pre-miRNA Information
pre-miRNA hsa-mir-3192   
Genomic Coordinates chr20: 18470615 - 18470691
Description Homo sapiens miR-3192 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3192-5p
Sequence 10| UCUGGGAGGUUGUAGCAGUGGAA |32
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906254403 3 dbSNP
rs554130490 4 dbSNP
rs773140898 6 dbSNP
rs376614009 11 dbSNP
rs899297329 12 dbSNP
rs1330418015 18 dbSNP
rs1402597660 21 dbSNP
rs995052311 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol LETM1   
Synonyms -
Description leucine zipper and EF-hand containing transmembrane protein 1
Transcript NM_012318   
Expression
Putative miRNA Targets on LETM1
3'UTR of LETM1
(miRNA target sites are highlighted)
>LETM1|NM_012318|3'UTR
   1 AACCACTGGCCTGGGCACCTGTCCTCCTGCTGTGCCGTCACCCTGGCAAGGGCCGTGAGGGCGATTGCTTTGTGGTGATT
  81 CTCAGTGGCTCATCTAATATTTTGGCTGGAATAAATCAGAGACTTCCATAATCAAGTAAATTTTAATTTTCATCATTCCA
 161 CGGAGATTCAGTCTGTCTGGAATCCCGGAACCCCTCCACAGAATCGTGTCTGGATCCACACTGTGGTGTGGCTGCCACGG
 241 CCTCCTGGCTCCAGAGGCAGCTGGGCTGGGCCAAGGCAGGAAGGCGCCCCCATGTGTGTGGCCTCAGTCTCAGCATCTGA
 321 CTGTGCTGCCCTGTCCCCAGGGAAGAGAATGAGGACCACGTGGACTCCGCCCACACAGAGCTGGCTGCTGTGCCCACCCT
 401 CAGGGGCGTCAGGAGACACAGCCTGGCCTCCTCAGGGCTGAAGATGCCTCCATTCGCCTGTGGACCTTGATTTCTAGATT
 481 TCAGTGTCAATAGACCTGTCTTCCTGCACACTTTCAGTTGGATGTGGGTCATTGTGGAGACAGAGGTGTCTGCCATCTCT
 561 GTGGCCTCTGGAGAGTGACGTCTCCCTGCTGGGAGTGCTGGTTCTCACGTGCGGTTTCCCTTGTGTATCGGAGCTCTTTC
 641 TCGGCTTTCTATTTCCCCCAGTTCTTTAAGCAGTCAATTGGCACAGAGTTTCCCACGGGGGCTGCAGTGGATTCACTGTG
 721 TCAGGGATGAGCCTGGCTTGGGGGTTGGTGGGGCTCTGAAGCGCATTTGGGGTTCTTTGTAGCTTCTAATGTGAGGTTTG
 801 AGTCCAGTGCGCCCACAGCAGCATGCCCTTCTCACCCCTTGCAGTGTTGCAGGCTCAGGCCCCTGGGCTCCTTCAGCAAG
 881 CAGGCTAGTCAATGAGGCATGAGGATCCGGCACAGGGCATCCCCTGGGGCTTCAAGGGCAATACCCCCGTGCTTAGGGTT
 961 TGCCCTGTGCCCTCTGGGTGGGGTGGCCTCCCCGCACTCGGCAGCATGGCCAGGCTGGCCAGGGCGTGGGCAGGTGGTGT
1041 CCTGTGGCACCTCCATCCTCCTGCCCAGCCGGCTGTGTCACACTCATCTTTTTAAGGTCAGGTTGGTTCCTGGCAAAAAT
1121 GTACCTCCAGGGGCCTCCAAGCATAGGATTTGGAAGACAGGAACGGCACAGGCGTCCAGGAAAGCAGCTGCACTCAGACA
1201 ATGCCTTCTCCATTACTTGAAGCTTCTTTCTGTTCAGCCATTAAAGAAACTTGACAAAATAGGAACAGGAGATATTTCTC
1281 AATTGTAAACCTTTGTGCAGGGACAGTTGGCTTCCAGAGGCTTTCAGCTTTCAGTTATTTGAGAAGTTTGTTTTAGATCC
1361 TTAACTAATATTTATGAATTCTCTCACCCTGTGTAAGTAGCCTGGTGTTCGTTTGTCCAAGTGTACTTACCCTTGAGAAC
1441 AAGTCTTGCAGTTGCCAGGTGTGTGCAGACGCCTCTCCTGTGAGCGGCATCGCGGGCCCAGTCAGCTGCCCCGGCTCTCA
1521 TCCTCGTCCTCACTGCCTTGGCTGAGCACTGTTGACGTGAACAGCCACTGCAACAGGCAGCCCATCCCACTGTCCCCTCT
1601 GCCCTGGACTCCGCATGGCCTCCAAAAGCCAGCTTGCCCTCCGGGTGCTGCAGGGGCTTTGCAGGTGGGGAAGGCTCTGG
1681 TGGGTGCCTTTGGTGGCTTCCGTGACATCAGCCGTGCTCTGATGCAGGCTTGCTCCCTCGTCATTCTCCCTCGTCATTCT
1761 CCCTCATCGTTCTGTGTGCATTTTTCTCTATGTCCTGACCTTTCTTCTTGCACCTAAAAGTGGTGTCTGGGTGCAAATGT
1841 AAGCAGTGGTGGATCCAGAAATATGAGCTTTGTGTAATAAGCTTCTTAAAACAGTCCTTTCTTACACCTGCCCAGGGCCA
1921 GACCCTCGGTCTTGGCCTTTTTCAGGAGCTAGGATATCTGCGCCTGGTGAAAATGAAACGAATTCCTGATTTAGGAATTC
2001 AGTGTTTCCTCCTCACTCCAGCTAAGCACTCACTTTTTTTTTTTTTTTTTTTTTTTTTTGATACAGAGTCTCGCTCTGTC
2081 ACCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCAAGCGATTCTTCTGCCTCAG
2161 CCTCCTGAGTAATTGGGATTACAGGCATGCGCCACCATGCCCAGCTAATTTTTTTTTTTTTTTTTGAGACAGAGTCTTGC
2241 TCTGTCTCCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTCACTGCCAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTG
2321 CCTCAGCCTCCCGAGTAGCCAGGACTACAAGCACCCGCCACCACACCTGGCTAATTTTTTTGTATTTTTATTAGAGACAG
2401 TGTTTTACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACTTCGTGATCTACTCACCTCGGCCTCCCAAAGTGCTGGGAT
2481 TACGGGCAAGTTTTTATTAGAGATGGGGTTTCATCATGTTGGTCAGGCTGGTCTTCAACTCCTGACCTCAGGTGATCCAC
2561 CCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCCTGAACTCTCAGTTCTAACGCAGGGA
2641 TTCAGGAATTGGGCTTTCAGACTCCTTCTGCAGTGTCACAGTCCAGACTTTTTTTAAATGAAGGACACCCCGCAGTGGCT
2721 CACAGTGGGTCCCAGGGCTAGCAGGAGCGTGCTGGGGAGCCGGCTCTGTCTTTGTTCGCAGTGGGTCCCGGTGCTGGCAG
2801 GAGTGTGCTGGTGAGCCGGCTCTGTCTTTGTAAATCCTTCAGGGGTCCTACGGCTGACTCCACCGGACAGCCCGTCCTGG
2881 GCCGTGTTAAGCACCTTTTGTAGAAATCGTATTTTTATTAAAACATCAAATCTGTGTTCCTGTAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aaGGUGACGAU---GUUGGAGGGUCu 5'
            :|||||| |   | |||||||:| 
Target 5' gcTCACTGCAAGCTCCACCTCCCGGg 3'
2112 - 2137 157.00 -26.20
2
miRNA  3' aagguGACGAUGUUGGAGGGUCu 5'
               :|||| | ::||||||| 
Target 5' gagtcTTGCT-CTGTCTCCCAGg 3'
2232 - 2253 157.00 -19.80
3
miRNA  3' aaGGU-GACGAUGUUGGAGGGUcu 5'
            ||| | ||  ||:|||||||  
Target 5' atCCACCCGCCTCAGCCTCCCAaa 3'
2555 - 2578 149.00 -25.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30518466 14 COSMIC
COSN19731313 89 COSMIC
COSN30127336 113 COSMIC
COSN16361399 118 COSMIC
COSN30457683 151 COSMIC
COSN30156186 154 COSMIC
COSN31553387 207 COSMIC
COSN8949293 398 COSMIC
COSN7757385 493 COSMIC
COSN29223594 747 COSMIC
COSN16693173 895 COSMIC
COSN7757344 984 COSMIC
COSN9892342 1200 COSMIC
COSN32104990 1449 COSMIC
COSN5057153 2429 COSMIC
COSN23875635 2932 COSMIC
COSN7757166 2940 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1217483662 3 dbSNP
rs769719359 7 dbSNP
rs1321535958 9 dbSNP
rs748239505 11 dbSNP
rs1227364394 13 dbSNP
rs781321272 16 dbSNP
rs373059197 20 dbSNP
rs370750898 21 dbSNP
rs377489540 22 dbSNP
rs780509928 24 dbSNP
rs1267987639 26 dbSNP
rs755196818 29 dbSNP
rs1211195002 31 dbSNP
rs1476916043 32 dbSNP
rs758949687 34 dbSNP
rs370693187 36 dbSNP
rs777363319 37 dbSNP
rs755627031 42 dbSNP
rs1165298965 46 dbSNP
rs988398821 48 dbSNP
rs752171439 49 dbSNP
rs1251538011 54 dbSNP
rs957136736 55 dbSNP
rs1386637135 60 dbSNP
rs564370470 62 dbSNP
rs1229339474 63 dbSNP
rs1035232281 65 dbSNP
rs1004110809 83 dbSNP
rs1305610511 91 dbSNP
rs906977999 100 dbSNP
rs376305449 106 dbSNP
rs1022690003 112 dbSNP
rs1012594015 128 dbSNP
rs1380903158 134 dbSNP
rs372837030 140 dbSNP
rs572275784 146 dbSNP
rs1326537022 150 dbSNP
rs559907558 151 dbSNP
rs1311080302 158 dbSNP
rs4865477 161 dbSNP
rs36033344 166 dbSNP
rs1397476422 167 dbSNP
rs897730339 171 dbSNP
rs576408933 173 dbSNP
rs1372905163 179 dbSNP
rs1181808388 181 dbSNP
rs1166138326 182 dbSNP
rs1040236124 184 dbSNP
rs1476443834 186 dbSNP
rs1416356353 187 dbSNP
rs556500677 191 dbSNP
rs539778529 197 dbSNP
rs570777520 205 dbSNP
rs944519775 206 dbSNP
rs1378699531 211 dbSNP
rs910362157 223 dbSNP
rs1307076539 234 dbSNP
rs769728248 238 dbSNP
rs554081045 239 dbSNP
rs1289465036 244 dbSNP
rs1344929988 248 dbSNP
rs4242021 267 dbSNP
rs1310376754 268 dbSNP
rs386670546 269 dbSNP
rs1204668034 274 dbSNP
rs1249933665 282 dbSNP
rs915246758 284 dbSNP
rs1233315643 285 dbSNP
rs568218855 286 dbSNP
rs548020805 287 dbSNP
rs1170806993 295 dbSNP
rs1232735798 301 dbSNP
rs1435146268 302 dbSNP
rs1336480815 306 dbSNP
rs1167519260 321 dbSNP
rs1368327954 323 dbSNP
rs957009091 335 dbSNP
rs1411061203 337 dbSNP
rs1309377898 339 dbSNP
rs1330065098 340 dbSNP
rs1234629140 344 dbSNP
rs531431686 359 dbSNP
rs1349004736 360 dbSNP
rs1228150539 361 dbSNP
rs1035666435 368 dbSNP
rs982323870 369 dbSNP
rs969976266 372 dbSNP
rs1289223453 378 dbSNP
rs1449987471 384 dbSNP
rs1196623555 386 dbSNP
rs1248415879 387 dbSNP
rs1454508131 388 dbSNP
rs1187702276 390 dbSNP
rs1388163990 396 dbSNP
rs1431242079 400 dbSNP
rs1168190246 405 dbSNP
rs1389351625 406 dbSNP
rs1403132522 407 dbSNP
rs568785897 408 dbSNP
rs772162958 417 dbSNP
rs1012624655 419 dbSNP
rs1295849868 426 dbSNP
rs1207988856 428 dbSNP
rs552131578 437 dbSNP
rs1463351873 448 dbSNP
rs1354290405 450 dbSNP
rs879534913 455 dbSNP
rs1291857777 456 dbSNP
rs993557749 460 dbSNP
rs1208094626 466 dbSNP
rs897766105 475 dbSNP
rs1451146223 479 dbSNP
rs1456949296 480 dbSNP
rs1363918844 481 dbSNP
rs1367557007 483 dbSNP
rs531945017 484 dbSNP
rs1164495218 491 dbSNP
rs944610833 498 dbSNP
rs1237188122 500 dbSNP
rs148010808 501 dbSNP
rs1319190650 503 dbSNP
rs1050213517 509 dbSNP
rs1383156134 510 dbSNP
rs946821785 514 dbSNP
rs915318474 515 dbSNP
rs532935511 524 dbSNP
rs1247343674 544 dbSNP
rs1293973107 544 dbSNP
rs1227680776 546 dbSNP
rs533502665 546 dbSNP
rs1266199228 550 dbSNP
rs1486698501 561 dbSNP
rs1205520525 579 dbSNP
rs1254963420 584 dbSNP
rs935308525 589 dbSNP
rs927960795 595 dbSNP
rs982781982 606 dbSNP
rs969629878 608 dbSNP
rs1157533047 609 dbSNP
rs1414867752 610 dbSNP
rs541288203 612 dbSNP
rs778845216 613 dbSNP
rs1400591658 619 dbSNP
rs1313763591 622 dbSNP
rs527923149 624 dbSNP
rs375096070 625 dbSNP
rs1304532696 630 dbSNP
rs56196042 631 dbSNP
rs1443548403 633 dbSNP
rs576397454 638 dbSNP
rs1325790486 642 dbSNP
rs951827449 643 dbSNP
rs1387807686 645 dbSNP
rs866385747 649 dbSNP
rs993237478 651 dbSNP
rs1179406370 652 dbSNP
rs1252133548 657 dbSNP
rs192893688 671 dbSNP
rs1176040087 672 dbSNP
rs541989400 677 dbSNP
rs1370202116 685 dbSNP
rs1408008615 687 dbSNP
rs370315380 688 dbSNP
rs1309925004 689 dbSNP
rs1379287556 689 dbSNP
rs576466736 696 dbSNP
rs1050283645 697 dbSNP
rs188475194 716 dbSNP
rs546243438 740 dbSNP
rs1351149881 744 dbSNP
rs1341024859 746 dbSNP
rs1202658575 749 dbSNP
rs1447450798 752 dbSNP
rs1480697642 759 dbSNP
rs1263766101 762 dbSNP
rs1203463632 763 dbSNP
rs1308096775 772 dbSNP
rs1455815619 775 dbSNP
rs1194663556 788 dbSNP
rs1350121195 791 dbSNP
rs1428047506 795 dbSNP
rs1170768337 797 dbSNP
rs1355155764 800 dbSNP
rs1052964481 807 dbSNP
rs778382151 810 dbSNP
rs756708372 819 dbSNP
rs927959052 823 dbSNP
rs1303859351 828 dbSNP
rs577263519 835 dbSNP
rs1225691258 841 dbSNP
rs948343306 855 dbSNP
rs1307518271 856 dbSNP
rs781647627 858 dbSNP
rs1431953357 859 dbSNP
rs984278572 864 dbSNP
rs1470220478 870 dbSNP
rs1328702165 871 dbSNP
rs1316910058 872 dbSNP
rs754585737 877 dbSNP
rs918726590 885 dbSNP
rs972231938 892 dbSNP
rs1188463144 894 dbSNP
rs1436141813 898 dbSNP
rs183469487 901 dbSNP
rs961781196 908 dbSNP
rs1423259121 910 dbSNP
rs1162775546 913 dbSNP
rs762831889 914 dbSNP
rs1462929939 915 dbSNP
rs1326543950 931 dbSNP
rs1475658543 939 dbSNP
rs372986518 941 dbSNP
rs1223949817 944 dbSNP
rs1432664938 948 dbSNP
rs953302456 949 dbSNP
rs1362235425 965 dbSNP
rs1028893712 970 dbSNP
rs1309934960 972 dbSNP
rs1487986136 974 dbSNP
rs568211308 990 dbSNP
rs1010802937 991 dbSNP
rs554726410 992 dbSNP
rs1463785049 993 dbSNP
rs1369372077 994 dbSNP
rs1242849566 996 dbSNP
rs1483045220 997 dbSNP
rs751288081 999 dbSNP
rs75307695 1000 dbSNP
rs1000058784 1001 dbSNP
rs1411169276 1012 dbSNP
rs1398672598 1013 dbSNP
rs1161020789 1015 dbSNP
rs906610916 1018 dbSNP
rs568945944 1020 dbSNP
rs1341967280 1024 dbSNP
rs552650960 1026 dbSNP
rs1356767374 1031 dbSNP
rs948040008 1039 dbSNP
rs1227285029 1050 dbSNP
rs769663709 1057 dbSNP
rs916558312 1058 dbSNP
rs1226043902 1069 dbSNP
rs1285378456 1070 dbSNP
rs1356684263 1071 dbSNP
rs1208233719 1077 dbSNP
rs1259903615 1079 dbSNP
rs551956503 1085 dbSNP
rs1181559735 1101 dbSNP
rs1249800588 1111 dbSNP
rs1468527295 1122 dbSNP
rs1178924679 1125 dbSNP
rs534288485 1137 dbSNP
rs200070138 1138 dbSNP
rs1171304878 1142 dbSNP
rs1376906685 1143 dbSNP
rs541516258 1144 dbSNP
rs1306866866 1147 dbSNP
rs116345743 1164 dbSNP
rs141358038 1165 dbSNP
rs918753490 1167 dbSNP
rs1217846392 1168 dbSNP
rs201815855 1174 dbSNP
rs1410302642 1176 dbSNP
rs192395704 1178 dbSNP
rs1272540416 1180 dbSNP
rs940468610 1191 dbSNP
rs1477428812 1194 dbSNP
rs1418507288 1199 dbSNP
rs987157360 1201 dbSNP
rs953041037 1232 dbSNP
rs1454437950 1235 dbSNP
rs1167629715 1236 dbSNP
rs1393643194 1238 dbSNP
rs562179636 1240 dbSNP
rs372890396 1246 dbSNP
rs1330072403 1247 dbSNP
rs1349812085 1255 dbSNP
rs1439421561 1258 dbSNP
rs529105768 1259 dbSNP
rs1237093657 1273 dbSNP
rs1227911575 1278 dbSNP
rs1268674231 1283 dbSNP
rs989401675 1288 dbSNP
rs1196471375 1290 dbSNP
rs56233961 1291 dbSNP
rs1450961707 1306 dbSNP
rs765111072 1314 dbSNP
rs957940679 1329 dbSNP
rs1254625445 1344 dbSNP
rs1468775341 1350 dbSNP
rs1187487868 1360 dbSNP
rs1038802842 1368 dbSNP
rs1031287768 1381 dbSNP
rs138895483 1385 dbSNP
rs1007355451 1387 dbSNP
rs887688554 1389 dbSNP
rs999355500 1390 dbSNP
rs1328561724 1391 dbSNP
rs1395628763 1392 dbSNP
rs1198423674 1402 dbSNP
rs1434859616 1409 dbSNP
rs1316423326 1410 dbSNP
rs558797916 1411 dbSNP
rs931286405 1425 dbSNP
rs1283661883 1426 dbSNP
rs1012257538 1432 dbSNP
rs878866693 1435 dbSNP
rs1274999952 1440 dbSNP
rs1295722960 1442 dbSNP
rs187970435 1448 dbSNP
rs895159418 1451 dbSNP
rs1259477693 1455 dbSNP
rs1353076893 1459 dbSNP
rs1448355344 1464 dbSNP
rs918622274 1468 dbSNP
rs1037451457 1470 dbSNP
rs1359091069 1471 dbSNP
rs938710399 1471 dbSNP
rs928713633 1475 dbSNP
rs1337190639 1478 dbSNP
rs1419229881 1479 dbSNP
rs1456985875 1485 dbSNP
rs1157189333 1486 dbSNP
rs980259898 1492 dbSNP
rs948907521 1493 dbSNP
rs146119978 1494 dbSNP
rs1416714196 1495 dbSNP
rs990445569 1501 dbSNP
rs577349779 1503 dbSNP
rs560489531 1506 dbSNP
rs987230969 1507 dbSNP
rs1335385679 1509 dbSNP
rs1238310848 1510 dbSNP
rs1031313202 1512 dbSNP
rs1167073893 1513 dbSNP
rs1352619016 1522 dbSNP
rs540560417 1525 dbSNP
rs573699164 1526 dbSNP
rs965733929 1526 dbSNP
rs1413110127 1529 dbSNP
rs1257689338 1548 dbSNP
rs1177872623 1552 dbSNP
rs182180117 1556 dbSNP
rs1030901168 1557 dbSNP
rs147139106 1563 dbSNP
rs1007344305 1574 dbSNP
rs554530865 1578 dbSNP
rs1178404608 1584 dbSNP
rs970600085 1586 dbSNP
rs1373872630 1587 dbSNP
rs1027969394 1592 dbSNP
rs1436888915 1596 dbSNP
rs1275575518 1603 dbSNP
rs1212413991 1605 dbSNP
rs1024730364 1609 dbSNP
rs993398733 1612 dbSNP
rs897740383 1613 dbSNP
rs1223869111 1614 dbSNP
rs1352314255 1616 dbSNP
rs538064978 1618 dbSNP
rs1037002493 1622 dbSNP
rs369552926 1632 dbSNP
rs907286033 1636 dbSNP
rs1239525907 1637 dbSNP
rs1279087177 1638 dbSNP
rs1306716297 1640 dbSNP
rs1345291557 1641 dbSNP
rs760397888 1642 dbSNP
rs1280392437 1643 dbSNP
rs995453023 1653 dbSNP
rs1371507094 1656 dbSNP
rs1253302295 1673 dbSNP
rs1419978497 1680 dbSNP
rs1198589875 1686 dbSNP
rs897421884 1688 dbSNP
rs1438556538 1692 dbSNP
rs1349237843 1695 dbSNP
rs948853426 1700 dbSNP
rs1037303020 1701 dbSNP
rs575296183 1702 dbSNP
rs536975674 1712 dbSNP
rs1296325006 1713 dbSNP
rs558273152 1714 dbSNP
rs924864099 1716 dbSNP
rs1302401912 1727 dbSNP
rs376917867 1728 dbSNP
rs1236003289 1729 dbSNP
rs1454959150 1735 dbSNP
rs1306365018 1736 dbSNP
rs538345173 1738 dbSNP
rs1192175888 1739 dbSNP
rs1053474787 1740 dbSNP
rs965722862 1740 dbSNP
rs1213673721 1752 dbSNP
rs566161512 1753 dbSNP
rs1470131282 1754 dbSNP
rs1215881479 1756 dbSNP
rs936369931 1758 dbSNP
rs1052368529 1766 dbSNP
rs1462415148 1766 dbSNP
rs371607452 1766 dbSNP
rs554875983 1766 dbSNP
rs978042321 1768 dbSNP
rs1318264358 1769 dbSNP
rs1442861581 1769 dbSNP
rs1326083467 1770 dbSNP
rs1360830432 1773 dbSNP
rs1212500819 1779 dbSNP
rs1283395434 1790 dbSNP
rs971012333 1804 dbSNP
rs1238920458 1807 dbSNP
rs1271847661 1808 dbSNP
rs917788529 1810 dbSNP
rs990605717 1811 dbSNP
rs1241969887 1812 dbSNP
rs959476091 1813 dbSNP
rs115960781 1821 dbSNP
rs1366812408 1825 dbSNP
rs995971779 1826 dbSNP
rs1289431635 1827 dbSNP
rs1432948494 1829 dbSNP
rs961412159 1838 dbSNP
rs1015974439 1848 dbSNP
rs1297695858 1849 dbSNP
rs1435519112 1850 dbSNP
rs535838733 1852 dbSNP
rs891366202 1857 dbSNP
rs1049951471 1864 dbSNP
rs1413641217 1876 dbSNP
rs773469798 1876 dbSNP
rs1433039411 1881 dbSNP
rs1234503634 1887 dbSNP
rs1315550085 1888 dbSNP
rs1420837461 1888 dbSNP
rs1188838986 1890 dbSNP
rs1180182188 1894 dbSNP
rs997001312 1896 dbSNP
rs1260339724 1898 dbSNP
rs893286266 1915 dbSNP
rs1053548407 1920 dbSNP
rs936383882 1923 dbSNP
rs1472467315 1926 dbSNP
rs1282101000 1927 dbSNP
rs11944476 1928 dbSNP
rs1160763813 1935 dbSNP
rs1360768759 1937 dbSNP
rs10026782 1945 dbSNP
rs1042444523 1948 dbSNP
rs949364232 1949 dbSNP
rs1311439047 1955 dbSNP
rs372418799 1961 dbSNP
rs1216219018 1962 dbSNP
rs1415906406 1966 dbSNP
rs1279521860 1979 dbSNP
rs917818278 1980 dbSNP
rs1338364080 1982 dbSNP
rs186321979 1986 dbSNP
rs1347410840 1988 dbSNP
rs1209056622 1990 dbSNP
rs1282524470 2003 dbSNP
rs1415484256 2009 dbSNP
rs1486057061 2015 dbSNP
rs1210665156 2020 dbSNP
rs1377501440 2022 dbSNP
rs1301376152 2028 dbSNP
rs1178719013 2029 dbSNP
rs1465838638 2032 dbSNP
rs1380749551 2033 dbSNP
rs1376702532 2034 dbSNP
rs868283199 2034 dbSNP
rs1355435925 2046 dbSNP
rs1328704167 2057 dbSNP
rs1173015252 2058 dbSNP
rs11736298 2059 dbSNP
rs1189908043 2060 dbSNP
rs1206601746 2060 dbSNP
rs1214064420 2060 dbSNP
rs1232316051 2060 dbSNP
rs1238534336 2060 dbSNP
rs1271050297 2060 dbSNP
rs1305923282 2060 dbSNP
rs1348603314 2060 dbSNP
rs1370772037 2060 dbSNP
rs1416831747 2060 dbSNP
rs1435998248 2060 dbSNP
rs1467895927 2060 dbSNP
rs1491146544 2060 dbSNP
rs5855720 2060 dbSNP
rs1172052151 2061 dbSNP
rs1491470104 2061 dbSNP
rs1394142159 2062 dbSNP
rs1427193542 2065 dbSNP
rs1328090234 2066 dbSNP
rs1331893912 2069 dbSNP
rs1423540448 2072 dbSNP
rs990636789 2077 dbSNP
rs1192294408 2091 dbSNP
rs1220352981 2094 dbSNP
rs1258657273 2096 dbSNP
rs959215113 2097 dbSNP
rs1211596793 2102 dbSNP
rs919729918 2103 dbSNP
rs1451797707 2104 dbSNP
rs1198411633 2107 dbSNP
rs1482743200 2108 dbSNP
rs1251626740 2110 dbSNP
rs1206379138 2111 dbSNP
rs1417774727 2118 dbSNP
rs1315917150 2119 dbSNP
rs1391969526 2132 dbSNP
rs1316544802 2133 dbSNP
rs1257423092 2134 dbSNP
rs1400705385 2135 dbSNP
rs1233966682 2144 dbSNP
rs1357507507 2145 dbSNP
rs1310699930 2148 dbSNP
rs531943780 2149 dbSNP
rs1395618349 2154 dbSNP
rs183460098 2161 dbSNP
rs1204136019 2164 dbSNP
rs191207354 2165 dbSNP
rs1281715479 2166 dbSNP
rs961718994 2167 dbSNP
rs1193744778 2169 dbSNP
rs1464452515 2173 dbSNP
rs1256259291 2178 dbSNP
rs1474498327 2180 dbSNP
rs1190752456 2186 dbSNP
rs186825743 2187 dbSNP
rs1369375047 2189 dbSNP
rs1400195698 2190 dbSNP
rs560505968 2191 dbSNP
rs1387421812 2192 dbSNP
rs924152573 2194 dbSNP
rs1284996636 2202 dbSNP
rs1186491607 2208 dbSNP
rs1369653450 2209 dbSNP
rs1015631406 2211 dbSNP
rs1412812838 2226 dbSNP
rs1472801997 2226 dbSNP
rs35144888 2226 dbSNP
rs397810663 2226 dbSNP
rs543250829 2226 dbSNP
rs1287211843 2227 dbSNP
rs1355386085 2227 dbSNP
rs1184809380 2228 dbSNP
rs1278956822 2232 dbSNP
rs1484423819 2233 dbSNP
rs71606378 2234 dbSNP
rs1257503239 2235 dbSNP
rs1422819414 2238 dbSNP
rs1008635176 2240 dbSNP
rs755138738 2242 dbSNP
rs1250802174 2247 dbSNP
rs1178727131 2250 dbSNP
rs1440531234 2256 dbSNP
rs1173280643 2257 dbSNP
rs1393292647 2260 dbSNP
rs1456323952 2264 dbSNP
rs574711843 2268 dbSNP
rs1253777363 2269 dbSNP
rs1326578804 2272 dbSNP
rs201372635 2274 dbSNP
rs181590569 2276 dbSNP
rs1240374903 2277 dbSNP
rs1302267854 2283 dbSNP
rs1345050354 2287 dbSNP
rs1234792595 2288 dbSNP
rs1256146144 2290 dbSNP
rs1480585568 2293 dbSNP
rs544136086 2294 dbSNP
rs1240369729 2296 dbSNP
rs1458509931 2300 dbSNP
rs955633738 2306 dbSNP
rs1251378519 2308 dbSNP
rs1455795952 2309 dbSNP
rs1176857876 2310 dbSNP
rs1372624097 2311 dbSNP
rs1461391339 2317 dbSNP
rs575444730 2324 dbSNP
rs997073323 2328 dbSNP
rs1447268014 2332 dbSNP
rs558310051 2333 dbSNP
rs1317736373 2335 dbSNP
rs538383959 2344 dbSNP
rs1000660988 2348 dbSNP
rs1309495987 2350 dbSNP
rs1444998545 2352 dbSNP
rs1306458188 2353 dbSNP
rs1225810915 2356 dbSNP
rs190783686 2364 dbSNP
rs1213455221 2375 dbSNP
rs1251580075 2380 dbSNP
rs1042084063 2382 dbSNP
rs1489573882 2382 dbSNP
rs552622382 2384 dbSNP
rs1261078128 2386 dbSNP
rs186385314 2393 dbSNP
rs567111901 2398 dbSNP
rs896131633 2410 dbSNP
rs1425700537 2422 dbSNP
rs548903753 2428 dbSNP
rs149119424 2429 dbSNP
rs180786009 2430 dbSNP
rs1163930352 2435 dbSNP
rs937894742 2443 dbSNP
rs1459095325 2444 dbSNP
rs748760525 2453 dbSNP
rs1293771280 2459 dbSNP
rs1160139540 2464 dbSNP
rs1360592430 2465 dbSNP
rs1437560701 2466 dbSNP
rs1237285957 2472 dbSNP
rs781400950 2475 dbSNP
rs1194039221 2476 dbSNP
rs974307560 2482 dbSNP
rs1233259572 2484 dbSNP
rs1271624031 2486 dbSNP
rs940150904 2488 dbSNP
rs749417533 2493 dbSNP
rs1222525035 2495 dbSNP
rs755315089 2496 dbSNP
rs986883051 2499 dbSNP
rs1218889170 2504 dbSNP
rs1264068810 2507 dbSNP
rs1478094679 2508 dbSNP
rs1187187155 2509 dbSNP
rs955371475 2509 dbSNP
rs569499902 2511 dbSNP
rs1028295018 2514 dbSNP
rs552787225 2517 dbSNP
rs561682590 2524 dbSNP
rs1265260472 2527 dbSNP
rs1344232363 2550 dbSNP
rs1417543177 2556 dbSNP
rs1360649025 2557 dbSNP
rs1414658713 2570 dbSNP
rs1291999942 2582 dbSNP
rs532715149 2584 dbSNP
rs1229257858 2585 dbSNP
rs975666549 2590 dbSNP
rs1315340858 2591 dbSNP
rs957607310 2593 dbSNP
rs560588199 2605 dbSNP
rs1209997360 2606 dbSNP
rs1262682595 2607 dbSNP
rs529926864 2608 dbSNP
rs1182218775 2610 dbSNP
rs902284180 2611 dbSNP
rs568523579 2612 dbSNP
rs1021141223 2613 dbSNP
rs188332233 2617 dbSNP
rs896161215 2620 dbSNP
rs1054677393 2621 dbSNP
rs1332697524 2624 dbSNP
rs1361405444 2631 dbSNP
rs1449484336 2632 dbSNP
rs1329853315 2633 dbSNP
rs937968136 2634 dbSNP
rs1371683426 2635 dbSNP
rs1242533786 2636 dbSNP
rs1310294953 2644 dbSNP
rs779643422 2653 dbSNP
rs1232173421 2654 dbSNP
rs530113906 2660 dbSNP
rs1385105309 2661 dbSNP
rs534582412 2662 dbSNP
rs1232049696 2667 dbSNP
rs1180059311 2670 dbSNP
rs908344906 2670 dbSNP
rs987298640 2672 dbSNP
rs561124568 2673 dbSNP
rs113579561 2681 dbSNP
rs934024137 2691 dbSNP
rs28690562 2695 dbSNP
rs1398499284 2696 dbSNP
rs530702579 2698 dbSNP
rs1332539391 2703 dbSNP
rs975403882 2704 dbSNP
rs957636760 2706 dbSNP
rs1276658616 2710 dbSNP
rs371723292 2711 dbSNP
rs544826893 2712 dbSNP
rs977677850 2714 dbSNP
rs1315763494 2725 dbSNP
rs115557994 2731 dbSNP
rs1281400202 2734 dbSNP
rs1196360209 2736 dbSNP
rs1247909642 2740 dbSNP
rs552661137 2745 dbSNP
rs1013288577 2748 dbSNP
rs1343377099 2749 dbSNP
rs1467693798 2756 dbSNP
rs764768229 2760 dbSNP
rs542349909 2761 dbSNP
rs1033336212 2762 dbSNP
rs1228747742 2767 dbSNP
rs1001808070 2772 dbSNP
rs1430107800 2774 dbSNP
rs1279463580 2777 dbSNP
rs1338318770 2778 dbSNP
rs1397665366 2781 dbSNP
rs573627080 2789 dbSNP
rs1207651935 2790 dbSNP
rs1291600550 2792 dbSNP
rs1451615852 2796 dbSNP
rs556661189 2801 dbSNP
rs1260468949 2803 dbSNP
rs1479069081 2804 dbSNP
rs1415927405 2809 dbSNP
rs1417529928 2812 dbSNP
rs1399744271 2813 dbSNP
rs1472021458 2815 dbSNP
rs1165148774 2817 dbSNP
rs538564226 2818 dbSNP
rs1400406341 2823 dbSNP
rs1296399058 2828 dbSNP
rs1462383533 2829 dbSNP
rs184358371 2837 dbSNP
rs1050914530 2842 dbSNP
rs1191595189 2847 dbSNP
rs934098135 2851 dbSNP
rs763941734 2856 dbSNP
rs149774348 2861 dbSNP
rs921335942 2862 dbSNP
rs529340167 2863 dbSNP
rs1039748991 2864 dbSNP
rs115329880 2865 dbSNP
rs1189930216 2868 dbSNP
rs925947721 2870 dbSNP
rs567027982 2873 dbSNP
rs917444192 2874 dbSNP
rs1190037750 2878 dbSNP
rs1196746489 2880 dbSNP
rs1369458297 2882 dbSNP
rs1320613568 2884 dbSNP
rs1157115606 2889 dbSNP
rs1382201142 2901 dbSNP
rs992947662 2905 dbSNP
rs960468806 2908 dbSNP
rs1033409699 2909 dbSNP
rs1394267299 2912 dbSNP
rs1256775022 2925 dbSNP
rs1340873920 2928 dbSNP
rs1216227200 2931 dbSNP
rs1339323227 2934 dbSNP
rs1293405662 2936 dbSNP
rs1449703694 2938 dbSNP
rs1001883180 2940 dbSNP
rs1355140955 2944 dbSNP
rs962702758 2946 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 3954.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aaggugacgauguugGAGGGUCu 5'
                         ||||||| 
Target 5' ---------------CUCCCAGg 3'
1 - 8
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000302787.2 | 3UTR | CUCCCAGGCUGGAGUGCAAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC 0.946 0.11 1.000 0.5 3 Click to see details
HNSC 0.946 0.11 1.000 0.5 3 Click to see details
HNSC 0.946 0.11 1.000 0.5 3 Click to see details
HNSC 0.946 0.11 1.000 0.5 3 Click to see details
HNSC 0.946 0.11 1.000 0.5 3 Click to see details
HNSC 0.946 0.11 1.000 0.5 3 Click to see details
HNSC 0.946 0.11 1.000 0.5 3 Click to see details
HNSC 0.946 0.11 1.000 0.5 3 Click to see details
HNSC 0.946 0.11 1.000 0.5 3 Click to see details
167 hsa-miR-3192-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058548 CTTNBP2NL CTTNBP2 N-terminal like 2 2
MIRT139892 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT207395 MAT2A methionine adenosyltransferase 2A 2 6
MIRT294640 ZNF548 zinc finger protein 548 2 2
MIRT324251 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT441475 BEST3 bestrophin 3 2 2
MIRT445233 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT446763 ZNF491 zinc finger protein 491 2 2
MIRT451003 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 2
MIRT452436 QDPR quinoid dihydropteridine reductase 2 2
MIRT452582 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452950 DISC1 disrupted in schizophrenia 1 2 2
MIRT453309 ZNF394 zinc finger protein 394 2 2
MIRT453810 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT454101 TMEM209 transmembrane protein 209 2 2
MIRT456228 LIX1L limb and CNS expressed 1 like 2 4
MIRT456738 TMEM239 transmembrane protein 239 2 2
MIRT456806 SIGLEC14 sialic acid binding Ig like lectin 14 2 4
MIRT457499 SLC35F6 solute carrier family 35 member F6 2 2
MIRT458037 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459041 ZNF490 zinc finger protein 490 2 2
MIRT459135 FADS6 fatty acid desaturase 6 2 2
MIRT460126 CXCL16 C-X-C motif chemokine ligand 16 2 2
MIRT460506 FAM105A family with sequence similarity 105 member A 2 6
MIRT460944 NOA1 nitric oxide associated 1 2 4
MIRT461101 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462641 PHF5A PHD finger protein 5A 2 2
MIRT463584 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT466567 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467090 SRRD SRR1 domain containing 2 2
MIRT471093 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472596 NACC1 nucleus accumbens associated 1 2 2
MIRT473084 MORN4 MORN repeat containing 4 2 2
MIRT475977 GTPBP2 GTP binding protein 2 2 2
MIRT477054 FAM210A family with sequence similarity 210 member A 2 2
MIRT478303 DDX19A DEAD-box helicase 19A 2 4
MIRT478489 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478500 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT478858 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479096 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT479180 CLSPN claspin 2 2
MIRT479215 CLCC1 chloride channel CLIC like 1 2 2
MIRT481176 AVL9 AVL9 cell migration associated 2 6
MIRT483032 KHSRP KH-type splicing regulatory protein 2 4
MIRT485150 RASL10B RAS like family 10 member B 2 2
MIRT486104 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486319 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT489443 IFNLR1 interferon lambda receptor 1 2 2
MIRT489585 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489702 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490184 TMEM63C transmembrane protein 63C 2 2
MIRT491211 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491276 DHX40 DEAH-box helicase 40 2 2
MIRT495162 CNGA2 cyclic nucleotide gated channel alpha 2 2 4
MIRT495222 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT496820 CHRNB2 cholinergic receptor nicotinic beta 2 subunit 2 2
MIRT498602 KRT8 keratin 8 2 2
MIRT500003 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT502065 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT508197 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508477 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT509635 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT511039 NRF1 nuclear respiratory factor 1 2 2
MIRT516684 ZNF860 zinc finger protein 860 2 4
MIRT518394 ZNF250 zinc finger protein 250 2 2
MIRT518907 CDC14B cell division cycle 14B 2 2
MIRT520502 TRAM2 translocation associated membrane protein 2 2 6
MIRT521459 RAD51 RAD51 recombinase 2 2
MIRT522354 NCKIPSD NCK interacting protein with SH3 domain 2 4
MIRT522594 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT523267 HIST1H2AE histone cluster 1 H2A family member e 2 2
MIRT523532 GLUL glutamate-ammonia ligase 2 4
MIRT524186 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT526842 PHC1 polyhomeotic homolog 1 2 2
MIRT528729 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT540695 BMP3 bone morphogenetic protein 3 2 2
MIRT544483 TRIM4 tripartite motif containing 4 2 2
MIRT551566 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT563619 ZNF277 zinc finger protein 277 2 2
MIRT564467 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565031 VAV2 vav guanine nucleotide exchange factor 2 2 2
MIRT570294 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT572932 VDAC2 voltage dependent anion channel 2 2 2
MIRT573501 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573675 HES6 hes family bHLH transcription factor 6 2 2
MIRT609619 TRPC4AP transient receptor potential cation channel subfamily C member 4 associated protein 2 2
MIRT611966 PKD1 polycystin 1, transient receptor potential channel interacting 2 2
MIRT613930 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT617733 ATCAY ATCAY, caytaxin 2 4
MIRT618878 MBL2 mannose binding lectin 2 2 2
MIRT627590 SHROOM3 shroom family member 3 2 2
MIRT628516 ZNF878 zinc finger protein 878 2 2
MIRT633964 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT634530 NEGR1 neuronal growth regulator 1 2 2
MIRT635455 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT636412 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT639672 PPEF2 protein phosphatase with EF-hand domain 2 2 6
MIRT642667 RGS6 regulator of G protein signaling 6 2 2
MIRT644080 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT647318 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647942 RNF152 ring finger protein 152 2 2
MIRT648687 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT648817 ZNF689 zinc finger protein 689 2 2
MIRT650347 TREM1 triggering receptor expressed on myeloid cells 1 2 2
MIRT650374 MOCS3 molybdenum cofactor synthesis 3 2 4
MIRT655935 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT663778 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT664297 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT665842 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT668929 COL9A2 collagen type IX alpha 2 chain 2 2
MIRT669673 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669907 KIAA0754 KIAA0754 2 4
MIRT670248 TRIM13 tripartite motif containing 13 2 2
MIRT670368 ULBP3 UL16 binding protein 3 2 4
MIRT670642 BVES blood vessel epicardial substance 2 2
MIRT670749 HOOK3 hook microtubule tethering protein 3 2 2
MIRT671184 ZNF891 zinc finger protein 891 2 2
MIRT673946 ZNF500 zinc finger protein 500 2 2
MIRT674682 PLCE1 phospholipase C epsilon 1 2 2
MIRT677912 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678876 FAM118A family with sequence similarity 118 member A 2 2
MIRT679528 RAB36 RAB36, member RAS oncogene family 2 2
MIRT680589 ZNF573 zinc finger protein 573 2 2
MIRT680650 KIAA1456 KIAA1456 2 2
MIRT681149 INTS7 integrator complex subunit 7 2 2
MIRT681177 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681234 DUSP19 dual specificity phosphatase 19 2 2
MIRT681626 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681643 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT681926 KAT7 lysine acetyltransferase 7 2 2
MIRT682050 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT682156 SMS spermine synthase 2 2
MIRT683555 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684304 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT684458 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT685986 CCDC77 coiled-coil domain containing 77 2 2
MIRT686782 AZF1 azoospermia factor 1 2 2
MIRT687329 OSMR oncostatin M receptor 2 2
MIRT687629 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT688792 CCNB1 cyclin B1 2 2
MIRT689756 PRR13 proline rich 13 2 2
MIRT690823 SGSM2 small G protein signaling modulator 2 2 2
MIRT691310 ZNF681 zinc finger protein 681 2 2
MIRT692676 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT693508 MOB3A MOB kinase activator 3A 2 2
MIRT694657 C14orf119 chromosome 14 open reading frame 119 2 2
MIRT694889 ZNF417 zinc finger protein 417 2 2
MIRT695740 ZNF117 zinc finger protein 117 2 2
MIRT697101 GPKOW G-patch domain and KOW motifs 2 2
MIRT698968 SPAST spastin 2 2
MIRT700379 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT703930 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT706234 SYT15 synaptotagmin 15 2 2
MIRT706494 SEPT6 septin 6 2 2
MIRT710451 BTNL3 butyrophilin like 3 2 2
MIRT711684 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT711997 F9 coagulation factor IX 2 2
MIRT712727 NCAPG2 non-SMC condensin II complex subunit G2 2 2
MIRT713111 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT713156 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT713440 AJAP1 adherens junctions associated protein 1 2 2
MIRT713830 NUP98 nucleoporin 98 2 2
MIRT714979 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717411 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT718433 ZNF85 zinc finger protein 85 2 2
MIRT720575 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT725098 TMEM120B transmembrane protein 120B 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3192 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3192 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-3192 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3192-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3192-5p Platinum 23939 resistant tissue
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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