pre-miRNA Information
pre-miRNA hsa-mir-4433a   
Genomic Coordinates chr2: 64340759 - 64340839
Description Homo sapiens miR-4433a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4433a-3p
Sequence 51| ACAGGAGUGGGGGUGGGACAU |71
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs751480515 9 dbSNP
rs557760377 15 dbSNP
rs1479580865 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SLC2A5   
Synonyms GLUT-5, GLUT5
Description solute carrier family 2 member 5
Transcript NM_003039   
Other Transcripts NM_001135585   
Expression
Putative miRNA Targets on SLC2A5
3'UTR of SLC2A5
(miRNA target sites are highlighted)
>SLC2A5|NM_003039|3'UTR
   1 CTCTGGAGAGGAAGCCAGTGGAGCTGGTCTGCCAGGGGCTTCCCACTTTGGCTTATTTTTCTGACTTCTAGCTGTCTGTG
  81 AATATCCAGAAATAAAACAACTCTGATGTGGAATGCAGTCCTCATCTCCAGCCTCCCCACCCCAGTGGGAACTGTGCAAA
 161 GGGCTGCCTTGCTGTTCTTGAAGCTGGGCTGTCTCTCTCCATGTTGGCCTGTCACCAGACCCGAGTCAATTAAACAGCTG
 241 GTCCTCCACTTTGCTGGTTCAGCCTTCGTGTGGCTCCTGGTAACGTGGCTCCACCTTGATGGGTCAACCTTTGTGTGGCT
 321 CCTGGTAACATAACAACAACAGTTACTATAGTGGTGAGATGGAAGGAATCAAATTTTGCCAGAGAAACTAACTTGGTGGC
 401 CCCGACAGGTCTTCCGGGGCCATGGGCATTTGTTTAGAGCCAAATTCATCCTCTTACCAGATCCTTTTCCAGAAATACCT
 481 GTCTAGGAAGGTGTGATGTCAGAAACAATGACATCCAGAAAGCTGAGGAACAGGTTCCTGTGGAGACACTGAGTCAGAAT
 561 TCTTCATCCTAAATTATTTTGTTAGTGGAAAATGGAATTGCTTCTGTGTAGTCAATAAAATGAACCTGATCACTTTTCAA
 641 AAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uaCAGGGUGGGGG-----UGAGGACa 5'
            ||:| :||::|     :|||||| 
Target 5' tgGTTCAGCCTTCGTGTGGCTCCTGg 3'
255 - 280 139.00 -19.70
2
miRNA  3' uaCAGGGUGGGGG-----UGAGGACa 5'
            | :| |||:::     :|||||| 
Target 5' tgGGTCAACCTTTGTGTGGCTCCTGg 3'
300 - 325 131.00 -17.50
3
miRNA  3' uaCAGGGU---GGGGGUGAGGAca 5'
            | |::|   ::|: |||:||  
Target 5' ttGGCTTATTTTTCTGACTTCTag 3'
48 - 71 111.00 -9.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN20074049 9 COSMIC
COSN26995190 10 COSMIC
COSN30109482 20 COSMIC
COSN30448479 21 COSMIC
COSN31589249 29 COSMIC
COSN30523070 38 COSMIC
COSN30184667 44 COSMIC
COSN30490216 53 COSMIC
COSN26995191 68 COSMIC
COSN30522669 123 COSMIC
COSN30186943 142 COSMIC
COSN26435362 179 COSMIC
COSN30061367 420 COSMIC
COSN19468651 613 COSMIC
COSN6472703 889 COSMIC
COSN6472699 1240 COSMIC
COSN25358655 1241 COSMIC
COSN29892661 1265 COSMIC
COSN8520898 1530 COSMIC
COSN24940180 1714 COSMIC
COSN6472692 2443 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs368473750 1 dbSNP
rs760735019 4 dbSNP
rs373782918 7 dbSNP
rs771550118 11 dbSNP
rs928436225 13 dbSNP
rs747675914 14 dbSNP
rs1368083021 16 dbSNP
rs1295024558 17 dbSNP
rs112842146 19 dbSNP
rs1407785177 20 dbSNP
rs968785310 21 dbSNP
rs540249937 23 dbSNP
rs145865106 26 dbSNP
rs1159434448 27 dbSNP
rs1285611963 29 dbSNP
rs768337165 32 dbSNP
rs1409050545 38 dbSNP
rs749630201 42 dbSNP
rs376622959 43 dbSNP
rs766902531 45 dbSNP
rs1250757494 46 dbSNP
rs1189889472 51 dbSNP
rs1305850445 52 dbSNP
rs1467397847 67 dbSNP
rs907503389 74 dbSNP
rs1375787971 79 dbSNP
rs1175255815 81 dbSNP
rs1224389323 83 dbSNP
rs767824628 86 dbSNP
rs951973353 94 dbSNP
rs1419652611 100 dbSNP
rs1029312350 102 dbSNP
rs1323036076 109 dbSNP
rs1382205232 110 dbSNP
rs874378 114 dbSNP
rs762233514 115 dbSNP
rs1018989721 123 dbSNP
rs999533216 126 dbSNP
rs1243978898 133 dbSNP
rs905798576 134 dbSNP
rs1468809086 135 dbSNP
rs902538553 138 dbSNP
rs1160919233 152 dbSNP
rs533848040 160 dbSNP
rs566506240 187 dbSNP
rs1175415002 191 dbSNP
rs1005877511 193 dbSNP
rs1245067535 195 dbSNP
rs1226016888 200 dbSNP
rs185108930 202 dbSNP
rs895426263 205 dbSNP
rs1261579176 206 dbSNP
rs1230454352 220 dbSNP
rs886115027 223 dbSNP
rs1306658988 227 dbSNP
rs1055776136 229 dbSNP
rs939573269 235 dbSNP
rs533727137 238 dbSNP
rs906659113 240 dbSNP
rs1319288518 249 dbSNP
rs1045515581 267 dbSNP
rs569403572 268 dbSNP
rs907558105 284 dbSNP
rs370944876 285 dbSNP
rs1363041040 288 dbSNP
rs984485400 292 dbSNP
rs1041635913 298 dbSNP
rs1425313946 302 dbSNP
rs563781275 307 dbSNP
rs1397477053 308 dbSNP
rs551164847 321 dbSNP
rs1399769575 323 dbSNP
rs978775991 324 dbSNP
rs529431920 325 dbSNP
rs370653540 336 dbSNP
rs1156855875 337 dbSNP
rs1362031605 339 dbSNP
rs1245809820 342 dbSNP
rs1316422950 342 dbSNP
rs988870440 343 dbSNP
rs1439155686 346 dbSNP
rs540356096 349 dbSNP
rs528551007 354 dbSNP
rs965915344 366 dbSNP
rs568575976 367 dbSNP
rs564182259 369 dbSNP
rs11542287 372 dbSNP
rs1286726141 381 dbSNP
rs978168351 382 dbSNP
rs1459311532 388 dbSNP
rs1063137 394 dbSNP
rs533460242 395 dbSNP
rs556147648 400 dbSNP
rs1442632019 402 dbSNP
rs1016561533 403 dbSNP
rs5840 404 dbSNP
rs1487105314 406 dbSNP
rs768564931 411 dbSNP
rs1331720478 413 dbSNP
rs1010939902 415 dbSNP
rs140730594 416 dbSNP
rs959631583 422 dbSNP
rs1292875165 425 dbSNP
rs1222438843 431 dbSNP
rs1357859708 434 dbSNP
rs1033937192 437 dbSNP
rs1004168236 440 dbSNP
rs997211816 443 dbSNP
rs1325344903 445 dbSNP
rs906711481 450 dbSNP
rs112981197 451 dbSNP
rs1246495812 458 dbSNP
rs1302262837 459 dbSNP
rs746919797 465 dbSNP
rs1422487133 467 dbSNP
rs1338359639 470 dbSNP
rs1372373467 473 dbSNP
rs1311672825 478 dbSNP
rs780018608 481 dbSNP
rs558148532 490 dbSNP
rs1372516286 512 dbSNP
rs555583622 518 dbSNP
rs1191309364 523 dbSNP
rs1041212619 530 dbSNP
rs1049284863 540 dbSNP
rs930329815 544 dbSNP
rs371235309 547 dbSNP
rs1199209241 548 dbSNP
rs889967972 554 dbSNP
rs541050269 561 dbSNP
rs1419071073 569 dbSNP
rs369998619 581 dbSNP
rs921562803 583 dbSNP
rs1038965244 584 dbSNP
rs757281726 594 dbSNP
rs573109870 615 dbSNP
rs1366233727 617 dbSNP
rs944599851 624 dbSNP
rs1043290042 626 dbSNP
rs1225002303 628 dbSNP
rs947636494 632 dbSNP
rs911794325 635 dbSNP
rs977921361 646 dbSNP
rs1337291213 647 dbSNP
rs1402940354 647 dbSNP
rs1194264747 649 dbSNP
rs866800392 662 dbSNP
rs376768151 668 dbSNP
rs966506354 669 dbSNP
rs915364396 676 dbSNP
rs989930312 685 dbSNP
rs959407695 688 dbSNP
rs1395902103 693 dbSNP
rs1193548996 696 dbSNP
rs533913817 702 dbSNP
rs1490667946 707 dbSNP
rs1175973835 710 dbSNP
rs1479694883 711 dbSNP
rs397938321 716 dbSNP
rs60743290 716 dbSNP
rs9434672 716 dbSNP
rs913206418 717 dbSNP
rs1003817139 719 dbSNP
rs1461372727 722 dbSNP
rs375205579 722 dbSNP
rs1211123916 728 dbSNP
rs1353738073 729 dbSNP
rs1221240902 746 dbSNP
rs1238268575 746 dbSNP
rs1333956959 746 dbSNP
rs560163300 746 dbSNP
rs1264486159 750 dbSNP
rs566568449 751 dbSNP
rs1319706762 758 dbSNP
rs1406906230 759 dbSNP
rs180672427 759 dbSNP
rs1399275830 762 dbSNP
rs1370341361 767 dbSNP
rs970991494 782 dbSNP
rs1412919134 788 dbSNP
rs1015846452 790 dbSNP
rs1004423944 791 dbSNP
rs1469930236 800 dbSNP
rs888576798 807 dbSNP
rs1048812981 811 dbSNP
rs1390196973 820 dbSNP
rs539022672 821 dbSNP
rs1241909523 823 dbSNP
rs938746267 825 dbSNP
rs1448320370 826 dbSNP
rs189149512 840 dbSNP
rs980219963 843 dbSNP
rs1039136378 855 dbSNP
rs944366573 869 dbSNP
rs550965088 872 dbSNP
rs911841680 873 dbSNP
rs1383622940 874 dbSNP
rs1314425094 876 dbSNP
rs1446124504 879 dbSNP
rs370977373 884 dbSNP
rs1400547893 885 dbSNP
rs945212569 886 dbSNP
rs1166020005 888 dbSNP
rs6677822 889 dbSNP
rs112239411 890 dbSNP
rs746976772 897 dbSNP
rs149828047 901 dbSNP
rs984646490 916 dbSNP
rs1197452642 917 dbSNP
rs546784031 920 dbSNP
rs1242408631 932 dbSNP
rs938069454 938 dbSNP
rs1445082398 940 dbSNP
rs1293590339 949 dbSNP
rs6692768 950 dbSNP
rs997175883 951 dbSNP
rs1289481332 957 dbSNP
rs1226725025 963 dbSNP
rs1458835715 966 dbSNP
rs564197910 970 dbSNP
rs200382371 971 dbSNP
rs1017736044 977 dbSNP
rs1276545064 981 dbSNP
rs1305288413 992 dbSNP
rs151056745 1005 dbSNP
rs113665082 1006 dbSNP
rs1329668490 1010 dbSNP
rs563675425 1019 dbSNP
rs1027544797 1020 dbSNP
rs868183477 1023 dbSNP
rs139831297 1024 dbSNP
rs147881888 1036 dbSNP
rs928657286 1049 dbSNP
rs1008554778 1050 dbSNP
rs980571560 1051 dbSNP
rs948846179 1054 dbSNP
rs145271688 1065 dbSNP
rs1214226729 1075 dbSNP
rs1178734700 1079 dbSNP
rs1285395807 1080 dbSNP
rs553615216 1082 dbSNP
rs1042292182 1090 dbSNP
rs1345259092 1094 dbSNP
rs1292304782 1096 dbSNP
rs1444913656 1099 dbSNP
rs945264989 1110 dbSNP
rs540381828 1114 dbSNP
rs1442778414 1115 dbSNP
rs572984157 1119 dbSNP
rs1176706388 1145 dbSNP
rs139777368 1149 dbSNP
rs749344008 1150 dbSNP
rs966057692 1155 dbSNP
rs867319189 1156 dbSNP
rs926739897 1165 dbSNP
rs1232210951 1167 dbSNP
rs1007693203 1169 dbSNP
rs1456497126 1170 dbSNP
rs982153314 1173 dbSNP
rs1224297039 1180 dbSNP
rs1323279767 1187 dbSNP
rs949372079 1190 dbSNP
rs1299596065 1194 dbSNP
rs1374852444 1198 dbSNP
rs1374764160 1199 dbSNP
rs1021783222 1202 dbSNP
rs908513662 1209 dbSNP
rs1444030408 1212 dbSNP
rs1308783762 1215 dbSNP
rs1407576504 1222 dbSNP
rs1011785882 1226 dbSNP
rs1468926873 1227 dbSNP
rs891976021 1228 dbSNP
rs1161080800 1235 dbSNP
rs539440743 1238 dbSNP
rs879359048 1239 dbSNP
rs6692445 1240 dbSNP
rs185044086 1241 dbSNP
rs907167504 1241 dbSNP
rs948794650 1241 dbSNP
rs976018638 1243 dbSNP
rs1158657707 1244 dbSNP
rs1483021498 1250 dbSNP
rs759983812 1265 dbSNP
rs1378013122 1266 dbSNP
rs1048875917 1267 dbSNP
rs1017776826 1271 dbSNP
rs1241998497 1277 dbSNP
rs538396176 1282 dbSNP
rs144645957 1284 dbSNP
rs1315075137 1285 dbSNP
rs577299524 1289 dbSNP
rs1441705978 1303 dbSNP
rs1376566651 1308 dbSNP
rs1290262374 1309 dbSNP
rs1009171019 1310 dbSNP
rs762486507 1318 dbSNP
rs1156780951 1330 dbSNP
rs1053701785 1331 dbSNP
rs1286646424 1334 dbSNP
rs1184345108 1341 dbSNP
rs1423288948 1344 dbSNP
rs1254418490 1348 dbSNP
rs773202073 1354 dbSNP
rs968194635 1355 dbSNP
rs1218775616 1359 dbSNP
rs1351569020 1361 dbSNP
rs1285701793 1362 dbSNP
rs58711619 1368 dbSNP
rs1215110992 1374 dbSNP
rs772863415 1375 dbSNP
rs1293097125 1376 dbSNP
rs937845056 1377 dbSNP
rs568413825 1389 dbSNP
rs1297292864 1390 dbSNP
rs1382373124 1400 dbSNP
rs1361054010 1406 dbSNP
rs150776866 1408 dbSNP
rs1406522890 1411 dbSNP
rs1366160641 1414 dbSNP
rs59488039 1417 dbSNP
rs949423356 1422 dbSNP
rs1341600597 1424 dbSNP
rs908607921 1435 dbSNP
rs1300574316 1438 dbSNP
rs1003521983 1442 dbSNP
rs1047120877 1451 dbSNP
rs1044786192 1457 dbSNP
rs1490941109 1458 dbSNP
rs931320441 1465 dbSNP
rs1270307234 1467 dbSNP
rs761369914 1478 dbSNP
rs776389195 1480 dbSNP
rs975654737 1489 dbSNP
rs964570067 1490 dbSNP
rs1358040829 1493 dbSNP
rs552585365 1494 dbSNP
rs1012956678 1522 dbSNP
rs887788623 1531 dbSNP
rs912703449 1551 dbSNP
rs1405542056 1552 dbSNP
rs768316313 1571 dbSNP
rs1415526944 1577 dbSNP
rs1316975422 1580 dbSNP
rs929412789 1581 dbSNP
rs1225189185 1591 dbSNP
rs10864383 1595 dbSNP
rs570631023 1597 dbSNP
rs1263694086 1598 dbSNP
rs181222801 1599 dbSNP
rs1384943590 1603 dbSNP
rs944603162 1604 dbSNP
rs910509285 1609 dbSNP
rs1462532005 1612 dbSNP
rs1423263667 1616 dbSNP
rs1009221941 1633 dbSNP
rs1481630665 1634 dbSNP
rs946325459 1645 dbSNP
rs1198816853 1651 dbSNP
rs1450343259 1671 dbSNP
rs567950280 1672 dbSNP
rs1253261376 1673 dbSNP
rs1195915694 1674 dbSNP
rs1456928654 1675 dbSNP
rs1255826748 1676 dbSNP
rs12125486 1683 dbSNP
rs1273973594 1689 dbSNP
rs1230759620 1692 dbSNP
rs707453 1696 dbSNP
rs1287991740 1714 dbSNP
rs1307611310 1718 dbSNP
rs1447684708 1719 dbSNP
rs1228023308 1720 dbSNP
rs570310463 1726 dbSNP
rs749304036 1734 dbSNP
rs1046285118 1739 dbSNP
rs1013410060 1743 dbSNP
rs887222153 1744 dbSNP
rs981671127 1747 dbSNP
rs1183151458 1753 dbSNP
rs1438559382 1758 dbSNP
rs189176960 1774 dbSNP
rs537259065 1778 dbSNP
rs1461526045 1779 dbSNP
rs1436566529 1781 dbSNP
rs919906391 1787 dbSNP
rs1040375009 1790 dbSNP
rs1321149894 1794 dbSNP
rs777699400 1797 dbSNP
rs11121305 1798 dbSNP
rs1239251235 1812 dbSNP
rs986959947 1819 dbSNP
rs1476765522 1832 dbSNP
rs796765315 1838 dbSNP
rs1191768408 1848 dbSNP
rs967512660 1853 dbSNP
rs1489499682 1863 dbSNP
rs1333736629 1866 dbSNP
rs377672348 1877 dbSNP
rs1387508833 1883 dbSNP
rs1245111246 1884 dbSNP
rs987874802 1887 dbSNP
rs1159796526 1888 dbSNP
rs1221075490 1890 dbSNP
rs1419574221 1903 dbSNP
rs1458409016 1905 dbSNP
rs184403950 1914 dbSNP
rs993530945 1919 dbSNP
rs1217200704 1942 dbSNP
rs1236608576 1942 dbSNP
rs897938317 1945 dbSNP
rs1448535265 1946 dbSNP
rs1040607842 1947 dbSNP
rs1221478521 1948 dbSNP
rs752828965 1950 dbSNP
rs1002258205 1955 dbSNP
rs370073438 1958 dbSNP
rs1439640850 1967 dbSNP
rs1293827099 1984 dbSNP
rs561922764 1986 dbSNP
rs533497996 1991 dbSNP
rs755345324 2006 dbSNP
rs1283820344 2010 dbSNP
rs752004273 2023 dbSNP
rs1446013184 2025 dbSNP
rs1328580206 2026 dbSNP
rs10864382 2035 dbSNP
rs763542642 2046 dbSNP
rs1050338788 2047 dbSNP
rs1353770948 2049 dbSNP
rs1176680379 2051 dbSNP
rs886899016 2059 dbSNP
rs1047187881 2068 dbSNP
rs1161119765 2069 dbSNP
rs946628054 2080 dbSNP
rs1423103786 2082 dbSNP
rs1190708729 2089 dbSNP
rs1440492884 2096 dbSNP
rs1192731074 2102 dbSNP
rs1487177741 2103 dbSNP
rs914896174 2117 dbSNP
rs995577607 2132 dbSNP
rs573047469 2133 dbSNP
rs1424137145 2134 dbSNP
rs1039731765 2137 dbSNP
rs1452265759 2145 dbSNP
rs10864381 2151 dbSNP
rs1226849564 2156 dbSNP
rs1341798387 2157 dbSNP
rs927766723 2165 dbSNP
rs1218485074 2169 dbSNP
rs1338821547 2180 dbSNP
rs891412654 2194 dbSNP
rs11121304 2201 dbSNP
rs1256994461 2209 dbSNP
rs1212808769 2215 dbSNP
rs1348827257 2217 dbSNP
rs1321058307 2220 dbSNP
rs946226450 2226 dbSNP
rs1411131667 2237 dbSNP
rs913372791 2239 dbSNP
rs1476720172 2256 dbSNP
rs1431080122 2257 dbSNP
rs971552558 2260 dbSNP
rs1298480850 2270 dbSNP
rs776102159 2271 dbSNP
rs1244875529 2272 dbSNP
rs1219547114 2274 dbSNP
rs149296565 2282 dbSNP
rs1258957901 2285 dbSNP
rs1198187632 2286 dbSNP
rs532271468 2293 dbSNP
rs1285540166 2307 dbSNP
rs1377080155 2308 dbSNP
rs991674182 2326 dbSNP
rs1367577214 2327 dbSNP
rs925009560 2332 dbSNP
rs1443825574 2334 dbSNP
rs1444189651 2339 dbSNP
rs1372310013 2341 dbSNP
rs1400304369 2346 dbSNP
rs1303248028 2348 dbSNP
rs139584602 2356 dbSNP
rs1027595599 2357 dbSNP
rs969038035 2358 dbSNP
rs897896734 2370 dbSNP
rs1173015791 2390 dbSNP
rs1423063670 2392 dbSNP
rs12068539 2416 dbSNP
rs574803552 2432 dbSNP
rs1382297789 2433 dbSNP
rs1009413835 2437 dbSNP
rs553219436 2441 dbSNP
rs769898 2443 dbSNP
rs1277122087 2456 dbSNP
rs1225915964 2462 dbSNP
rs951209563 2465 dbSNP
rs1377019632 2476 dbSNP
rs1307843547 2477 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 6518.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uacAGGGUGGGG-GUGAGGACa 5'
             |||::||:|   |||||| 
Target 5' uucUCCUGCCUCAGCCUCCUG- 3'
9 - 29
2
miRNA  3' uacagggugggGGUGAGGaca 5'
                     :||| ||   
Target 5' -----------UCACACCauu 3'
1 - 10
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000377424.4 | 3UTR | UCACACCAUUCUCCUGCCUCAGCCUCCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
256 hsa-miR-4433a-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT088097 SEPT2 septin 2 2 2
MIRT143134 MGRN1 mahogunin ring finger 1 2 2
MIRT153912 NCOA3 nuclear receptor coactivator 3 2 2
MIRT154894 GNAS GNAS complex locus 2 4
MIRT200996 ZNF805 zinc finger protein 805 2 2
MIRT215729 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT235593 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT263250 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT317951 CDC5L cell division cycle 5 like 2 4
MIRT325572 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT354739 LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 2 2
MIRT444552 UBE2D3 ubiquitin conjugating enzyme E2 D3 2 4
MIRT446978 SUSD5 sushi domain containing 5 2 2
MIRT451036 ZNF610 zinc finger protein 610 2 2
MIRT451596 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT452025 NLRP6 NLR family pyrin domain containing 6 2 2
MIRT452594 CA6 carbonic anhydrase 6 2 2
MIRT452768 TCEA3 transcription elongation factor A3 2 4
MIRT452959 ZNF844 zinc finger protein 844 2 2
MIRT453191 ACSF2 acyl-CoA synthetase family member 2 2 2
MIRT453382 RHD Rh blood group D antigen 2 2
MIRT453685 CEBPD CCAAT/enhancer binding protein delta 2 2
MIRT455272 DDX39B DExD-box helicase 39B 2 8
MIRT455346 BAMBI BMP and activin membrane bound inhibitor 2 2
MIRT456494 SERAC1 serine active site containing 1 2 2
MIRT456585 NID1 nidogen 1 2 2
MIRT456888 DDA1 DET1 and DDB1 associated 1 2 2
MIRT457123 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT457852 ZNF324B zinc finger protein 324B 2 2
MIRT457987 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT459278 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 2
MIRT459625 SLC25A33 solute carrier family 25 member 33 2 2
MIRT459715 SGK494 uncharacterized serine/threonine-protein kinase SgK494 2 2
MIRT460057 RPL22L1 ribosomal protein L22 like 1 2 2
MIRT460182 UNK unkempt family zinc finger 2 6
MIRT460288 PDE11A phosphodiesterase 11A 2 2
MIRT460841 EGF epidermal growth factor 2 4
MIRT460860 TBC1D19 TBC1 domain family member 19 2 2
MIRT461519 EMC7 ER membrane protein complex subunit 7 2 2
MIRT461729 SLC27A1 solute carrier family 27 member 1 2 4
MIRT461821 SNAP23 synaptosome associated protein 23 2 2
MIRT462066 CCDC77 coiled-coil domain containing 77 2 4
MIRT462084 MSANTD2 Myb/SANT DNA binding domain containing 2 2 2
MIRT462508 MTFMT mitochondrial methionyl-tRNA formyltransferase 2 10
MIRT464239 VCP valosin containing protein 2 2
MIRT465316 TRAF5 TNF receptor associated factor 5 2 2
MIRT466549 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467128 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 8
MIRT468091 SHCBP1 SHC binding and spindle associated 1 2 2
MIRT469630 RAD21 RAD21 cohesin complex component 2 6
MIRT471097 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472704 MYBL1 MYB proto-oncogene like 1 2 2
MIRT472830 MTMR10 myotubularin related protein 10 2 2
MIRT472872 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT472895 MTDH metadherin 2 2
MIRT473728 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT473859 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT474047 LONRF1 LON peptidase N-terminal domain and ring finger 1 2 2
MIRT474297 LAMC1 laminin subunit gamma 1 2 2
MIRT474658 KLF13 Kruppel like factor 13 2 2
MIRT475234 IKZF3 IKAROS family zinc finger 3 2 2
MIRT475500 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT475742 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT475793 HDGF heparin binding growth factor 2 2
MIRT477254 ERGIC2 ERGIC and golgi 2 2 2
MIRT478228 DDX52 DExD-box helicase 52 2 2
MIRT478393 DCTN5 dynactin subunit 5 2 2
MIRT478754 CS citrate synthase 2 2
MIRT478827 CRKL CRK like proto-oncogene, adaptor protein 2 4
MIRT480234 C9orf41 carnosine N-methyltransferase 1 2 2
MIRT480597 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 2 2
MIRT484121 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT484689 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 2 2
MIRT486331 C11orf54 chromosome 11 open reading frame 54 2 4
MIRT488599 FAM3C family with sequence similarity 3 member C 2 8
MIRT488833 MRRF mitochondrial ribosome recycling factor 2 2
MIRT492523 RAB15 RAB15, member RAS oncogene family 2 4
MIRT493632 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT500026 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501075 SMAD7 SMAD family member 7 2 8
MIRT503094 BTG2 BTG anti-proliferation factor 2 2 4
MIRT503336 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT505465 STMN1 stathmin 1 2 4
MIRT505726 SERTAD3 SERTA domain containing 3 2 4
MIRT509333 MS4A4A membrane spanning 4-domains A4A 2 2
MIRT509978 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 4
MIRT513068 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT513446 EMP1 epithelial membrane protein 1 2 6
MIRT513736 PSD3 pleckstrin and Sec7 domain containing 3 2 4
MIRT513996 CENPQ centromere protein Q 2 4
MIRT516538 MIXL1 Mix paired-like homeobox 2 2
MIRT517606 SAV1 salvador family WW domain containing protein 1 2 2
MIRT518064 CEP89 centrosomal protein 89 2 2
MIRT518119 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT518325 WDR92 WD repeat domain 92 2 2
MIRT519048 ABCB11 ATP binding cassette subfamily B member 11 2 2
MIRT520972 SPPL2A signal peptide peptidase like 2A 2 4
MIRT521359 RPL35A ribosomal protein L35a 2 2
MIRT523359 GTF3C6 general transcription factor IIIC subunit 6 2 2
MIRT523801 FAM63A MINDY lysine 48 deubiquitinase 1 2 2
MIRT524622 C7orf73 short transmembrane mitochondrial protein 1 2 2
MIRT525550 PHB2 prohibitin 2 2 4
MIRT529709 ZBTB49 zinc finger and BTB domain containing 49 2 2
MIRT531605 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT532387 UMPS uridine monophosphate synthetase 2 2
MIRT534468 SCD stearoyl-CoA desaturase 2 4
MIRT537546 ETNK1 ethanolamine kinase 1 2 2
MIRT541619 C11orf31 selenoprotein H 2 2
MIRT548380 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT549523 HDDC2 HD domain containing 2 2 2
MIRT549774 SOD2 superoxide dismutase 2 2 2
MIRT550578 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551498 CENPN centromere protein N 2 4
MIRT552301 ITGA3 integrin subunit alpha 3 2 2
MIRT555400 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT556399 LUC7L LUC7 like 2 2
MIRT557047 HOXB3 homeobox B3 2 2
MIRT558072 ERO1L endoplasmic reticulum oxidoreductase 1 alpha 1 2
MIRT559659 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT561239 ZNF354B zinc finger protein 354B 2 2
MIRT566899 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT568786 FAM120B family with sequence similarity 120B 2 2
MIRT574014 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT574885 Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 2 2
MIRT575243 Serping1 serine (or cysteine) peptidase inhibitor, clade G, member 1 2 2
MIRT576194 Vsig2 V-set and immunoglobulin domain containing 2 2 2
MIRT576309 Acbd7 acyl-Coenzyme A binding domain containing 7 2 2
MIRT576484 Lhx4 LIM homeobox protein 4 2 3
MIRT576646 Mill2 MHC I like leukocyte 2 1 1
MIRT576708 Kras Kirsten rat sarcoma viral oncogene homolog 2 2
MIRT576855 Socs6 suppressor of cytokine signaling 6 2 2
MIRT576950 Aldoa aldolase A, fructose-bisphosphate 2 2
MIRT617133 ZNF556 zinc finger protein 556 2 4
MIRT617928 ZNF783 zinc finger family member 783 2 2
MIRT618981 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT621100 SIX3 SIX homeobox 3 2 2
MIRT624537 BROX BRO1 domain and CAAX motif containing 2 2
MIRT625663 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT627059 DCTN6 dynactin subunit 6 2 2
MIRT628319 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT630859 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT632295 TMEM65 transmembrane protein 65 2 2
MIRT634115 ZNF207 zinc finger protein 207 2 2
MIRT634736 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT635655 NDST3 N-deacetylase and N-sulfotransferase 3 2 2
MIRT635772 PDCL3 phosducin like 3 2 2
MIRT635911 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT636365 OGFRL1 opioid growth factor receptor like 1 2 4
MIRT637251 GLRX2 glutaredoxin 2 2 2
MIRT638705 FZD4 frizzled class receptor 4 2 2
MIRT639640 PREX2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 2 2
MIRT639676 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT642267 SMIM17 small integral membrane protein 17 2 2
MIRT642372 ZNF581 zinc finger protein 581 2 2
MIRT643545 SLC25A17 solute carrier family 25 member 17 2 2
MIRT647994 PDE12 phosphodiesterase 12 2 2
MIRT649094 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT650993 ZNF770 zinc finger protein 770 2 2
MIRT651956 UBE2N ubiquitin conjugating enzyme E2 N 2 2
MIRT652977 SUN2 Sad1 and UNC84 domain containing 2 2 2
MIRT654389 RBM12B RNA binding motif protein 12B 2 2
MIRT655637 OLFML2A olfactomedin like 2A 2 2
MIRT655729 NRXN3 neurexin 3 2 2
MIRT658171 FCHSD1 FCH and double SH3 domains 1 2 2
MIRT660937 ACOX1 acyl-CoA oxidase 1 2 2
MIRT662112 CERKL ceramide kinase like 2 2
MIRT662302 MPV17L MPV17 mitochondrial inner membrane protein like 2 2
MIRT662993 TMEM59 transmembrane protein 59 2 2
MIRT663071 SFR1 SWI5 dependent homologous recombination repair protein 1 2 2
MIRT663704 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663864 MUC20 mucin 20, cell surface associated 2 2
MIRT665185 HAUS5 HAUS augmin like complex subunit 5 2 4
MIRT665402 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT665688 TNPO3 transportin 3 2 2
MIRT665795 TMEM170A transmembrane protein 170A 2 2
MIRT665847 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT666999 PDPN podoplanin 2 2
MIRT667598 LIPC lipase C, hepatic type 2 2
MIRT668576 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT670960 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT671187 ZNF891 zinc finger protein 891 2 2
MIRT671739 ZNF451 zinc finger protein 451 2 2
MIRT672745 ZNF585B zinc finger protein 585B 2 4
MIRT673446 ZNF583 zinc finger protein 583 2 2
MIRT679843 GPR75 G protein-coupled receptor 75 2 2
MIRT680556 ZNF584 zinc finger protein 584 2 2
MIRT680661 C1orf210 chromosome 1 open reading frame 210 2 2
MIRT681285 RFC2 replication factor C subunit 2 2 2
MIRT683264 ZNF329 zinc finger protein 329 2 2
MIRT684519 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT685065 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685157 DTWD2 DTW domain containing 2 2 2
MIRT685168 ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2 2
MIRT685470 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT686001 NEK4 NIMA related kinase 4 2 2
MIRT687027 RNF24 ring finger protein 24 2 2
MIRT687543 MOB1B MOB kinase activator 1B 2 2
MIRT687592 MANEAL mannosidase endo-alpha like 2 2
MIRT687753 KIAA1328 KIAA1328 2 2
MIRT688050 GLUL glutamate-ammonia ligase 2 2
MIRT688374 ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 2 2
MIRT688802 CBFA2T3 CBFA2/RUNX1 translocation partner 3 2 2
MIRT688957 ATXN3 ataxin 3 2 2
MIRT689281 C5AR2 complement component 5a receptor 2 2 2
MIRT689988 NNMT nicotinamide N-methyltransferase 2 2
MIRT689997 MMP17 matrix metallopeptidase 17 2 2
MIRT690014 LUZP2 leucine zipper protein 2 2 2
MIRT690161 ELP3 elongator acetyltransferase complex subunit 3 2 2
MIRT690379 ZSWIM7 zinc finger SWIM-type containing 7 2 2
MIRT690563 MICA MHC class I polypeptide-related sequence A 2 2
MIRT691891 EVC EvC ciliary complex subunit 1 2 2
MIRT693107 SCNM1 sodium channel modifier 1 2 2
MIRT693832 ZFP64 ZFP64 zinc finger protein 2 2
MIRT694105 ZNF446 zinc finger protein 446 2 2
MIRT694179 ZNF486 zinc finger protein 486 2 2
MIRT694475 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT694998 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 2 2
MIRT695031 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT695163 TCTN2 tectonic family member 2 2 2
MIRT695525 SLC25A34 solute carrier family 25 member 34 2 2
MIRT696067 ZNF264 zinc finger protein 264 2 2
MIRT696616 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT696661 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696705 PNPO pyridoxamine 5'-phosphate oxidase 2 2
MIRT697173 INMT indolethylamine N-methyltransferase 2 2
MIRT697303 ZNF652 zinc finger protein 652 2 2
MIRT697491 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT698657 TERF2 telomeric repeat binding factor 2 2 2
MIRT699042 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699185 SLX4IP SLX4 interacting protein 2 2
MIRT699598 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 2
MIRT700150 RNF115 ring finger protein 115 2 2
MIRT700720 PNO1 partner of NOB1 homolog 2 2
MIRT700870 PER2 period circadian clock 2 2 2
MIRT700912 PDXK pyridoxal kinase 2 2
MIRT701095 PAPOLG poly(A) polymerase gamma 2 2
MIRT701194 OTUD3 OTU deubiquitinase 3 2 2
MIRT702203 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT702272 LHX4 LIM homeobox 4 2 3
MIRT703125 GPRC5A G protein-coupled receptor class C group 5 member A 2 2
MIRT703252 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT703262 GNL3L G protein nucleolar 3 like 2 2
MIRT703440 FYTTD1 forty-two-three domain containing 1 2 2
MIRT704321 DCUN1D5 defective in cullin neddylation 1 domain containing 5 2 2
MIRT704393 CTSS cathepsin S 2 2
MIRT704483 CPT1A carnitine palmitoyltransferase 1A 2 2
MIRT704880 CCSER2 coiled-coil serine rich protein 2 2 2
MIRT704926 CCDC36 coiled-coil domain containing 36 2 2
MIRT705175 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT706561 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT707048 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT711497 PGD phosphogluconate dehydrogenase 2 2
MIRT716644 EPGN epithelial mitogen 2 2
MIRT720083 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT722288 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT725468 GRAP2 GRB2-related adaptor protein 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4433a Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-4433a Paclitaxel 36314 NSC125973 approved resistant cell line (W1)
hsa-mir-4433a Vincristine 5978 approved resistant cell line (W1)
hsa-mir-4433a Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-miR-4433a-3p Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-4433a-3p Imatinib 5291 NSC743414 approved sensitive High Gastrointestinal Stromal Tumor cell line (882R-NC, 882R-OE, 882R-KD)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant High Pancreatic Cancer cell line (BxPC-3)
hsa-miR-4433a-3p Paclitaxel 36314 NSC125973 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-4433a-3p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (mitochondrial RNA)
hsa-miR-4433a-3p Paclitaxel 36314 NSC125973 approved resistant cell line (BAS)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-miR-4433a-3p Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4433a-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-4433a-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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