rs1458966999 1258 dbSNP
rs992468130 1262 dbSNP
rs1191331842 1266 dbSNP
rs1014928784 1267 dbSNP
rs1454300429 1268 dbSNP
rs1415763610 1294 dbSNP
rs959359109 1295 dbSNP
rs887781287 1299 dbSNP
rs1409901880 1301 dbSNP
rs1050493527 1305 dbSNP
rs1033339869 1307 dbSNP
rs1439227014 1308 dbSNP
rs996682465 1310 dbSNP
rs901647874 1311 dbSNP
rs1443136229 1342 dbSNP
rs1268508993 1352 dbSNP
rs564332081 1360 dbSNP
rs1359702802 1366 dbSNP
rs1213903311 1370 dbSNP
rs1177424385 1372 dbSNP
rs1437301378 1373 dbSNP
rs1040208395 1374 dbSNP
rs945964695 1387 dbSNP
rs1177748196 1392 dbSNP
rs1272091276 1398 dbSNP
rs1482800727 1407 dbSNP
rs1000543791 1408 dbSNP
rs1187594167 1409 dbSNP
rs1211996709 1409 dbSNP
rs967751578 1417 dbSNP
rs1281351136 1430 dbSNP
rs748847934 1433 dbSNP
rs74765820 1434 dbSNP
rs1407303500 1443 dbSNP
rs745522424 1448 dbSNP
rs1374831180 1450 dbSNP
rs1344660260 1451 dbSNP
rs115512092 1469 dbSNP
rs1392549410 1481 dbSNP
rs1378885707 1482 dbSNP
rs901996827 1483 dbSNP
rs1040569970 1491 dbSNP
rs918070012 1492 dbSNP
rs1211250673 1496 dbSNP
rs992364939 1503 dbSNP
rs1445889531 1508 dbSNP
rs1215928945 1512 dbSNP
rs1265917109 1513 dbSNP
rs542525323 1517 dbSNP
rs1474522179 1519 dbSNP
rs1008222568 1523 dbSNP
rs1419007026 1530 dbSNP
rs1157725669 1531 dbSNP
rs1417283688 1536 dbSNP
rs371239001 1540 dbSNP
rs1474003837 1543 dbSNP
rs889399881 1544 dbSNP
rs1384557666 1561 dbSNP
rs1401319815 1562 dbSNP
rs1159723721 1564 dbSNP
rs1049015785 1574 dbSNP
rs1300123252 1575 dbSNP
rs780832219 1576 dbSNP
rs1412843745 1578 dbSNP
rs1312270547 1582 dbSNP
rs919317882 1586 dbSNP
rs1246781012 1588 dbSNP
rs879339138 1595 dbSNP
rs1349541507 1600 dbSNP
rs1223788258 1616 dbSNP
rs950187626 1617 dbSNP
rs952056140 1618 dbSNP
rs1258463217 1619 dbSNP
rs1029421474 1620 dbSNP
rs1210764009 1625 dbSNP
rs917742346 1626 dbSNP
rs1351595668 1628 dbSNP
rs1444444265 1632 dbSNP
rs758756458 1634 dbSNP
rs576317982 1635 dbSNP
rs1262627199 1636 dbSNP
rs901975840 1640 dbSNP
rs892055207 1642 dbSNP
rs1393343260 1643 dbSNP
rs1434227535 1649 dbSNP
rs1172910861 1654 dbSNP
rs1018726356 1656 dbSNP
rs992041725 1661 dbSNP
rs959520079 1667 dbSNP
rs1009991786 1668 dbSNP
rs891635114 1668 dbSNP
rs926530121 1672 dbSNP
rs979069490 1676 dbSNP
rs796828782 1678 dbSNP
rs561567640 1683 dbSNP
rs556600063 1697 dbSNP
rs1250243721 1698 dbSNP
rs759843283 1700 dbSNP
rs1180711086 1705 dbSNP
rs1009711825 1713 dbSNP
rs539935562 1725 dbSNP
rs1453818827 1726 dbSNP
rs1194372629 1731 dbSNP
rs1356545080 1738 dbSNP
rs753048350 1743 dbSNP
rs965859857 1746 dbSNP
rs1166144169 1761 dbSNP
rs1395496268 1767 dbSNP
rs1297192720 1772 dbSNP
rs1465995015 1779 dbSNP
rs1332903054 1780 dbSNP
rs1397810481 1799 dbSNP
rs1019522555 1802 dbSNP
rs1044475918 1818 dbSNP
rs1368374973 1824 dbSNP
rs1439437868 1828 dbSNP
rs9306362 1829 dbSNP
rs557967370 1830 dbSNP
rs1049317715 1832 dbSNP
rs972483746 1838 dbSNP
rs1251283150 1843 dbSNP
rs940797969 1847 dbSNP
rs994765864 1851 dbSNP
rs1457000510 1853 dbSNP
rs897815976 1870 dbSNP
rs531599551 1871 dbSNP
rs35209123 1873 dbSNP
rs1366598185 1879 dbSNP
rs1036405360 1894 dbSNP
rs1475396472 1900 dbSNP
rs377048317 1909 dbSNP
rs1193202449 1911 dbSNP
rs541578155 1915 dbSNP
rs1190893315 1917 dbSNP
rs1372459153 1918 dbSNP
rs1478005399 1922 dbSNP
rs1172565164 1923 dbSNP
rs1391759832 1923 dbSNP
rs1264161648 1931 dbSNP
rs1460583047 1934 dbSNP
rs377714398 1935 dbSNP
rs1056661104 1937 dbSNP
rs1392222672 1942 dbSNP
rs1488224843 1944 dbSNP
rs937880645 1945 dbSNP
rs1341713957 1949 dbSNP
rs1220772192 1956 dbSNP
rs529194119 1958 dbSNP
rs926500648 1959 dbSNP
rs1235746000 1965 dbSNP
rs1335890384 1966 dbSNP
rs1277895625 1975 dbSNP
rs201726143 1978 dbSNP
rs200545239 1979 dbSNP
rs979332801 1980 dbSNP
rs199826317 1981 dbSNP
rs386394998 1985 dbSNP
rs3083384 1986 dbSNP
rs967982682 1986 dbSNP
rs1262305115 1987 dbSNP
rs1488585635 1988 dbSNP
rs1195833815 1991 dbSNP
rs397755394 1991 dbSNP
rs1295883061 1992 dbSNP
rs1415389819 2002 dbSNP
rs913565869 2004 dbSNP
rs569309657 2006 dbSNP
rs966025516 2007 dbSNP
rs1165011753 2009 dbSNP
rs1388002593 2010 dbSNP
rs1369860115 2016 dbSNP
rs1295216789 2017 dbSNP
rs36195795 2018 dbSNP
rs1461950952 2019 dbSNP
rs1399474589 2020 dbSNP
rs1168221506 2021 dbSNP
rs1478692691 2025 dbSNP
rs1450946097 2034 dbSNP
rs1010296348 2042 dbSNP
rs1402380383 2050 dbSNP
rs766394881 2055 dbSNP
rs966149943 2057 dbSNP
rs891604114 2060 dbSNP
rs1315064904 2061 dbSNP
rs1315360111 2070 dbSNP
rs1238349698 2073 dbSNP
rs1286812384 2074 dbSNP
rs1489351052 2097 dbSNP
rs75324277 2100 dbSNP
rs532850699 2106 dbSNP
rs953560063 2107 dbSNP
rs1257752608 2116 dbSNP
rs949664651 2118 dbSNP
rs1157992078 2130 dbSNP
rs1380369496 2131 dbSNP
rs563868299 2141 dbSNP
rs1469246294 2144 dbSNP
rs1421027027 2145 dbSNP
rs895485442 2157 dbSNP
rs1027806804 2159 dbSNP
rs1258019270 2161 dbSNP
rs1036758826 2163 dbSNP
rs1197091935 2168 dbSNP
rs1310318944 2171 dbSNP
rs1341973565 2180 dbSNP
rs995049177 2183 dbSNP
rs898118045 2197 dbSNP
rs939765289 2200 dbSNP
rs1278050159 2202 dbSNP
rs1311538148 2203 dbSNP
rs1015306148 2205 dbSNP
rs1257525836 2206 dbSNP
rs1479572667 2214 dbSNP
rs1014259758 2219 dbSNP
rs895867927 2220 dbSNP
rs1238455436 2221 dbSNP
rs563483259 2226 dbSNP
rs1049733631 2234 dbSNP
rs1036324461 2244 dbSNP
rs1425016205 2245 dbSNP
rs1415536017 2246 dbSNP
rs1178957045 2251 dbSNP
rs1353089359 2262 dbSNP
rs1328835311 2265 dbSNP
rs1332240330 2269 dbSNP
rs1304918502 2270 dbSNP
rs1379435590 2278 dbSNP
rs1302784517 2280 dbSNP
rs1368468910 2289 dbSNP
rs930902166 2291 dbSNP
rs922144556 2293 dbSNP
rs975026245 2294 dbSNP
rs1197799252 2295 dbSNP
rs1441011895 2296 dbSNP
rs540748568 2300 dbSNP
rs1329285864 2305 dbSNP
rs937438835 2309 dbSNP
rs1458827056 2322 dbSNP
rs1211503458 2325 dbSNP
rs965995768 2336 dbSNP
rs117942036 2337 dbSNP
rs1043617974 2343 dbSNP
rs988845062 2349 dbSNP
rs1418020715 2352 dbSNP
rs1477677413 2352 dbSNP
rs1171835737 2357 dbSNP
rs771693691 2357 dbSNP
rs1402656608 2361 dbSNP
rs536536483 2362 dbSNP
rs543509735 2366 dbSNP
rs1350507221 2367 dbSNP
rs1376130696 2377 dbSNP
rs1438760773 2378 dbSNP
rs1032840133 2382 dbSNP
rs1195531897 2383 dbSNP
rs750676691 2384 dbSNP
rs1000469568 2390 dbSNP
rs1454783532 2391 dbSNP
rs113092504 2392 dbSNP
rs1023263275 2394 dbSNP
rs1319816387 2397 dbSNP
rs1014197112 2408 dbSNP
rs767761377 2411 dbSNP
rs1451630583 2415 dbSNP
rs191279543 2420 dbSNP
rs913825456 2426 dbSNP
rs186304504 2429 dbSNP
rs1439916941 2432 dbSNP
rs1490849250 2432 dbSNP
rs576719498 2442 dbSNP
rs1003013558 2447 dbSNP
rs895454383 2449 dbSNP
rs1195105650 2456 dbSNP
rs1426225153 2462 dbSNP
rs1474453420 2463 dbSNP
rs1162865256 2465 dbSNP
rs556585974 2467 dbSNP
rs761744835 2468 dbSNP
rs1316336027 2480 dbSNP
rs1360047349 2485 dbSNP
rs888227017 2489 dbSNP
rs1342118954 2491 dbSNP
rs1048151430 2502 dbSNP
rs1234356813 2510 dbSNP
rs1283197494 2512 dbSNP
rs930768018 2518 dbSNP
rs922143188 2523 dbSNP
rs1306983593 2524 dbSNP
rs1352426896 2534 dbSNP
rs1217949660 2536 dbSNP
rs1039234245 2537 dbSNP
rs1336289319 2541 dbSNP
rs1333180693 2548 dbSNP
rs408785 2554 dbSNP
rs1373820159 2560 dbSNP
rs985885357 2565 dbSNP
rs753464479 2572 dbSNP
rs953154157 2573 dbSNP
rs1157118792 2576 dbSNP
rs777558919 2578 dbSNP
rs1027772478 2582 dbSNP
rs1159128359 2585 dbSNP
rs181519240 2590 dbSNP
rs554277146 2602 dbSNP
rs1394003282 2607 dbSNP
rs973550835 2608 dbSNP
rs557854433 2617 dbSNP
rs1435387650 2623 dbSNP
rs925994480 2632 dbSNP
rs978870588 2636 dbSNP
rs1375490266 2637 dbSNP
rs962230927 2643 dbSNP
rs1240264865 2651 dbSNP
rs1288727381 2651 dbSNP
rs534312523 2662 dbSNP
rs1015194587 2663 dbSNP
rs1346345411 2677 dbSNP
rs970271784 2684 dbSNP
rs73156169 2685 dbSNP
rs1444538108 2688 dbSNP
rs398182 2689 dbSNP
rs1237826116 2693 dbSNP
rs775439404 2704 dbSNP
rs1259141060 2710 dbSNP
rs1211239088 2712 dbSNP
rs1034789600 2717 dbSNP
rs1015260753 2722 dbSNP
rs1283184770 2725 dbSNP
rs188935743 2727 dbSNP
rs1416008612 2738 dbSNP
rs904640845 2738 dbSNP
rs555997933 2743 dbSNP
rs34083779 2744 dbSNP
rs1375727419 2745 dbSNP
rs1446790987 2752 dbSNP
rs1224967875 2761 dbSNP
rs1310826705 2761 dbSNP
rs1276015821 2762 dbSNP
rs1347520985 2767 dbSNP
rs1043543387 2774 dbSNP
rs1257591371 2775 dbSNP
rs1458396462 2786 dbSNP
rs1200821828 2787 dbSNP
rs34087271 2790 dbSNP
rs569652306 2790 dbSNP
rs1048596249 2798 dbSNP
rs1378155792 2803 dbSNP
rs1478862347 2819 dbSNP
rs1168272984 2830 dbSNP
rs996623559 2832 dbSNP
rs1465816608 2833 dbSNP
rs900657182 2834 dbSNP
rs1387929962 2842 dbSNP
rs549344995 2846 dbSNP
rs1357181896 2847 dbSNP
rs532740745 2853 dbSNP
rs1039203542 2855 dbSNP
rs892351356 2865 dbSNP
rs1324738677 2872 dbSNP
rs944960097 2880 dbSNP
rs143783742 2881 dbSNP
rs1277949937 2885 dbSNP
rs867225406 2886 dbSNP
rs373660355 2888 dbSNP
rs186034287 2895 dbSNP
rs1210539475 2896 dbSNP
rs1488169755 2896 dbSNP
rs1053309752 2905 dbSNP
rs527383574 2906 dbSNP
rs925995441 2907 dbSNP
rs1052376195 2908 dbSNP
rs979227099 2909 dbSNP
rs578147183 2911 dbSNP
rs745604278 2911 dbSNP
rs948860873 2911 dbSNP
rs1298161444 2912 dbSNP
rs1398691865 2912 dbSNP
rs1015479986 2913 dbSNP
rs911542074 2918 dbSNP
rs985795464 2922 dbSNP
rs1402266265 2923 dbSNP
rs1163230065 2926 dbSNP
rs1321350197 2927 dbSNP
rs931699321 2932 dbSNP
rs1267286563 2935 dbSNP
rs548803625 2939 dbSNP
rs982712673 2941 dbSNP
rs1262419346 2944 dbSNP
rs1488473688 2949 dbSNP
rs1188054334 2950 dbSNP
rs1472010792 2956 dbSNP
rs952452550 2958 dbSNP
rs1165125709 2961 dbSNP
rs920348251 2961 dbSNP
rs973518387 2971 dbSNP
rs962251664 2975 dbSNP
rs1158521301 2994 dbSNP
rs908067039 3011 dbSNP
rs532025783 3015 dbSNP
rs414781 3017 dbSNP
rs960609261 3022 dbSNP
rs1378973457 3023 dbSNP
rs546539906 3039 dbSNP
rs1396820421 3047 dbSNP
rs1034345769 3051 dbSNP
rs1285140637 3060 dbSNP
rs1289027562 3070 dbSNP
rs1354342453 3086 dbSNP
rs1017716964 3089 dbSNP
rs1008988351 3097 dbSNP
rs1482829196 3100 dbSNP
rs1182060840 3106 dbSNP
rs1208063365 3110 dbSNP
rs1336662047 3116 dbSNP
rs1177470086 3119 dbSNP
rs1001542032 3122 dbSNP
rs577273361 3124 dbSNP
rs560492078 3132 dbSNP
rs1466898048 3139 dbSNP
rs540370615 3139 dbSNP
rs574920002 3140 dbSNP
rs1304772448 3142 dbSNP
rs1398389102 3144 dbSNP
rs1446054706 3146 dbSNP
rs1310064892 3148 dbSNP
rs1379299095 3152 dbSNP
rs1225366677 3154 dbSNP
rs1010714908 3156 dbSNP
rs1311343350 3163 dbSNP
rs892285224 3164 dbSNP
rs1268659897 3167 dbSNP
rs1432937584 3169 dbSNP
rs1456178253 3170 dbSNP
rs375001881 3181 dbSNP
rs915964421 3185 dbSNP
rs748556603 3186 dbSNP
rs181753682 3189 dbSNP
rs1189938870 3195 dbSNP
rs1425125719 3196 dbSNP
rs1434061620 3204 dbSNP
rs890378554 3210 dbSNP
rs1460283842 3216 dbSNP
rs938471668 3229 dbSNP
rs1422002552 3234 dbSNP
rs1465296403 3236 dbSNP
rs1397327155 3238 dbSNP
rs908387694 3240 dbSNP
rs371261155 3242 dbSNP
rs1291671902 3243 dbSNP
rs1366823149 3246 dbSNP
rs1477709728 3253 dbSNP
rs1284940474 3254 dbSNP
rs1416916911 3255 dbSNP
rs931668204 3262 dbSNP
rs920317007 3265 dbSNP
rs1439004770 3267 dbSNP
rs1037403476 3268 dbSNP
rs1218752280 3277 dbSNP
rs1246582780 3280 dbSNP
rs1245685242 3281 dbSNP
rs940461850 3290 dbSNP
rs1489085729 3292 dbSNP
rs1202309945 3297 dbSNP
rs908035490 3301 dbSNP
rs549947501 3302 dbSNP
rs1171588291 3304 dbSNP
rs1294970064 3306 dbSNP
rs1027062701 3310 dbSNP
rs575854240 3313 dbSNP
rs960283732 3314 dbSNP
rs1403610849 3315 dbSNP
rs1164189640 3331 dbSNP
rs975137631 3332 dbSNP
rs1437098400 3335 dbSNP
rs1037375187 3337 dbSNP
rs1469712335 3340 dbSNP
rs1304918842 3342 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 140883.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714646. RNA binding protein: AGO2. Condition:mildMNase ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714646
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / mildMNase, repA
Location of target site ENST00000360412.2 | 3UTR | ACAGGGUCUCACUGUUACC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
150 hsa-miR-6818-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT112122 TIMM17A translocase of inner mitochondrial membrane 17A 2 6
MIRT262243 BAMBI BMP and activin membrane bound inhibitor 2 2
MIRT446689 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT449923 TPST2 tyrosylprotein sulfotransferase 2 2 2
MIRT464356 USP12P1 ubiquitin specific peptidase 12 pseudogene 1 2 2
MIRT485703 CBX7 chromobox 7 2 2
MIRT497478 XPR1 xenotropic and polytropic retrovirus receptor 1 2 4
MIRT499435 ODF2L outer dense fiber of sperm tails 2 like 2 8
MIRT514246 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT515032 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515065 PLA2G2C phospholipase A2 group IIC 2 2
MIRT520235 USP9X ubiquitin specific peptidase 9, X-linked 2 4
MIRT523685 FHL2 four and a half LIM domains 2 2 4
MIRT525524 FSIP2 fibrous sheath interacting protein 2 2 2
MIRT525838 FAR2 fatty acyl-CoA reductase 2 2 2
MIRT528583 PTGER3 prostaglandin E receptor 3 2 2
MIRT530404 SULT1B1 sulfotransferase family 1B member 1 2 2
MIRT530703 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT535118 PLSCR4 phospholipid scramblase 4 2 2
MIRT539880 IRGQ immunity related GTPase Q 2 2
MIRT540195 ARHGAP18 Rho GTPase activating protein 18 2 2
MIRT540938 SLC25A43 solute carrier family 25 member 43 2 2
MIRT541501 TOR1AIP1 torsin 1A interacting protein 1 2 2
MIRT542544 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT542559 ZNF280B zinc finger protein 280B 2 2
MIRT542689 RPS15A ribosomal protein S15a 2 2
MIRT548759 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 2
MIRT549735 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT553060 ULK1 unc-51 like autophagy activating kinase 1 2 2
MIRT556303 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT560816 DIP2A disco interacting protein 2 homolog A 2 2
MIRT567455 GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein 2 2
MIRT575143 Cd93 CD93 antigen 2 2
MIRT607217 ACSM2A acyl-CoA synthetase medium chain family member 2A 2 4
MIRT607286 CD300E CD300e molecule 2 6
MIRT607302 RREB1 ras responsive element binding protein 1 2 6
MIRT608645 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT611095 MYO1F myosin IF 2 4
MIRT611576 CLEC4D C-type lectin domain family 4 member D 2 2
MIRT614271 WSCD2 WSC domain containing 2 2 2
MIRT614855 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT617114 KANK2 KN motif and ankyrin repeat domains 2 2 2
MIRT618002 SLC9A3R2 SLC9A3 regulator 2 2 2
MIRT618028 CTU1 cytosolic thiouridylase subunit 1 2 2
MIRT619062 BSND barttin CLCNK type accessory beta subunit 2 4
MIRT619289 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619356 CFHR5 complement factor H related 5 2 2
MIRT620725 CCL16 C-C motif chemokine ligand 16 2 2
MIRT620913 LRRTM2 leucine rich repeat transmembrane neuronal 2 2 2
MIRT621902 TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 2 2
MIRT622025 STAT5A signal transducer and activator of transcription 5A 2 2
MIRT622556 PTPN3 protein tyrosine phosphatase, non-receptor type 3 2 2
MIRT623137 NCKAP1 NCK associated protein 1 2 2
MIRT623140 NAV2 neuron navigator 2 2 2
MIRT623701 HHAT hedgehog acyltransferase 2 2
MIRT624602 B3GALT5 beta-1,3-galactosyltransferase 5 2 2
MIRT625944 OLIG3 oligodendrocyte transcription factor 3 2 2
MIRT625988 SPATA17 spermatogenesis associated 17 2 2
MIRT628028 LSAMP limbic system-associated membrane protein 2 2
MIRT635521 MC2R melanocortin 2 receptor 2 2
MIRT638916 CALCOCO2 calcium binding and coiled-coil domain 2 2 2
MIRT639796 EPX eosinophil peroxidase 2 2
MIRT640344 C1orf210 chromosome 1 open reading frame 210 2 2
MIRT644806 VLDLR very low density lipoprotein receptor 2 2
MIRT645303 AGTRAP angiotensin II receptor associated protein 2 2
MIRT645629 SYTL4 synaptotagmin like 4 2 2
MIRT645683 TBC1D13 TBC1 domain family member 13 2 2
MIRT646216 DUSP10 dual specificity phosphatase 10 2 2
MIRT648505 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT649748 UTP20 UTP20, small subunit processome component 2 2
MIRT649797 CLEC2D C-type lectin domain family 2 member D 2 2
MIRT650482 UFM1 ubiquitin fold modifier 1 2 2
MIRT653199 SP9 Sp9 transcription factor 2 2
MIRT655741 NR2F2 nuclear receptor subfamily 2 group F member 2 2 2
MIRT659978 C2CD2L C2CD2 like 2 2
MIRT660350 BAG4 BCL2 associated athanogene 4 2 2
MIRT662185 MEI1 meiotic double-stranded break formation protein 1 2 2
MIRT663290 TECPR2 tectonin beta-propeller repeat containing 2 2 2
MIRT666817 PRCP prolylcarboxypeptidase 2 2
MIRT671665 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT671838 PDE3A phosphodiesterase 3A 2 2
MIRT672193 F2 coagulation factor II, thrombin 2 2
MIRT673870 KLF2 Kruppel like factor 2 2 2
MIRT683563 CARD8 caspase recruitment domain family member 8 2 2
MIRT684545 ZNF708 zinc finger protein 708 2 2
MIRT685140 TACR3 tachykinin receptor 3 2 2
MIRT685413 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT686039 SLC5A5 solute carrier family 5 member 5 2 2
MIRT686126 B4GALT7 beta-1,4-galactosyltransferase 7 2 2
MIRT687473 NHLRC2 NHL repeat containing 2 2 2
MIRT687946 HHIP hedgehog interacting protein 2 2
MIRT688171 FRRS1 ferric chelate reductase 1 2 2
MIRT688295 FAM208A family with sequence similarity 208 member A 2 2
MIRT689044 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT689194 ZNF574 zinc finger protein 574 2 2
MIRT691253 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT695358 PHAX phosphorylated adaptor for RNA export 2 2
MIRT696674 APOC3 apolipoprotein C3 2 2
MIRT697358 ZNF394 zinc finger protein 394 2 2
MIRT697604 XIAP X-linked inhibitor of apoptosis 2 2
MIRT697726 USP6NL USP6 N-terminal like 2 2
MIRT697776 UBXN7 UBX domain protein 7 2 2
MIRT698478 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT698984 SPAG9 sperm associated antigen 9 2 2
MIRT699851 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT700172 RIMKLB ribosomal modification protein rimK like family member B 2 2
MIRT704339 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT704589 CLN8 CLN8, transmembrane ER and ERGIC protein 2 2
MIRT705836 AHCY adenosylhomocysteinase 2 2
MIRT707085 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT707132 TRA2B transformer 2 beta homolog 2 2
MIRT707145 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT707234 H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase 2 2
MIRT707347 XPNPEP3 X-prolyl aminopeptidase 3 2 2
MIRT707445 PPFIBP1 PPFIA binding protein 1 2 2
MIRT707494 AXL AXL receptor tyrosine kinase 2 2
MIRT707638 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT707690 FAM118A family with sequence similarity 118 member A 2 2
MIRT707706 CDC6 cell division cycle 6 2 2
MIRT707817 TMEM170A transmembrane protein 170A 2 2
MIRT707957 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT707996 NUDT4 nudix hydrolase 4 2 2
MIRT708026 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT708058 LIX1L limb and CNS expressed 1 like 2 2
MIRT708089 KIAA1671 KIAA1671 2 2
MIRT708125 GK5 glycerol kinase 5 (putative) 2 2
MIRT708194 ANP32E acidic nuclear phosphoprotein 32 family member E 2 2
MIRT708201 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT710503 BSDC1 BSD domain containing 1 2 2
MIRT711308 IFNGR2 interferon gamma receptor 2 2 2
MIRT711740 DTX1 deltex E3 ubiquitin ligase 1 2 2
MIRT713202 SOCS6 suppressor of cytokine signaling 6 2 2
MIRT714380 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT715210 NPVF neuropeptide VF precursor 2 2
MIRT715559 EPHB4 EPH receptor B4 2 2
MIRT715835 SZT2 SZT2, KICSTOR complex subunit 2 2
MIRT716680 HLA-B major histocompatibility complex, class I, B 2 2
MIRT717660 THBS2 thrombospondin 2 2 2
MIRT718132 PALM paralemmin 2 2
MIRT718322 METTL7A methyltransferase like 7A 2 2
MIRT720693 RNF217 ring finger protein 217 2 2
MIRT720727 ELOVL7 ELOVL fatty acid elongase 7 2 2
MIRT721376 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721983 FAM214B family with sequence similarity 214 member B 2 2
MIRT722163 MRPS15 mitochondrial ribosomal protein S15 2 2
MIRT722881 MOB3A MOB kinase activator 3A 2 2
MIRT723218 FMNL3 formin like 3 2 2
MIRT723788 MUC17 mucin 17, cell surface associated 2 2
MIRT724093 TMEM199 transmembrane protein 199 2 2
MIRT725265 OSTM1 osteopetrosis associated transmembrane protein 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6818-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-6818-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-6818-3p Cisplatin 5460033 NSC119875 approved resistant cell line (MGC-803)

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