pre-miRNA Information
pre-miRNA hsa-mir-4524a   
Genomic Coordinates chr17: 69099564 - 69099632
Description Homo sapiens miR-4524a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4524a-5p
Sequence 6| AUAGCAGCAUGAACCUGUCUCA |27
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1322445998 8 dbSNP
rs1350790266 13 dbSNP
rs1263495678 21 dbSNP
Putative Targets

Gene Information
Gene Symbol OSCAR   
Synonyms PIGR3, PIgR-3
Description osteoclast associated, immunoglobulin-like receptor
Transcript NM_206818   
Other Transcripts NM_133168 , NM_133169 , NM_130771   
Expression
Putative miRNA Targets on OSCAR
3'UTR of OSCAR
(miRNA target sites are highlighted)
>OSCAR|NM_206818|3'UTR
   1 TCCTCCAGCTCCTCCTCCCTCAGACCCAGGATTCCCGGGCCCCAGTACCTCCTCCCTCAGACCCAGGACTCCAGGCCCCC
  81 AGCCCCTCCTTCCTGGACCCAGGACTCCAGGCCCCCAGCCCCTCCTTCCTGATCCAGCAGTCCAGGCCCCAGCCCCTTCT
 161 TCCTGGACCCAGGAGTTGAAGCCTCCATCGACTCCCCCTCAACTTTGAGACTGTAGAGTCAGGTCCCTAAGTCCACCCCA
 241 GGGGCTGGAAACCTGGAGTTCAGGGCCCAGACTTTGGGGTCCGGGAGCTGATGGCCCCTCTCTCCCGGCTCCGCCCGCAG
 321 ACTCTGGCTCCTCCGACTACACCCGGGGGAACCTAGTCCGCCTGGGGCTGGCCGGGCTGGTCCTCATCTCCCTGGGCGCG
 401 CTGGTCACTTTTGACTGGCGCAGTCAGAACCGCGCTCCTGCTGGTATCCGCCCCTGAGCCCCAGGAGCACTGCAGCCCGA
 481 GACTTCCAACCTGAGTGGCGGAGAAGCTGGGACCCTGGGCTGGACTGTCCTTTCCTGCAGCCCCACAGTCCTGCTGGCTG
 561 AGCTCCGCGGAACGGTCCTTAGACCCCGCTGTGCCCTGTGCTGTAGCTTCTTTCCAGGCCTTTCCCAAGGAGTAGCTGAA
 641 AGGAAGACGCGATTAGTGGTTAAGACTTCCAAGCCAGAAGACAGAGGGTTCGAATCCCAGCACTGCCGTCTACTCACTGT
 721 AGTAGTAGCAGCTACAGAAAGGTAGTAGTGAGACGTGAAGCCAGCTGGACTTCCTGGGTTGAATGGGGACCTGGAGAACT
 801 TTTCTGTCTTACAAGAGGATTGTAAAATGGACCAATCAGCACTCTGTAAGATGGACCAATCAGCGCTCTGTAAAATGGAC
 881 CAATCAGCAGGACACGGGCGGGGACAATAAGGGAATAAAAGCTGGCGAGCGCGGCACCCCACCAGAGTCTGCTTCCACGT
 961 TGTGGGAGCTTTGTTCTCTTGCTCTACACAATAAATCTTGCTGCTGCTAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acUCUGUCCAAGUACGACGAUa 5'
            | | |  ||  |||||||| 
Target 5' caATAAATCTTGCTGCTGCTAa 3'
989 - 1010 152.00 -10.50
2
miRNA  3' acUCU--GUCCAAGUACGACGAUa 5'
            |||  |: | || ||||| || 
Target 5' tcAGAACCGCGCTCCTGCTGGTAt 3'
424 - 447 130.00 -10.30
3
miRNA  3' acucUGUCCAAGUACGA-CGAUa 5'
              ||||  || |||| |||: 
Target 5' ccccACAG--TCCTGCTGGCTGa 3'
541 - 561 114.00 -10.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30142655 190 COSMIC
COSM6200805 317 COSMIC
COSM5684103 320 COSMIC
COSM8960193 324 COSMIC
COSM9341493 333 COSMIC
COSM6389375 339 COSMIC
COSM8891743 345 COSMIC
COSM9654285 348 COSMIC
COSM4638254 349 COSMIC
COSM7785453 352 COSMIC
COSM5494012 360 COSMIC
COSM1712769 365 COSMIC
COSM5555007 374 COSMIC
COSM7381967 380 COSMIC
COSM9298619 390 COSMIC
COSM7808994 391 COSMIC
COSM7208978 395 COSMIC
COSM4507374 397 COSMIC
COSM9565500 399 COSMIC
COSM7671477 406 COSMIC
COSM7825603 406 COSMIC
COSM7960655 406 COSMIC
COSM8315957 409 COSMIC
COSM7463283 419 COSMIC
COSM1729215 420 COSMIC
COSM1481468 427 COSMIC
COSM4508480 430 COSMIC
COSM87444 432 COSMIC
COSM8456217 433 COSMIC
COSM9598333 437 COSMIC
COSM4791111 449 COSMIC
COSM6558271 450 COSMIC
COSM8452871 457 COSMIC
COSN30475703 460 COSMIC
COSN31491717 479 COSMIC
COSN30490785 489 COSMIC
COSN30117111 490 COSMIC
COSN30107661 491 COSMIC
COSN20079441 499 COSMIC
COSN30175954 500 COSMIC
COSN30179718 514 COSMIC
COSN30517069 520 COSMIC
COSN30529385 527 COSMIC
COSN31495318 530 COSMIC
COSN26440394 567 COSMIC
COSN30109748 621 COSMIC
COSN16153193 648 COSMIC
COSN31532843 649 COSMIC
COSN30144299 650 COSMIC
COSN30533128 650 COSMIC
COSN22098469 659 COSMIC
COSN30533855 691 COSMIC
COSN25769540 741 COSMIC
COSN9852287 833 COSMIC
COSN27730140 944 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1435972458 1 dbSNP
rs946973521 2 dbSNP
rs1351104461 3 dbSNP
rs1258475852 5 dbSNP
rs1166910784 9 dbSNP
rs1469387035 10 dbSNP
rs755216351 10 dbSNP
rs911372216 11 dbSNP
rs587692968 12 dbSNP
rs1468320962 14 dbSNP
rs587615216 15 dbSNP
rs1243681020 16 dbSNP
rs1049946385 17 dbSNP
rs1419945350 23 dbSNP
rs587762621 24 dbSNP
rs587664790 30 dbSNP
rs1258057192 32 dbSNP
rs1213125445 38 dbSNP
rs1482085483 39 dbSNP
rs1272595360 40 dbSNP
rs1215417584 42 dbSNP
rs1341712178 43 dbSNP
rs1438621039 44 dbSNP
rs1341493329 45 dbSNP
rs1282858360 46 dbSNP
rs1297348501 47 dbSNP
rs1356666918 48 dbSNP
rs1283088368 54 dbSNP
rs1235523593 58 dbSNP
rs1376592547 60 dbSNP
rs1433292021 64 dbSNP
rs1219972108 69 dbSNP
rs143751107 76 dbSNP
rs1320739964 84 dbSNP
rs972727048 87 dbSNP
rs1165834471 95 dbSNP
rs777826569 96 dbSNP
rs1417234480 98 dbSNP
rs939997732 99 dbSNP
rs1460516659 100 dbSNP
rs1172395732 101 dbSNP
rs1441136162 103 dbSNP
rs1296097351 105 dbSNP
rs1387942713 112 dbSNP
rs1302349866 117 dbSNP
rs777597319 119 dbSNP
rs1473073443 122 dbSNP
rs1227142043 123 dbSNP
rs1275667887 124 dbSNP
rs1308462766 131 dbSNP
rs1204188979 132 dbSNP
rs1461043913 132 dbSNP
rs984024430 132 dbSNP
rs1360867148 133 dbSNP
rs1272930304 134 dbSNP
rs1174162651 138 dbSNP
rs1418972431 140 dbSNP
rs1486811161 142 dbSNP
rs1378288949 148 dbSNP
rs1180209058 151 dbSNP
rs970396404 156 dbSNP
rs1256952517 159 dbSNP
rs1471822751 164 dbSNP
rs756113977 168 dbSNP
rs1188219435 172 dbSNP
rs1420057261 176 dbSNP
rs1409296017 182 dbSNP
rs1419319884 185 dbSNP
rs1372382582 189 dbSNP
rs1255034964 199 dbSNP
rs1434987399 199 dbSNP
rs1022733853 202 dbSNP
rs1186478920 205 dbSNP
rs1432221597 207 dbSNP
rs12459998 210 dbSNP
rs375647043 214 dbSNP
rs992656478 215 dbSNP
rs1363359898 216 dbSNP
rs1214485323 218 dbSNP
rs752463991 219 dbSNP
rs1350464653 225 dbSNP
rs1211892945 226 dbSNP
rs959781154 227 dbSNP
rs1250155094 237 dbSNP
rs1440775927 240 dbSNP
rs1031346297 242 dbSNP
rs1242760145 243 dbSNP
rs1475069159 252 dbSNP
rs1186559176 254 dbSNP
rs1451178218 254 dbSNP
rs1454516276 259 dbSNP
rs1287781139 262 dbSNP
rs587710821 265 dbSNP
rs1211661635 272 dbSNP
rs1315287410 278 dbSNP
rs1416113883 279 dbSNP
rs1352220441 282 dbSNP
rs1327568722 283 dbSNP
rs1410239730 286 dbSNP
rs1357707668 287 dbSNP
rs1162530977 293 dbSNP
rs1474724243 295 dbSNP
rs1418511233 300 dbSNP
rs1189924840 302 dbSNP
rs1471549907 304 dbSNP
rs749090701 305 dbSNP
rs756628898 306 dbSNP
rs1319084671 308 dbSNP
rs904161837 309 dbSNP
rs754392342 311 dbSNP
rs1439846891 312 dbSNP
rs376083076 313 dbSNP
rs1274461793 315 dbSNP
rs750760600 317 dbSNP
rs767886367 319 dbSNP
rs1295688047 320 dbSNP
rs1421599103 323 dbSNP
rs587647466 328 dbSNP
rs890064459 330 dbSNP
rs1373221394 331 dbSNP
rs1278510507 332 dbSNP
rs1442214997 333 dbSNP
rs751883744 334 dbSNP
rs764380820 335 dbSNP
rs763193258 336 dbSNP
rs8106130 339 dbSNP
rs1166795604 341 dbSNP
rs201324161 342 dbSNP
rs368286297 344 dbSNP
rs746784561 345 dbSNP
rs779867217 345 dbSNP
rs183518925 346 dbSNP
rs1471169480 347 dbSNP
rs1435269313 349 dbSNP
rs1193199277 350 dbSNP
rs771704591 352 dbSNP
rs372803111 358 dbSNP
rs778422626 359 dbSNP
rs756613333 360 dbSNP
rs202061457 367 dbSNP
rs781533449 368 dbSNP
rs940110843 373 dbSNP
rs757736089 374 dbSNP
rs1439768026 375 dbSNP
rs1371257183 376 dbSNP
rs984550548 378 dbSNP
rs757606507 380 dbSNP
rs1442263644 385 dbSNP
rs751216176 390 dbSNP
rs1395690094 392 dbSNP
rs764470656 394 dbSNP
rs763211885 396 dbSNP
rs915870054 397 dbSNP
rs752722355 398 dbSNP
rs765318712 400 dbSNP
rs1166580108 403 dbSNP
rs1454916241 405 dbSNP
rs1255046878 407 dbSNP
rs759412689 408 dbSNP
rs368455538 410 dbSNP
rs770738281 412 dbSNP
rs760526894 416 dbSNP
rs148850642 419 dbSNP
rs771722966 420 dbSNP
rs747761316 423 dbSNP
rs1348163883 428 dbSNP
rs959834595 430 dbSNP
rs778311851 431 dbSNP
rs768264740 432 dbSNP
rs1360963507 433 dbSNP
rs1289199188 434 dbSNP
rs1432868498 441 dbSNP
rs1231886249 443 dbSNP
rs748720772 449 dbSNP
rs781756809 450 dbSNP
rs1435354594 451 dbSNP
rs1417923197 452 dbSNP
rs1397141997 453 dbSNP
rs1345698127 458 dbSNP
rs1168550572 461 dbSNP
rs1163141654 462 dbSNP
rs1428105732 465 dbSNP
rs757827661 467 dbSNP
rs1390559176 470 dbSNP
rs373783777 473 dbSNP
rs778218874 475 dbSNP
rs1209550255 476 dbSNP
rs192551097 477 dbSNP
rs752913292 478 dbSNP
rs1224838717 479 dbSNP
rs765354807 486 dbSNP
rs1245158494 499 dbSNP
rs200298013 500 dbSNP
rs1216106420 503 dbSNP
rs1356137783 505 dbSNP
rs977175108 507 dbSNP
rs968896526 512 dbSNP
rs1341214376 519 dbSNP
rs1196225100 525 dbSNP
rs1021279192 527 dbSNP
rs1481896719 529 dbSNP
rs1337141528 549 dbSNP
rs1294002274 550 dbSNP
rs587684228 552 dbSNP
rs1218080663 553 dbSNP
rs1007673232 557 dbSNP
rs1474565327 561 dbSNP
rs1187472649 564 dbSNP
rs187702102 566 dbSNP
rs587752307 569 dbSNP
rs750901184 572 dbSNP
rs73609085 573 dbSNP
rs1275771861 585 dbSNP
rs1310655546 586 dbSNP
rs1328186575 587 dbSNP
rs901310622 588 dbSNP
rs1389770166 590 dbSNP
rs1296648866 602 dbSNP
rs1339753178 617 dbSNP
rs1212602237 627 dbSNP
rs1291530996 631 dbSNP
rs765632315 634 dbSNP
rs1280525095 642 dbSNP
rs1037218774 648 dbSNP
rs1198300668 649 dbSNP
rs940100399 650 dbSNP
rs888555020 651 dbSNP
rs1194483375 653 dbSNP
rs1389982324 660 dbSNP
rs1447992552 666 dbSNP
rs1175774819 667 dbSNP
rs1395989670 671 dbSNP
rs762806046 673 dbSNP
rs1418052060 677 dbSNP
rs1048389116 684 dbSNP
rs1301219602 684 dbSNP
rs376880792 686 dbSNP
rs1382736120 687 dbSNP
rs915922506 691 dbSNP
rs1422158237 692 dbSNP
rs117829349 707 dbSNP
rs938619257 710 dbSNP
rs1436593877 711 dbSNP
rs924429268 714 dbSNP
rs977688359 725 dbSNP
rs1267114538 732 dbSNP
rs1311313219 737 dbSNP
rs587659700 741 dbSNP
rs968490375 748 dbSNP
rs1485886333 752 dbSNP
rs914344894 754 dbSNP
rs182978328 755 dbSNP
rs777122419 757 dbSNP
rs952990208 761 dbSNP
rs1030015335 765 dbSNP
rs764620326 770 dbSNP
rs1175127934 771 dbSNP
rs1174170313 773 dbSNP
rs965639988 782 dbSNP
rs1365623355 786 dbSNP
rs192893603 788 dbSNP
rs1271950230 789 dbSNP
rs752619471 791 dbSNP
rs760916529 794 dbSNP
rs1228100511 805 dbSNP
rs1004820679 807 dbSNP
rs1326391942 811 dbSNP
rs1366609644 812 dbSNP
rs374007136 813 dbSNP
rs1048926599 814 dbSNP
rs1174520836 830 dbSNP
rs1013018876 833 dbSNP
rs1227175897 835 dbSNP
rs1298937180 836 dbSNP
rs1327760399 841 dbSNP
rs1216062381 842 dbSNP
rs1266436830 850 dbSNP
rs1478435254 852 dbSNP
rs1442812281 860 dbSNP
rs775033384 864 dbSNP
rs1415933358 865 dbSNP
rs587730321 865 dbSNP
rs587677995 874 dbSNP
rs775872033 876 dbSNP
rs1409826434 878 dbSNP
rs1180708037 886 dbSNP
rs1330231550 889 dbSNP
rs772144899 892 dbSNP
rs140133395 895 dbSNP
rs1057083624 897 dbSNP
rs1373695485 899 dbSNP
rs749952619 899 dbSNP
rs1408812695 900 dbSNP
rs1285957915 911 dbSNP
rs924566611 912 dbSNP
rs1356770926 920 dbSNP
rs1235702923 921 dbSNP
rs1291140455 922 dbSNP
rs1398051262 923 dbSNP
rs1041550135 927 dbSNP
rs587726496 930 dbSNP
rs914419654 931 dbSNP
rs145958550 932 dbSNP
rs377228833 933 dbSNP
rs1182390569 934 dbSNP
rs1280374525 935 dbSNP
rs1421984376 936 dbSNP
rs1219448909 937 dbSNP
rs769602531 938 dbSNP
rs922911696 939 dbSNP
rs587716882 940 dbSNP
rs1428739081 941 dbSNP
rs975773155 941 dbSNP
rs965609746 942 dbSNP
rs1253926068 943 dbSNP
rs1285935429 945 dbSNP
rs188505467 945 dbSNP
rs1351034711 946 dbSNP
rs587630819 947 dbSNP
rs1302129856 948 dbSNP
rs587763537 949 dbSNP
rs1004477237 951 dbSNP
rs952965434 952 dbSNP
rs1272681552 954 dbSNP
rs587701596 955 dbSNP
rs1027175245 957 dbSNP
rs748146111 958 dbSNP
rs894593363 959 dbSNP
rs118027525 960 dbSNP
rs1390582940 961 dbSNP
rs1002869905 962 dbSNP
rs868434259 964 dbSNP
rs1344293179 965 dbSNP
rs183018316 966 dbSNP
rs1411450264 967 dbSNP
rs1041990111 968 dbSNP
rs1446506514 969 dbSNP
rs754781137 976 dbSNP
rs117050289 978 dbSNP
rs372909449 981 dbSNP
rs1278042085 982 dbSNP
rs758108828 983 dbSNP
rs1217875057 984 dbSNP
rs1248497220 986 dbSNP
rs1186503619 987 dbSNP
rs1472055078 988 dbSNP
rs1239550029 989 dbSNP
rs1422474453 990 dbSNP
rs587764709 991 dbSNP
rs1162013043 1007 dbSNP
rs149488904 1011 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545214. RNA binding protein: AGO3. Condition:Control PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection PAR-CLIP data was present in GSM545217. RNA binding protein: AGO2. Condition:miR-7 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 126014.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM545214
Method / RBP PAR-CLIP / AGO3
Cell line / Condition HEK293 / Control
Location of target site ENST00000391761.1 | 3UTR | CAAUAAAUCUUGCUGCUGCUAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000391761.1 | 3UTR | CAAUAAAUCUUGCUGCUGCUAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM545217
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-7 transfection
Location of target site ENST00000391761.1 | 3UTR | CAAUAAAUCUUGCUGCUGCUAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000391761.1 | 3UTR | CUCUACACAAUAAAUCUUGCUGCUGCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
180 hsa-miR-4524a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055251 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT055826 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT060573 CCND1 cyclin D1 2 2
MIRT061013 C1ORF21 chromosome 1 open reading frame 21 2 6
MIRT064694 CCND2 cyclin D2 2 4
MIRT075268 SNTB2 syntrophin beta 2 2 4
MIRT079668 NAPG NSF attachment protein gamma 2 12
MIRT081651 CCNE1 cyclin E1 2 4
MIRT082996 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT083463 RALGAPB Ral GTPase activating protein non-catalytic beta subunit 2 4
MIRT085755 RIF1 replication timing regulatory factor 1 2 2
MIRT086022 UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 2 2
MIRT087431 ZNRF3 zinc and ring finger 3 2 2
MIRT088786 SOCS5 suppressor of cytokine signaling 5 2 2
MIRT089221 ACTR2 ARP2 actin related protein 2 homolog 2 2
MIRT093696 PI4K2B phosphatidylinositol 4-kinase type 2 beta 2 6
MIRT095090 SEC24A SEC24 homolog A, COPII coat complex component 2 4
MIRT096249 CANX calnexin 2 2
MIRT100215 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 2 2
MIRT100746 VEGFA vascular endothelial growth factor A 2 12
MIRT100904 CD2AP CD2 associated protein 2 2
MIRT102647 UBN2 ubinuclein 2 2 10
MIRT103882 FOXK1 forkhead box K1 2 2
MIRT104246 DMTF1 cyclin D binding myb like transcription factor 1 2 2
MIRT106310 ZFHX4 zinc finger homeobox 4 2 6
MIRT107696 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT114943 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT117671 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT133799 SKI SKI proto-oncogene 2 2
MIRT140167 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT142279 DCTN5 dynactin subunit 5 2 8
MIRT143288 N4BP1 NEDD4 binding protein 1 2 2
MIRT165939 CREBRF CREB3 regulatory factor 2 2
MIRT175251 PSAT1 phosphoserine aminotransferase 1 2 6
MIRT186381 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT191470 PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A 2 2
MIRT196480 TAOK1 TAO kinase 1 2 2
MIRT201470 SNRPB2 small nuclear ribonucleoprotein polypeptide B2 2 8
MIRT204615 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 8
MIRT204646 MOB4 MOB family member 4, phocein 2 8
MIRT204749 BZW1 basic leucine zipper and W2 domains 1 2 12
MIRT206031 NUP50 nucleoporin 50 2 6
MIRT211196 FGF2 fibroblast growth factor 2 2 4
MIRT229353 ZNF449 zinc finger protein 449 2 2
MIRT247138 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT249461 ZNF691 zinc finger protein 691 2 4
MIRT256314 CDC42SE2 CDC42 small effector 2 2 2
MIRT258419 WIPI2 WD repeat domain, phosphoinositide interacting 2 2 2
MIRT265083 CHEK1 checkpoint kinase 1 2 2
MIRT270561 SETD1B SET domain containing 1B 2 2
MIRT274749 RAB3IP RAB3A interacting protein 2 2
MIRT277515 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 4
MIRT289642 CBX2 chromobox 2 2 2
MIRT301001 MTMR3 myotubularin related protein 3 2 2
MIRT307149 CTDSPL CTD small phosphatase like 2 4
MIRT309021 USP53 ubiquitin specific peptidase 53 2 2
MIRT314100 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 2 8
MIRT319338 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT320619 ZNRF2 zinc and ring finger 2 2 2
MIRT324285 LURAP1L leucine rich adaptor protein 1 like 2 2
MIRT446498 ASCC1 activating signal cointegrator 1 complex subunit 1 2 2
MIRT448437 TLL1 tolloid like 1 2 2
MIRT461537 ACTR3B ARP3 actin related protein 3 homolog B 2 2
MIRT463162 ZNF367 zinc finger protein 367 2 10
MIRT463493 ZC3H10 zinc finger CCCH-type containing 10 2 2
MIRT465154 TSC22D2 TSC22 domain family member 2 2 2
MIRT466418 TFAP2A transcription factor AP-2 alpha 2 8
MIRT468278 SFT2D2 SFT2 domain containing 2 2 2
MIRT469399 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT471941 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT473688 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT479618 CDC25A cell division cycle 25A 2 2
MIRT482098 AKT3 AKT serine/threonine kinase 3 2 4
MIRT483995 ATAD5 ATPase family, AAA domain containing 5 2 12
MIRT485205 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 8
MIRT498763 C3orf38 chromosome 3 open reading frame 38 2 8
MIRT498961 ORC4 origin recognition complex subunit 4 2 8
MIRT499440 ODF2L outer dense fiber of sperm tails 2 like 2 8
MIRT500080 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 8
MIRT500305 ZNF622 zinc finger protein 622 2 8
MIRT500410 ZMAT3 zinc finger matrin-type 3 2 8
MIRT500789 TLK1 tousled like kinase 1 2 6
MIRT500930 SRPR SRP receptor alpha subunit 2 6
MIRT500943 SREK1 splicing regulatory glutamic acid and lysine rich protein 1 2 8
MIRT501068 SMAD7 SMAD family member 7 2 8
MIRT501711 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT502627 DDX3X DEAD-box helicase 3, X-linked 2 8
MIRT502910 CDCA4 cell division cycle associated 4 2 8
MIRT502935 CDC37L1 cell division cycle 37 like 1 2 8
MIRT504531 ZNF620 zinc finger protein 620 2 6
MIRT505106 YTHDC1 YTH domain containing 1 2 6
MIRT505337 TMEM245 transmembrane protein 245 2 6
MIRT505383 TMEM100 transmembrane protein 100 2 2
MIRT505678 SESTD1 SEC14 and spectrin domain containing 1 2 6
MIRT506157 PLAG1 PLAG1 zinc finger 2 8
MIRT506183 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 6
MIRT506475 MYO5A myosin VA 2 6
MIRT506826 KIF23 kinesin family member 23 2 6
MIRT507160 GAS2L3 growth arrest specific 2 like 3 2 2
MIRT507511 DYNLL2 dynein light chain LC8-type 2 2 4
MIRT507845 CCNE2 cyclin E2 2 6
MIRT510403 ZNF507 zinc finger protein 507 2 2
MIRT518078 TRIM35 tripartite motif containing 35 2 2
MIRT518982 NNT nicotinamide nucleotide transhydrogenase 2 4
MIRT521045 SLC2A3 solute carrier family 2 member 3 2 4
MIRT521190 SBNO1 strawberry notch homolog 1 2 6
MIRT522088 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT524846 ARPP19 cAMP regulated phosphoprotein 19 2 2
MIRT527787 TMEM44 transmembrane protein 44 2 4
MIRT537803 EFNB2 ephrin B2 2 4
MIRT540830 GNAT1 G protein subunit alpha transducin 1 2 4
MIRT541140 PISD phosphatidylserine decarboxylase 2 2
MIRT541419 CBX4 chromobox 4 2 2
MIRT543517 PRSS21 protease, serine 21 2 2
MIRT543824 GSG1 germ cell associated 1 2 2
MIRT544959 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 2
MIRT545179 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 4
MIRT545335 CCDC83 coiled-coil domain containing 83 2 2
MIRT545518 RSL24D1 ribosomal L24 domain containing 1 2 2
MIRT545670 DECR1 2,4-dienoyl-CoA reductase 1 2 2
MIRT545931 ZBTB44 zinc finger and BTB domain containing 44 2 4
MIRT546102 USP48 ubiquitin specific peptidase 48 2 4
MIRT546598 SALL1 spalt like transcription factor 1 2 4
MIRT546626 RTN4 reticulon 4 2 2
MIRT547651 KPNA3 karyopherin subunit alpha 3 2 2
MIRT547987 HCFC2 host cell factor C2 2 4
MIRT548717 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT548931 CDK17 cyclin dependent kinase 17 2 2
MIRT549067 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT549266 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT550460 OSCAR osteoclast associated, immunoglobulin-like receptor 2 4
MIRT550806 FAM229B family with sequence similarity 229 member B 2 2
MIRT552024 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT552334 ZNF704 zinc finger protein 704 2 2
MIRT552732 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT553795 SZRD1 SUZ RNA binding domain containing 1 2 4
MIRT554694 RNF149 ring finger protein 149 2 2
MIRT555133 PTPRD protein tyrosine phosphatase, receptor type D 2 2
MIRT555264 PRDM4 PR/SET domain 4 2 2
MIRT556848 KANK1 KN motif and ankyrin repeat domains 1 2 4
MIRT557474 GPR27 G protein-coupled receptor 27 2 4
MIRT558018 EXT1 exostosin glycosyltransferase 1 2 2
MIRT558498 CYP26B1 cytochrome P450 family 26 subfamily B member 1 2 4
MIRT558579 CREBL2 cAMP responsive element binding protein like 2 2 4
MIRT558610 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT558650 CNKSR3 CNKSR family member 3 2 2
MIRT558986 CA8 carbonic anhydrase 8 2 2
MIRT559141 BTN3A3 butyrophilin subfamily 3 member A3 2 2
MIRT559327 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 2 2
MIRT562021 LANCL1 LanC like 1 2 2
MIRT562869 KIAA1456 KIAA1456 2 2
MIRT563074 SLC25A12 solute carrier family 25 member 12 2 2
MIRT563496 DLGAP3 DLG associated protein 3 2 2
MIRT563890 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 2
MIRT564311 CCNT1 cyclin T1 2 2
MIRT564942 XKR7 XK related 7 2 2
MIRT564979 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT565423 TEF TEF, PAR bZIP transcription factor 2 2
MIRT566824 MAP3K7 mitogen-activated protein kinase kinase kinase 7 2 2
MIRT571961 KIF5B kinesin family member 5B 2 2
MIRT575877 Cask calcium/calmodulin-dependent serine protein kinase (MAGUK family) 2 3
MIRT576523 Txlna taxilin alpha 2 2
MIRT614693 TRAK1 trafficking kinesin protein 1 2 2
MIRT616065 ZC3H14 zinc finger CCCH-type containing 14 2 2
MIRT618838 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT624626 ATXN2 ataxin 2 2 2
MIRT624652 ASAH2 N-acylsphingosine amidohydrolase 2 2 2
MIRT640314 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT659248 CUL3 cullin 3 2 2
MIRT680972 DCAF17 DDB1 and CUL4 associated factor 17 2 2
MIRT682261 RS1 retinoschisin 1 2 2
MIRT682505 GLP2R glucagon like peptide 2 receptor 2 2
MIRT693904 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT699214 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT699373 SLC30A6 solute carrier family 30 member 6 2 2
MIRT699451 SLC16A9 solute carrier family 16 member 9 2 2
MIRT701230 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT702849 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT706163 CASK calcium/calmodulin dependent serine protein kinase 2 3
MIRT718990 UTP15 UTP15, small subunit processome component 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4524a-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-4524a-5p Cetuximab resistant tissue (colorectal carcinoma)

Error report submission