pre-miRNA Information
pre-miRNA hsa-mir-4524a   
Genomic Coordinates chr17: 69099564 - 69099632
Description Homo sapiens miR-4524a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4524a-5p
Sequence 6| AUAGCAGCAUGAACCUGUCUCA |27
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1322445998 8 dbSNP
rs1350790266 13 dbSNP
rs1263495678 21 dbSNP
Putative Targets

Gene Information
Gene Symbol RSL24D1   
Synonyms C15orf15, HRP-L30-iso, L30, RLP24, RPL24, RPL24L, TVAS3
Description ribosomal L24 domain containing 1
Transcript NM_016304   
Expression
Putative miRNA Targets on RSL24D1
3'UTR of RSL24D1
(miRNA target sites are highlighted)
>RSL24D1|NM_016304|3'UTR
   1 AAATCTCTGTAACCATTTCTTTTATGTACATTTGAAAATGCCCTTTGGATACTTGGAACTGCTAAATTATTTTATTTTTT
  81 ACATAAGGTCACTTAAATGAAAAGCGATTAAAAGACATCTTTCCTGCATTGCCATCTACATAATATCAGATATTACGGAT
 161 GTTAGATTGCATCTCAGTGTTAAATCTTTACTGATAGATGTACTTAAGTAAATCATGAAAATTCTACTTGTAACTATAGA
 241 AGTGAATTGTGGACGTAAAATGGTTGTGCTATTTGGATAATGGCACTAGGCAGCATTTGTATAGTAACTAATGGCAAAAA
 321 TTCATGGCTAGTGATGTATAAAATAAAATATTCTTTGCAGTAAAATATTCCCTTTGTTAATGTTATAGAAGGGGGGATAC
 401 AAAAAGGAACTAACAATTTGTATGGCAGTGTCAGATATTTTTATTTTAGTATTTCCTGTTTTGGTTTATTTGCATCTTAG
 481 AAGAGCATAATGACATTGTTTGATGAAGCCTAATTATGCTGGACTGTTTTGACCTGGTTTAACCCTTCTGATAGGTAGTT
 561 GTGGATGCTGGGGATGAGAACTGAATAATCTTTGCCTGGAGTGACACTACACTCTAGAATTTCCACTTTGGAGAATACTC
 641 AGTTCCAACTTGTGATTCCTGATAGAACAGACTTTACTTTTCTAGCCCAGCATTGATCTAGAAGCAGAGGAATCCCAGCG
 721 CCTTTTAAAAGTTGTTATGTGGTTTTCTTTTAAAAAGCTCCTGTTTTTGGAAAGTAGAATTTATGGGTACAACGTATGTT
 801 CATTATTTGTACATAAAATAAAACCATTTAAAAAGTAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acucuguccaaguacGACGAUa 5'
                         |||||| 
Target 5' tttggatacttggaaCTGCTAa 3'
44 - 65 120.00 -6.80
2
miRNA  3' acuCUGUCCA--AGUA-CGACGAUa 5'
             ||:||||  |::| | ||||: 
Target 5' tctGATAGGTAGTTGTGGATGCTGg 3'
547 - 571 117.00 -12.80
3
miRNA  3' acucuguccAAG--UACGACGAUa 5'
                   ||:  | |:||:|| 
Target 5' ccagcgcctTTTAAAAGTTGTTAt 3'
715 - 738 111.00 -5.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30109259 6 COSMIC
COSN32052570 7 COSMIC
COSN31482325 24 COSMIC
COSN30478742 41 COSMIC
COSN30188499 47 COSMIC
COSN26581725 50 COSMIC
COSN31535528 106 COSMIC
COSN30511910 121 COSMIC
COSN17385604 156 COSMIC
COSN15663047 177 COSMIC
COSN30530613 236 COSMIC
COSN7048936 291 COSMIC
COSN23680773 303 COSMIC
COSN15269527 326 COSMIC
COSN20112099 419 COSMIC
COSN7048935 550 COSMIC
COSN29294954 693 COSMIC
COSN31527968 777 COSMIC
COSN31569995 799 COSMIC
COSN14929764 917 COSMIC
COSN27405417 925 COSMIC
COSN28201543 967 COSMIC
COSN5398931 993 COSMIC
COSN27732947 1056 COSMIC
COSN27726966 1064 COSMIC
COSN18992631 1112 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1279597525 2 dbSNP
rs748962587 4 dbSNP
rs563585818 5 dbSNP
rs1442198666 15 dbSNP
rs770225609 19 dbSNP
rs1238512841 21 dbSNP
rs1188099619 22 dbSNP
rs1441333022 23 dbSNP
rs765521773 24 dbSNP
rs748501964 28 dbSNP
rs781596166 29 dbSNP
rs755494238 30 dbSNP
rs369626781 41 dbSNP
rs780107982 42 dbSNP
rs11540373 44 dbSNP
rs1285313670 47 dbSNP
rs1450888759 49 dbSNP
rs1167067902 52 dbSNP
rs1353234690 54 dbSNP
rs1164662923 58 dbSNP
rs1461883986 71 dbSNP
rs11540369 74 dbSNP
rs1332655312 75 dbSNP
rs1402834968 79 dbSNP
rs143479241 80 dbSNP
rs1459592781 81 dbSNP
rs906169033 83 dbSNP
rs1312454222 85 dbSNP
rs1378063850 86 dbSNP
rs1228369949 91 dbSNP
rs780702890 103 dbSNP
rs1473524745 104 dbSNP
rs562019218 105 dbSNP
rs1046198430 106 dbSNP
rs1458923349 109 dbSNP
rs1201597898 110 dbSNP
rs1242737098 111 dbSNP
rs1483725432 112 dbSNP
rs1183847167 114 dbSNP
rs1179700753 121 dbSNP
rs1417403490 123 dbSNP
rs1428008685 124 dbSNP
rs564276797 131 dbSNP
rs1426489365 133 dbSNP
rs879237383 136 dbSNP
rs1268202608 138 dbSNP
rs753779637 140 dbSNP
rs1333046216 156 dbSNP
rs11540399 157 dbSNP
rs900316356 161 dbSNP
rs1229406387 173 dbSNP
rs1304244034 176 dbSNP
rs914065861 178 dbSNP
rs1053991080 183 dbSNP
rs1278750340 184 dbSNP
rs891509592 187 dbSNP
rs1221435079 194 dbSNP
rs1278330787 199 dbSNP
rs1312578212 200 dbSNP
rs1212438058 203 dbSNP
rs1053282233 206 dbSNP
rs938336121 214 dbSNP
rs1194545051 216 dbSNP
rs1265942968 224 dbSNP
rs936834385 226 dbSNP
rs1426245926 227 dbSNP
rs906908306 246 dbSNP
rs1177791075 248 dbSNP
rs573369853 254 dbSNP
rs986335100 255 dbSNP
rs1298323876 267 dbSNP
rs560014253 268 dbSNP
rs1402972356 271 dbSNP
rs1438258406 272 dbSNP
rs1393350837 282 dbSNP
rs923232927 284 dbSNP
rs755601961 285 dbSNP
rs1220803056 290 dbSNP
rs1282404192 291 dbSNP
rs1353317253 292 dbSNP
rs1217387748 293 dbSNP
rs972564753 303 dbSNP
rs949012320 309 dbSNP
rs1198697813 315 dbSNP
rs546361213 323 dbSNP
rs920086404 324 dbSNP
rs962184498 330 dbSNP
rs372593488 331 dbSNP
rs188072191 351 dbSNP
rs1418678386 353 dbSNP
rs940188680 357 dbSNP
rs1361829619 358 dbSNP
rs1422216733 360 dbSNP
rs557656206 361 dbSNP
rs987305150 367 dbSNP
rs1016757425 375 dbSNP
rs1277595013 376 dbSNP
rs537299909 385 dbSNP
rs952510820 386 dbSNP
rs749970447 387 dbSNP
rs1002098223 391 dbSNP
rs906201655 392 dbSNP
rs1209377354 397 dbSNP
rs964655203 409 dbSNP
rs113590943 411 dbSNP
rs77159420 413 dbSNP
rs1009639621 414 dbSNP
rs1011369805 416 dbSNP
rs1237905595 420 dbSNP
rs891640907 422 dbSNP
rs149922510 425 dbSNP
rs374388938 425 dbSNP
rs752586585 425 dbSNP
rs1381850588 426 dbSNP
rs554134944 427 dbSNP
rs1442222515 428 dbSNP
rs534459425 432 dbSNP
rs1406976615 439 dbSNP
rs1326795404 448 dbSNP
rs767214974 455 dbSNP
rs551988519 456 dbSNP
rs1333604085 457 dbSNP
rs889256405 474 dbSNP
rs948398677 480 dbSNP
rs183469646 486 dbSNP
rs1297907166 487 dbSNP
rs558704631 495 dbSNP
rs772434608 496 dbSNP
rs1358592808 503 dbSNP
rs933538374 508 dbSNP
rs1257980356 509 dbSNP
rs940176773 518 dbSNP
rs569725691 524 dbSNP
rs923515935 533 dbSNP
rs550056025 535 dbSNP
rs1440375691 537 dbSNP
rs10438 545 dbSNP
rs1186436612 548 dbSNP
rs1368487794 549 dbSNP
rs1473497501 550 dbSNP
rs1168442750 554 dbSNP
rs972128301 558 dbSNP
rs1422903733 560 dbSNP
rs192048127 565 dbSNP
rs562109535 570 dbSNP
rs1403678909 577 dbSNP
rs1317457359 579 dbSNP
rs1335122738 582 dbSNP
rs1414954906 598 dbSNP
rs909326720 599 dbSNP
rs908731093 600 dbSNP
rs1175519461 605 dbSNP
rs185845048 609 dbSNP
rs1319268490 612 dbSNP
rs556791757 614 dbSNP
rs1261615213 616 dbSNP
rs1344776965 617 dbSNP
rs921255740 625 dbSNP
rs968042951 626 dbSNP
rs1190937979 630 dbSNP
rs952541513 633 dbSNP
rs1174189308 635 dbSNP
rs1033474046 640 dbSNP
rs980692705 658 dbSNP
rs970667674 661 dbSNP
rs528629909 672 dbSNP
rs990484520 675 dbSNP
rs955882447 677 dbSNP
rs1240716602 683 dbSNP
rs1031962266 688 dbSNP
rs1443438774 689 dbSNP
rs1002570404 690 dbSNP
rs1341243059 692 dbSNP
rs1283095366 698 dbSNP
rs1281944100 701 dbSNP
rs971086886 704 dbSNP
rs765602682 705 dbSNP
rs1256202144 709 dbSNP
rs1025310172 710 dbSNP
rs1009261360 716 dbSNP
rs1214045149 718 dbSNP
rs538975327 719 dbSNP
rs1032107464 720 dbSNP
rs545952497 722 dbSNP
rs1195674267 732 dbSNP
rs577370930 735 dbSNP
rs1432370041 737 dbSNP
rs563690313 738 dbSNP
rs1038606016 742 dbSNP
rs1361181597 749 dbSNP
rs1448480917 750 dbSNP
rs1342156572 754 dbSNP
rs1390710020 757 dbSNP
rs1387677921 767 dbSNP
rs1303810947 771 dbSNP
rs569859983 785 dbSNP
rs1004894175 789 dbSNP
rs1434083836 793 dbSNP
rs544136706 794 dbSNP
rs574789276 803 dbSNP
rs749641668 812 dbSNP
rs1050586238 813 dbSNP
rs934153418 817 dbSNP
rs1488137949 823 dbSNP
rs1210390394 824 dbSNP
rs933486104 834 dbSNP
rs1456286162 835 dbSNP
rs148829205 837 dbSNP
rs1178189642 843 dbSNP
rs1441600547 844 dbSNP
rs1039828891 848 dbSNP
rs1368001234 853 dbSNP
rs549655118 858 dbSNP
rs1473342525 861 dbSNP
rs1295820734 862 dbSNP
rs1260113745 864 dbSNP
rs1398477442 870 dbSNP
rs1446603694 873 dbSNP
rs1330249016 874 dbSNP
rs1377241759 876 dbSNP
rs771355414 894 dbSNP
rs1309905802 898 dbSNP
rs1186385747 902 dbSNP
rs940714772 904 dbSNP
rs1245351864 905 dbSNP
rs1274710313 914 dbSNP
rs1456272894 918 dbSNP
rs1206020775 922 dbSNP
rs1238990130 927 dbSNP
rs75303345 929 dbSNP
rs571675434 931 dbSNP
rs956186358 935 dbSNP
rs924560708 939 dbSNP
rs1271885321 940 dbSNP
rs1167526408 946 dbSNP
rs114987779 959 dbSNP
rs1465411305 966 dbSNP
rs971225008 967 dbSNP
rs1022643843 971 dbSNP
rs1443861992 975 dbSNP
rs1358180297 976 dbSNP
rs937374961 976 dbSNP
rs375274120 980 dbSNP
rs181961578 991 dbSNP
rs190823293 993 dbSNP
rs1316035384 998 dbSNP
rs1351094429 1004 dbSNP
rs1258414563 1006 dbSNP
rs536573591 1008 dbSNP
rs1309056800 1020 dbSNP
rs970533125 1026 dbSNP
rs1024922423 1030 dbSNP
rs533907227 1030 dbSNP
rs567549767 1037 dbSNP
rs185133080 1038 dbSNP
rs1261612298 1043 dbSNP
rs12917362 1044 dbSNP
rs1032387863 1047 dbSNP
rs1195058474 1049 dbSNP
rs1169981371 1056 dbSNP
rs1426153227 1056 dbSNP
rs1000477500 1058 dbSNP
rs1358276054 1062 dbSNP
rs888902358 1063 dbSNP
rs1314138749 1065 dbSNP
rs1337806783 1066 dbSNP
rs998330712 1069 dbSNP
rs1028680056 1092 dbSNP
rs1406212346 1099 dbSNP
rs1278773036 1109 dbSNP
rs1363816127 1113 dbSNP
rs779147798 1115 dbSNP
rs1420466497 1120 dbSNP
rs1163297533 1124 dbSNP
rs901978798 1125 dbSNP
rs1253167120 1126 dbSNP
rs1178386750 1128 dbSNP
rs1278162564 1132 dbSNP
rs1313037585 1134 dbSNP
rs1213327099 1135 dbSNP
rs1036634221 1146 dbSNP
rs1488009382 1152 dbSNP
rs1231865314 1157 dbSNP
rs3759861 1158 dbSNP
rs1469590402 1159 dbSNP
rs1271025125 1161 dbSNP
rs61191495 1163 dbSNP
rs189594269 1166 dbSNP
rs937322636 1167 dbSNP
rs1191022555 1180 dbSNP
rs749060039 1180 dbSNP
rs927386007 1182 dbSNP
rs915238967 1187 dbSNP
rs60105418 1193 dbSNP
rs1175142887 1203 dbSNP
rs924502000 1204 dbSNP
rs567099954 1214 dbSNP
rs543651165 1225 dbSNP
rs1346947651 1230 dbSNP
rs917721379 1231 dbSNP
rs1273986101 1236 dbSNP
rs1297746162 1236 dbSNP
rs1368063035 1241 dbSNP
rs1236695635 1246 dbSNP
rs988080816 1248 dbSNP
rs751090222 1258 dbSNP
rs915770342 1273 dbSNP
rs956868278 1278 dbSNP
rs1450352355 1286 dbSNP
rs1221507202 1295 dbSNP
rs1247599156 1307 dbSNP
rs145447708 1308 dbSNP
rs979088929 1309 dbSNP
rs1438522022 1312 dbSNP
rs372845004 1319 dbSNP
rs1461274454 1328 dbSNP
rs1413274962 1330 dbSNP
rs1161891516 1333 dbSNP
rs982814581 1333 dbSNP
rs1417901384 1339 dbSNP
rs16976101 1342 dbSNP
rs1191332278 1343 dbSNP
rs1376502080 1346 dbSNP
rs1241190912 1347 dbSNP
rs150069875 1347 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 51187.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000260443.4 | 3UTR | CUAAAUUAUUUUAUUUUUUACAUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
180 hsa-miR-4524a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055251 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT055826 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT060573 CCND1 cyclin D1 2 2
MIRT061013 C1ORF21 chromosome 1 open reading frame 21 2 6
MIRT064694 CCND2 cyclin D2 2 4
MIRT075268 SNTB2 syntrophin beta 2 2 4
MIRT079668 NAPG NSF attachment protein gamma 2 12
MIRT081651 CCNE1 cyclin E1 2 4
MIRT082996 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT083463 RALGAPB Ral GTPase activating protein non-catalytic beta subunit 2 4
MIRT085755 RIF1 replication timing regulatory factor 1 2 2
MIRT086022 UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 2 2
MIRT087431 ZNRF3 zinc and ring finger 3 2 2
MIRT088786 SOCS5 suppressor of cytokine signaling 5 2 2
MIRT089221 ACTR2 ARP2 actin related protein 2 homolog 2 2
MIRT093696 PI4K2B phosphatidylinositol 4-kinase type 2 beta 2 6
MIRT095090 SEC24A SEC24 homolog A, COPII coat complex component 2 4
MIRT096249 CANX calnexin 2 2
MIRT100215 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 2 2
MIRT100746 VEGFA vascular endothelial growth factor A 2 12
MIRT100904 CD2AP CD2 associated protein 2 2
MIRT102647 UBN2 ubinuclein 2 2 10
MIRT103882 FOXK1 forkhead box K1 2 2
MIRT104246 DMTF1 cyclin D binding myb like transcription factor 1 2 2
MIRT106310 ZFHX4 zinc finger homeobox 4 2 6
MIRT107696 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT114943 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT117671 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT133799 SKI SKI proto-oncogene 2 2
MIRT140167 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT142279 DCTN5 dynactin subunit 5 2 8
MIRT143288 N4BP1 NEDD4 binding protein 1 2 2
MIRT165939 CREBRF CREB3 regulatory factor 2 2
MIRT175251 PSAT1 phosphoserine aminotransferase 1 2 6
MIRT186381 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT191470 PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A 2 2
MIRT196480 TAOK1 TAO kinase 1 2 2
MIRT201470 SNRPB2 small nuclear ribonucleoprotein polypeptide B2 2 8
MIRT204615 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 8
MIRT204646 MOB4 MOB family member 4, phocein 2 8
MIRT204749 BZW1 basic leucine zipper and W2 domains 1 2 12
MIRT206031 NUP50 nucleoporin 50 2 6
MIRT211196 FGF2 fibroblast growth factor 2 2 4
MIRT229353 ZNF449 zinc finger protein 449 2 2
MIRT247138 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT249461 ZNF691 zinc finger protein 691 2 4
MIRT256314 CDC42SE2 CDC42 small effector 2 2 2
MIRT258419 WIPI2 WD repeat domain, phosphoinositide interacting 2 2 2
MIRT265083 CHEK1 checkpoint kinase 1 2 2
MIRT270561 SETD1B SET domain containing 1B 2 2
MIRT274749 RAB3IP RAB3A interacting protein 2 2
MIRT277515 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 4
MIRT289642 CBX2 chromobox 2 2 2
MIRT301001 MTMR3 myotubularin related protein 3 2 2
MIRT307149 CTDSPL CTD small phosphatase like 2 4
MIRT309021 USP53 ubiquitin specific peptidase 53 2 2
MIRT314100 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 2 8
MIRT319338 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT320619 ZNRF2 zinc and ring finger 2 2 2
MIRT324285 LURAP1L leucine rich adaptor protein 1 like 2 2
MIRT446498 ASCC1 activating signal cointegrator 1 complex subunit 1 2 2
MIRT448437 TLL1 tolloid like 1 2 2
MIRT461537 ACTR3B ARP3 actin related protein 3 homolog B 2 2
MIRT463162 ZNF367 zinc finger protein 367 2 10
MIRT463493 ZC3H10 zinc finger CCCH-type containing 10 2 2
MIRT465154 TSC22D2 TSC22 domain family member 2 2 2
MIRT466418 TFAP2A transcription factor AP-2 alpha 2 8
MIRT468278 SFT2D2 SFT2 domain containing 2 2 2
MIRT469399 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT471941 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT473688 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT479618 CDC25A cell division cycle 25A 2 2
MIRT482098 AKT3 AKT serine/threonine kinase 3 2 4
MIRT483995 ATAD5 ATPase family, AAA domain containing 5 2 12
MIRT485205 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 8
MIRT498763 C3orf38 chromosome 3 open reading frame 38 2 8
MIRT498961 ORC4 origin recognition complex subunit 4 2 8
MIRT499440 ODF2L outer dense fiber of sperm tails 2 like 2 8
MIRT500080 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 8
MIRT500305 ZNF622 zinc finger protein 622 2 8
MIRT500410 ZMAT3 zinc finger matrin-type 3 2 8
MIRT500789 TLK1 tousled like kinase 1 2 6
MIRT500930 SRPR SRP receptor alpha subunit 2 6
MIRT500943 SREK1 splicing regulatory glutamic acid and lysine rich protein 1 2 8
MIRT501068 SMAD7 SMAD family member 7 2 8
MIRT501711 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT502627 DDX3X DEAD-box helicase 3, X-linked 2 8
MIRT502910 CDCA4 cell division cycle associated 4 2 8
MIRT502935 CDC37L1 cell division cycle 37 like 1 2 8
MIRT504531 ZNF620 zinc finger protein 620 2 6
MIRT505106 YTHDC1 YTH domain containing 1 2 6
MIRT505337 TMEM245 transmembrane protein 245 2 6
MIRT505383 TMEM100 transmembrane protein 100 2 2
MIRT505678 SESTD1 SEC14 and spectrin domain containing 1 2 6
MIRT506157 PLAG1 PLAG1 zinc finger 2 8
MIRT506183 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 6
MIRT506475 MYO5A myosin VA 2 6
MIRT506826 KIF23 kinesin family member 23 2 6
MIRT507160 GAS2L3 growth arrest specific 2 like 3 2 2
MIRT507511 DYNLL2 dynein light chain LC8-type 2 2 4
MIRT507845 CCNE2 cyclin E2 2 6
MIRT510403 ZNF507 zinc finger protein 507 2 2
MIRT518078 TRIM35 tripartite motif containing 35 2 2
MIRT518982 NNT nicotinamide nucleotide transhydrogenase 2 4
MIRT521045 SLC2A3 solute carrier family 2 member 3 2 4
MIRT521190 SBNO1 strawberry notch homolog 1 2 6
MIRT522088 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT524846 ARPP19 cAMP regulated phosphoprotein 19 2 2
MIRT527787 TMEM44 transmembrane protein 44 2 4
MIRT537803 EFNB2 ephrin B2 2 4
MIRT540830 GNAT1 G protein subunit alpha transducin 1 2 4
MIRT541140 PISD phosphatidylserine decarboxylase 2 2
MIRT541419 CBX4 chromobox 4 2 2
MIRT543517 PRSS21 protease, serine 21 2 2
MIRT543824 GSG1 germ cell associated 1 2 2
MIRT544959 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 2
MIRT545179 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 4
MIRT545335 CCDC83 coiled-coil domain containing 83 2 2
MIRT545518 RSL24D1 ribosomal L24 domain containing 1 2 2
MIRT545670 DECR1 2,4-dienoyl-CoA reductase 1 2 2
MIRT545931 ZBTB44 zinc finger and BTB domain containing 44 2 4
MIRT546102 USP48 ubiquitin specific peptidase 48 2 4
MIRT546598 SALL1 spalt like transcription factor 1 2 4
MIRT546626 RTN4 reticulon 4 2 2
MIRT547651 KPNA3 karyopherin subunit alpha 3 2 2
MIRT547987 HCFC2 host cell factor C2 2 4
MIRT548717 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT548931 CDK17 cyclin dependent kinase 17 2 2
MIRT549067 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT549266 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT550460 OSCAR osteoclast associated, immunoglobulin-like receptor 2 4
MIRT550806 FAM229B family with sequence similarity 229 member B 2 2
MIRT552024 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT552334 ZNF704 zinc finger protein 704 2 2
MIRT552732 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT553795 SZRD1 SUZ RNA binding domain containing 1 2 4
MIRT554694 RNF149 ring finger protein 149 2 2
MIRT555133 PTPRD protein tyrosine phosphatase, receptor type D 2 2
MIRT555264 PRDM4 PR/SET domain 4 2 2
MIRT556848 KANK1 KN motif and ankyrin repeat domains 1 2 4
MIRT557474 GPR27 G protein-coupled receptor 27 2 4
MIRT558018 EXT1 exostosin glycosyltransferase 1 2 2
MIRT558498 CYP26B1 cytochrome P450 family 26 subfamily B member 1 2 4
MIRT558579 CREBL2 cAMP responsive element binding protein like 2 2 4
MIRT558610 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT558650 CNKSR3 CNKSR family member 3 2 2
MIRT558986 CA8 carbonic anhydrase 8 2 2
MIRT559141 BTN3A3 butyrophilin subfamily 3 member A3 2 2
MIRT559327 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 2 2
MIRT562021 LANCL1 LanC like 1 2 2
MIRT562869 KIAA1456 KIAA1456 2 2
MIRT563074 SLC25A12 solute carrier family 25 member 12 2 2
MIRT563496 DLGAP3 DLG associated protein 3 2 2
MIRT563890 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 2
MIRT564311 CCNT1 cyclin T1 2 2
MIRT564942 XKR7 XK related 7 2 2
MIRT564979 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT565423 TEF TEF, PAR bZIP transcription factor 2 2
MIRT566824 MAP3K7 mitogen-activated protein kinase kinase kinase 7 2 2
MIRT571961 KIF5B kinesin family member 5B 2 2
MIRT575877 Cask calcium/calmodulin-dependent serine protein kinase (MAGUK family) 2 3
MIRT576523 Txlna taxilin alpha 2 2
MIRT614693 TRAK1 trafficking kinesin protein 1 2 2
MIRT616065 ZC3H14 zinc finger CCCH-type containing 14 2 2
MIRT618838 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT624626 ATXN2 ataxin 2 2 2
MIRT624652 ASAH2 N-acylsphingosine amidohydrolase 2 2 2
MIRT640314 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT659248 CUL3 cullin 3 2 2
MIRT680972 DCAF17 DDB1 and CUL4 associated factor 17 2 2
MIRT682261 RS1 retinoschisin 1 2 2
MIRT682505 GLP2R glucagon like peptide 2 receptor 2 2
MIRT693904 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT699214 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT699373 SLC30A6 solute carrier family 30 member 6 2 2
MIRT699451 SLC16A9 solute carrier family 16 member 9 2 2
MIRT701230 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT702849 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT706163 CASK calcium/calmodulin dependent serine protein kinase 2 3
MIRT718990 UTP15 UTP15, small subunit processome component 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4524a-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-4524a-5p Cetuximab resistant tissue (colorectal carcinoma)

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