pre-miRNA Information
pre-miRNA hsa-mir-1185-1   
Genomic Coordinates chr14: 101042977 - 101043062
Synonyms MIRN1185-1, hsa-mir-1185-1, MIR1185-1
Description Homo sapiens miR-1185-1 stem-loop
Comment This sequence was proposed as a miRNA candidate by Berezikov et al by RAKE analysis .
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1185-1-3p
Sequence 53| AUAUACAGGGGGAGACUCUUAU |74
Evidence Not_experimental
Experiments
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 5 14 + 101043033 29233923 MiREDiBase
A-to-I 7 14 + 101043035 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs749794228 1 dbSNP
rs369414498 4 dbSNP
rs771096180 5 dbSNP
rs774958411 7 dbSNP
rs1226171972 11 dbSNP
rs1449899083 14 dbSNP
rs761183893 16 dbSNP
rs1380874583 20 dbSNP
rs771625921 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF136   
Synonyms pHZ-20
Description zinc finger protein 136
Transcript NM_003437   
Expression
Putative miRNA Targets on ZNF136
3'UTR of ZNF136
(miRNA target sites are highlighted)
>ZNF136|NM_003437|3'UTR
   1 TGCTCTGGGTTCATGTCAGATACATTAAAATACTCACTGAAGAGAAGCCCTATGAATGTAAGTAACGTGGGAAAGCATGA
  81 AATTCTGTCAGTGCCTTTTTTAATACATGAAAGAATTCTAGAGAGAAGCCATATACATGTAAGTAACATGGGAAAGCTTT
 161 CAATCATTTTAGTTCCTTTCAAATACATGAAAGAACTCATCATGGAGAAAACCAAACAAATGCTTTTTGGAAAGGAACCC
 241 ATATTTGAGAGAAACCCTGGGTAAAGGGTGTAGGAAAGGTTTTGTCATCACACAACCCTGTCACACATGAATGTGTAGTG
 321 GAGAGAACCTTGGTAAATGTAAAGAGTGTGGGAGAGCCTTTAGTCATTTTAGTTCCACTTGAAGCCATGAAAGAACACAC
 401 AAAAGAGAAAGCTCTTGAATATAAGCAATGTCCACACGTTTTTAGCCAGCCCACATGCTTTCAACAACATGTAAGAATGT
 481 ACCCTGGATCAAAACACTATAAATGTGAAAACTACAAGGAAGGTTTTCCATTATACTTTTAAAGTCATTTGAGGGCTCTG
 561 GCTCTGTGGCTTTGTGGGTTAAAGTACTTGTCTGGCAAACAGGAGATGCTGGATTTCAATCCCAGCAGGGCCTCACTAGT
 641 TGAGGTATTGAATTTGAACAGATGTTTTGGCTCTGGCTGGGTGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGG
 721 CTGAGGCAGGAGGATCACTTGAGGTCAGGAGTTTGAGACCAGTGTGCAAAACATAGCAAGACCTCATCTCAGAAAAAAAA
 801 AAAAAGTCATTTGAAAACTTCTAATACAGCAAAATCCTATAAATGTAAGTACTTCAAAAAGCCTCATGCATAGCGGGTCA
 881 TGTAGTCTCTAGAAAATACATAACCTGATGGAAATGTAGAAGCTATATGTATATTTTGTTAATTAGTGGCTCATATTTAA
 961 AATAGTTCTCTGACTATGGATTTCAAATGCTTAATCTCACAAAGAAATGTTAAATTGATATAATCCTGTAAGTAATCTGA
1041 AAGCAATAGTGCATGAATTTCATAGGTAGTGTTGTTTTAGGTCAGTAAATAAAATATTTGTCTTTCCATTTTGAAATGTG
1121 TTTAATCCAACAATGAATTTAAATGTGTTTCTCATATTCAGGTATGTTAAATTGTATATGGTTGCTTAATTGTTCTGTGA
1201 TTGAGGACCACTGAAAAATAAGTCTTAATAAATGTTGGTATGAACCTACTTGCTTCATTTAGCAGGTTCTTGATTCCCTT
1281 TCCACATTATATACATTCCATCATATTTATTGGAACAGCTCCTTTTTTTTCCTTTTTTCTTTTTTCTTTCTTCTTTTTTC
1361 TTTTTGAGACAGGGTCTCGCTCTGTGCTCTGTTGCCCAAGCTGGAGTACAGTGGCATGATCTCGGCTCATTGCAACCTCT
1441 GCCTTCTGGGTTCAAGTGATTCTCCCACCTTAGCCTCCTAGGAAGCTGGGACTACAGGCATGTGCCACCACACCTGGCTA
1521 ATTTTTTGTATTTCTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTAGAACTCCTGACCTCAAGTGATCCACCC
1601 ACCTCAGCCTCCTAAAGTCTGGGATTACACGTGTGAGCCATCACACCTAGCCCATTTTTTTTTTCTTGGCTCAAATAATT
1681 TTATTTTGCTTCCTATTAAAGAGTTGTTGTTAATTCTAAGTATGTAAAGTTTATCACAGACTGTAGTCTCGTGAATTATT
1761 ATTTTAACCTGTTGTTCTTTACTCCTTGTTATTTATTCTGGCTGCTCTTTGTATAATTGATTTTGGGATAAGGAGACAGC
1841 TATGATAGAATAATAAAATCTAAAATGGGAGATGCCTTTC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uauucuCAGA-GGGGGACAUAUa 5'
                | || |:|::|||||| 
Target 5' tattctGGCTGCTCTTTGTATAa 3'
1794 - 1816 140.00 -11.60
2
miRNA  3' uaUUCUCAGAGGGGGACAUAUa 5'
            |:|  | |:   :|||||| 
Target 5' tcAGGTATGTTAAATTGTATAt 3'
1158 - 1179 128.00 -6.40
3
miRNA  3' uauUCUCAGAGGGGGACAUaua 5'
             ||:||||| |:||||:   
Target 5' gacAGGGTCTCGCTCTGTGctc 3'
1368 - 1389 123.00 -21.82
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN25447513 18 COSMIC
COSN30193112 43 COSMIC
COSN19704321 82 COSMIC
COSN30102495 86 COSMIC
COSN30188854 86 COSMIC
COSN17078557 439 COSMIC
COSN9347783 774 COSMIC
COSN16591569 828 COSMIC
COSN29836599 999 COSMIC
COSN16794369 1206 COSMIC
COSN27884454 1331 COSMIC
COSN21783923 1593 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1427808999 1 dbSNP
rs766273648 5 dbSNP
rs369555841 14 dbSNP
rs759404455 21 dbSNP
rs767274525 23 dbSNP
rs373704099 25 dbSNP
rs767021245 32 dbSNP
rs755776586 33 dbSNP
rs149716981 34 dbSNP
rs753363282 39 dbSNP
rs1247173798 43 dbSNP
rs756890388 45 dbSNP
rs780697956 49 dbSNP
rs1235473841 51 dbSNP
rs930450768 53 dbSNP
rs985023307 54 dbSNP
rs930655173 60 dbSNP
rs534379407 67 dbSNP
rs984843037 68 dbSNP
rs1311722559 72 dbSNP
rs145590582 83 dbSNP
rs1215446425 86 dbSNP
rs940776565 96 dbSNP
rs1281574041 108 dbSNP
rs1443293578 131 dbSNP
rs1457330100 132 dbSNP
rs1335390079 137 dbSNP
rs1196993347 140 dbSNP
rs1306315922 146 dbSNP
rs1406815859 150 dbSNP
rs1056643243 152 dbSNP
rs375532288 160 dbSNP
rs1303714814 172 dbSNP
rs917854970 173 dbSNP
rs1411362794 183 dbSNP
rs1160081081 188 dbSNP
rs949998731 191 dbSNP
rs918114173 192 dbSNP
rs567884635 194 dbSNP
rs1234869169 197 dbSNP
rs1481068379 200 dbSNP
rs948295560 201 dbSNP
rs1045727135 220 dbSNP
rs1268913772 221 dbSNP
rs903490823 234 dbSNP
rs1450319026 239 dbSNP
rs1000475834 240 dbSNP
rs757144003 241 dbSNP
rs76214148 242 dbSNP
rs892214138 245 dbSNP
rs1007968923 246 dbSNP
rs1225531105 252 dbSNP
rs868494162 259 dbSNP
rs1464708085 267 dbSNP
rs1019411850 269 dbSNP
rs1282648963 273 dbSNP
rs1435754380 285 dbSNP
rs1328674724 286 dbSNP
rs1348035479 287 dbSNP
rs1355967847 303 dbSNP
rs556770234 307 dbSNP
rs1019126443 314 dbSNP
rs1387581778 322 dbSNP
rs966273839 332 dbSNP
rs1481178710 338 dbSNP
rs1302078876 340 dbSNP
rs964224997 341 dbSNP
rs1376640095 352 dbSNP
rs993568888 356 dbSNP
rs1477356993 367 dbSNP
rs1026014905 370 dbSNP
rs750343624 371 dbSNP
rs1464748738 385 dbSNP
rs1266565261 388 dbSNP
rs575437923 395 dbSNP
rs1324530871 397 dbSNP
rs1293763302 406 dbSNP
rs1317221371 408 dbSNP
rs1027327992 413 dbSNP
rs926380717 416 dbSNP
rs1271888237 418 dbSNP
rs1431323192 423 dbSNP
rs539765573 424 dbSNP
rs1275165029 425 dbSNP
rs959167043 430 dbSNP
rs1470787890 438 dbSNP
rs1406333258 439 dbSNP
rs1438634941 452 dbSNP
rs1412292957 456 dbSNP
rs566620624 459 dbSNP
rs952634591 462 dbSNP
rs992002903 469 dbSNP
rs984769667 478 dbSNP
rs1246646770 479 dbSNP
rs907913054 486 dbSNP
rs1185795945 488 dbSNP
rs1486820109 491 dbSNP
rs375762773 500 dbSNP
rs1208230652 502 dbSNP
rs755966022 503 dbSNP
rs917802513 522 dbSNP
rs945313509 531 dbSNP
rs1042101628 538 dbSNP
rs962112568 547 dbSNP
rs558629655 549 dbSNP
rs936063538 555 dbSNP
rs992252007 557 dbSNP
rs1301923185 574 dbSNP
rs1445286012 575 dbSNP
rs11667340 585 dbSNP
rs1170528448 591 dbSNP
rs948238627 592 dbSNP
rs1429735935 598 dbSNP
rs1388831923 612 dbSNP
rs1165908230 613 dbSNP
rs1007646939 622 dbSNP
rs879514793 624 dbSNP
rs748994046 632 dbSNP
rs1420978512 633 dbSNP
rs1045265846 635 dbSNP
rs754613114 637 dbSNP
rs1204503351 639 dbSNP
rs1341421723 640 dbSNP
rs1272435100 641 dbSNP
rs541506029 646 dbSNP
rs1322120222 650 dbSNP
rs757887133 660 dbSNP
rs371492235 661 dbSNP
rs778321790 665 dbSNP
rs553528327 671 dbSNP
rs1375054441 676 dbSNP
rs892142279 678 dbSNP
rs747628495 680 dbSNP
rs1041213007 681 dbSNP
rs899634095 684 dbSNP
rs575016064 689 dbSNP
rs772472499 691 dbSNP
rs1368115386 703 dbSNP
rs997069381 719 dbSNP
rs1006315278 720 dbSNP
rs1026841384 721 dbSNP
rs952602049 722 dbSNP
rs1368254745 727 dbSNP
rs1004165524 728 dbSNP
rs1014899217 730 dbSNP
rs142656100 730 dbSNP
rs962040091 737 dbSNP
rs201633686 739 dbSNP
rs199892108 740 dbSNP
rs368640791 740 dbSNP
rs527316486 741 dbSNP
rs1408950167 746 dbSNP
rs1340086668 747 dbSNP
rs1025467496 755 dbSNP
rs1482129022 762 dbSNP
rs555822590 770 dbSNP
rs917788005 773 dbSNP
rs991987949 773 dbSNP
rs779530261 774 dbSNP
rs1488765172 775 dbSNP
rs967013993 789 dbSNP
rs1219084557 791 dbSNP
rs1318394790 791 dbSNP
rs1284563863 793 dbSNP
rs1288622420 793 dbSNP
rs1387925327 793 dbSNP
rs1390625863 793 dbSNP
rs368046689 793 dbSNP
rs879295381 793 dbSNP
rs1292194979 794 dbSNP
rs1276851806 796 dbSNP
rs1455707171 804 dbSNP
rs969525344 806 dbSNP
rs575584195 809 dbSNP
rs1158726671 815 dbSNP
rs981345968 818 dbSNP
rs1471696132 822 dbSNP
rs542427921 823 dbSNP
rs1431628026 826 dbSNP
rs746011908 828 dbSNP
rs563913225 830 dbSNP
rs1350306069 832 dbSNP
rs925508674 835 dbSNP
rs936893315 837 dbSNP
rs773914931 844 dbSNP
rs1266548225 845 dbSNP
rs747515267 846 dbSNP
rs1486737065 857 dbSNP
rs531108413 862 dbSNP
rs537828144 871 dbSNP
rs1207714950 875 dbSNP
rs935987611 876 dbSNP
rs546485772 885 dbSNP
rs1040742691 886 dbSNP
rs1233307201 888 dbSNP
rs899561149 889 dbSNP
rs913189076 906 dbSNP
rs1329966287 907 dbSNP
rs910596120 915 dbSNP
rs1243362810 921 dbSNP
rs1366387753 923 dbSNP
rs1320303228 935 dbSNP
rs932456087 945 dbSNP
rs1455900713 950 dbSNP
rs777087355 951 dbSNP
rs1190120558 952 dbSNP
rs1465634702 954 dbSNP
rs1392946343 969 dbSNP
rs1375950794 970 dbSNP
rs1196680430 974 dbSNP
rs1430164829 977 dbSNP
rs1436158460 985 dbSNP
rs1174059714 987 dbSNP
rs759706737 996 dbSNP
rs1004093427 1002 dbSNP
rs1398892607 1006 dbSNP
rs1320128824 1008 dbSNP
rs1015537143 1014 dbSNP
rs897800037 1022 dbSNP
rs1435919192 1024 dbSNP
rs1253679777 1029 dbSNP
rs772264325 1031 dbSNP
rs1013987073 1033 dbSNP
rs1373518793 1033 dbSNP
rs563891619 1047 dbSNP
rs1385385570 1048 dbSNP
rs969871444 1067 dbSNP
rs929483933 1070 dbSNP
rs980888235 1072 dbSNP
rs1047949774 1075 dbSNP
rs1309017577 1079 dbSNP
rs1431608854 1087 dbSNP
rs45563835 1087 dbSNP
rs1005848338 1098 dbSNP
rs775442163 1102 dbSNP
rs1285661524 1113 dbSNP
rs958220227 1116 dbSNP
rs1033387108 1117 dbSNP
rs1244686449 1119 dbSNP
rs1187827053 1128 dbSNP
rs185193915 1131 dbSNP
rs1451528510 1134 dbSNP
rs914140555 1151 dbSNP
rs1250550493 1165 dbSNP
rs1197011508 1173 dbSNP
rs1483692309 1179 dbSNP
rs189664381 1186 dbSNP
rs1226771448 1188 dbSNP
rs528994105 1202 dbSNP
rs944323522 1208 dbSNP
rs1455322654 1214 dbSNP
rs976820512 1229 dbSNP
rs1024792536 1234 dbSNP
rs966544190 1236 dbSNP
rs1468468343 1238 dbSNP
rs920971915 1239 dbSNP
rs1410478960 1245 dbSNP
rs1369979168 1249 dbSNP
rs1307357951 1250 dbSNP
rs1385641327 1257 dbSNP
rs1427670155 1258 dbSNP
rs1032226791 1265 dbSNP
rs1163613268 1269 dbSNP
rs182665488 1277 dbSNP
rs1396727966 1285 dbSNP
rs958196675 1292 dbSNP
rs865828090 1300 dbSNP
rs888257664 1320 dbSNP
rs1472645032 1323 dbSNP
rs1308720066 1332 dbSNP
rs1334201913 1333 dbSNP
rs1241703230 1340 dbSNP
rs1280485125 1343 dbSNP
rs1356294003 1347 dbSNP
rs1209588681 1348 dbSNP
rs910582835 1351 dbSNP
rs939848746 1351 dbSNP
rs990105974 1351 dbSNP
rs1349956911 1358 dbSNP
rs1270738473 1370 dbSNP
rs943439608 1375 dbSNP
rs777828402 1376 dbSNP
rs1469362611 1377 dbSNP
rs747130401 1379 dbSNP
rs923364046 1380 dbSNP
rs1036890351 1384 dbSNP
rs1388250325 1388 dbSNP
rs895733043 1397 dbSNP
rs1213765795 1406 dbSNP
rs929459136 1409 dbSNP
rs1457381422 1416 dbSNP
rs2438578 1417 dbSNP
rs1025362737 1424 dbSNP
rs905197475 1425 dbSNP
rs764149649 1429 dbSNP
rs1364120116 1431 dbSNP
rs894834748 1436 dbSNP
rs762789761 1437 dbSNP
rs2438579 1438 dbSNP
rs1209674123 1440 dbSNP
rs547619948 1446 dbSNP
rs1328744838 1448 dbSNP
rs958146778 1465 dbSNP
rs1162634079 1467 dbSNP
rs570731277 1470 dbSNP
rs1368346836 1477 dbSNP
rs1275390365 1483 dbSNP
rs547429327 1484 dbSNP
rs1032628893 1498 dbSNP
rs1462096283 1500 dbSNP
rs957969550 1501 dbSNP
rs1394672010 1506 dbSNP
rs985368613 1515 dbSNP
rs1393316143 1517 dbSNP
rs1329991132 1518 dbSNP
rs1425195378 1522 dbSNP
rs1172513150 1536 dbSNP
rs1477325256 1547 dbSNP
rs553438721 1564 dbSNP
rs73002460 1569 dbSNP
rs964654351 1571 dbSNP
rs1212451234 1574 dbSNP
rs1413474575 1603 dbSNP
rs966004856 1604 dbSNP
rs1336087901 1607 dbSNP
rs1218641213 1610 dbSNP
rs372036695 1615 dbSNP
rs1342768675 1620 dbSNP
rs1299611804 1624 dbSNP
rs766187857 1631 dbSNP
rs542389295 1632 dbSNP
rs186514572 1634 dbSNP
rs1337075829 1637 dbSNP
rs953754829 1641 dbSNP
rs950905049 1648 dbSNP
rs983632020 1649 dbSNP
rs1392539689 1655 dbSNP
rs1413317550 1655 dbSNP
rs909397967 1655 dbSNP
rs1197130873 1656 dbSNP
rs942240554 1658 dbSNP
rs1441567537 1666 dbSNP
rs1185530431 1669 dbSNP
rs191584369 1676 dbSNP
rs1183819831 1677 dbSNP
rs1055359060 1684 dbSNP
rs1208084108 1688 dbSNP
rs909618666 1691 dbSNP
rs375132846 1692 dbSNP
rs1036858740 1695 dbSNP
rs753631479 1696 dbSNP
rs1475484108 1702 dbSNP
rs1170118456 1703 dbSNP
rs207477002 1707 dbSNP
rs916845532 1714 dbSNP
rs1371354107 1717 dbSNP
rs1295127107 1721 dbSNP
rs948998380 1724 dbSNP
rs1379421132 1739 dbSNP
rs949968873 1747 dbSNP
rs1044340188 1750 dbSNP
rs183489214 1751 dbSNP
rs1002200014 1752 dbSNP
rs1401760202 1755 dbSNP
rs528792866 1756 dbSNP
rs1369163740 1766 dbSNP
rs1167330266 1774 dbSNP
rs1053609052 1775 dbSNP
rs1413304748 1776 dbSNP
rs1180291034 1780 dbSNP
rs560526956 1785 dbSNP
rs1053737276 1786 dbSNP
rs1356705463 1789 dbSNP
rs1482681659 1812 dbSNP
rs1399888006 1813 dbSNP
rs893608188 1817 dbSNP
rs1223462732 1820 dbSNP
rs893887497 1824 dbSNP
rs1294260364 1825 dbSNP
rs1006691539 1830 dbSNP
rs1229164664 1833 dbSNP
rs1009639181 1838 dbSNP
rs1251598472 1844 dbSNP
rs188834022 1845 dbSNP
rs75777207 1849 dbSNP
rs998820109 1856 dbSNP
rs528907224 1861 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 7695.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uauucUCAGA-GGGGGACAUAUa 5'
               | |||  |: || | |: 
Target 5' uauuuAUUCUGGCUGCUCUUUG- 3'
2 - 23
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000343979.4 | 3UTR | UUAUUUAUUCUGGCUGCUCUUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
114 hsa-miR-1185-1-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT066415 TBK1 TANK binding kinase 1 2 4
MIRT073567 NR2F2 nuclear receptor subfamily 2 group F member 2 2 2
MIRT074516 USP1 ubiquitin specific peptidase 1 2 4
MIRT080576 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 6
MIRT086539 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 2
MIRT086547 MOB4 MOB family member 4, phocein 2 2
MIRT088684 EML4 echinoderm microtubule associated protein like 4 2 4
MIRT090811 MBNL1 muscleblind like splicing regulator 1 2 4
MIRT095500 PURA purine rich element binding protein A 2 2
MIRT109530 KLHL15 kelch like family member 15 2 6
MIRT109807 ZFX zinc finger protein, X-linked 2 2
MIRT117888 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT120273 GSK3B glycogen synthase kinase 3 beta 2 4
MIRT149892 LDLR low density lipoprotein receptor 2 2
MIRT178475 LCOR ligand dependent nuclear receptor corepressor 2 4
MIRT193445 RORA RAR related orphan receptor A 2 2
MIRT198527 DSG2 desmoglein 2 2 2
MIRT226427 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT227669 SET SET nuclear proto-oncogene 2 2
MIRT320405 HOXA9 homeobox A9 2 2
MIRT407774 MRPL35 mitochondrial ribosomal protein L35 2 2
MIRT439228 ZMIZ1 zinc finger MIZ-type containing 1 1 1
MIRT439312 VAT1L vesicle amine transport 1 like 1 1
MIRT439421 TMOD1 tropomodulin 1 1 1
MIRT439446 TMEM104 transmembrane protein 104 1 1
MIRT439524 STIM2 stromal interaction molecule 2 1 1
MIRT439612 SLC29A1 solute carrier family 29 member 1 (Augustine blood group) 1 1
MIRT439997 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 1 1
MIRT440017 PCSK1 proprotein convertase subtilisin/kexin type 1 1 1
MIRT440131 NCOA4 nuclear receptor coactivator 4 1 1
MIRT440311 LRRC1 leucine rich repeat containing 1 1 1
MIRT440475 IAPP islet amyloid polypeptide 1 1
MIRT440511 HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 1 1
MIRT440617 FOXA2 forkhead box A2 1 1
MIRT440666 FBXL16 F-box and leucine rich repeat protein 16 1 1
MIRT440705 ERO1LB endoplasmic reticulum oxidoreductase 1 beta 1 1
MIRT441007 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 1 1
MIRT441018 CAND1 cullin associated and neddylation dissociated 1 1 1
MIRT441062 C1orf43 chromosome 1 open reading frame 43 1 1
MIRT441209 ARCN1 archain 1 1 1
MIRT449461 HAT1 histone acetyltransferase 1 2 2
MIRT467104 SRI sorcin 2 2
MIRT468060 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 10
MIRT468476 SESN3 sestrin 3 2 4
MIRT473533 MAX MYC associated factor X 2 2
MIRT473852 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT474711 KIF13A kinesin family member 13A 2 6
MIRT481665 ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 2 2
MIRT485120 SF3B3 splicing factor 3b subunit 3 2 2
MIRT493055 MTFR1 mitochondrial fission regulator 1 2 2
MIRT504258 C1orf147 chromosome 1 open reading frame 147 2 4
MIRT504361 ARID1B AT-rich interaction domain 1B 2 4
MIRT505748 SENP1 SUMO1/sentrin specific peptidase 1 2 8
MIRT506298 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 2 6
MIRT508442 ZNF608 zinc finger protein 608 2 4
MIRT512782 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT520447 TSPAN2 tetraspanin 2 2 4
MIRT522133 NRBF2 nuclear receptor binding factor 2 2 6
MIRT522395 MYADM myeloid associated differentiation marker 2 4
MIRT523397 GRIK3 glutamate ionotropic receptor kainate type subunit 3 2 4
MIRT523938 E2F8 E2F transcription factor 8 2 4
MIRT524349 CREB1 cAMP responsive element binding protein 1 2 2
MIRT524711 BRMS1L breast cancer metastasis-suppressor 1 like 2 4
MIRT525134 ZNF256 zinc finger protein 256 2 2
MIRT525710 DCAF12L2 DDB1 and CUL4 associated factor 12 like 2 2 2
MIRT531264 PPIL3 peptidylprolyl isomerase like 3 2 2
MIRT538844 BTG1 BTG anti-proliferation factor 1 2 2
MIRT541366 CDKN1B cyclin dependent kinase inhibitor 1B 2 2
MIRT542093 KCNK10 potassium two pore domain channel subfamily K member 10 2 6
MIRT543770 RBM12B RNA binding motif protein 12B 2 4
MIRT543940 NCOA7 nuclear receptor coactivator 7 2 2
MIRT545150 GABRG1 gamma-aminobutyric acid type A receptor gamma1 subunit 2 2
MIRT545842 ZNF264 zinc finger protein 264 2 4
MIRT548057 GOLGA7 golgin A7 2 2
MIRT549242 ATXN1L ataxin 1 like 2 4
MIRT551829 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2 2
MIRT552484 ZNF136 zinc finger protein 136 2 2
MIRT553663 TGFBR2 transforming growth factor beta receptor 2 2 2
MIRT554988 RAB39B RAB39B, member RAS oncogene family 2 2
MIRT555760 PCTP phosphatidylcholine transfer protein 2 2
MIRT556923 IRF2BP2 interferon regulatory factor 2 binding protein 2 2 4
MIRT564991 WNK1 WNK lysine deficient protein kinase 1 2 2
MIRT566458 PGGT1B protein geranylgeranyltransferase type I subunit beta 2 2
MIRT566538 PANK3 pantothenate kinase 3 2 2
MIRT567732 DLX2 distal-less homeobox 2 2 2
MIRT570081 KANSL1L KAT8 regulatory NSL complex subunit 1 like 2 2
MIRT571735 RNF11 ring finger protein 11 2 2
MIRT573529 MDM2 MDM2 proto-oncogene 2 2
MIRT574459 RPS16 ribosomal protein S16 2 2
MIRT574992 Phka1 phosphorylase kinase alpha 1 2 3
MIRT576349 Pxdn peroxidasin 2 2
MIRT610196 CD99 CD99 molecule (Xg blood group) 2 4
MIRT612920 GPRIN3 GPRIN family member 3 2 2
MIRT615021 DUSP6 dual specificity phosphatase 6 2 2
MIRT623573 IRS1 insulin receptor substrate 1 2 2
MIRT624437 CASD1 CAS1 domain containing 1 2 2
MIRT628714 ZNF585A zinc finger protein 585A 2 2
MIRT639565 PCK1 phosphoenolpyruvate carboxykinase 1 2 4
MIRT641485 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT641657 PAPOLG poly(A) polymerase gamma 2 2
MIRT642210 RUVBL2 RuvB like AAA ATPase 2 2 2
MIRT653010 STX7 syntaxin 7 2 2
MIRT656130 MSH6 mutS homolog 6 2 2
MIRT656893 KIAA2018 upstream transcription factor family member 3 2 2
MIRT660130 BRPF3 bromodomain and PHD finger containing 3 2 2
MIRT660855 AFAP1 actin filament associated protein 1 2 2
MIRT676843 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 3
MIRT681473 DIP2A disco interacting protein 2 homolog A 2 2
MIRT682253 RS1 retinoschisin 1 2 2
MIRT694296 COPB2 coatomer protein complex subunit beta 2 2 2
MIRT694401 ALDH1A3 aldehyde dehydrogenase 1 family member A3 2 2
MIRT705277 BACH1 BTB domain and CNC homolog 1 2 2
MIRT720833 C1orf52 chromosome 1 open reading frame 52 2 2
MIRT735713 SIRT1 sirtuin 1 2 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-1185-1 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-1185-1 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-1185-1-3p Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-1185-1-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-1185-1-3p Temozolomide 5394 NSC362856 approved resistant cell line (U251)
hsa-miR-1185-1-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-1185-1-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-1185-1-3p Palbociclib 5330286 NSC758247 approved resistant cell line (T47D)
hsa-miR-1185-1-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-1185-1-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-1185-1-3p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-miR-1185-1-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (BAS)
hsa-miR-1185-1-3p Doxorubicin 31703 NSC123127 approved sensitive cell line (BAS)
hsa-miR-1185-1-3p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-1185-1-3p Tamoxifen+Fulvestrant resistant cell line (LCC9)
hsa-miR-1185-1-3p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-1185-1-3p Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-1185-1-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-1185-1-3p Gemcitabine 60750 NSC613327 approved resistant cell line (MDA-231)
hsa-miR-1185-1-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-1185-1-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-1185-1-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-1185-1-3p Cisplatin 5460033 NSC119875 approved resistant cell line (TOV-112D)

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