pre-miRNA Information
pre-miRNA hsa-mir-4307   
Genomic Coordinates chr14: 26908642 - 26908725
Description Homo sapiens miR-4307 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4307
Sequence 56| AAUGUUUUUUCCUGUUUCC |74
Evidence Experimental
Experiments SOLiD
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1056441032 1 dbSNP
rs776987575 3 dbSNP
rs948027524 8 dbSNP
rs930210474 12 dbSNP
rs191460273 13 dbSNP
rs538831777 14 dbSNP
rs1158802910 15 dbSNP
rs1047679599 17 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol FAM229B   
Synonyms C6orf225
Description family with sequence similarity 229 member B
Transcript NM_001033564   
Expression
Putative miRNA Targets on FAM229B
3'UTR of FAM229B
(miRNA target sites are highlighted)
>FAM229B|NM_001033564|3'UTR
   1 CACCATTAAGTCTTTTGTCAAGGTCTGACTAGGTCAAGGGTAATGGACCAGTATCATCTGGTGATCTGGTAAACAAATAA
  81 AAGTGGTGGCACCTTTAGATGATGACAACAGTTGAGCTCTTTACTTTTAGTAAGACCGACAGAAATGTAGTCAGTAAAGC
 161 ACATGTAGTGATAGGCTATCAGTTATGTCTGATACATAAGACAGAATAATATTTCACAATTAGAAAGTACCTTAGAGATC
 241 ATCTTGCTCACAGTAGATCATTAATATCAATAATTAAAGATGAAGCTTAATCCACCATGGTCATCAGTCAGGTGGGGCTT
 321 ATTCTAAATGCTTAATGTGTCTTAAGCTCATTTCCTTGTTCATATTTGGGTTGCTACTTGGCTAAATCCTTTCACCTTAG
 401 TACCCTAAGCCAGTTTCCTGGCTTGATACTATTTGATAATGCTCTGCTCAGGAATGATTATATTGGGTGAGAAATGGAGC
 481 CCTGGGGTTGTGTGTTTTGGAACAGTATTCAAGATCAAAGAAAGTTCTTAGTCCATGGTTAATCTGCAAGGCATTTAAGC
 561 CACTTCCATAGAGGAGCCCAGATTGTTGGTTAAATATATTGATAATGAAGTCAAAGCTGTGGTTCCAACCCCGATTTTTC
 641 CAAGAAAAATGACGTCTGGTTATCACTTTGTACACGAAGTGCTAACCAGGTATCTTGATAAATTGTTTACAGTAGGTATT
 721 GAGAAACCTCATGTGGATTTTTTAATTTGGTTAGATGTGGGATCACTTTTGAGGATGAGGCCAGCTCTCTATGTTCTCTT
 801 TTTCTTCTTGCAGTAGTCCCCAGAAACTCAGTCTGCTTTCCTTTTCTCTCGATGGCTGTCAGCACCCATCTAATGAAATT
 881 GTCTTCTCCAAAAGACTGACTTTAGGATCAGATACAATTTTCACCAGTGTTTTTTGTCTACCTTGCTGCTTCTGAAAATA
 961 TACATATAAGCCTTTTAAAATGAAAAGTTTATTAACTTATAATTAAATAGACGTAGATGCATATGTGTTGCATTAGGTGA
1041 AAAGAAAAACTGCCAGGGAGTTATAAGAGGAAAAACTCTCAGAGCTCACACTGAGCTGGGAGAAGTTTGAATGCCAACCA
1121 GTTAAAGTGGAAAGATCTTGAACATGTGGGGCATTGAGTAGAGACTCAGAAAGGTTGTACTTTCATAAGAGATCCAAACT
1201 GGAGCTAGACTAAAGGCTAATGTATACCAATTTTAAGAAAGCTTAAAAATAAGCCTTGAGAGACTCAAGATGATCTCTAA
1281 GTAACCTCATTTTATCTGCCAAATAAAAATAGAACATTCCTTAAAGGAAGAAAACAAAATCGAGGCAGGAAATTGCCTGA
1361 GGCTGGAGAAAAAATGACAGGAAGGAGAAAGGAGTGATGAAAAATTCCTCAGAGGGCTGGGCTTGGTGGCTCATGCCTGT
1441 AATCCTGGCACTTTGGGAGGCCGAAGTGGATGGATTATCTGAGGTCAGGCATTCGAAGCCAGCCTGGCCAACATGGTGAA
1521 ACCCCGACTCTACTAAAAATACAAAAATTAGTCGGGTATGATGGGCAGGTGCCTGTAATTCCAGCTACTTGGGAGGCTGA
1601 GGCAGGAAAATAGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCTGAGATTGCATCACTGTGCTCCAGCCTAGGCAACA
1681 GAGTGAGACTTTGTCTCAAAAAAAAAGAAAAACAAAGAAAAATTCCTCAGAGCTCATACAAGGCTGGGTAGAATATGTGT
1761 TTCAACAATAGTGGATCTTTTAATATAGTACATGGATCATTGAGTAGAGTCTTCAGCAAAATATTGGCAAAGTAGGGTTA
1841 GGGTTAGGTTAGGGAGATGGGAATAGACTGAAGACTACTCTGGACTTGCCCTAACAGAGTTTAAGAGCAACATTTGAAAG
1921 GATCAAACTGATTTCAAGTAACTTGAGTGCATCCAAGGGGAGAAAACCCATCAAAATAAAAATAAAAACTACAATAAAAT
2001 CCA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ccUUUGUCCUUUUUUGUAa 5'
            |::| |||:|||| || 
Target 5' tgAGGCTGGAGAAAAAATg 3'
1358 - 1376 133.00 -11.36
2
miRNA  3' ccuuUGUCCUU-UUUUGUAa 5'
              | ||||| ||||||  
Target 5' ccttAAAGGAAGAAAACAAa 3'
1319 - 1338 127.00 -7.30
3
miRNA  3' ccUUUGUCCUUUUUUGUAa 5'
            |::| ||: |:||:|| 
Target 5' caAGGCTGGGTAGAATATg 3'
1739 - 1757 125.00 -8.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM5357284 1 COSMIC
COSN27677683 4 COSMIC
COSN30491874 5 COSMIC
COSN30480842 13 COSMIC
COSN30507336 17 COSMIC
COSN23627575 20 COSMIC
COSN30125491 26 COSMIC
COSN30502205 29 COSMIC
COSN31509173 54 COSMIC
COSN31479653 64 COSMIC
COSN30140814 102 COSMIC
COSN30105973 109 COSMIC
COSN30482427 120 COSMIC
COSN20335947 165 COSMIC
COSN30201018 247 COSMIC
COSN15662534 668 COSMIC
COSN7594073 762 COSMIC
COSN28429446 937 COSMIC
COSN24962766 1014 COSMIC
COSN15660628 1141 COSMIC
COSN24602246 1477 COSMIC
COSN17650192 1820 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs781812206 2 dbSNP
rs1311236991 13 dbSNP
rs1393700099 13 dbSNP
rs1397266039 19 dbSNP
rs1330848205 24 dbSNP
rs782440866 28 dbSNP
rs183512768 38 dbSNP
rs931546665 40 dbSNP
rs782252871 41 dbSNP
rs782488915 43 dbSNP
rs782683053 45 dbSNP
rs782281193 46 dbSNP
rs782186129 53 dbSNP
rs1367725061 57 dbSNP
rs887101184 60 dbSNP
rs938624177 64 dbSNP
rs1057244176 67 dbSNP
rs1185288687 71 dbSNP
rs894522219 72 dbSNP
rs782771132 80 dbSNP
rs1250597628 84 dbSNP
rs1197471147 87 dbSNP
rs1456124824 90 dbSNP
rs3177143 92 dbSNP
rs1045282900 100 dbSNP
rs1214654066 103 dbSNP
rs587773083 110 dbSNP
rs77668306 115 dbSNP
rs781965360 117 dbSNP
rs1241802053 132 dbSNP
rs587727519 138 dbSNP
rs1000735222 144 dbSNP
rs1030836723 161 dbSNP
rs17073353 165 dbSNP
rs1373424232 169 dbSNP
rs782533131 171 dbSNP
rs1326797876 182 dbSNP
rs1405025656 183 dbSNP
rs1389740936 188 dbSNP
rs782540935 190 dbSNP
rs187945530 194 dbSNP
rs117944757 195 dbSNP
rs1177424561 197 dbSNP
rs975638488 207 dbSNP
rs1254389402 208 dbSNP
rs587598947 215 dbSNP
rs1450751041 228 dbSNP
rs191979702 232 dbSNP
rs1207276749 241 dbSNP
rs952977143 246 dbSNP
rs1351948822 248 dbSNP
rs587730925 249 dbSNP
rs983032974 260 dbSNP
rs1238667844 298 dbSNP
rs1350099897 302 dbSNP
rs141711877 306 dbSNP
rs1436007763 315 dbSNP
rs1329574711 320 dbSNP
rs782162769 322 dbSNP
rs1383737322 325 dbSNP
rs1361034663 326 dbSNP
rs1157953683 338 dbSNP
rs1417829981 341 dbSNP
rs1396359219 344 dbSNP
rs1172717259 348 dbSNP
rs587679415 351 dbSNP
rs1244629240 359 dbSNP
rs587734532 364 dbSNP
rs1262965268 369 dbSNP
rs782455417 370 dbSNP
rs112847005 373 dbSNP
rs754715779 384 dbSNP
rs1281053562 396 dbSNP
rs1218724026 397 dbSNP
rs185221569 401 dbSNP
rs1272166665 404 dbSNP
rs148470259 419 dbSNP
rs145358007 420 dbSNP
rs1297426522 421 dbSNP
rs1398056281 428 dbSNP
rs1377216644 430 dbSNP
rs1334172723 434 dbSNP
rs1422564689 438 dbSNP
rs147679083 440 dbSNP
rs782124735 442 dbSNP
rs1477979718 443 dbSNP
rs1423336923 449 dbSNP
rs1191967632 457 dbSNP
rs782593774 466 dbSNP
rs782495807 471 dbSNP
rs1486900803 477 dbSNP
rs188233236 482 dbSNP
rs1209448352 491 dbSNP
rs1440748375 494 dbSNP
rs903687590 495 dbSNP
rs1196598902 501 dbSNP
rs78129129 506 dbSNP
rs1052317577 524 dbSNP
rs892361714 536 dbSNP
rs1007874077 546 dbSNP
rs1357247274 547 dbSNP
rs1019687826 566 dbSNP
rs1447270992 569 dbSNP
rs1014479 579 dbSNP
rs996995990 586 dbSNP
rs1465762998 588 dbSNP
rs1399096882 597 dbSNP
rs184378840 607 dbSNP
rs1168928809 630 dbSNP
rs782227164 633 dbSNP
rs952863069 634 dbSNP
rs587703222 642 dbSNP
rs1472135044 653 dbSNP
rs782661534 654 dbSNP
rs982918123 655 dbSNP
rs1457432423 656 dbSNP
rs1256437529 657 dbSNP
rs2010315 658 dbSNP
rs1323266271 660 dbSNP
rs1290408351 661 dbSNP
rs142329763 665 dbSNP
rs1227656111 667 dbSNP
rs2010314 675 dbSNP
rs587597727 676 dbSNP
rs915889029 677 dbSNP
rs781927671 681 dbSNP
rs1446924409 682 dbSNP
rs587642816 695 dbSNP
rs1375632120 705 dbSNP
rs1328844104 714 dbSNP
rs1462726538 720 dbSNP
rs1350829391 726 dbSNP
rs1164588398 731 dbSNP
rs1404038126 738 dbSNP
rs1410809299 750 dbSNP
rs1179294531 752 dbSNP
rs1439191274 758 dbSNP
rs62416961 761 dbSNP
rs1236489214 777 dbSNP
rs5879136 781 dbSNP
rs1488960425 787 dbSNP
rs979263044 790 dbSNP
rs1220559432 791 dbSNP
rs1319811756 802 dbSNP
rs587722442 809 dbSNP
rs1240847403 811 dbSNP
rs1352293000 812 dbSNP
rs936527558 816 dbSNP
rs1306537867 818 dbSNP
rs73541464 827 dbSNP
rs1367885950 830 dbSNP
rs1293236642 832 dbSNP
rs892413453 842 dbSNP
rs1347416486 845 dbSNP
rs781890891 851 dbSNP
rs188293635 852 dbSNP
rs1378532365 870 dbSNP
rs374591346 870 dbSNP
rs782351252 872 dbSNP
rs1424759876 875 dbSNP
rs587730402 876 dbSNP
rs1487369420 880 dbSNP
rs1265114881 881 dbSNP
rs1217242183 891 dbSNP
rs1487955325 894 dbSNP
rs1283190910 895 dbSNP
rs1234790734 898 dbSNP
rs587611931 904 dbSNP
rs1300196414 908 dbSNP
rs1217171868 913 dbSNP
rs1342741148 915 dbSNP
rs180905776 924 dbSNP
rs1399868902 926 dbSNP
rs1359187550 929 dbSNP
rs1314781217 930 dbSNP
rs1027161116 939 dbSNP
rs1466635162 962 dbSNP
rs1377186983 963 dbSNP
rs888172612 974 dbSNP
rs1174179556 978 dbSNP
rs1430587835 982 dbSNP
rs1425490412 983 dbSNP
rs1194135797 985 dbSNP
rs1004407410 992 dbSNP
rs1260982562 1000 dbSNP
rs368709487 1005 dbSNP
rs146621216 1013 dbSNP
rs960312337 1014 dbSNP
rs1254948479 1019 dbSNP
rs993490465 1022 dbSNP
rs1023183347 1031 dbSNP
rs1319566426 1032 dbSNP
rs970477974 1035 dbSNP
rs1279161098 1037 dbSNP
rs184599888 1038 dbSNP
rs781975327 1039 dbSNP
rs1339025359 1056 dbSNP
rs926064464 1059 dbSNP
rs1315407167 1063 dbSNP
rs1397163751 1065 dbSNP
rs1301230331 1066 dbSNP
rs1467325636 1068 dbSNP
rs111596260 1078 dbSNP
rs987970785 1085 dbSNP
rs1171062704 1088 dbSNP
rs1464933928 1090 dbSNP
rs913736446 1093 dbSNP
rs943844583 1118 dbSNP
rs1189502588 1122 dbSNP
rs1424382990 1144 dbSNP
rs1254860391 1145 dbSNP
rs1041365489 1156 dbSNP
rs899718964 1157 dbSNP
rs1179625324 1161 dbSNP
rs1458783635 1163 dbSNP
rs932325112 1174 dbSNP
rs782780530 1175 dbSNP
rs888224956 1177 dbSNP
rs1316426350 1178 dbSNP
rs1267667553 1179 dbSNP
rs1246159957 1188 dbSNP
rs778554368 1198 dbSNP
rs1340403032 1200 dbSNP
rs1310590916 1204 dbSNP
rs1003957440 1210 dbSNP
rs587713323 1213 dbSNP
rs1015808906 1215 dbSNP
rs73541466 1217 dbSNP
rs1014396122 1218 dbSNP
rs1464306268 1226 dbSNP
rs1023658997 1227 dbSNP
rs1394047796 1228 dbSNP
rs1164845566 1239 dbSNP
rs1458299256 1246 dbSNP
rs1367846425 1256 dbSNP
rs1162050115 1259 dbSNP
rs6901156 1273 dbSNP
rs782647486 1282 dbSNP
rs371106576 1286 dbSNP
rs1456222092 1289 dbSNP
rs374315003 1293 dbSNP
rs1210822871 1296 dbSNP
rs1356203663 1303 dbSNP
rs782712788 1312 dbSNP
rs1242998295 1313 dbSNP
rs1354474331 1317 dbSNP
rs1308690206 1323 dbSNP
rs115929516 1326 dbSNP
rs1333048702 1327 dbSNP
rs988861272 1342 dbSNP
rs911940128 1352 dbSNP
rs1389800680 1369 dbSNP
rs1301195738 1389 dbSNP
rs1421503278 1392 dbSNP
rs1380372960 1400 dbSNP
rs587640378 1406 dbSNP
rs1157534731 1409 dbSNP
rs1468233424 1413 dbSNP
rs782005947 1414 dbSNP
rs781821402 1417 dbSNP
rs1451360284 1418 dbSNP
rs1265765046 1419 dbSNP
rs782638554 1421 dbSNP
rs1488939654 1422 dbSNP
rs1285309303 1423 dbSNP
rs782490164 1424 dbSNP
rs189333914 1426 dbSNP
rs1275633020 1434 dbSNP
rs932571929 1436 dbSNP
rs1330288429 1444 dbSNP
rs587766966 1454 dbSNP
rs782779290 1463 dbSNP
rs939634085 1464 dbSNP
rs1398481081 1469 dbSNP
rs782455590 1472 dbSNP
rs587642632 1484 dbSNP
rs1172776732 1489 dbSNP
rs1477524073 1494 dbSNP
rs181633539 1495 dbSNP
rs1196300107 1499 dbSNP
rs1478399648 1505 dbSNP
rs1263147101 1507 dbSNP
rs1214332658 1511 dbSNP
rs1014861307 1518 dbSNP
rs147893816 1526 dbSNP
rs1343145583 1527 dbSNP
rs1281077397 1530 dbSNP
rs1220263208 1531 dbSNP
rs1341007971 1548 dbSNP
rs1277451219 1554 dbSNP
rs1428608540 1559 dbSNP
rs906143317 1564 dbSNP
rs186935662 1570 dbSNP
rs1413482318 1572 dbSNP
rs1403451308 1586 dbSNP
rs1173228386 1587 dbSNP
rs6906094 1593 dbSNP
rs1423418553 1594 dbSNP
rs1474098649 1601 dbSNP
rs587608322 1605 dbSNP
rs1186951382 1626 dbSNP
rs1460111275 1628 dbSNP
rs1199549986 1638 dbSNP
rs1318306325 1662 dbSNP
rs1257250974 1663 dbSNP
rs1212728673 1672 dbSNP
rs1381255366 1673 dbSNP
rs1284211329 1686 dbSNP
rs1446675989 1691 dbSNP
rs1379996089 1695 dbSNP
rs11373481 1698 dbSNP
rs1332932058 1698 dbSNP
rs369984424 1698 dbSNP
rs1168782524 1704 dbSNP
rs200949375 1708 dbSNP
rs202240592 1709 dbSNP
rs1407521637 1710 dbSNP
rs191406717 1712 dbSNP
rs1162698731 1714 dbSNP
rs368885332 1718 dbSNP
rs1240157141 1722 dbSNP
rs1179478133 1735 dbSNP
rs1457535769 1735 dbSNP
rs587709856 1736 dbSNP
rs1019003128 1744 dbSNP
rs1202195067 1746 dbSNP
rs966134237 1753 dbSNP
rs1323377739 1759 dbSNP
rs977018198 1772 dbSNP
rs1290471480 1793 dbSNP
rs868970063 1799 dbSNP
rs1356628391 1805 dbSNP
rs781920733 1815 dbSNP
rs2213842 1821 dbSNP
rs1296762426 1825 dbSNP
rs1350872614 1833 dbSNP
rs1439090061 1833 dbSNP
rs954138158 1838 dbSNP
rs1423358859 1840 dbSNP
rs1382241261 1846 dbSNP
rs79763880 1854 dbSNP
rs1439252880 1858 dbSNP
rs909772237 1860 dbSNP
rs939686862 1861 dbSNP
rs1036681067 1875 dbSNP
rs1406085660 1877 dbSNP
rs1175221801 1879 dbSNP
rs1489329497 1880 dbSNP
rs1247131021 1887 dbSNP
rs1221652503 1889 dbSNP
rs1489841412 1891 dbSNP
rs1287469043 1893 dbSNP
rs1216735296 1894 dbSNP
rs1315919345 1901 dbSNP
rs776964335 1909 dbSNP
rs1304374653 1917 dbSNP
rs1220644813 1924 dbSNP
rs1368731904 1925 dbSNP
rs587751980 1928 dbSNP
rs1274698062 1941 dbSNP
rs1403566440 1943 dbSNP
rs1363016716 1944 dbSNP
rs1298830732 1945 dbSNP
rs1419204516 1949 dbSNP
rs2213843 1955 dbSNP
rs1434052631 1968 dbSNP
rs1425527700 1971 dbSNP
rs1198439443 1973 dbSNP
rs1479388962 1979 dbSNP
rs587657493 1984 dbSNP
rs949822974 1989 dbSNP
rs1258494966 1992 dbSNP
rs1211791347 1997 dbSNP
rs1312413402 1998 dbSNP
rs1262843941 2004 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 619208.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ccUUUGUCCUUUUUUGUAa 5'
            ||: |  | ||||||| 
Target 5' caAAGGAUUAUAAAACAUg 3'
10 - 28
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000368656.2 | 3UTR | AUAUAUACCCAAAGGAUUAUAAAACAUGCUGCUAUAAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
107 hsa-miR-4307 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT091681 RARB retinoic acid receptor beta 2 6
MIRT097311 AGGF1 angiogenic factor with G-patch and FHA domains 1 2 2
MIRT099878 SOX4 SRY-box 4 2 2
MIRT114514 ARF6 ADP ribosylation factor 6 2 2
MIRT163479 WNT5A Wnt family member 5A 2 2
MIRT186633 COX20 COX20, cytochrome c oxidase assembly factor 2 8
MIRT194921 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT230189 AKAP17A A-kinase anchoring protein 17A 2 2
MIRT281397 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT328018 RLIM ring finger protein, LIM domain interacting 2 2
MIRT354896 SEC62 SEC62 homolog, preprotein translocation factor 2 2
MIRT361422 PNRC1 proline rich nuclear receptor coactivator 1 2 2
MIRT442526 MOB3B MOB kinase activator 3B 2 2
MIRT442629 NUDT12 nudix hydrolase 12 2 2
MIRT442685 SLC39A9 solute carrier family 39 member 9 2 2
MIRT444131 BRCA2 BRCA2, DNA repair associated 2 2
MIRT444174 RBM7 RNA binding motif protein 7 2 2
MIRT446045 TPR translocated promoter region, nuclear basket protein 2 2
MIRT447984 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT460527 S100A11 S100 calcium binding protein A11 2 4
MIRT466861 STX6 syntaxin 6 2 2
MIRT468806 SAP18 Sin3A associated protein 18 2 6
MIRT480269 C8orf4 chromosome 8 open reading frame 4 2 2
MIRT493119 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 6
MIRT499168 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 8
MIRT500507 ZBTB34 zinc finger and BTB domain containing 34 2 2
MIRT503021 CAND1 cullin associated and neddylation dissociated 1 2 2
MIRT505314 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT506123 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 8
MIRT509346 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 4
MIRT509446 POU2F2 POU class 2 homeobox 2 2 6
MIRT509598 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT516008 GPN2 GPN-loop GTPase 2 2 2
MIRT516120 SRPX2 sushi repeat containing protein, X-linked 2 2 4
MIRT522126 NELL2 neural EGFL like 2 2 2
MIRT523018 IL1RAPL1 interleukin 1 receptor accessory protein like 1 2 4
MIRT524015 DONSON downstream neighbor of SON 2 2
MIRT526307 JAKMIP2 janus kinase and microtubule interacting protein 2 2 2
MIRT526789 SGCD sarcoglycan delta 2 2
MIRT529141 CLCC1 chloride channel CLIC like 1 2 2
MIRT531336 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT531573 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT531831 MTPAP mitochondrial poly(A) polymerase 2 2
MIRT534994 PRR11 proline rich 11 2 6
MIRT535419 PDZD8 PDZ domain containing 8 2 2
MIRT535534 PAK2 p21 (RAC1) activated kinase 2 2 2
MIRT536649 INIP INTS3 and NABP interacting protein 2 2
MIRT543498 MDM2 MDM2 proto-oncogene 2 4
MIRT545392 PM20D2 peptidase M20 domain containing 2 2 2
MIRT545881 ZNF200 zinc finger protein 200 2 4
MIRT547931 HNRNPR heterogeneous nuclear ribonucleoprotein R 2 2
MIRT548109 GDAP2 ganglioside induced differentiation associated protein 2 2 2
MIRT549370 ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A 2 2
MIRT549934 RPL7L1 ribosomal protein L7 like 1 2 4
MIRT550455 MYADM myeloid associated differentiation marker 2 4
MIRT550640 AR androgen receptor 2 2
MIRT550815 FAM229B family with sequence similarity 229 member B 2 2
MIRT551258 OPCML opioid binding protein/cell adhesion molecule like 2 2
MIRT551768 MED21 mediator complex subunit 21 2 2
MIRT552214 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT555472 POGZ pogo transposable element derived with ZNF domain 2 2
MIRT556008 MZT1 mitotic spindle organizing protein 1 2 2
MIRT557878 FEM1B fem-1 homolog B 2 4
MIRT558486 DBN1 drebrin 1 2 2
MIRT560859 GAL3ST3 galactose-3-O-sulfotransferase 3 2 2
MIRT561521 AZF1 azoospermia factor 1 2 2
MIRT562090 KIAA0895 KIAA0895 2 2
MIRT563065 ZNF28 zinc finger protein 28 2 2
MIRT563487 ZWINT ZW10 interacting kinetochore protein 2 2
MIRT564286 CTCF CCCTC-binding factor 2 2
MIRT565627 SLC16A1 solute carrier family 16 member 1 2 2
MIRT566508 PAWR pro-apoptotic WT1 regulator 2 2
MIRT566978 LBR lamin B receptor 2 2
MIRT567180 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT568432 GDNF glial cell derived neurotrophic factor 2 2
MIRT570092 KANSL1L KAT8 regulatory NSL complex subunit 1 like 2 2
MIRT570565 PABPC1 poly(A) binding protein cytoplasmic 1 2 2
MIRT571385 JKAMP JNK1/MAPK8-associated membrane protein 2 2
MIRT572053 GPATCH8 G-patch domain containing 8 2 2
MIRT572333 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT574528 PEG10 paternally expressed 10 2 2
MIRT575818 Igfbp4 insulin-like growth factor binding protein 4 2 2
MIRT608587 PPP2R1B protein phosphatase 2 scaffold subunit Abeta 2 4
MIRT610442 TSPAN15 tetraspanin 15 2 2
MIRT614994 GABRB1 gamma-aminobutyric acid type A receptor beta1 subunit 2 2
MIRT615014 ERGIC2 ERGIC and golgi 2 2 2
MIRT615078 CISD3 CDGSH iron sulfur domain 3 2 2
MIRT616180 SYT7 synaptotagmin 7 2 2
MIRT617191 CDH13 cadherin 13 2 2
MIRT617287 GTF2H3 general transcription factor IIH subunit 3 2 2
MIRT618714 ESD esterase D 2 2
MIRT621825 TIMM8B translocase of inner mitochondrial membrane 8 homolog B 2 2
MIRT624139 DLX3 distal-less homeobox 3 2 2
MIRT625991 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT626344 BLOC1S4 biogenesis of lysosomal organelles complex 1 subunit 4 2 2
MIRT634899 ZNF701 zinc finger protein 701 2 2
MIRT637848 SLC2A9 solute carrier family 2 member 9 2 2
MIRT639514 FYB FYN binding protein 1 2 2
MIRT642468 RSL1D1 ribosomal L1 domain containing 1 2 2
MIRT653670 SLC26A7 solute carrier family 26 member 7 2 2
MIRT655192 PHAX phosphorylated adaptor for RNA export 2 2
MIRT657011 KCNMB4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 2 2
MIRT661008 ABCB11 ATP binding cassette subfamily B member 11 2 2
MIRT665816 TMEM161B transmembrane protein 161B 2 2
MIRT683852 ZNF208 zinc finger protein 208 2 2
MIRT700436 PURB purine rich element binding protein B 2 2
MIRT700517 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4307 Tripterygium wilfordii Hook F resistant tissue
hsa-miR-4307 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4307 Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4307 Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine sensitive cell line (Bats-72)

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