pre-miRNA Information
pre-miRNA hsa-mir-6818   
Genomic Coordinates chr22: 30007049 - 30007113
Description Homo sapiens miR-6818 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6818-5p
Sequence 6| UUGUGUGAGUACAGAGAGCAUC |27
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs763248242 2 dbSNP
rs186621048 3 dbSNP
rs1455267770 12 dbSNP
rs1170462641 19 dbSNP
rs1435853423 22 dbSNP
Putative Targets

Gene Information
Gene Symbol PLP1   
Synonyms GPM6C, HLD1, MMPL, PLP, PLP/DM20, PMD, SPG2
Description proteolipid protein 1
Transcript NM_000533   
Other Transcripts NM_001128834 , NM_199478   
Expression
Putative miRNA Targets on PLP1
3'UTR of PLP1
(miRNA target sites are highlighted)
>PLP1|NM_000533|3'UTR
   1 TCCCCCGTAGAAATCCCCCTTTCTCTAATAGCGAGGCTCTAACCACACAGCCTACAATGCTGCGTCTCCCATCTTAACTC
  81 TTTGCCTTTGCCACCAACTGGCCCTCTTCTTACTTGATGAGTGTAACAAGAAAGGAGAGTCTTGCAGTGATTAAGGTCTC
 161 TCTTTGGACTCTCCCCTCTTATGTACCTCTTTTAGTCATTTTGCTTCATAGCTGGTTCCTGCTAGAAATGGGAAATGCCT
 241 AAGAAGATGACTTCCCAACTGCAAGTCACAAAGGAATGGAGGCTCTAATTGAATTTTCAAGCATCTCCTGAGGATCAGAA
 321 AGTAATTTCTTCTCAAAGGGTACTTCCACTGATGGAAACAAAGTGGAAGGAAAGATGCTCAGGTACAGAGAAGGAATGTC
 401 TTTGGTCCTCTTGCCATCTATAGGGGCCAAATATATTCTCTTTGGTGTACAAAATGGAATTCATTCTGGTCTCTCTATTA
 481 CCACTGAAGATAGAAGAAAAAAGAATGTCAGAAAAACAATAAGAGCGTTTGCCCAAATCTGCCTATTGCAGCTGGGAGAA
 561 GGGGGTCAAAGCAAGGATCTTTCACCCACAGAAAGAGAGCACTGACCCCGATGGCGATGGACTACTGAAGCCCTAACTCA
 641 GCCAACCTTACTTACAGCATAAGGGAGCGTAGAATCTGTGTAGACGAAGGGGGCATCTGGCCTTACACCTCGTTAGGGAA
 721 GAGAAACAGGGTGTTGTCAGCATCTTCTCACTCCCTTCTCCTTGATAACAGCTACCATGACAACCCTGTGGTTTCCAAGG
 801 AGCTGAGAATAGAAGGAAACTAGCTTACATGAGAACAGACTGGCCTGAGGAGCAGCAGTTGCTGGTGGCTAATGGTGTAA
 881 CCTGAGATGGCCCTCTGGTAGACACAGGATAGATAACTCTTTGGATAGCATGTCTTTTTTTCTGTTAATTAGTTGTGTAC
 961 TCTGGCCTCTGTCATATCTTCACAATGGTGCTCATTTCATGGGGTATTATCCATTCAGTCATCGTAGGTGATTTGAAGGT
1041 CTTGATTTGTTTTAGAATGATGCACATTTCATGTATTCCAGTTTGTTTATTACTTATTTGGGGTTGCATCAGAAATGTCT
1121 GGAGAATAATTCTTTGATTATGACTGTTTTTTAAACTAGGAAAATTGGACATTAAGCATCACAAATGATATTAAAAATTG
1201 GCTAGTTGAATCTATTGGGATTTTCTACAAGTATTCTGCCTTTGCAGAAACAGATTTGGTGAATTTGAATCTCAATTTGA
1281 GTAATCTGATCGTTCTTTCTAGCTAATGGAAAATGATTTTACTTAGCAATGTTATCTTGGTGTGTTAAGAGTTAGGTTTA
1361 ACATAAAGGTTATTTTCTCCTGATATAGATCACATAACAGAATGCACCAGTCATCAGCTATTCAGTTGGTAAGCTTCCAG
1441 GAAAAAGGACAGGCAGAAAGAGTTTGAGACCTGAATAGCTCCCAGATTTCAGTCTTTTCCTGTTTTTGTTAACTTTGGGT
1521 TAAAAAAAAAAAAAGTCTGATTGGTTTTAATTGAAGGAAAGATTTGTACTACAGTTCTTTTGTTGTAAAGAGTTGTGTTG
1601 TTCTTTTCCCCCAAAGTGGTTTCAGCAATATTTAAGGAGATGTAAGAGCTTTACAAAAAGACACTTGATACTTGTTTTCA
1681 AACCAGTATACAAGATAAGCTTCCAGGCTGCATAGAAGGAGGAGAGGGAAAATGTTTTGTAAGAAACCAATCAAGATAAA
1761 GGACAGTGAAGTAATCCGTACCTTGTGTTTTGTTTTGATTTAATAACATAACAAATAACCAACCCTTCCCTGAAAACCTC
1841 ACATGCATACATACACATATATACACACACAAAGAGAGTTAATCAACTGAAAGTGTTTCCTTCATTTCTGATATAGAATT
1921 GCAATTTTAACACACATAAAGGATAAACTTTTAGAAACTTATCTTACAAAGTGTATTTTATAAAATTAAAGAAAATAAAA
2001 TTAAGAATGTTCTCAATCAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cuACGAGA-GAC-AUG---AGUGUGUu 5'
            | :||| ||| ||:   |||||:| 
Target 5' taTTTTCTCCTGATATAGATCACATAa 3'
1371 - 1397 140.00 -13.00
2
miRNA  3' cuACGAG-AGACAUGAGUGUGUu 5'
            | | | | | ||| |||||| 
Target 5' caTACACATATATACACACACAa 3'
1850 - 1872 128.00 -10.00
3
miRNA  3' cuacGAGAGACAU---GAGUGUGUu 5'
              :|| ||| |   ||||||:: 
Target 5' acccTTCCCTGAAAACCTCACATGc 3'
1822 - 1846 126.00 -9.70
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs761012212 3 dbSNP
rs766855339 6 dbSNP
rs367845254 7 dbSNP
rs758148748 8 dbSNP
rs911160903 14 dbSNP
rs777530817 27 dbSNP
rs1260717238 30 dbSNP
rs957192509 32 dbSNP
rs371857048 34 dbSNP
rs1228408668 36 dbSNP
rs185953263 38 dbSNP
rs1347847218 45 dbSNP
rs1489712699 46 dbSNP
rs190366376 48 dbSNP
rs1247629014 49 dbSNP
rs1272838998 59 dbSNP
rs1019286371 64 dbSNP
rs763454675 65 dbSNP
rs770718948 66 dbSNP
rs1250052187 70 dbSNP
rs927950318 79 dbSNP
rs971928100 80 dbSNP
rs918999295 94 dbSNP
rs939389339 95 dbSNP
rs149109043 103 dbSNP
rs1462381026 111 dbSNP
rs760227141 115 dbSNP
rs984436972 122 dbSNP
rs181312516 138 dbSNP
rs948402690 141 dbSNP
rs1425244989 148 dbSNP
rs1045945132 161 dbSNP
rs1186769720 162 dbSNP
rs1186736398 176 dbSNP
rs749958994 177 dbSNP
rs934822443 183 dbSNP
rs1198085906 187 dbSNP
rs1481244699 188 dbSNP
rs1251164139 189 dbSNP
rs1053245384 194 dbSNP
rs753479760 198 dbSNP
rs1353807966 218 dbSNP
rs757696907 231 dbSNP
rs1029458561 239 dbSNP
rs1330899755 241 dbSNP
rs1391959560 244 dbSNP
rs1395664788 249 dbSNP
rs1296283659 250 dbSNP
rs955014716 253 dbSNP
rs1418250545 268 dbSNP
rs1163783638 282 dbSNP
rs374324001 283 dbSNP
rs760300085 286 dbSNP
rs1181892746 290 dbSNP
rs1420257277 303 dbSNP
rs889757661 305 dbSNP
rs1380165245 306 dbSNP
rs957533920 309 dbSNP
rs750987027 310 dbSNP
rs1018858374 318 dbSNP
rs144929833 323 dbSNP
rs1281402201 330 dbSNP
rs1239829155 340 dbSNP
rs993317811 352 dbSNP
rs1026175673 360 dbSNP
rs780609276 366 dbSNP
rs1394952207 375 dbSNP
rs1042440 377 dbSNP
rs1042442 379 dbSNP
rs1324971989 380 dbSNP
rs747120430 395 dbSNP
rs768728281 398 dbSNP
rs984527039 405 dbSNP
rs1158684162 407 dbSNP
rs781398260 416 dbSNP
rs1452469252 426 dbSNP
rs771223706 444 dbSNP
rs1210622705 446 dbSNP
rs1455911401 448 dbSNP
rs1254092700 462 dbSNP
rs540831827 472 dbSNP
rs928061378 483 dbSNP
rs41310685 487 dbSNP
rs991248231 497 dbSNP
rs916810799 504 dbSNP
rs1184218396 508 dbSNP
rs1418124682 510 dbSNP
rs981549278 520 dbSNP
rs1428643427 527 dbSNP
rs928877617 528 dbSNP
rs1038640612 532 dbSNP
rs1327939285 535 dbSNP
rs934940101 544 dbSNP
rs1399697931 566 dbSNP
rs11543012 568 dbSNP
rs1174969001 572 dbSNP
rs1050796177 582 dbSNP
rs1396185149 584 dbSNP
rs1173446918 586 dbSNP
rs1477260576 589 dbSNP
rs1244141138 598 dbSNP
rs1194178151 607 dbSNP
rs1446636906 608 dbSNP
rs1261201882 611 dbSNP
rs1313274449 616 dbSNP
rs914715228 617 dbSNP
rs186270804 628 dbSNP
rs11543013 640 dbSNP
rs1231930783 645 dbSNP
rs759342687 646 dbSNP
rs1268691086 648 dbSNP
rs759150631 659 dbSNP
rs1270487405 661 dbSNP
rs771968665 667 dbSNP
rs890880195 668 dbSNP
rs1314223857 670 dbSNP
rs947566505 680 dbSNP
rs1361345812 684 dbSNP
rs1229317778 685 dbSNP
rs1312825453 685 dbSNP
rs775484528 686 dbSNP
rs796641925 687 dbSNP
rs889906270 692 dbSNP
rs944043834 693 dbSNP
rs1041470143 694 dbSNP
rs760115722 697 dbSNP
rs901742472 700 dbSNP
rs191185689 702 dbSNP
rs753571902 712 dbSNP
rs1256826642 713 dbSNP
rs1018369609 728 dbSNP
rs1439486755 732 dbSNP
rs1273518138 735 dbSNP
rs1026247442 756 dbSNP
rs1315720318 757 dbSNP
rs1294774983 781 dbSNP
rs1011890080 787 dbSNP
rs1354279064 791 dbSNP
rs1020238861 798 dbSNP
rs967150849 804 dbSNP
rs2858188 809 dbSNP
rs1446540818 812 dbSNP
rs761505460 820 dbSNP
rs35260663 839 dbSNP
rs981244014 854 dbSNP
rs1035045634 857 dbSNP
rs1042460 862 dbSNP
rs1398496109 870 dbSNP
rs1167390850 878 dbSNP
rs960791819 892 dbSNP
rs990951248 893 dbSNP
rs1006508036 902 dbSNP
rs1180177385 913 dbSNP
rs1471146619 919 dbSNP
rs1213179428 935 dbSNP
rs916551558 935 dbSNP
rs11543015 936 dbSNP
rs1203681938 945 dbSNP
rs1022705866 952 dbSNP
rs1456291233 955 dbSNP
rs1241214267 962 dbSNP
rs1274750133 966 dbSNP
rs1485904375 968 dbSNP
rs1189941774 977 dbSNP
rs1333694608 980 dbSNP
rs200245329 1000 dbSNP
rs398087861 1001 dbSNP
rs796941012 1001 dbSNP
rs1310021950 1002 dbSNP
rs1224939482 1010 dbSNP
rs1426967877 1024 dbSNP
rs941412098 1025 dbSNP
rs974724467 1039 dbSNP
rs918848759 1066 dbSNP
rs1328338348 1068 dbSNP
rs970241016 1087 dbSNP
rs1393992278 1089 dbSNP
rs1162813997 1090 dbSNP
rs1316492007 1109 dbSNP
rs981112847 1119 dbSNP
rs368210188 1123 dbSNP
rs752618487 1128 dbSNP
rs955721409 1137 dbSNP
rs1344836976 1139 dbSNP
rs988990154 1142 dbSNP
rs1435831544 1147 dbSNP
rs371716915 1162 dbSNP
rs914826418 1165 dbSNP
rs1322673200 1175 dbSNP
rs1254725528 1180 dbSNP
rs1051282274 1192 dbSNP
rs1369378959 1200 dbSNP
rs1263344967 1204 dbSNP
rs947574969 1215 dbSNP
rs890848985 1228 dbSNP
rs1317004722 1232 dbSNP
rs942429475 1238 dbSNP
rs1240143836 1243 dbSNP
rs1352128462 1259 dbSNP
rs1306148722 1270 dbSNP
rs758427521 1276 dbSNP
rs1367290110 1282 dbSNP
rs911293915 1292 dbSNP
rs182606431 1293 dbSNP
rs758780517 1294 dbSNP
rs1041152883 1307 dbSNP
rs1283031984 1316 dbSNP
rs897128880 1327 dbSNP
rs766812456 1330 dbSNP
rs140319649 1333 dbSNP
rs1804188 1334 dbSNP
rs1047677217 1336 dbSNP
rs777974518 1338 dbSNP
rs887728502 1339 dbSNP
rs1199476919 1341 dbSNP
rs1485988902 1342 dbSNP
rs1241072588 1347 dbSNP
rs1035476194 1354 dbSNP
rs958558030 1357 dbSNP
rs1283124708 1365 dbSNP
rs1235590736 1373 dbSNP
rs1248454370 1383 dbSNP
rs1311985037 1392 dbSNP
rs1012745193 1395 dbSNP
rs747122836 1398 dbSNP
rs1023757691 1399 dbSNP
rs1398265491 1408 dbSNP
rs1023243745 1413 dbSNP
rs771270983 1418 dbSNP
rs781532754 1420 dbSNP
rs1313423504 1430 dbSNP
rs1465427024 1438 dbSNP
rs1375788054 1442 dbSNP
rs1343920786 1444 dbSNP
rs974101116 1445 dbSNP
rs145466107 1463 dbSNP
rs112538496 1472 dbSNP
rs1161703670 1475 dbSNP
rs187691381 1479 dbSNP
rs1257532075 1492 dbSNP
rs1212229647 1493 dbSNP
rs1483204776 1499 dbSNP
rs987078927 1509 dbSNP
rs1207032029 1514 dbSNP
rs1308411985 1522 dbSNP
rs760793414 1522 dbSNP
rs879168963 1522 dbSNP
rs1357451827 1523 dbSNP
rs912715838 1535 dbSNP
rs955667870 1537 dbSNP
rs1399950047 1551 dbSNP
rs1299705323 1558 dbSNP
rs781201175 1582 dbSNP
rs1440332615 1586 dbSNP
rs988473863 1604 dbSNP
rs1399214444 1630 dbSNP
rs1021822091 1631 dbSNP
rs1475944166 1640 dbSNP
rs1418028799 1641 dbSNP
rs1186582130 1663 dbSNP
rs1423788832 1671 dbSNP
rs748205356 1686 dbSNP
rs191117731 1690 dbSNP
rs1198026640 1713 dbSNP
rs1481172784 1717 dbSNP
rs1333333055 1726 dbSNP
rs1472273188 1739 dbSNP
rs1257749847 1741 dbSNP
rs183259017 1751 dbSNP
rs1039852999 1759 dbSNP
rs1273943955 1768 dbSNP
rs1350684242 1778 dbSNP
rs1338735410 1798 dbSNP
rs1229815541 1803 dbSNP
rs1391835653 1809 dbSNP
rs1270934680 1819 dbSNP
rs745708306 1826 dbSNP
rs911356581 1855 dbSNP
rs1329036064 1857 dbSNP
rs965587945 1857 dbSNP
rs1462740326 1860 dbSNP
rs976798650 1865 dbSNP
rs1162241698 1890 dbSNP
rs914331220 1897 dbSNP
rs1364970805 1900 dbSNP
rs1291866604 1905 dbSNP
rs918676952 1921 dbSNP
rs1436032689 1932 dbSNP
rs1184609809 1937 dbSNP
rs1440842755 1942 dbSNP
rs929954043 1953 dbSNP
rs771842340 1956 dbSNP
rs1180780033 1968 dbSNP
rs1252237009 1983 dbSNP
rs41306283 1986 dbSNP
rs909113395 1987 dbSNP
rs1253899177 1989 dbSNP
rs1041379403 1994 dbSNP
rs1354349375 2013 dbSNP
rs775748581 2019 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 5354.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' cuacgagagACAUGAGUGUGUu 5'
                   | ||: |||||| 
Target 5' acauacacaUAUAUACACACA- 3'
2 - 22
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000303958.2 | 3UTR | CAUACAUACACAUAUAUACACACACA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000303958.2 | 3UTR | UACAUACACAUAUAUACACACA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
140 hsa-miR-6818-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT071796 RNF11 ring finger protein 11 2 2
MIRT077120 NKIRAS2 NFKB inhibitor interacting Ras like 2 2 4
MIRT079951 RNF138 ring finger protein 138 2 2
MIRT102968 EN2 engrailed homeobox 2 2 4
MIRT115694 MGRN1 mahogunin ring finger 1 2 2
MIRT121074 FGFRL1 fibroblast growth factor receptor like 1 2 2
MIRT143171 GLYR1 glyoxylate reductase 1 homolog 2 2
MIRT145635 LASP1 LIM and SH3 protein 1 2 2
MIRT282026 ARID3B AT-rich interaction domain 3B 2 6
MIRT301684 EP300 E1A binding protein p300 2 2
MIRT328627 AKIRIN1 akirin 1 2 2
MIRT340977 IPO5 importin 5 2 2
MIRT371401 STC2 stanniocalcin 2 2 2
MIRT378008 TMED7 transmembrane p24 trafficking protein 7 2 4
MIRT445185 CCDC88C coiled-coil domain containing 88C 2 2
MIRT447120 DUSP16 dual specificity phosphatase 16 2 2
MIRT449153 SORCS2 sortilin related VPS10 domain containing receptor 2 2 2
MIRT450200 ABHD15 abhydrolase domain containing 15 2 2
MIRT453853 ZNF12 zinc finger protein 12 2 2
MIRT459077 LSM1 LSM1 homolog, mRNA degradation associated 2 2
MIRT461304 MRPS27 mitochondrial ribosomal protein S27 2 2
MIRT464137 VPS28 VPS28, ESCRT-I subunit 2 2
MIRT468114 SH3PXD2A SH3 and PX domains 2A 2 2
MIRT471401 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT478220 DDX52 DExD-box helicase 52 2 2
MIRT479695 CCNT1 cyclin T1 2 2
MIRT479779 CCND1 cyclin D1 2 2
MIRT484980 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 8
MIRT485016 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 8
MIRT485034 TMEM189 transmembrane protein 189 2 8
MIRT485221 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT490143 TERF2IP TERF2 interacting protein 2 6
MIRT508908 DOK6 docking protein 6 2 6
MIRT513877 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 4
MIRT515966 C9orf156 tRNA methyltransferase O 2 4
MIRT517892 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT518660 CLVS2 clavesin 2 2 4
MIRT520027 YOD1 YOD1 deubiquitinase 2 6
MIRT523884 EPHA5 EPH receptor A5 2 4
MIRT529237 PORCN porcupine O-acyltransferase 2 2
MIRT535337 PFN1 profilin 1 2 2
MIRT537532 EZR ezrin 2 2
MIRT537695 ELOVL6 ELOVL fatty acid elongase 6 2 2
MIRT538494 CLOCK clock circadian regulator 2 2
MIRT539140 ARHGAP35 Rho GTPase activating protein 35 2 2
MIRT541380 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT545018 PLP1 proteolipid protein 1 2 2
MIRT547732 KIF23 kinesin family member 23 2 4
MIRT548257 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT550372 MYLK3 myosin light chain kinase 3 2 2
MIRT551867 TMEM47 transmembrane protein 47 2 2
MIRT552289 SNAP29 synaptosome associated protein 29 2 2
MIRT552902 VSNL1 visinin like 1 2 8
MIRT552990 VAMP4 vesicle associated membrane protein 4 2 4
MIRT554729 RHOC ras homolog family member C 2 2
MIRT555301 PPP3CB protein phosphatase 3 catalytic subunit beta 2 2
MIRT556832 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT557523 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT558238 EDA2R ectodysplasin A2 receptor 2 2
MIRT558920 CBX1 chromobox 1 2 2
MIRT559198 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT559611 AMER1 APC membrane recruitment protein 1 2 2
MIRT559769 URGCP-MRPS24 URGCP-MRPS24 readthrough 2 4
MIRT564648 ZNF487P zinc finger protein 487 1 1
MIRT565856 NHS NHS actin remodeling regulator 2 2
MIRT569044 ZNF655 zinc finger protein 655 2 2
MIRT569154 SIGMAR1 sigma non-opioid intracellular receptor 1 2 2
MIRT569166 DMD dystrophin 2 2
MIRT569205 CASZ1 castor zinc finger 1 2 2
MIRT569264 BRWD3 bromodomain and WD repeat domain containing 3 2 2
MIRT569431 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT569476 CTSE cathepsin E 2 2
MIRT570232 NCAN neurocan 2 2
MIRT570519 SHH sonic hedgehog 2 2
MIRT570680 FZD5 frizzled class receptor 5 2 2
MIRT572161 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT575142 Cd93 CD93 antigen 2 3
MIRT575644 Mitf microphthalmia-associated transcription factor 2 3
MIRT575653 Synpo synaptopodin 2 4
MIRT576375 Runx1t1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 2 2
MIRT576388 Fhl2 four and a half LIM domains 2 2 3
MIRT576413 Pla2g16 phospholipase A2, group XVI 2 2
MIRT576697 Hps3 HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 2 3
MIRT606872 CHST11 carbohydrate sulfotransferase 11 2 4
MIRT606940 GFRA1 GDNF family receptor alpha 1 2 6
MIRT607025 ZEB1 zinc finger E-box binding homeobox 1 2 2
MIRT607028 PPY pancreatic polypeptide 2 4
MIRT607081 MITF melanogenesis associated transcription factor 2 3
MIRT607769 HS6ST3 heparan sulfate 6-O-sulfotransferase 3 2 6
MIRT607881 SATB1 SATB homeobox 1 2 2
MIRT607996 BTBD9 BTB domain containing 9 2 2
MIRT608124 TSC22D2 TSC22 domain family member 2 2 2
MIRT608132 TGFBR2 transforming growth factor beta receptor 2 2 2
MIRT608209 ADAT2 adenosine deaminase, tRNA specific 2 2 2
MIRT608337 SPN sialophorin 2 2
MIRT608416 SYNPO synaptopodin 2 5
MIRT608459 CD93 CD93 molecule 2 3
MIRT608555 SBK1 SH3 domain binding kinase 1 2 6
MIRT608585 PPP2R1B protein phosphatase 2 scaffold subunit Abeta 2 4
MIRT608785 JAKMIP2 janus kinase and microtubule interacting protein 2 2 4
MIRT608791 CDH12 cadherin 12 2 2
MIRT608816 ONECUT3 one cut homeobox 3 2 6
MIRT608876 CNTF ciliary neurotrophic factor 2 6
MIRT608881 CLIC6 chloride intracellular channel 6 2 2
MIRT608894 ZNF860 zinc finger protein 860 2 2
MIRT608954 GIMAP1 GTPase, IMAP family member 1 2 4
MIRT609007 HPS3 HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 2 3
MIRT609045 INVS inversin 2 4
MIRT619037 CASS4 Cas scaffolding protein family member 4 2 2
MIRT625226 RPSAP58 ribosomal protein SA pseudogene 58 2 4
MIRT625545 GABRB2 gamma-aminobutyric acid type A receptor beta2 subunit 2 2
MIRT627333 TTLL7 tubulin tyrosine ligase like 7 2 2
MIRT627954 NLK nemo like kinase 2 2
MIRT629280 UNC13A unc-13 homolog A 2 2
MIRT634982 TNFAIP8 TNF alpha induced protein 8 2 2
MIRT646129 C1orf147 chromosome 1 open reading frame 147 2 2
MIRT646370 SLC22A6 solute carrier family 22 member 6 2 2
MIRT652743 TGFA transforming growth factor alpha 2 4
MIRT653984 SEMA6A semaphorin 6A 2 2
MIRT660038 C15orf61 chromosome 15 open reading frame 61 2 2
MIRT663504 NKAPL NFKB activating protein like 2 4
MIRT667117 OCIAD2 OCIA domain containing 2 2 2
MIRT683747 C3orf36 chromosome 3 open reading frame 36 2 2
MIRT683922 SLC43A3 solute carrier family 43 member 3 2 2
MIRT684101 LHFP LHFPL tetraspan subfamily member 6 2 2
MIRT684224 FGF14 fibroblast growth factor 14 2 2
MIRT685560 SRD5A3 steroid 5 alpha-reductase 3 2 2
MIRT687408 NRXN1 neurexin 1 2 2
MIRT687467 NHSL2 NHS like 2 2 2
MIRT687695 LEPREL1 prolyl 3-hydroxylase 2 1 1
MIRT688094 GLRA3 glycine receptor alpha 3 2 2
MIRT688255 FHL2 four and a half LIM domains 2 2 3
MIRT688851 CAMKK2 calcium/calmodulin dependent protein kinase kinase 2 2 2
MIRT700293 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT704679 CHST2 carbohydrate sulfotransferase 2 2 2
MIRT706392 PPID peptidylprolyl isomerase D 2 2
MIRT707388 SLC35F6 solute carrier family 35 member F6 2 2
MIRT707509 PPP1R16B protein phosphatase 1 regulatory subunit 16B 2 2
MIRT709808 AR androgen receptor 2 2
MIRT715491 MAZ MYC associated zinc finger protein 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6818-5p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-6818-5p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-6818-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

Error report submission