pre-miRNA Information
pre-miRNA hsa-mir-367   
Genomic Coordinates chr4: 112647874 - 112647941
Synonyms MIRN367, hsa-mir-367, MIR367
Description Homo sapiens miR-367 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-367-3p
Sequence 44| AAUUGCACUUUAGCAAUGGUGA |65
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN24411246 17 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs535597757 1 dbSNP
rs1013348949 11 dbSNP
rs896333735 12 dbSNP
rs751269136 14 dbSNP
rs1163501507 16 dbSNP
rs757092597 21 dbSNP
Putative Targets

Gene Information
Gene Symbol ZSCAN12   
Synonyms ZFP96, ZNF29K1, ZNF305, ZNF96, dJ29K1.2
Description zinc finger and SCAN domain containing 12
Transcript NM_001163391   
Expression
Putative miRNA Targets on ZSCAN12
3'UTR of ZSCAN12
(miRNA target sites are highlighted)
>ZSCAN12|NM_001163391|3'UTR
   1 TGACTACAGGGAAGTTATCTCACAGAGTTCAGGCCGGTGAGAAATACTATTTAGCTTTACAATTATTGGGGCAAAACTTC
  81 AGTCACCATTGTTATAAGGAAACCTCAGATATTTAATAAGAATTCACTGTGTGCTGCCCATTGTACTACGTGCTGTGGAG
 161 AACAAGAAGATAACCCCAAACTCTTTTCTCAGAGAGTTTGTAGCCTAGTTTGGGATAGATAAGATCCACATATTTAGTCA
 241 TATAAGACTACAGGAGAGTAGAATTGATGCACCAGATGGTGTCGAATGAAAGTGGTACTTTGTAACAGACTATAAGTGCT
 321 GTAAATTCTAAAGGACAGGTTACTTTTGCCTGGAGTGGTCAAGAAAGATTTTATTTAAAATAAGGATTTGACGGGCAGAC
 401 TTAGCAGTCAAAAGGGAGAAAGCGGGTAAAACAAATGTAAGCCATCATAAGAGTGCATGTGGTTTGGAAGCATCAGGGAA
 481 AAGACTAGCCAACCTGAAGTAAAAGGTTCGTGCAAATTGGGCAATCAATAGCATTAAGTTGGAAACAGCTTGGGGACAGA
 561 CACATAAGAGGGCCAGAGTGTGAATAATTTCATCTAATACTTTATAGCACTTGGACATTTACAGAGCACTTTTCTCAATT
 641 CCTAAAATACCTTGGTAAATCAAAAGCATTCTCCATTTTAAAAATGAGAATACTCTTGCCTATGGAGATGGCAACATAGC
 721 TATAATCCCACACAAAGAAAAAGACCAGTAACCTAAGTGCAGGTCTTTTGACTTCTAGTCCTGGCCATTACTCTAGTGAT
 801 CCTCCAACTTTGATGAACATCAAAATCATGTTTGGAGCTTGTTTAACATCCCTGAATCCCACTCACATTCTGCTTCATTA
 881 GGCCTAGGATGGGAGTTGAGAATCTTCATTTTTATAGCTCCACAGTTACTTAATATACTTTAAAATTTGAGAAGCGTTGA
 961 GTTGAATGACAGCTGACTTCATGGCTGTCTGCGAAGTGGGGAAGCCTGAACACAGTCCTATAAACTAAAGGCCACTGCAG
1041 ACTTTTAGCACAAGGAGATCCTTACAGGGAACATGTGCCATCAGCTCTTTGGAGTGAACAAGGAATTAGACCCCCATCAT
1121 GCCAAAAAACTAGGATTTTTAGGTGGTCTTTCCATCCCTTCAGATTTAAGTATTCAAAGAAAGAGAGACAGACCTACATT
1201 CCAAGGGTCTTCTGAGTGCAAGGCCTTGTGTTGTTTGTTTATTTAGGGGAGGGCCTGGTGCTCTTCTCTGTTTTATGCTT
1281 TACCTTCTTTTATTTCTCAGATCTCATGTTAGCACTATGTTCTGAATTCCCTAATAATGGCTCTTGAGAACTGATTTACA
1361 TTTTGTTGGTTTGTTTACTTCTTGAGCACATAAAAGGACCCCAAATTAGAGATACTATCCCTTGGGCTTCTGAAAAATGA
1441 ATCAACCAAAACTGGTTGACTCTAACCTTGCCTTGCTGAGTAAAAATTCTGCTTTGGATGAGAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agugguaACGAUUUCACGUUaa 5'
                 | || :|||||||  
Target 5' aagggtcTTCT-GAGTGCAAgg 3'
1203 - 1223 130.00 -8.30
2
miRNA  3' agUGGUAA--CGAUUUCACGUUaa 5'
            |||| |   || |||||||:  
Target 5' agACCAGTAACCT-AAGTGCAGgt 3'
742 - 764 125.00 -12.72
3
miRNA  3' agUGGUAACGAUUUCACGUuaa 5'
            :||||  : |:||||||   
Target 5' aaGCCATCATAAGAGTGCAtgt 3'
439 - 460 124.00 -12.32
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN8513907 8 COSMIC
COSN28397321 35 COSMIC
COSN32046083 74 COSMIC
COSN7869474 188 COSMIC
COSN20102526 304 COSMIC
COSN26227762 472 COSMIC
COSN9779345 474 COSMIC
COSN24962436 542 COSMIC
COSN16882924 576 COSMIC
COSN2158520 748 COSMIC
COSN29902174 776 COSMIC
COSN21377920 864 COSMIC
COSN23648025 1273 COSMIC
COSN15926252 1350 COSMIC
COSN22414202 1938 COSMIC
COSN4954995 2359 COSMIC
COSN25354983 2772 COSMIC
COSN9779344 2801 COSMIC
COSN21057163 3017 COSMIC
COSN27071912 3181 COSMIC
COSN21861751 3280 COSMIC
COSN24204837 3387 COSMIC
COSN22111239 3607 COSMIC
COSN21332146 3631 COSMIC
COSN16996472 3729 COSMIC
COSN23727102 3829 COSMIC
COSN9312136 3988 COSMIC
COSN7789650 4032 COSMIC
COSN19465373 4853 COSMIC
COSN227488 5082 COSMIC
COSN26464302 5198 COSMIC
COSN21636244 5283 COSMIC
COSN6317673 5568 COSMIC
COSN7869473 5599 COSMIC
COSN26549996 5614 COSMIC
rs13213986 222 GWAS
rs181122333 3079 GWAS
rs67981811 3396 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1341743819 4 dbSNP
rs1331702458 6 dbSNP
rs1368739312 7 dbSNP
rs375236272 9 dbSNP
rs79433518 10 dbSNP
rs573886439 27 dbSNP
rs753105842 28 dbSNP
rs765569694 35 dbSNP
rs2859379 36 dbSNP
rs1473780437 37 dbSNP
rs753490313 49 dbSNP
rs145458218 66 dbSNP
rs551419471 81 dbSNP
rs1254014854 89 dbSNP
rs541681025 95 dbSNP
rs953916570 99 dbSNP
rs192126275 104 dbSNP
rs557449869 109 dbSNP
rs150686870 115 dbSNP
rs1039332603 130 dbSNP
rs943233745 132 dbSNP
rs1389367985 137 dbSNP
rs1403162794 147 dbSNP
rs116149050 150 dbSNP
rs1314826617 155 dbSNP
rs891887766 156 dbSNP
rs1032144788 157 dbSNP
rs566020938 161 dbSNP
rs549271552 163 dbSNP
rs1342821078 181 dbSNP
rs1351831906 194 dbSNP
rs1280781122 197 dbSNP
rs868451074 211 dbSNP
rs904508080 214 dbSNP
rs1219454382 216 dbSNP
rs1044701761 219 dbSNP
rs13213986 222 dbSNP
rs896030885 232 dbSNP
rs1057326419 241 dbSNP
rs1354332134 242 dbSNP
rs929428861 244 dbSNP
rs1290705465 245 dbSNP
rs1490481484 245 dbSNP
rs1035959191 254 dbSNP
rs1260732985 258 dbSNP
rs1478711519 260 dbSNP
rs9468365 265 dbSNP
rs1459778333 272 dbSNP
rs1386821403 278 dbSNP
rs188811685 280 dbSNP
rs941066827 283 dbSNP
rs756408550 284 dbSNP
rs1457918863 290 dbSNP
rs985384979 296 dbSNP
rs1196812870 297 dbSNP
rs886189367 298 dbSNP
rs201107997 305 dbSNP
rs199939013 306 dbSNP
rs1333929034 308 dbSNP
rs34325224 308 dbSNP
rs67123064 308 dbSNP
rs746467535 308 dbSNP
rs1338872626 310 dbSNP
rs953968558 317 dbSNP
rs1192793619 318 dbSNP
rs1463382548 319 dbSNP
rs140721403 323 dbSNP
rs976568849 325 dbSNP
rs1208991895 335 dbSNP
rs997201314 336 dbSNP
rs1283875800 349 dbSNP
rs956044480 367 dbSNP
rs1489230948 373 dbSNP
rs1205446545 379 dbSNP
rs1031780962 380 dbSNP
rs1038973196 392 dbSNP
rs1189242632 393 dbSNP
rs1243195482 394 dbSNP
rs1231871823 406 dbSNP
rs1438602280 409 dbSNP
rs1312202993 421 dbSNP
rs1302587964 422 dbSNP
rs1454782290 423 dbSNP
rs36092177 424 dbSNP
rs968786219 447 dbSNP
rs1397982011 449 dbSNP
rs1337703164 457 dbSNP
rs1022974717 458 dbSNP
rs1444567987 470 dbSNP
rs1320277618 479 dbSNP
rs1436145262 480 dbSNP
rs1012887878 481 dbSNP
rs896081366 484 dbSNP
rs1465622219 486 dbSNP
rs913326787 493 dbSNP
rs1342676049 503 dbSNP
rs1243447710 505 dbSNP
rs1378209436 505 dbSNP
rs368514472 506 dbSNP
rs1457046061 507 dbSNP
rs1057374258 508 dbSNP
rs993703575 510 dbSNP
rs541062771 515 dbSNP
rs1447530808 523 dbSNP
rs1247226553 524 dbSNP
rs1188962288 528 dbSNP
rs1376270810 550 dbSNP
rs1467957814 552 dbSNP
rs1177602289 556 dbSNP
rs1399755011 563 dbSNP
rs1464286004 564 dbSNP
rs1333405767 570 dbSNP
rs1374202019 572 dbSNP
rs1391878863 587 dbSNP
rs1300577632 594 dbSNP
rs1466020707 598 dbSNP
rs980409184 603 dbSNP
rs1225049394 613 dbSNP
rs781108094 613 dbSNP
rs970292675 631 dbSNP
rs1036817275 651 dbSNP
rs1345143987 652 dbSNP
rs1316876221 653 dbSNP
rs941105750 655 dbSNP
rs909596563 666 dbSNP
rs1049396541 669 dbSNP
rs1196414076 671 dbSNP
rs1016483555 673 dbSNP
rs1480706536 690 dbSNP
rs1006397904 693 dbSNP
rs932293135 698 dbSNP
rs754857468 702 dbSNP
rs922543147 711 dbSNP
rs1423396543 718 dbSNP
rs950828649 720 dbSNP
rs1173158848 728 dbSNP
rs976621416 731 dbSNP
rs1355177342 737 dbSNP
rs1457527996 742 dbSNP
rs955931324 744 dbSNP
rs924436400 748 dbSNP
rs1388418529 750 dbSNP
rs978577802 758 dbSNP
rs1406722801 764 dbSNP
rs146867358 777 dbSNP
rs1339648049 783 dbSNP
rs1367726936 792 dbSNP
rs1297357039 795 dbSNP
rs1307718482 801 dbSNP
rs1220108200 803 dbSNP
rs1263190247 806 dbSNP
rs1026080516 813 dbSNP
rs997655379 817 dbSNP
rs1332445324 818 dbSNP
rs183428082 819 dbSNP
rs1196111737 838 dbSNP
rs760080054 845 dbSNP
rs1012940059 849 dbSNP
rs1007470145 853 dbSNP
rs960009469 866 dbSNP
rs1427814706 882 dbSNP
rs1043589138 897 dbSNP
rs1169078388 910 dbSNP
rs1451103057 917 dbSNP
rs1303746749 928 dbSNP
rs945223951 936 dbSNP
rs1359657560 938 dbSNP
rs375547737 955 dbSNP
rs1290422138 956 dbSNP
rs1362157658 959 dbSNP
rs994149061 962 dbSNP
rs751455560 963 dbSNP
rs540579944 968 dbSNP
rs542966190 970 dbSNP
rs573847303 977 dbSNP
rs1016848307 983 dbSNP
rs757940160 987 dbSNP
rs1274574846 988 dbSNP
rs1286017237 991 dbSNP
rs1206418068 992 dbSNP
rs143819164 993 dbSNP
rs1049447339 999 dbSNP
rs1180387251 1004 dbSNP
rs1245030056 1008 dbSNP
rs932343963 1011 dbSNP
rs1445384659 1018 dbSNP
rs980509385 1020 dbSNP
rs370163566 1032 dbSNP
rs1243251284 1043 dbSNP
rs1379544237 1045 dbSNP
rs900835936 1046 dbSNP
rs1160966077 1054 dbSNP
rs1341289173 1060 dbSNP
rs1446810966 1063 dbSNP
rs1315007436 1064 dbSNP
rs140117745 1065 dbSNP
rs1452644955 1066 dbSNP
rs372813638 1073 dbSNP
rs1369954652 1074 dbSNP
rs1375266947 1075 dbSNP
rs1226010710 1079 dbSNP
rs762213979 1083 dbSNP
rs1312036037 1085 dbSNP
rs1384553200 1088 dbSNP
rs934574022 1090 dbSNP
rs1308588799 1094 dbSNP
rs1461947227 1112 dbSNP
rs1178041023 1116 dbSNP
rs749972422 1119 dbSNP
rs1431492849 1132 dbSNP
rs924515632 1147 dbSNP
rs1388365968 1157 dbSNP
rs1468505719 1182 dbSNP
rs1178932847 1185 dbSNP
rs1408427445 1187 dbSNP
rs1413764930 1189 dbSNP
rs146587637 1202 dbSNP
rs1407776954 1213 dbSNP
rs192420796 1217 dbSNP
rs1330045995 1224 dbSNP
rs950882865 1231 dbSNP
rs1444970077 1241 dbSNP
rs916020297 1263 dbSNP
rs1280709377 1271 dbSNP
rs1367517670 1274 dbSNP
rs1217772038 1275 dbSNP
rs1285607527 1286 dbSNP
rs1369826504 1292 dbSNP
rs1179502807 1305 dbSNP
rs761563651 1315 dbSNP
rs1251860347 1318 dbSNP
rs1256210554 1321 dbSNP
rs1206530259 1322 dbSNP
rs1440040095 1330 dbSNP
rs1206533114 1333 dbSNP
rs960061271 1368 dbSNP
rs966182463 1369 dbSNP
rs1035690805 1373 dbSNP
rs1288221049 1377 dbSNP
rs1209601171 1389 dbSNP
rs1357424876 1391 dbSNP
rs1017314522 1392 dbSNP
rs1007187085 1397 dbSNP
rs972051558 1400 dbSNP
rs1275287289 1401 dbSNP
rs962616305 1408 dbSNP
rs1009421532 1413 dbSNP
rs892329055 1439 dbSNP
rs775709670 1445 dbSNP
rs1016489969 1451 dbSNP
rs1444339547 1463 dbSNP
rs1346590011 1466 dbSNP
rs1329267561 1469 dbSNP
rs1218235736 1497 dbSNP
rs1056693930 1502 dbSNP
rs907286676 1505 dbSNP
rs1322720897 1508 dbSNP
rs1405756288 1509 dbSNP
rs1006821443 1510 dbSNP
rs1220219540 1521 dbSNP
rs948715104 1542 dbSNP
rs1156548958 1551 dbSNP
rs889266300 1556 dbSNP
rs1192668501 1558 dbSNP
rs1028059931 1561 dbSNP
rs996547938 1564 dbSNP
rs534278807 1571 dbSNP
rs1183677794 1576 dbSNP
rs985068680 1583 dbSNP
rs929533693 1610 dbSNP
rs142865926 1617 dbSNP
rs1399712323 1624 dbSNP
rs1436887587 1635 dbSNP
rs767869881 1642 dbSNP
rs919470198 1654 dbSNP
rs377445293 1663 dbSNP
rs1328378131 1666 dbSNP
rs976658568 1667 dbSNP
rs1245496260 1674 dbSNP
rs774688391 1689 dbSNP
rs966203946 1690 dbSNP
rs903116765 1691 dbSNP
rs555610656 1705 dbSNP
rs1354398037 1710 dbSNP
rs1243673688 1715 dbSNP
rs1293767299 1716 dbSNP
rs947231014 1722 dbSNP
rs1215557923 1741 dbSNP
rs915738715 1749 dbSNP
rs1259436880 1752 dbSNP
rs576271812 1761 dbSNP
rs991613054 1771 dbSNP
rs938751340 1777 dbSNP
rs564546738 1784 dbSNP
rs759771333 1787 dbSNP
rs1207110853 1801 dbSNP
rs1442315577 1809 dbSNP
rs1328710252 1810 dbSNP
rs1386343321 1811 dbSNP
rs928703240 1814 dbSNP
rs1419649790 1821 dbSNP
rs1268917042 1822 dbSNP
rs759827066 1824 dbSNP
rs1387651307 1825 dbSNP
rs1401484332 1826 dbSNP
rs188724146 1830 dbSNP
rs1342892308 1836 dbSNP
rs1454591989 1839 dbSNP
rs1315844172 1842 dbSNP
rs1383382191 1854 dbSNP
rs749802351 1856 dbSNP
rs909480016 1857 dbSNP
rs550085208 1862 dbSNP
rs1258715523 1868 dbSNP
rs1352644534 1871 dbSNP
rs533621752 1882 dbSNP
rs985049821 1884 dbSNP
rs546296960 1903 dbSNP
rs1277397668 1912 dbSNP
rs1437064174 1913 dbSNP
rs1372941921 1917 dbSNP
rs1184852705 1921 dbSNP
rs1243258453 1922 dbSNP
rs1439592469 1927 dbSNP
rs953583009 1937 dbSNP
rs1029118458 1941 dbSNP
rs997604660 1945 dbSNP
rs570817133 1952 dbSNP
rs965111420 1953 dbSNP
rs1172371973 1955 dbSNP
rs1160849055 1962 dbSNP
rs1412263423 1975 dbSNP
rs79476469 1976 dbSNP
rs771453095 1978 dbSNP
rs1471093885 1982 dbSNP
rs998951000 1985 dbSNP
rs527660072 2000 dbSNP
rs1172528268 2001 dbSNP
rs1399708288 2010 dbSNP
rs1390735315 2022 dbSNP
rs562081223 2024 dbSNP
rs1304867734 2026 dbSNP
rs1337470094 2029 dbSNP
rs1239430605 2034 dbSNP
rs148520383 2035 dbSNP
rs1320923746 2036 dbSNP
rs773321907 2039 dbSNP
rs867990079 2042 dbSNP
rs769905166 2047 dbSNP
rs1253210600 2050 dbSNP
rs1420225475 2051 dbSNP
rs1187057112 2062 dbSNP
rs1427683497 2065 dbSNP
rs1481528268 2074 dbSNP
rs1464658657 2078 dbSNP
rs1423001394 2080 dbSNP
rs887810655 2084 dbSNP
rs1299984399 2088 dbSNP
rs375216302 2096 dbSNP
rs1398485843 2109 dbSNP
rs1011495911 2110 dbSNP
rs894358989 2112 dbSNP
rs1218135635 2114 dbSNP
rs919510191 2122 dbSNP
rs780365466 2124 dbSNP
rs1306573104 2132 dbSNP
rs546913221 2142 dbSNP
rs1055643962 2149 dbSNP
rs910703513 2162 dbSNP
rs1222463533 2166 dbSNP
rs1267196885 2172 dbSNP
rs1490961706 2179 dbSNP
rs1200605171 2188 dbSNP
rs1423114179 2200 dbSNP
rs1426987697 2209 dbSNP
rs1172573264 2213 dbSNP
rs770493657 2214 dbSNP
rs985873076 2216 dbSNP
rs781283716 2229 dbSNP
rs928732650 2252 dbSNP
rs967763523 2253 dbSNP
rs182924249 2269 dbSNP
rs914948831 2276 dbSNP
rs987772086 2291 dbSNP
rs1036432916 2296 dbSNP
rs768430293 2297 dbSNP
rs34090740 2300 dbSNP
rs575842247 2312 dbSNP
rs1365570257 2316 dbSNP
rs1307631263 2320 dbSNP
rs1245878577 2322 dbSNP
rs1290135099 2340 dbSNP
rs1035363440 2341 dbSNP
rs376365180 2341 dbSNP
rs1223623227 2347 dbSNP
rs9461458 2356 dbSNP
rs1484998418 2357 dbSNP
rs1403020912 2360 dbSNP
rs1445294275 2372 dbSNP
rs984715419 2388 dbSNP
rs1423388644 2389 dbSNP
rs1181834721 2394 dbSNP
rs780089130 2401 dbSNP
rs1426504950 2404 dbSNP
rs1163943842 2406 dbSNP
rs953636573 2417 dbSNP
rs758455902 2422 dbSNP
rs1451159229 2423 dbSNP
rs1023463593 2427 dbSNP
rs1167200528 2429 dbSNP
rs1449250605 2430 dbSNP
rs1013044184 2437 dbSNP
rs9366719 2440 dbSNP
rs749919148 2441 dbSNP
rs535896947 2444 dbSNP
rs778627836 2445 dbSNP
rs1247397864 2454 dbSNP
rs1283980121 2458 dbSNP
rs1019811325 2459 dbSNP
rs149340071 2460 dbSNP
rs756843523 2480 dbSNP
rs1486646454 2481 dbSNP
rs1181785227 2485 dbSNP
rs1245082657 2491 dbSNP
rs1446343930 2493 dbSNP
rs75349236 2500 dbSNP
rs1204300027 2501 dbSNP
rs9468364 2520 dbSNP
rs77082598 2521 dbSNP
rs944964264 2522 dbSNP
rs554926183 2531 dbSNP
rs1377977743 2534 dbSNP
rs766842239 2541 dbSNP
rs535108227 2544 dbSNP
rs1407723157 2559 dbSNP
rs74525464 2560 dbSNP
rs1279559998 2565 dbSNP
rs551199150 2571 dbSNP
rs189738468 2576 dbSNP
rs909252638 2577 dbSNP
rs1308196531 2613 dbSNP
rs1323049981 2614 dbSNP
rs1202058581 2621 dbSNP
rs1429623990 2631 dbSNP
rs1265063150 2634 dbSNP
rs1355534227 2642 dbSNP
rs1461882968 2646 dbSNP
rs1203918823 2649 dbSNP
rs1049062438 2650 dbSNP
rs1172948056 2653 dbSNP
rs1412490871 2655 dbSNP
rs140627633 2656 dbSNP
rs982469878 2658 dbSNP
rs969327178 2663 dbSNP
rs557844947 2667 dbSNP
rs983960886 2668 dbSNP
rs922209402 2671 dbSNP
rs1353221292 2682 dbSNP
rs1188854027 2684 dbSNP
rs1445037293 2702 dbSNP
rs952494392 2712 dbSNP
rs1345337244 2717 dbSNP
rs976290909 2722 dbSNP
rs944903317 2723 dbSNP
rs924129366 2728 dbSNP
rs1249648834 2738 dbSNP
rs1181427653 2744 dbSNP
rs1483321908 2745 dbSNP
rs1252920551 2746 dbSNP
rs993577767 2755 dbSNP
rs1490144609 2767 dbSNP
rs1197022984 2774 dbSNP
rs1270522870 2781 dbSNP
rs978625072 2786 dbSNP
rs967163003 2788 dbSNP
rs1478166880 2790 dbSNP
rs897850709 2792 dbSNP
rs1018938604 2801 dbSNP
rs1412116665 2810 dbSNP
rs1169852041 2812 dbSNP
rs1365510043 2817 dbSNP
rs185715451 2820 dbSNP
rs1219089488 2824 dbSNP
rs1009603535 2826 dbSNP
rs9380075 2827 dbSNP
rs1320827679 2831 dbSNP
rs1290159915 2832 dbSNP
rs562583110 2834 dbSNP
rs889369034 2837 dbSNP
rs1346343806 2847 dbSNP
rs1430331596 2850 dbSNP
rs989833204 2851 dbSNP
rs1268470424 2861 dbSNP
rs1341635056 2868 dbSNP
rs539140007 2872 dbSNP
rs534272353 2873 dbSNP
rs568598484 2883 dbSNP
rs1348115660 2885 dbSNP
rs548601363 2891 dbSNP
rs1034298920 2894 dbSNP
rs1287136828 2904 dbSNP
rs1488586247 2907 dbSNP
rs1002784391 2909 dbSNP
rs946900908 2909 dbSNP
rs1409791724 2912 dbSNP
rs893954762 2916 dbSNP
rs907072336 2921 dbSNP
rs1476068915 2937 dbSNP
rs1374687986 2941 dbSNP
rs1052641108 2944 dbSNP
rs1300330203 2948 dbSNP
rs1385101010 2976 dbSNP
rs1423330329 2996 dbSNP
rs754751566 3009 dbSNP
rs935085697 3028 dbSNP
rs1391966017 3039 dbSNP
rs1290318067 3043 dbSNP
rs1400326728 3060 dbSNP
rs181122333 3079 dbSNP
rs1328432911 3087 dbSNP
rs1435834806 3093 dbSNP
rs1314490683 3094 dbSNP
rs1381903971 3100 dbSNP
rs1005093171 3105 dbSNP
rs981802083 3108 dbSNP
rs1356867497 3109 dbSNP
rs1204333471 3110 dbSNP
rs1281627779 3111 dbSNP
rs1349619747 3115 dbSNP
rs1165951941 3116 dbSNP
rs1443302107 3117 dbSNP
rs887883920 3121 dbSNP
rs1186028326 3122 dbSNP
rs1463188942 3125 dbSNP
rs768782065 3127 dbSNP
rs1157207408 3132 dbSNP
rs932013110 3135 dbSNP
rs947666582 3136 dbSNP
rs900503370 3137 dbSNP
rs1040642861 3140 dbSNP
rs1314696284 3159 dbSNP
rs746775528 3160 dbSNP
rs780033238 3161 dbSNP
rs1419657350 3170 dbSNP
rs1277585702 3172 dbSNP
rs944979177 3181 dbSNP
rs1228680827 3182 dbSNP
rs1261954516 3195 dbSNP
rs924154513 3202 dbSNP
rs1189328547 3204 dbSNP
rs1205025178 3206 dbSNP
rs563399190 3210 dbSNP
rs1437787031 3223 dbSNP
rs1247022283 3227 dbSNP
rs772127156 3228 dbSNP
rs1473031192 3229 dbSNP
rs1176057746 3231 dbSNP
rs550050082 3233 dbSNP
rs1267013819 3252 dbSNP
rs1008907904 3263 dbSNP
rs568659318 3265 dbSNP
rs1309795417 3266 dbSNP
rs17314224 3285 dbSNP
rs760849561 3287 dbSNP
rs1034016063 3295 dbSNP
rs1326581913 3300 dbSNP
rs1011097919 3301 dbSNP
rs1443461534 3311 dbSNP
rs1282173214 3315 dbSNP
rs1386704705 3325 dbSNP
rs1234724698 3343 dbSNP
rs1256112351 3345 dbSNP
rs1339273532 3346 dbSNP
rs1194643645 3347 dbSNP
rs1253091364 3348 dbSNP
rs1483546454 3354 dbSNP
rs981477303 3355 dbSNP
rs1266975740 3359 dbSNP
rs1481558502 3361 dbSNP
rs1176840197 3364 dbSNP
rs1372627105 3369 dbSNP
rs540901232 3372 dbSNP
rs1052610737 3380 dbSNP
rs1372336254 3382 dbSNP
rs1410142510 3386 dbSNP
rs1365571114 3387 dbSNP
rs571784505 3393 dbSNP
rs753313261 3394 dbSNP
rs67981811 3396 dbSNP
rs1325410428 3408 dbSNP
rs1027729364 3423 dbSNP
rs996213802 3428 dbSNP
rs900554639 3430 dbSNP
rs1277316698 3445 dbSNP
rs1046541271 3464 dbSNP
rs1222159927 3465 dbSNP
rs371607888 3468 dbSNP
rs1463315762 3469 dbSNP
rs1040359572 3470 dbSNP
rs947719938 3476 dbSNP
rs1205288582 3487 dbSNP
rs1486573184 3491 dbSNP
rs374808405 3495 dbSNP
rs1426743662 3502 dbSNP
rs1195438126 3522 dbSNP
rs1231752418 3523 dbSNP
rs916231040 3524 dbSNP
rs902784156 3527 dbSNP
rs1363542171 3533 dbSNP
rs984066787 3534 dbSNP
rs1383805110 3538 dbSNP
rs1268846441 3539 dbSNP
rs1379973940 3544 dbSNP
rs931210357 3561 dbSNP
rs190211454 3566 dbSNP
rs1245950016 3573 dbSNP
rs946935455 3574 dbSNP
rs915406649 3575 dbSNP
rs1222778316 3579 dbSNP
rs1054247379 3580 dbSNP
rs111708943 3584 dbSNP
rs1485029588 3591 dbSNP
rs965553613 3597 dbSNP
rs1248770784 3599 dbSNP
rs937078632 3602 dbSNP
rs1182978260 3603 dbSNP
rs771712095 3603 dbSNP
rs911994945 3608 dbSNP
rs1425270418 3609 dbSNP
rs1165240447 3610 dbSNP
rs7764737 3616 dbSNP
rs981147423 3617 dbSNP
rs971449936 3622 dbSNP
rs1452543153 3626 dbSNP
rs907812351 3629 dbSNP
rs762021304 3638 dbSNP
rs540142828 3641 dbSNP
rs951920186 3645 dbSNP
rs1229200364 3646 dbSNP
rs766787370 3651 dbSNP
rs763322065 3663 dbSNP
rs1031634843 3664 dbSNP
rs1389279286 3669 dbSNP
rs999710453 3674 dbSNP
rs906670044 3683 dbSNP
rs1367579257 3687 dbSNP
rs1201862663 3691 dbSNP
rs1484211156 3697 dbSNP
rs556459380 3697 dbSNP
rs7764722 3698 dbSNP
rs1429892185 3699 dbSNP
rs894846376 3700 dbSNP
rs1471397521 3702 dbSNP
rs1048089462 3708 dbSNP
rs765693753 3717 dbSNP
rs1008922665 3718 dbSNP
rs902499196 3721 dbSNP
rs867742171 3743 dbSNP
rs528810801 3746 dbSNP
rs1297944960 3748 dbSNP
rs1371708044 3758 dbSNP
rs1411897914 3763 dbSNP
rs114031556 3766 dbSNP
rs554323535 3767 dbSNP
rs1323114451 3772 dbSNP
rs1055311492 3774 dbSNP
rs938135595 3801 dbSNP
rs943906516 3809 dbSNP
rs1213592630 3810 dbSNP
rs912367532 3818 dbSNP
rs987547435 3819 dbSNP
rs927052059 3824 dbSNP
rs1045875544 3826 dbSNP
rs953457356 3839 dbSNP
rs921978561 3841 dbSNP
rs564686354 3857 dbSNP
rs534443478 3871 dbSNP
rs1356100181 3876 dbSNP
rs879790986 3882 dbSNP
rs907529476 3894 dbSNP
rs796423789 3898 dbSNP
rs1415556397 3899 dbSNP
rs1427715885 3900 dbSNP
rs1170277560 3913 dbSNP
rs138102268 3914 dbSNP
rs548713154 3933 dbSNP
rs1369759383 3935 dbSNP
rs1308988464 3942 dbSNP
rs1345153851 3944 dbSNP
rs1168274362 3953 dbSNP
rs1403286115 3954 dbSNP
rs958249264 3955 dbSNP
rs951970577 3956 dbSNP
rs1031268964 3962 dbSNP
rs1272275965 3974 dbSNP
rs3799499 3981 dbSNP
rs1275036023 3983 dbSNP
rs1186318431 3987 dbSNP
rs1025555839 3989 dbSNP
rs1247949575 3991 dbSNP
rs974567920 4004 dbSNP
rs150335033 4005 dbSNP
rs1388908985 4007 dbSNP
rs894900271 4009 dbSNP
rs1048139931 4017 dbSNP
rs1019057922 4027 dbSNP
rs1258941601 4031 dbSNP
rs1009389292 4032 dbSNP
rs141204233 4035 dbSNP
rs1350673370 4047 dbSNP
rs943941921 4048 dbSNP
rs371871735 4062 dbSNP
rs776093383 4063 dbSNP
rs1049550214 4069 dbSNP
rs1298076677 4076 dbSNP
rs1358376399 4084 dbSNP
rs570682575 4087 dbSNP
rs1010879880 4088 dbSNP
rs1451794776 4099 dbSNP
rs1232861442 4101 dbSNP
rs1356203031 4102 dbSNP
rs776622342 4103 dbSNP
rs1214498834 4115 dbSNP
rs1245619437 4116 dbSNP
rs1295168561 4117 dbSNP
rs1189701452 4120 dbSNP
rs1385156502 4131 dbSNP
rs547185718 4142 dbSNP
rs1165342422 4152 dbSNP
rs1414850301 4154 dbSNP
rs1400300754 4164 dbSNP
rs1318645249 4184 dbSNP
rs1349779828 4186 dbSNP
rs1215527768 4197 dbSNP
rs1437191898 4199 dbSNP
rs1321211842 4208 dbSNP
rs922031024 4211 dbSNP
rs187077794 4218 dbSNP
rs866325751 4220 dbSNP
rs1388256482 4237 dbSNP
rs1285696508 4242 dbSNP
rs936708207 4249 dbSNP
rs923923678 4255 dbSNP
rs1002399371 4259 dbSNP
rs148208741 4261 dbSNP
rs1419443346 4264 dbSNP
rs978400825 4268 dbSNP
rs971384430 4271 dbSNP
rs1190085160 4276 dbSNP
rs1045523205 4301 dbSNP
rs949842371 4313 dbSNP
rs1157127697 4314 dbSNP
rs1414455771 4319 dbSNP
rs1232828572 4330 dbSNP
rs764342682 4331 dbSNP
rs143034365 4335 dbSNP
rs930289666 4344 dbSNP
rs181672748 4372 dbSNP
rs2531826 4373 dbSNP
rs1213343572 4374 dbSNP
rs943240089 4384 dbSNP
rs1008187740 4386 dbSNP
rs1330748332 4387 dbSNP
rs891042856 4399 dbSNP
rs1261923492 4400 dbSNP
rs911713507 4404 dbSNP
rs1049601258 4410 dbSNP
rs987284807 4414 dbSNP
rs1202641276 4415 dbSNP
rs967206387 4436 dbSNP
rs932502577 4439 dbSNP
rs892950676 4443 dbSNP
rs1180452033 4447 dbSNP
rs7763846 4450 dbSNP
rs1021010991 4451 dbSNP
rs1226659903 4456 dbSNP
rs1198822811 4474 dbSNP
rs1053826859 4482 dbSNP
rs1349962230 4486 dbSNP
rs1464489213 4494 dbSNP
rs1174317059 4499 dbSNP
rs1402807325 4500 dbSNP
rs1428928588 4501 dbSNP
rs1305921275 4502 dbSNP
rs1351980606 4510 dbSNP
rs1410004033 4511 dbSNP
rs1300005084 4514 dbSNP
rs1328782308 4517 dbSNP
rs1280097659 4518 dbSNP
rs936742860 4519 dbSNP
rs924003595 4524 dbSNP
rs1324939507 4525 dbSNP
rs1203498205 4534 dbSNP
rs1483514822 4546 dbSNP
rs989503543 4547 dbSNP
rs1441267169 4548 dbSNP
rs7759744 4550 dbSNP
rs1435041359 4557 dbSNP
rs1199647259 4574 dbSNP
rs7759597 4580 dbSNP
rs1002451885 4582 dbSNP
rs771931115 4593 dbSNP
rs1372114998 4596 dbSNP
rs991048310 4602 dbSNP
rs1025570438 4603 dbSNP
rs1388112464 4607 dbSNP
rs1159680615 4634 dbSNP
rs745693028 4635 dbSNP
rs1027145307 4639 dbSNP
rs1004355555 4654 dbSNP
rs140769992 4655 dbSNP
rs1047451660 4662 dbSNP
rs377192666 4664 dbSNP
rs7759453 4669 dbSNP
rs1015307238 4690 dbSNP
rs898828026 4693 dbSNP
rs1038967637 4695 dbSNP
rs943285063 4697 dbSNP
rs7759708 4704 dbSNP
rs911780799 4705 dbSNP
rs1263952070 4709 dbSNP
rs987726037 4710 dbSNP
rs1489571764 4721 dbSNP
rs774300725 4723 dbSNP
rs770825928 4732 dbSNP
rs1210542658 4735 dbSNP
rs1261069198 4739 dbSNP
rs945210026 4749 dbSNP
rs1391941715 4766 dbSNP
rs7759191 4797 dbSNP
rs1446521510 4800 dbSNP
rs1285016177 4802 dbSNP
rs1163777385 4804 dbSNP
rs1366391407 4806 dbSNP
rs1459082515 4808 dbSNP
rs1293623150 4809 dbSNP
rs1387198080 4810 dbSNP
rs893005626 4817 dbSNP
rs77457865 4818 dbSNP
rs1366531418 4823 dbSNP
rs7741238 4824 dbSNP
rs1342781023 4827 dbSNP
rs375036252 4828 dbSNP
rs1302483901 4830 dbSNP
rs190697564 4845 dbSNP
rs958062581 4865 dbSNP
rs1033681817 4874 dbSNP
rs778474003 4874 dbSNP
rs980733651 4878 dbSNP
rs1210656198 4881 dbSNP
rs1249870451 4885 dbSNP
rs1294994343 4886 dbSNP
rs777133953 4897 dbSNP
rs139030194 4898 dbSNP
rs949434094 4904 dbSNP
rs1253755037 4910 dbSNP
rs1425194814 4914 dbSNP
rs1165131066 4915 dbSNP
rs574738972 4917 dbSNP
rs1455235519 4921 dbSNP
rs1055414669 4925 dbSNP
rs1390063895 4948 dbSNP
rs1447883098 4956 dbSNP
rs553111564 4965 dbSNP
rs558888363 4969 dbSNP
rs920133336 4974 dbSNP
rs1288025001 4976 dbSNP
rs974652354 4977 dbSNP
rs1230350412 5005 dbSNP
rs961536826 5008 dbSNP
rs908305173 5024 dbSNP
rs538703367 5034 dbSNP
rs758722136 5039 dbSNP
rs1026055531 5048 dbSNP
rs1027937103 5054 dbSNP
rs994545133 5055 dbSNP
rs996758302 5058 dbSNP
rs1250668095 5059 dbSNP
rs1435730039 5060 dbSNP
rs898881914 5067 dbSNP
rs185442036 5069 dbSNP
rs1408003749 5071 dbSNP
rs1038685484 5073 dbSNP
rs750773073 5082 dbSNP
rs1007200549 5083 dbSNP
rs1466917637 5090 dbSNP
rs1475189840 5110 dbSNP
rs1307772600 5111 dbSNP
rs180839010 5117 dbSNP
rs999108186 5118 dbSNP
rs1218024559 5121 dbSNP
rs1051671947 5127 dbSNP
rs945234889 5129 dbSNP
rs1042890371 5131 dbSNP
rs1313855032 5137 dbSNP
rs1211371877 5157 dbSNP
rs1349818991 5161 dbSNP
rs1481877790 5162 dbSNP
rs1013665157 5164 dbSNP
rs913732720 5169 dbSNP
rs527455749 5172 dbSNP
rs1213672917 5185 dbSNP
rs1362203483 5190 dbSNP
rs78209536 5195 dbSNP
rs1477442889 5200 dbSNP
rs896524324 5204 dbSNP
rs1053576384 5206 dbSNP
rs936745545 5237 dbSNP
rs1455051455 5239 dbSNP
rs1445174464 5251 dbSNP
rs1369033795 5264 dbSNP
rs937958745 5293 dbSNP
rs1308930213 5295 dbSNP
rs926664007 5311 dbSNP
rs567929699 5318 dbSNP
rs970733903 5321 dbSNP
rs1295324544 5371 dbSNP
rs1435860047 5377 dbSNP
rs1038591758 5381 dbSNP
rs940205175 5382 dbSNP
rs1377691863 5384 dbSNP
rs908694988 5387 dbSNP
rs918192890 5394 dbSNP
rs983046419 5395 dbSNP
rs1273331579 5399 dbSNP
rs951672656 5404 dbSNP
rs548017627 5405 dbSNP
rs1218776862 5417 dbSNP
rs1469313357 5421 dbSNP
rs757742280 5421 dbSNP
rs1188410908 5423 dbSNP
rs955122421 5424 dbSNP
rs1451777185 5430 dbSNP
rs1168826032 5433 dbSNP
rs1188437644 5434 dbSNP
rs1413388252 5447 dbSNP
rs1403766996 5458 dbSNP
rs1167018252 5466 dbSNP
rs1319152080 5468 dbSNP
rs995600267 5484 dbSNP
rs73742557 5485 dbSNP
rs1434459561 5491 dbSNP
rs1017287356 5497 dbSNP
rs1362915088 5501 dbSNP
rs1256842805 5506 dbSNP
rs778648233 5510 dbSNP
rs1188637027 5511 dbSNP
rs370319508 5517 dbSNP
rs957006626 5518 dbSNP
rs1334984890 5527 dbSNP
rs1207531585 5531 dbSNP
rs890118124 5541 dbSNP
rs1246773715 5542 dbSNP
rs1052153270 5555 dbSNP
rs367932659 5556 dbSNP
rs1237206104 5561 dbSNP
rs1471936985 5562 dbSNP
rs1165289406 5566 dbSNP
rs967646616 5567 dbSNP
rs3799500 5574 dbSNP
rs1013717771 5586 dbSNP
rs1386398177 5591 dbSNP
rs1402320727 5599 dbSNP
rs1053630940 5611 dbSNP
rs896576856 5616 dbSNP
rs1445532871 5625 dbSNP
rs1294801916 5628 dbSNP
rs760846898 5629 dbSNP
rs370717094 5632 dbSNP
rs1265645668 5636 dbSNP
rs560723414 5639 dbSNP
rs1045142365 5640 dbSNP
rs1278532840 5652 dbSNP
rs1441107098 5654 dbSNP
rs1190022319 5678 dbSNP
rs1002221049 5693 dbSNP
rs1472363883 5702 dbSNP
rs898476048 5702 dbSNP
rs1414196093 5709 dbSNP
rs1471120997 5711 dbSNP
rs1369808299 5714 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 9753.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' agUGGUAACGAUUU---CACGUUAa 5'
            |:|  | :| ||   ||||||| 
Target 5' -aAUCUCUUUUCAAUCUGUGCAAUc 3'
1 - 24
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000361028.1 | 3UTR | GAAUCUCUUUUCAAUCUGUGCAAUCAACAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000361028.1 | 3UTR | AAUCUCUUUUCAAUCUGUGCAAUCAACAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28260 Renal cortex and medulla 0.595 1.6e-2 0.751 1.5e-3 13 Click to see details
GSE32688 Pancreatic cancer -0.262 7.4e-2 -0.310 4.2e-2 32 Click to see details
GSE17306 Multiple myeloma -0.208 7.6e-2 0.376 3.9e-3 49 Click to see details
GSE21687 Ependynoma primary tumors 0.135 1.4e-1 -0.142 1.3e-1 64 Click to see details
GSE19350 CNS germ cell tumors 0.317 1.6e-1 0.538 3.6e-2 12 Click to see details
GSE21849 B cell lymphoma 0.161 2.0e-1 0.147 2.2e-1 29 Click to see details
GSE17498 Multiple myeloma -0.109 2.5e-1 0.048 3.8e-1 40 Click to see details
GSE14794 Lymphoblastoid cells -0.068 2.6e-1 -0.060 2.9e-1 90 Click to see details
GSE42095 Differentiated embryonic stem cells 0.117 3.0e-1 0.174 2.1e-1 23 Click to see details
GSE38226 Liver fibrosis 0.103 3.3e-1 0.156 2.5e-1 21 Click to see details
GSE26953 Aortic valvular endothelial cells -0.091 3.4e-1 0.023 4.6e-1 24 Click to see details
GSE27834 Pluripotent stem cells -0.083 3.8e-1 -0.003 5.0e-1 16 Click to see details
GSE28544 Breast cancer 0.061 3.9e-1 0.041 4.2e-1 24 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.051 4.2e-1 -0.235 1.6e-1 20 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.051 4.2e-1 -0.235 1.6e-1 20 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
255 hsa-miR-367-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055315 DUSP5 dual specificity phosphatase 5 2 8
MIRT055791 PLEKHA1 pleckstrin homology domain containing A1 2 12
MIRT057114 DDIT4 DNA damage inducible transcript 4 2 4
MIRT059663 GATAD2B GATA zinc finger domain containing 2B 2 2
MIRT059926 ZDHHC5 zinc finger DHHC-type containing 5 2 2
MIRT061610 BTG2 BTG anti-proliferation factor 2 2 6
MIRT066478 HMGA2 high mobility group AT-hook 2 2 2
MIRT069388 ZFYVE21 zinc finger FYVE-type containing 21 2 2
MIRT069972 GEMIN2 gem nuclear organelle associated protein 2 2 2
MIRT074764 CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 2 2
MIRT076199 GID4 GID complex subunit 4 homolog 2 6
MIRT077512 UBE2Z ubiquitin conjugating enzyme E2 Z 2 4
MIRT077903 TOB1 transducer of ERBB2, 1 2 6
MIRT082250 MED29 mediator complex subunit 29 2 4
MIRT082434 CIC capicua transcriptional repressor 2 6
MIRT082474 PPP1R37 protein phosphatase 1 regulatory subunit 37 2 2
MIRT082778 ZNF264 zinc finger protein 264 2 2
MIRT084533 BCL2L11 BCL2 like 11 2 8
MIRT085309 UBXN4 UBX domain protein 4 2 8
MIRT086365 SSFA2 sperm specific antigen 2 2 8
MIRT087455 NF2 neurofibromin 2 2 2
MIRT088865 FOXN2 forkhead box N2 2 12
MIRT092185 ITPR1 inositol 1,4,5-trisphosphate receptor type 1 2 6
MIRT092326 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT093533 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 6
MIRT096935 PAPD7 poly(A) RNA polymerase D7, non-canonical 2 8
MIRT097026 MAP1B microtubule associated protein 1B 2 4
MIRT099137 MYLIP myosin regulatory light chain interacting protein 2 6
MIRT099905 SOX4 SRY-box 4 2 12
MIRT102289 DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 2 10
MIRT102507 KLHDC10 kelch domain containing 10 2 2
MIRT102891 INSIG1 insulin induced gene 1 2 2
MIRT109188 VMA21 VMA21, vacuolar ATPase assembly factor 2 4
MIRT124567 PRRC2B proline rich coiled-coil 2B 2 2
MIRT135568 SPRYD4 SPRY domain containing 4 2 2
MIRT161135 SLC25A36 solute carrier family 25 member 36 2 6
MIRT163995 KIAA1109 KIAA1109 2 4
MIRT164689 RNF4 ring finger protein 4 2 2
MIRT167705 HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 2 8
MIRT178956 USP28 ubiquitin specific peptidase 28 2 2
MIRT185717 ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 2 2
MIRT186264 TCEB3 elongin A 2 2
MIRT186537 TWF1 twinfilin actin binding protein 1 2 4
MIRT186628 COX20 COX20, cytochrome c oxidase assembly factor 2 8
MIRT189373 TXLNA taxilin alpha 2 4
MIRT197013 EIF1 eukaryotic translation initiation factor 1 2 10
MIRT206437 YIPF4 Yip1 domain family member 4 2 2
MIRT211228 FGF2 fibroblast growth factor 2 2 10
MIRT214529 C5ORF24 chromosome 5 open reading frame 24 2 2
MIRT216034 IL6ST interleukin 6 signal transducer 2 10
MIRT218084 TULP4 tubby like protein 4 2 2
MIRT242418 CCDC113 coiled-coil domain containing 113 2 2
MIRT243162 SOX11 SRY-box 11 2 2
MIRT250943 CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 2 4
MIRT253350 ZNF417 zinc finger protein 417 2 2
MIRT271968 ARF1 ADP ribosylation factor 1 2 2
MIRT273214 ZNF695 zinc finger protein 695 2 4
MIRT296114 SLC12A5 solute carrier family 12 member 5 2 2
MIRT301711 TEF TEF, PAR bZIP transcription factor 2 2
MIRT316477 ARID1B AT-rich interaction domain 1B 2 6
MIRT322174 CLN8 CLN8, transmembrane ER and ERGIC protein 2 4
MIRT341538 CNIH1 cornichon family AMPA receptor auxiliary protein 1 2 6
MIRT356062 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT443579 PPIC peptidylprolyl isomerase C 2 2
MIRT448825 FKBP1A FK506 binding protein 1A 2 4
MIRT451494 FOPNL FGFR1OP N-terminal like 2 2
MIRT452694 MDM2 MDM2 proto-oncogene 2 2
MIRT453167 CNOT4 CCR4-NOT transcription complex subunit 4 2 6
MIRT454588 SLC33A1 solute carrier family 33 member 1 2 4
MIRT455794 TAF8 TATA-box binding protein associated factor 8 2 4
MIRT456010 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456044 KIAA1586 KIAA1586 2 2
MIRT456763 TMEM239 transmembrane protein 239 2 4
MIRT458068 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT459230 MRPS21 mitochondrial ribosomal protein S21 2 2
MIRT459534 MFF mitochondrial fission factor 2 6
MIRT459759 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT460236 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT461104 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462924 ZNRF3 zinc and ring finger 3 2 2
MIRT463476 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463516 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT465503 TOR1B torsin family 1 member B 2 2
MIRT469525 RBFOX2 RNA binding protein, fox-1 homolog 2 2 8
MIRT470079 PTGES2 prostaglandin E synthase 2 2 2
MIRT471581 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT473451 MCOLN2 mucolipin 2 2 8
MIRT475882 H3F3C H3 histone family member 3C 2 10
MIRT475915 H3F3B H3 histone family member 3B 2 8
MIRT476195 GOLGA8A golgin A8 family member A 2 10
MIRT476318 GM2A GM2 ganglioside activator 2 2
MIRT476676 FUT11 fucosyltransferase 11 2 10
MIRT478368 DDI2 DNA damage inducible 1 homolog 2 2 2
MIRT479545 CDC5L cell division cycle 5 like 2 2
MIRT481024 BAZ2B bromodomain adjacent to zinc finger domain 2B 2 2
MIRT491009 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT493168 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT494345 CASKIN1 CASK interacting protein 1 2 2
MIRT499087 ZDHHC21 zinc finger DHHC-type containing 21 2 6
MIRT500029 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501298 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 4
MIRT503124 BCL11B B-cell CLL/lymphoma 11B 2 8
MIRT503301 GTF2A1 general transcription factor IIA subunit 1 2 6
MIRT504328 ASGR2 asialoglycoprotein receptor 2 2 6
MIRT504471 EID2B EP300 interacting inhibitor of differentiation 2B 2 2
MIRT504655 RPL9 ribosomal protein L9 2 6
MIRT505331 TMF1 TATA element modulatory factor 1 2 8
MIRT505732 SERTAD3 SERTA domain containing 3 2 4
MIRT505827 RSBN1 round spermatid basic protein 1 2 8
MIRT506004 PURG purine rich element binding protein G 2 8
MIRT506308 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 2 6
MIRT506806 KLHL15 kelch like family member 15 2 6
MIRT507119 GOLGA8B golgin A8 family member B 2 6
MIRT507353 FAM129A family with sequence similarity 129 member A 2 6
MIRT507591 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT507674 CPEB4 cytoplasmic polyadenylation element binding protein 4 2 4
MIRT507703 CNOT2 CCR4-NOT transcription complex subunit 2 2 8
MIRT508012 BCAT1 branched chain amino acid transaminase 1 2 4
MIRT510439 ZIC5 Zic family member 5 2 6
MIRT510539 XKR7 XK related 7 2 4
MIRT510600 TPPP tubulin polymerization promoting protein 2 6
MIRT511060 NRAS NRAS proto-oncogene, GTPase 2 4
MIRT511855 GOLGA8J golgin A8 family member J 2 6
MIRT511865 GOLGA8I golgin A8 family member I, pseudogene 1 3
MIRT512570 CTDSPL CTD small phosphatase like 2 2
MIRT512708 ZNF134 zinc finger protein 134 2 6
MIRT513177 MOAP1 modulator of apoptosis 1 2 6
MIRT513783 PAWR pro-apoptotic WT1 regulator 2 6
MIRT515099 IRGQ immunity related GTPase Q 2 2
MIRT515481 INCENP inner centromere protein 2 4
MIRT517416 BMP8A bone morphogenetic protein 8a 2 2
MIRT518754 C1orf35 chromosome 1 open reading frame 35 2 2
MIRT519780 ZNF354B zinc finger protein 354B 2 4
MIRT519865 ZFP62 ZFP62 zinc finger protein 2 6
MIRT520510 TRAM2 translocation associated membrane protein 2 2 6
MIRT521068 SLC25A32 solute carrier family 25 member 32 2 6
MIRT526912 ZNF772 zinc finger protein 772 2 6
MIRT527134 GULP1 GULP, engulfment adaptor PTB domain containing 1 2 2
MIRT527867 SLC39A14 solute carrier family 39 member 14 2 2
MIRT528404 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT532956 ZNF24 zinc finger protein 24 2 4
MIRT533021 ZFC3H1 zinc finger C3H1-type containing 2 4
MIRT533191 WASL Wiskott-Aldrich syndrome like 2 6
MIRT534191 SLC7A11 solute carrier family 7 member 11 2 2
MIRT534961 PTAR1 protein prenyltransferase alpha subunit repeat containing 1 2 4
MIRT536396 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT537046 GRAMD4 GRAM domain containing 4 2 2
MIRT537125 GOLGA3 golgin A3 2 4
MIRT537183 GFPT2 glutamine-fructose-6-phosphate transaminase 2 2 4
MIRT537652 ERGIC2 ERGIC and golgi 2 2 4
MIRT538632 CCSER2 coiled-coil serine rich protein 2 2 4
MIRT539231 ANP32E acidic nuclear phosphoprotein 32 family member E 2 6
MIRT540099 NPY4R neuropeptide Y receptor Y4 2 2
MIRT540998 ZNF460 zinc finger protein 460 2 4
MIRT541468 AURKA aurora kinase A 2 2
MIRT542680 SESN3 sestrin 3 2 2
MIRT542757 PRRG4 proline rich and Gla domain 4 2 2
MIRT542863 NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 2 2
MIRT542925 HOXC8 homeobox C8 2 2
MIRT543747 SZRD1 SUZ RNA binding domain containing 1 2 2
MIRT544404 ZSCAN12 zinc finger and SCAN domain containing 12 2 2
MIRT544583 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 4
MIRT544662 MED19 mediator complex subunit 19 2 2
MIRT545251 GTF2E1 general transcription factor IIE subunit 1 2 2
MIRT545261 TRIM36 tripartite motif containing 36 2 4
MIRT545744 UHRF1BP1 UHRF1 binding protein 1 2 2
MIRT545999 WDR81 WD repeat domain 81 2 2
MIRT546038 VPS4B vacuolar protein sorting 4 homolog B 2 2
MIRT547170 PDZD8 PDZ domain containing 8 2 2
MIRT547273 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT547729 KIF5B kinesin family member 5B 2 2
MIRT548127 GATA6 GATA binding protein 6 2 2
MIRT548203 FNIP1 folliculin interacting protein 1 2 2
MIRT548756 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT549641 ZNF75A zinc finger protein 75a 2 2
MIRT549684 ZNF598 zinc finger protein 598 2 2
MIRT550197 MRO maestro 2 2
MIRT550340 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT550536 MYZAP myocardial zonula adherens protein 2 2
MIRT550975 TOR4A torsin family 4 member A 2 2
MIRT551221 CIDEC cell death inducing DFFA like effector c 2 2
MIRT551355 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT551571 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT552277 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552661 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT553081 UCK2 uridine-cytidine kinase 2 2 2
MIRT553753 TBC1D8 TBC1 domain family member 8 2 2
MIRT554030 SPCS3 signal peptidase complex subunit 3 2 2
MIRT554099 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT554155 SLX4 SLX4 structure-specific endonuclease subunit 2 2
MIRT554815 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT555522 PMEPA1 prostate transmembrane protein, androgen induced 1 2 2
MIRT555597 PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma 2 2
MIRT555632 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 4
MIRT555679 PGAM4 phosphoglycerate mutase family member 4 2 4
MIRT555827 PAX9 paired box 9 2 2
MIRT555868 PAIP1 poly(A) binding protein interacting protein 1 2 2
MIRT555939 NUP43 nucleoporin 43 2 2
MIRT555994 NFYB nuclear transcription factor Y subunit beta 2 2
MIRT556340 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT556432 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT556585 LHFPL2 LHFPL tetraspan subfamily member 2 2 4
MIRT556801 KIAA1958 KIAA1958 2 2
MIRT558047 EXOC5 exocyst complex component 5 2 2
MIRT558697 CLTA clathrin light chain A 2 2
MIRT559191 BMPR1A bone morphogenetic protein receptor type 1A 2 4
MIRT559639 AKAP10 A-kinase anchoring protein 10 2 2
MIRT559707 AEN apoptosis enhancing nuclease 2 2
MIRT560673 SRFBP1 serum response factor binding protein 1 2 2
MIRT560990 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT562170 HOXA13 homeobox A13 2 2
MIRT562275 GNAQ G protein subunit alpha q 2 2
MIRT563624 ZNF277 zinc finger protein 277 2 2
MIRT563815 FMN1 formin 1 2 2
MIRT564096 TLR3 toll like receptor 3 2 2
MIRT565320 TMEM41A transmembrane protein 41A 2 2
MIRT565986 RNF44 ring finger protein 44 2 2
MIRT566047 REV3L REV3 like, DNA directed polymerase zeta catalytic subunit 2 2
MIRT568236 C11orf24 chromosome 11 open reading frame 24 2 2
MIRT568310 BAK1 BCL2 antagonist/killer 1 2 2
MIRT572376 ATOX1 antioxidant 1 copper chaperone 2 2
MIRT574822 CPEB3 cytoplasmic polyadenylation element binding protein 3 2 2
MIRT609212 PELP1 proline, glutamate and leucine rich protein 1 2 2
MIRT616217 RBM27 RNA binding motif protein 27 2 2
MIRT629087 FASLG Fas ligand 2 2
MIRT632124 FKBP9 FK506 binding protein 9 2 2
MIRT632576 POLQ DNA polymerase theta 2 2
MIRT634799 ENTHD1 ENTH domain containing 1 2 2
MIRT636553 ESRP1 epithelial splicing regulatory protein 1 2 2
MIRT640977 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT653875 SH2B3 SH2B adaptor protein 3 2 2
MIRT655598 OTUD7B OTU deubiquitinase 7B 2 2
MIRT659764 CCDC171 coiled-coil domain containing 171 2 2
MIRT660744 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT681037 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT682305 RBM28 RNA binding motif protein 28 2 2
MIRT682573 EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 2 2
MIRT686217 ZNF267 zinc finger protein 267 2 2
MIRT687209 PLXNA3 plexin A3 2 2
MIRT690630 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT692419 AGMAT agmatinase 2 2
MIRT694437 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT700725 PNO1 partner of NOB1 homolog 2 2
MIRT701549 NARF nuclear prelamin A recognition factor 2 2
MIRT704379 DAND5 DAN domain BMP antagonist family member 5 2 2
MIRT707935 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 2
MIRT709939 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT711371 MED7 mediator complex subunit 7 2 2
MIRT712327 PER2 period circadian clock 2 2 2
MIRT714515 SHE Src homology 2 domain containing E 2 2
MIRT715520 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT724294 OSMR oncostatin M receptor 2 2
MIRT725358 MUC21 mucin 21, cell surface associated 2 2
MIRT732242 KLF4 Kruppel like factor 4 3 1
MIRT735384 SPAG5 sperm associated antigen 5 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-367 Medpor NULL NULL Microarray osteoblast-like cells line (MG-63) 18408260 2008 up-regulated
miR-367 Activin A NULL 229455 Quantitative real-time PCR Human embryonic stem (hES) cells 19885849 2010 up-regulated
miR-367 Mistletoe lectin-I NULL NULL Microarray colorectal cancer cells CLY cells 20955366 2011 down-regulated
miR-367 Doxorubicin approved 31703 Quantitative real-time PCR heart 22859947 2012 up-regulated
miR-367 Paclitaxel approved 36314 Microarray Ovarian cancer cell lines 24220856 2014 up-regulated
miR-367 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-367 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Siop Treatment Protocol sensitive High Nephroblastoma tissue
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved resistant High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved sensitive High Hepatocellular Carcinoma tissue and cell line (HepG2)
hsa-miR-367-3p Mitoxantrone 4212 NSC279836 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Sorafenib 216239 NSC747971 approved sensitive Low Hepatocellular Carcinoma cell line (SKhep1, HA22T)
hsa-miR-367-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM16)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-367-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved resistant cell line (IGROV-1)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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