pre-miRNA Information
pre-miRNA hsa-mir-367   
Genomic Coordinates chr4: 112647874 - 112647941
Synonyms MIRN367, hsa-mir-367, MIR367
Description Homo sapiens miR-367 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-367-3p
Sequence 44| AAUUGCACUUUAGCAAUGGUGA |65
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN24411246 17 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs535597757 1 dbSNP
rs1013348949 11 dbSNP
rs896333735 12 dbSNP
rs751269136 14 dbSNP
rs1163501507 16 dbSNP
rs757092597 21 dbSNP
Putative Targets

Gene Information
Gene Symbol VPS4B   
Synonyms MIG1, SKD1, SKD1B, VPS4-2
Description vacuolar protein sorting 4 homolog B
Transcript NM_004869   
Expression
Putative miRNA Targets on VPS4B
3'UTR of VPS4B
(miRNA target sites are highlighted)
>VPS4B|NM_004869|3'UTR
   1 GCCAAAGACAAGGAAGATGCTTACCATATGTATTCTTTCTTTCATAGATATTTTTGTCTATTTGGATCGCATTAATTGTT
  81 TCCAGTAAAACTCTTTTACCACAGGGAAATACACATCTCACTTCAGAGTTCCATTAGGTTTTATATTGTACTTTTCCTCC
 161 ATTACTTATTAAATACTCCTATTAACAAAAGGTACAAAATAACAGGTTATGAGGAAATGAGCGATATATGAACGGCATAA
 241 AAACAGAAATTACCCAGTAAAAAGGATGTCAGAAATTGACATACAAATATTTACAATTTTTATGAATGGTGGTCTTTGCA
 321 AAGAGCATTTATATTTTCTTTTTTTTTTACTAAAATGATATAGGGTTTATTTTATATTTTCAAAAAAATTGTTAAACATC
 401 ATTCTTATCAATGTAAAATTTACGTTATTAAAAAATTACAAATGATAGAATCTTTACTCAGGGATGGGCAATAAAACAGC
 481 AAAGAGCTTTGTGATTGGGTTTGAAAGATTTTGAATTATAGACAGTGCTCTTAATAGTTTTTAATAAGTTGATATTTTTT
 561 TCTGTGTAGATTTAAATAATTTCTTTAAAAGCGTAAGCTTTGGCTGGGCATGGTGGCTTATGCCTGTAATCCCAGCACTT
 641 TGGGAGGCTACGATGGGTGGATCACCTGAGGTCAGGAGTTCAAGACCAGTCTGGCCAACATGGTGAAATGCCGTCTCTAC
 721 TAAAAATACAAAAATTAGCTGGGCATGATGGCGAGTGTCTGTAATCCCAGCTACTCAGGAGGCTGAGGCGGGAGAATCAC
 801 TTGAACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATCGCGCTACTGCATTCCAGCCTGGGCGCCGAGATAGCGCCATTG
 881 CACTCCAGCCTGGGCGACTGAATAAAACTCTGTCTCAAAAAAAAACAAAAACGGTAAGCTTTTATATTTAATTAACTGAT
 961 ACCTTTCACTGTGCAATCTCAAGAGGAAGATTTTCTAAATTAGACATTGTCTTTACCTTAAAGAAGAAAATTGTCTATTT
1041 CAGTGTCTTTTTTAGCAAGATTGACCAAAACAGGTGGTAGGTGTGTAATTTTTAACTGTCATGAAATACTGTAATGCGCA
1121 CCTTTGCTAATAAGGAAATGGTCTCCCTTTGAATTATGGGAAGTTTCTTGTCTGTGATATGGGGTGTCTGTGTACATATA
1201 TGTATATTTCCTTTTTTAATACAGGATAATAATATGGGGTCTTGTCCTTCACCTTTTAAGTTCAGGGAACAGTTTGTCCT
1281 GACCACACATATGTTATCAGTGTAATGCTTTATGAAGCTTTAGAAATGAGCTCATGACTCATTAAAAAATAATAAACGAT
1361 GCTATTTTAATATTTTCAAATAAATAATCTGAGGATGTGTTTCATACTTTAGCATCAACGCTGAGTTGTGCCTTGTAGAA
1441 TTGCATTGTCTATACATGCAAAAGACTATTAAGTTAGGATGAACTAGATTCCCTAATTACAGTGAAATTCTATCTTGCAA
1521 ATGCTATAGAATAACTTGCATTTTAAAGTGTATTTGCACATTTTACATATGCTATGTGGTTGCCTTTGGGTTTTCTGTAC
1601 AGATTGTTTTTGTTATTAAATGGAAAAGGCCTGAATTATGCTCTTATGTGAAGTAAATTGATATAACCTATTGACTGTAT
1681 TCTGTGTATTATTCTTTATTTTGGGACCTTCTGTGTAAAAGAAAATATTACCTAAATTGGTTAGATACAAAGAAATCATT
1761 AAAATTATTAATGTATATATGAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agUGGUAACGAUUUCACGUUAa 5'
            ||| || | |  ||||||| 
Target 5' atACC-TTTC-ACTGTGCAATc 3'
959 - 978 150.00 -9.89
2
miRNA  3' agUG-GUA-ACGAU-UUCACGUUAa 5'
            || ||| ||:||  ||||:||| 
Target 5' ccACACATATGTTATCAGTGTAATg 3'
1283 - 1307 148.00 -14.20
3
miRNA  3' agUGGUAACGAUUU-CACGUUAa 5'
            || : || ||:: |||:||| 
Target 5' aaACAGGTGGTAGGTGTGTAATt 3'
1068 - 1090 140.00 -10.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31502717 7 COSMIC
COSN28687851 28 COSMIC
COSN31605575 39 COSMIC
COSN30113745 69 COSMIC
COSN24143122 157 COSMIC
COSN31572701 338 COSMIC
COSN32055673 377 COSMIC
COSN30174759 503 COSMIC
COSN6130433 593 COSMIC
COSN28740516 852 COSMIC
COSN29653769 916 COSMIC
COSN31609067 1167 COSMIC
COSN30174008 1210 COSMIC
COSN31594777 1217 COSMIC
COSN28758358 1241 COSMIC
COSN26322645 1263 COSMIC
COSN26648862 1322 COSMIC
COSN20115130 1357 COSMIC
COSN28740878 1403 COSMIC
COSN20093450 1477 COSMIC
COSN26574251 1492 COSMIC
COSN31517229 1641 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs757809299 2 dbSNP
rs752145373 4 dbSNP
rs764223382 11 dbSNP
rs762954190 12 dbSNP
rs752896694 16 dbSNP
rs563130085 24 dbSNP
rs759856814 30 dbSNP
rs772968002 35 dbSNP
rs771892843 36 dbSNP
rs1424337011 37 dbSNP
rs575620345 37 dbSNP
rs1430393815 38 dbSNP
rs758948160 39 dbSNP
rs761697944 44 dbSNP
rs774292261 48 dbSNP
rs1274451524 60 dbSNP
rs754878648 68 dbSNP
rs1050690635 69 dbSNP
rs546542282 75 dbSNP
rs1328221184 78 dbSNP
rs1298893280 84 dbSNP
rs1359052795 85 dbSNP
rs558857188 87 dbSNP
rs1298438718 91 dbSNP
rs1363382404 92 dbSNP
rs1216958629 98 dbSNP
rs912942123 104 dbSNP
rs1359180634 109 dbSNP
rs760680103 115 dbSNP
rs1236429067 117 dbSNP
rs1053382935 128 dbSNP
rs1352719756 145 dbSNP
rs865863879 146 dbSNP
rs925431414 155 dbSNP
rs934568711 164 dbSNP
rs35536359 165 dbSNP
rs1435702258 173 dbSNP
rs577333909 176 dbSNP
rs1171590844 179 dbSNP
rs80079510 181 dbSNP
rs769892106 191 dbSNP
rs775557773 192 dbSNP
rs1419497059 222 dbSNP
rs539062279 223 dbSNP
rs1346594763 226 dbSNP
rs933347625 229 dbSNP
rs922004174 230 dbSNP
rs540699437 233 dbSNP
rs942128514 234 dbSNP
rs1367727267 237 dbSNP
rs909353109 239 dbSNP
rs984053331 245 dbSNP
rs1307006313 246 dbSNP
rs1025759902 251 dbSNP
rs950949229 254 dbSNP
rs1035940962 267 dbSNP
rs981064243 286 dbSNP
rs969659907 299 dbSNP
rs1219673844 309 dbSNP
rs1023053863 317 dbSNP
rs962597419 320 dbSNP
rs1277680540 323 dbSNP
rs187169938 326 dbSNP
rs1341738277 330 dbSNP
rs1195987064 338 dbSNP
rs554531789 340 dbSNP
rs537806585 342 dbSNP
rs1439696289 343 dbSNP
rs1179621099 344 dbSNP
rs1018500822 346 dbSNP
rs1403198373 349 dbSNP
rs1419146683 349 dbSNP
rs143977723 349 dbSNP
rs1376019020 350 dbSNP
rs1399462370 350 dbSNP
rs1447486456 351 dbSNP
rs1031491601 357 dbSNP
rs1006774937 361 dbSNP
rs1315307604 363 dbSNP
rs376521260 364 dbSNP
rs557778697 365 dbSNP
rs1312298183 372 dbSNP
rs575235210 373 dbSNP
rs1332614927 376 dbSNP
rs999119622 381 dbSNP
rs1412064161 389 dbSNP
rs183983701 390 dbSNP
rs1171015179 391 dbSNP
rs1477194098 395 dbSNP
rs1420873409 399 dbSNP
rs1234886988 403 dbSNP
rs1029287183 407 dbSNP
rs149335522 409 dbSNP
rs553230222 411 dbSNP
rs1055002 415 dbSNP
rs1207749828 422 dbSNP
rs1039459031 423 dbSNP
rs1055100590 424 dbSNP
rs1218295176 428 dbSNP
rs1330848675 429 dbSNP
rs1316092079 430 dbSNP
rs1295216372 436 dbSNP
rs1357163396 436 dbSNP
rs1303250975 445 dbSNP
rs904042463 448 dbSNP
rs1235428206 452 dbSNP
rs1276316822 454 dbSNP
rs1317411817 457 dbSNP
rs1215622939 459 dbSNP
rs1275699389 461 dbSNP
rs1441235065 462 dbSNP
rs1209853683 463 dbSNP
rs1258727825 465 dbSNP
rs1486415771 470 dbSNP
rs1191071105 474 dbSNP
rs1422235861 476 dbSNP
rs749697229 477 dbSNP
rs909311476 482 dbSNP
rs192546783 486 dbSNP
rs1283005998 500 dbSNP
rs929509260 502 dbSNP
rs928812644 503 dbSNP
rs918210377 507 dbSNP
rs533879264 510 dbSNP
rs1377057497 513 dbSNP
rs1416777255 517 dbSNP
rs1055004 519 dbSNP
rs930020766 522 dbSNP
rs9952589 523 dbSNP
rs1397420892 526 dbSNP
rs974202523 536 dbSNP
rs970304943 544 dbSNP
rs1219174536 545 dbSNP
rs567604461 546 dbSNP
rs1423951961 547 dbSNP
rs1018115808 552 dbSNP
rs1261992507 555 dbSNP
rs985221408 564 dbSNP
rs188708332 566 dbSNP
rs549229842 568 dbSNP
rs990252501 586 dbSNP
rs1238593792 592 dbSNP
rs562485591 593 dbSNP
rs1477621552 624 dbSNP
rs1031878765 626 dbSNP
rs1396612167 629 dbSNP
rs1417613720 630 dbSNP
rs1360129716 631 dbSNP
rs1456616031 632 dbSNP
rs1275360448 638 dbSNP
rs1222387405 642 dbSNP
rs1329423019 647 dbSNP
rs138666695 650 dbSNP
rs779777861 652 dbSNP
rs1373889498 653 dbSNP
rs1226013357 657 dbSNP
rs1029505687 663 dbSNP
rs1285837873 677 dbSNP
rs891485273 681 dbSNP
rs1287043305 684 dbSNP
rs532721950 691 dbSNP
rs1193778275 694 dbSNP
rs996736813 696 dbSNP
rs899777002 704 dbSNP
rs999964764 709 dbSNP
rs1177764724 712 dbSNP
rs111447468 713 dbSNP
rs1454442636 715 dbSNP
rs375071434 717 dbSNP
rs1006672579 727 dbSNP
rs1445493723 728 dbSNP
rs887859097 731 dbSNP
rs540510743 735 dbSNP
rs750148209 736 dbSNP
rs948234929 738 dbSNP
rs896642112 745 dbSNP
rs1294982167 746 dbSNP
rs1457947892 753 dbSNP
rs1397318893 758 dbSNP
rs1445288960 763 dbSNP
rs929393209 770 dbSNP
rs1336727850 776 dbSNP
rs930195485 781 dbSNP
rs1240686803 790 dbSNP
rs1282046855 799 dbSNP
rs1355260505 813 dbSNP
rs371704870 819 dbSNP
rs778649679 820 dbSNP
rs1274570441 826 dbSNP
rs183290844 831 dbSNP
rs1250923368 838 dbSNP
rs1421458334 840 dbSNP
rs1185204210 841 dbSNP
rs1366903269 842 dbSNP
rs1475040704 844 dbSNP
rs1045890140 846 dbSNP
rs1420128858 855 dbSNP
rs1177771990 860 dbSNP
rs948961985 862 dbSNP
rs1397593600 863 dbSNP
rs866354822 865 dbSNP
rs142026803 866 dbSNP
rs989832194 867 dbSNP
rs544319475 870 dbSNP
rs1192036990 874 dbSNP
rs1339499323 881 dbSNP
rs1488177958 886 dbSNP
rs957297824 895 dbSNP
rs924310817 896 dbSNP
rs575198869 898 dbSNP
rs922423740 912 dbSNP
rs192374656 918 dbSNP
rs1198509394 919 dbSNP
rs955127191 921 dbSNP
rs988764639 924 dbSNP
rs546077564 925 dbSNP
rs879764528 926 dbSNP
rs577104577 930 dbSNP
rs1420059887 931 dbSNP
rs1029487995 932 dbSNP
rs1169883302 942 dbSNP
rs1374142497 945 dbSNP
rs1000305838 948 dbSNP
rs1171129755 970 dbSNP
rs1375228216 980 dbSNP
rs1414978382 981 dbSNP
rs1302911463 983 dbSNP
rs554047513 984 dbSNP
rs1381131744 991 dbSNP
rs763876769 996 dbSNP
rs1366227993 998 dbSNP
rs975267817 1005 dbSNP
rs1230992862 1018 dbSNP
rs1348360572 1023 dbSNP
rs1401382037 1023 dbSNP
rs1361075839 1026 dbSNP
rs1013994067 1029 dbSNP
rs1259842767 1030 dbSNP
rs896673339 1043 dbSNP
rs963990527 1046 dbSNP
rs1056617153 1047 dbSNP
rs533705079 1050 dbSNP
rs1379190359 1054 dbSNP
rs1177001669 1055 dbSNP
rs994437393 1061 dbSNP
rs76003743 1064 dbSNP
rs1175963596 1065 dbSNP
rs187799276 1074 dbSNP
rs367970908 1080 dbSNP
rs1452676958 1098 dbSNP
rs941393722 1101 dbSNP
rs537974362 1107 dbSNP
rs1363457580 1111 dbSNP
rs911209659 1116 dbSNP
rs1049826202 1117 dbSNP
rs550769450 1118 dbSNP
rs1283697285 1122 dbSNP
rs887733629 1126 dbSNP
rs767621087 1129 dbSNP
rs551932011 1130 dbSNP
rs1315295692 1135 dbSNP
rs1026288806 1138 dbSNP
rs532830672 1145 dbSNP
rs993516250 1160 dbSNP
rs1215133900 1161 dbSNP
rs1261346318 1163 dbSNP
rs1486904269 1176 dbSNP
rs1189595625 1177 dbSNP
rs567012673 1180 dbSNP
rs1252887173 1182 dbSNP
rs1455135701 1183 dbSNP
rs1195879985 1186 dbSNP
rs1350453318 1187 dbSNP
rs1378864045 1194 dbSNP
rs1256974827 1195 dbSNP
rs1233437253 1199 dbSNP
rs1346403603 1199 dbSNP
rs116847314 1201 dbSNP
rs1045859338 1204 dbSNP
rs948942514 1235 dbSNP
rs925894589 1240 dbSNP
rs1443036931 1252 dbSNP
rs1219912928 1253 dbSNP
rs1306727916 1264 dbSNP
rs1372393227 1281 dbSNP
rs1223385360 1283 dbSNP
rs1318997397 1289 dbSNP
rs978687439 1293 dbSNP
rs1297463584 1302 dbSNP
rs1398100028 1313 dbSNP
rs894719871 1326 dbSNP
rs1216100530 1327 dbSNP
rs774400216 1333 dbSNP
rs1022613250 1339 dbSNP
rs936268699 1340 dbSNP
rs1404020033 1345 dbSNP
rs1303211474 1347 dbSNP
rs200684840 1357 dbSNP
rs33923407 1357 dbSNP
rs35995969 1358 dbSNP
rs977113420 1358 dbSNP
rs1417959787 1359 dbSNP
rs144135734 1361 dbSNP
rs1014025268 1376 dbSNP
rs1329256522 1377 dbSNP
rs530200981 1378 dbSNP
rs1173152220 1379 dbSNP
rs1478169992 1381 dbSNP
rs182413942 1382 dbSNP
rs994777232 1388 dbSNP
rs975234913 1390 dbSNP
rs544282817 1392 dbSNP
rs1235624778 1394 dbSNP
rs1271473676 1399 dbSNP
rs1005787743 1404 dbSNP
rs1205652926 1413 dbSNP
rs577299320 1417 dbSNP
rs189803662 1418 dbSNP
rs1484449775 1419 dbSNP
rs376427724 1420 dbSNP
rs1257550578 1435 dbSNP
rs1475890221 1441 dbSNP
rs1482510727 1442 dbSNP
rs984419487 1452 dbSNP
rs138878895 1459 dbSNP
rs1026262384 1468 dbSNP
rs1418707016 1468 dbSNP
rs1317941592 1473 dbSNP
rs545037500 1476 dbSNP
rs1277039117 1479 dbSNP
rs993485278 1480 dbSNP
rs1413119560 1485 dbSNP
rs1312520485 1490 dbSNP
rs1356387097 1492 dbSNP
rs1053208646 1498 dbSNP
rs934515007 1502 dbSNP
rs1339284867 1511 dbSNP
rs569810972 1512 dbSNP
rs1275507830 1513 dbSNP
rs573195451 1520 dbSNP
rs1210680795 1521 dbSNP
rs770422435 1524 dbSNP
rs894597629 1526 dbSNP
rs532047841 1531 dbSNP
rs1190383379 1539 dbSNP
rs1241029839 1542 dbSNP
rs748705114 1548 dbSNP
rs1188240257 1552 dbSNP
rs1422739548 1556 dbSNP
rs779689846 1559 dbSNP
rs903460823 1570 dbSNP
rs1174067226 1572 dbSNP
rs1376285251 1577 dbSNP
rs925252773 1578 dbSNP
rs1041401568 1579 dbSNP
rs1316233055 1589 dbSNP
rs1325964432 1592 dbSNP
rs771658929 1603 dbSNP
rs1432054398 1604 dbSNP
rs1272413474 1605 dbSNP
rs1369481715 1608 dbSNP
rs1466356685 1611 dbSNP
rs754764549 1615 dbSNP
rs745415010 1620 dbSNP
rs975118345 1622 dbSNP
rs942480555 1627 dbSNP
rs1203008899 1631 dbSNP
rs1473850878 1638 dbSNP
rs915583255 1649 dbSNP
rs1217372427 1658 dbSNP
rs115363653 1663 dbSNP
rs746332208 1691 dbSNP
rs1194013542 1694 dbSNP
rs1453788091 1694 dbSNP
rs1187513279 1704 dbSNP
rs1396672475 1709 dbSNP
rs185878963 1713 dbSNP
rs144936118 1717 dbSNP
rs1401328167 1723 dbSNP
rs1320447286 1728 dbSNP
rs971820805 1731 dbSNP
rs1440840356 1733 dbSNP
rs140940350 1740 dbSNP
rs1373686153 1746 dbSNP
rs1236371432 1747 dbSNP
rs1257102229 1752 dbSNP
rs1278566966 1754 dbSNP
rs71162633 1760 dbSNP
rs72169634 1760 dbSNP
rs74169962 1760 dbSNP
rs1357905947 1763 dbSNP
rs537935425 1786 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 9525.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' agUGGUAACGAUUUCACGUUAa 5'
            ||| || | |  ||||||| 
Target 5' auACC-UUUC-ACUGUGCAAUc 3'
1 - 20
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000238497.5 | 3UTR | AUACCUUUCACUGUGCAAUCUCAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28544 Breast cancer -0.659 2.3e-4 -0.702 6.6e-5 24 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.825 4.3e-2 0.900 1.9e-2 5 Click to see details
GSE17306 Multiple myeloma -0.243 4.6e-2 0.317 1.3e-2 49 Click to see details
GSE26953 Aortic valvular endothelial cells 0.257 1.1e-1 0.176 2.1e-1 24 Click to see details
GSE28260 Renal cortex and medulla 0.3 1.6e-1 0.367 1.1e-1 13 Click to see details
GSE42095 Differentiated embryonic stem cells -0.164 2.3e-1 -0.227 1.5e-1 23 Click to see details
GSE14794 Lymphoblastoid cells 0.075 2.4e-1 0.087 2.1e-1 90 Click to see details
GSE38226 Liver fibrosis 0.15 2.6e-1 -0.181 2.2e-1 21 Click to see details
GSE32688 Pancreatic cancer -0.093 3.1e-1 -0.114 2.7e-1 32 Click to see details
GSE21687 Ependynoma primary tumors 0.047 3.6e-1 0.040 3.8e-1 64 Click to see details
GSE19350 CNS germ cell tumors -0.108 3.7e-1 0.056 4.3e-1 12 Click to see details
GSE21849 B cell lymphoma -0.061 3.8e-1 -0.043 4.1e-1 29 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.065 3.8e-1 0.069 3.7e-1 25 Click to see details
GSE27834 Pluripotent stem cells -0.082 3.8e-1 -0.041 4.4e-1 16 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.049 4.2e-1 -0.340 7.1e-2 20 Click to see details
GSE17498 Multiple myeloma 0.005 4.9e-1 0.092 2.9e-1 40 Click to see details
GSE17498 Multiple myeloma 0.005 4.9e-1 0.092 2.9e-1 40 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
255 hsa-miR-367-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055315 DUSP5 dual specificity phosphatase 5 2 8
MIRT055791 PLEKHA1 pleckstrin homology domain containing A1 2 12
MIRT057114 DDIT4 DNA damage inducible transcript 4 2 4
MIRT059663 GATAD2B GATA zinc finger domain containing 2B 2 2
MIRT059926 ZDHHC5 zinc finger DHHC-type containing 5 2 2
MIRT061610 BTG2 BTG anti-proliferation factor 2 2 6
MIRT066478 HMGA2 high mobility group AT-hook 2 2 2
MIRT069388 ZFYVE21 zinc finger FYVE-type containing 21 2 2
MIRT069972 GEMIN2 gem nuclear organelle associated protein 2 2 2
MIRT074764 CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 2 2
MIRT076199 GID4 GID complex subunit 4 homolog 2 6
MIRT077512 UBE2Z ubiquitin conjugating enzyme E2 Z 2 4
MIRT077903 TOB1 transducer of ERBB2, 1 2 6
MIRT082250 MED29 mediator complex subunit 29 2 4
MIRT082434 CIC capicua transcriptional repressor 2 6
MIRT082474 PPP1R37 protein phosphatase 1 regulatory subunit 37 2 2
MIRT082778 ZNF264 zinc finger protein 264 2 2
MIRT084533 BCL2L11 BCL2 like 11 2 8
MIRT085309 UBXN4 UBX domain protein 4 2 8
MIRT086365 SSFA2 sperm specific antigen 2 2 8
MIRT087455 NF2 neurofibromin 2 2 2
MIRT088865 FOXN2 forkhead box N2 2 12
MIRT092185 ITPR1 inositol 1,4,5-trisphosphate receptor type 1 2 6
MIRT092326 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT093533 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 6
MIRT096935 PAPD7 poly(A) RNA polymerase D7, non-canonical 2 8
MIRT097026 MAP1B microtubule associated protein 1B 2 4
MIRT099137 MYLIP myosin regulatory light chain interacting protein 2 6
MIRT099905 SOX4 SRY-box 4 2 12
MIRT102289 DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 2 10
MIRT102507 KLHDC10 kelch domain containing 10 2 2
MIRT102891 INSIG1 insulin induced gene 1 2 2
MIRT109188 VMA21 VMA21, vacuolar ATPase assembly factor 2 4
MIRT124567 PRRC2B proline rich coiled-coil 2B 2 2
MIRT135568 SPRYD4 SPRY domain containing 4 2 2
MIRT161135 SLC25A36 solute carrier family 25 member 36 2 6
MIRT163995 KIAA1109 KIAA1109 2 4
MIRT164689 RNF4 ring finger protein 4 2 2
MIRT167705 HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 2 8
MIRT178956 USP28 ubiquitin specific peptidase 28 2 2
MIRT185717 ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 2 2
MIRT186264 TCEB3 elongin A 2 2
MIRT186537 TWF1 twinfilin actin binding protein 1 2 4
MIRT186628 COX20 COX20, cytochrome c oxidase assembly factor 2 8
MIRT189373 TXLNA taxilin alpha 2 4
MIRT197013 EIF1 eukaryotic translation initiation factor 1 2 10
MIRT206437 YIPF4 Yip1 domain family member 4 2 2
MIRT211228 FGF2 fibroblast growth factor 2 2 10
MIRT214529 C5ORF24 chromosome 5 open reading frame 24 2 2
MIRT216034 IL6ST interleukin 6 signal transducer 2 10
MIRT218084 TULP4 tubby like protein 4 2 2
MIRT242418 CCDC113 coiled-coil domain containing 113 2 2
MIRT243162 SOX11 SRY-box 11 2 2
MIRT250943 CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 2 4
MIRT253350 ZNF417 zinc finger protein 417 2 2
MIRT271968 ARF1 ADP ribosylation factor 1 2 2
MIRT273214 ZNF695 zinc finger protein 695 2 4
MIRT296114 SLC12A5 solute carrier family 12 member 5 2 2
MIRT301711 TEF TEF, PAR bZIP transcription factor 2 2
MIRT316477 ARID1B AT-rich interaction domain 1B 2 6
MIRT322174 CLN8 CLN8, transmembrane ER and ERGIC protein 2 4
MIRT341538 CNIH1 cornichon family AMPA receptor auxiliary protein 1 2 6
MIRT356062 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT443579 PPIC peptidylprolyl isomerase C 2 2
MIRT448825 FKBP1A FK506 binding protein 1A 2 4
MIRT451494 FOPNL FGFR1OP N-terminal like 2 2
MIRT452694 MDM2 MDM2 proto-oncogene 2 2
MIRT453167 CNOT4 CCR4-NOT transcription complex subunit 4 2 6
MIRT454588 SLC33A1 solute carrier family 33 member 1 2 4
MIRT455794 TAF8 TATA-box binding protein associated factor 8 2 4
MIRT456010 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456044 KIAA1586 KIAA1586 2 2
MIRT456763 TMEM239 transmembrane protein 239 2 4
MIRT458068 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT459230 MRPS21 mitochondrial ribosomal protein S21 2 2
MIRT459534 MFF mitochondrial fission factor 2 6
MIRT459759 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT460236 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT461104 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462924 ZNRF3 zinc and ring finger 3 2 2
MIRT463476 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463516 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT465503 TOR1B torsin family 1 member B 2 2
MIRT469525 RBFOX2 RNA binding protein, fox-1 homolog 2 2 8
MIRT470079 PTGES2 prostaglandin E synthase 2 2 2
MIRT471581 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT473451 MCOLN2 mucolipin 2 2 8
MIRT475882 H3F3C H3 histone family member 3C 2 10
MIRT475915 H3F3B H3 histone family member 3B 2 8
MIRT476195 GOLGA8A golgin A8 family member A 2 10
MIRT476318 GM2A GM2 ganglioside activator 2 2
MIRT476676 FUT11 fucosyltransferase 11 2 10
MIRT478368 DDI2 DNA damage inducible 1 homolog 2 2 2
MIRT479545 CDC5L cell division cycle 5 like 2 2
MIRT481024 BAZ2B bromodomain adjacent to zinc finger domain 2B 2 2
MIRT491009 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT493168 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT494345 CASKIN1 CASK interacting protein 1 2 2
MIRT499087 ZDHHC21 zinc finger DHHC-type containing 21 2 6
MIRT500029 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501298 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 4
MIRT503124 BCL11B B-cell CLL/lymphoma 11B 2 8
MIRT503301 GTF2A1 general transcription factor IIA subunit 1 2 6
MIRT504328 ASGR2 asialoglycoprotein receptor 2 2 6
MIRT504471 EID2B EP300 interacting inhibitor of differentiation 2B 2 2
MIRT504655 RPL9 ribosomal protein L9 2 6
MIRT505331 TMF1 TATA element modulatory factor 1 2 8
MIRT505732 SERTAD3 SERTA domain containing 3 2 4
MIRT505827 RSBN1 round spermatid basic protein 1 2 8
MIRT506004 PURG purine rich element binding protein G 2 8
MIRT506308 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 2 6
MIRT506806 KLHL15 kelch like family member 15 2 6
MIRT507119 GOLGA8B golgin A8 family member B 2 6
MIRT507353 FAM129A family with sequence similarity 129 member A 2 6
MIRT507591 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT507674 CPEB4 cytoplasmic polyadenylation element binding protein 4 2 4
MIRT507703 CNOT2 CCR4-NOT transcription complex subunit 2 2 8
MIRT508012 BCAT1 branched chain amino acid transaminase 1 2 4
MIRT510439 ZIC5 Zic family member 5 2 6
MIRT510539 XKR7 XK related 7 2 4
MIRT510600 TPPP tubulin polymerization promoting protein 2 6
MIRT511060 NRAS NRAS proto-oncogene, GTPase 2 4
MIRT511855 GOLGA8J golgin A8 family member J 2 6
MIRT511865 GOLGA8I golgin A8 family member I, pseudogene 1 3
MIRT512570 CTDSPL CTD small phosphatase like 2 2
MIRT512708 ZNF134 zinc finger protein 134 2 6
MIRT513177 MOAP1 modulator of apoptosis 1 2 6
MIRT513783 PAWR pro-apoptotic WT1 regulator 2 6
MIRT515099 IRGQ immunity related GTPase Q 2 2
MIRT515481 INCENP inner centromere protein 2 4
MIRT517416 BMP8A bone morphogenetic protein 8a 2 2
MIRT518754 C1orf35 chromosome 1 open reading frame 35 2 2
MIRT519780 ZNF354B zinc finger protein 354B 2 4
MIRT519865 ZFP62 ZFP62 zinc finger protein 2 6
MIRT520510 TRAM2 translocation associated membrane protein 2 2 6
MIRT521068 SLC25A32 solute carrier family 25 member 32 2 6
MIRT526912 ZNF772 zinc finger protein 772 2 6
MIRT527134 GULP1 GULP, engulfment adaptor PTB domain containing 1 2 2
MIRT527867 SLC39A14 solute carrier family 39 member 14 2 2
MIRT528404 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT532956 ZNF24 zinc finger protein 24 2 4
MIRT533021 ZFC3H1 zinc finger C3H1-type containing 2 4
MIRT533191 WASL Wiskott-Aldrich syndrome like 2 6
MIRT534191 SLC7A11 solute carrier family 7 member 11 2 2
MIRT534961 PTAR1 protein prenyltransferase alpha subunit repeat containing 1 2 4
MIRT536396 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT537046 GRAMD4 GRAM domain containing 4 2 2
MIRT537125 GOLGA3 golgin A3 2 4
MIRT537183 GFPT2 glutamine-fructose-6-phosphate transaminase 2 2 4
MIRT537652 ERGIC2 ERGIC and golgi 2 2 4
MIRT538632 CCSER2 coiled-coil serine rich protein 2 2 4
MIRT539231 ANP32E acidic nuclear phosphoprotein 32 family member E 2 6
MIRT540099 NPY4R neuropeptide Y receptor Y4 2 2
MIRT540998 ZNF460 zinc finger protein 460 2 4
MIRT541468 AURKA aurora kinase A 2 2
MIRT542680 SESN3 sestrin 3 2 2
MIRT542757 PRRG4 proline rich and Gla domain 4 2 2
MIRT542863 NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 2 2
MIRT542925 HOXC8 homeobox C8 2 2
MIRT543747 SZRD1 SUZ RNA binding domain containing 1 2 2
MIRT544404 ZSCAN12 zinc finger and SCAN domain containing 12 2 2
MIRT544583 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 4
MIRT544662 MED19 mediator complex subunit 19 2 2
MIRT545251 GTF2E1 general transcription factor IIE subunit 1 2 2
MIRT545261 TRIM36 tripartite motif containing 36 2 4
MIRT545744 UHRF1BP1 UHRF1 binding protein 1 2 2
MIRT545999 WDR81 WD repeat domain 81 2 2
MIRT546038 VPS4B vacuolar protein sorting 4 homolog B 2 2
MIRT547170 PDZD8 PDZ domain containing 8 2 2
MIRT547273 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT547729 KIF5B kinesin family member 5B 2 2
MIRT548127 GATA6 GATA binding protein 6 2 2
MIRT548203 FNIP1 folliculin interacting protein 1 2 2
MIRT548756 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT549641 ZNF75A zinc finger protein 75a 2 2
MIRT549684 ZNF598 zinc finger protein 598 2 2
MIRT550197 MRO maestro 2 2
MIRT550340 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT550536 MYZAP myocardial zonula adherens protein 2 2
MIRT550975 TOR4A torsin family 4 member A 2 2
MIRT551221 CIDEC cell death inducing DFFA like effector c 2 2
MIRT551355 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT551571 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT552277 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552661 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT553081 UCK2 uridine-cytidine kinase 2 2 2
MIRT553753 TBC1D8 TBC1 domain family member 8 2 2
MIRT554030 SPCS3 signal peptidase complex subunit 3 2 2
MIRT554099 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT554155 SLX4 SLX4 structure-specific endonuclease subunit 2 2
MIRT554815 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT555522 PMEPA1 prostate transmembrane protein, androgen induced 1 2 2
MIRT555597 PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma 2 2
MIRT555632 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 4
MIRT555679 PGAM4 phosphoglycerate mutase family member 4 2 4
MIRT555827 PAX9 paired box 9 2 2
MIRT555868 PAIP1 poly(A) binding protein interacting protein 1 2 2
MIRT555939 NUP43 nucleoporin 43 2 2
MIRT555994 NFYB nuclear transcription factor Y subunit beta 2 2
MIRT556340 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT556432 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT556585 LHFPL2 LHFPL tetraspan subfamily member 2 2 4
MIRT556801 KIAA1958 KIAA1958 2 2
MIRT558047 EXOC5 exocyst complex component 5 2 2
MIRT558697 CLTA clathrin light chain A 2 2
MIRT559191 BMPR1A bone morphogenetic protein receptor type 1A 2 4
MIRT559639 AKAP10 A-kinase anchoring protein 10 2 2
MIRT559707 AEN apoptosis enhancing nuclease 2 2
MIRT560673 SRFBP1 serum response factor binding protein 1 2 2
MIRT560990 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT562170 HOXA13 homeobox A13 2 2
MIRT562275 GNAQ G protein subunit alpha q 2 2
MIRT563624 ZNF277 zinc finger protein 277 2 2
MIRT563815 FMN1 formin 1 2 2
MIRT564096 TLR3 toll like receptor 3 2 2
MIRT565320 TMEM41A transmembrane protein 41A 2 2
MIRT565986 RNF44 ring finger protein 44 2 2
MIRT566047 REV3L REV3 like, DNA directed polymerase zeta catalytic subunit 2 2
MIRT568236 C11orf24 chromosome 11 open reading frame 24 2 2
MIRT568310 BAK1 BCL2 antagonist/killer 1 2 2
MIRT572376 ATOX1 antioxidant 1 copper chaperone 2 2
MIRT574822 CPEB3 cytoplasmic polyadenylation element binding protein 3 2 2
MIRT609212 PELP1 proline, glutamate and leucine rich protein 1 2 2
MIRT616217 RBM27 RNA binding motif protein 27 2 2
MIRT629087 FASLG Fas ligand 2 2
MIRT632124 FKBP9 FK506 binding protein 9 2 2
MIRT632576 POLQ DNA polymerase theta 2 2
MIRT634799 ENTHD1 ENTH domain containing 1 2 2
MIRT636553 ESRP1 epithelial splicing regulatory protein 1 2 2
MIRT640977 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT653875 SH2B3 SH2B adaptor protein 3 2 2
MIRT655598 OTUD7B OTU deubiquitinase 7B 2 2
MIRT659764 CCDC171 coiled-coil domain containing 171 2 2
MIRT660744 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT681037 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT682305 RBM28 RNA binding motif protein 28 2 2
MIRT682573 EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 2 2
MIRT686217 ZNF267 zinc finger protein 267 2 2
MIRT687209 PLXNA3 plexin A3 2 2
MIRT690630 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT692419 AGMAT agmatinase 2 2
MIRT694437 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT700725 PNO1 partner of NOB1 homolog 2 2
MIRT701549 NARF nuclear prelamin A recognition factor 2 2
MIRT704379 DAND5 DAN domain BMP antagonist family member 5 2 2
MIRT707935 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 2
MIRT709939 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT711371 MED7 mediator complex subunit 7 2 2
MIRT712327 PER2 period circadian clock 2 2 2
MIRT714515 SHE Src homology 2 domain containing E 2 2
MIRT715520 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT724294 OSMR oncostatin M receptor 2 2
MIRT725358 MUC21 mucin 21, cell surface associated 2 2
MIRT732242 KLF4 Kruppel like factor 4 3 1
MIRT735384 SPAG5 sperm associated antigen 5 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-367 Medpor NULL NULL Microarray osteoblast-like cells line (MG-63) 18408260 2008 up-regulated
miR-367 Activin A NULL 229455 Quantitative real-time PCR Human embryonic stem (hES) cells 19885849 2010 up-regulated
miR-367 Mistletoe lectin-I NULL NULL Microarray colorectal cancer cells CLY cells 20955366 2011 down-regulated
miR-367 Doxorubicin approved 31703 Quantitative real-time PCR heart 22859947 2012 up-regulated
miR-367 Paclitaxel approved 36314 Microarray Ovarian cancer cell lines 24220856 2014 up-regulated
miR-367 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-367 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Siop Treatment Protocol sensitive High Nephroblastoma tissue
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved resistant High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved sensitive High Hepatocellular Carcinoma tissue and cell line (HepG2)
hsa-miR-367-3p Mitoxantrone 4212 NSC279836 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Sorafenib 216239 NSC747971 approved sensitive Low Hepatocellular Carcinoma cell line (SKhep1, HA22T)
hsa-miR-367-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM16)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-367-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved resistant cell line (IGROV-1)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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