miRTarBase - #MIRT552615


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pre-miRNA Information
pre-miRNA hsa-mir-215   
Genomic Coordinates chr1: 220117853 - 220117962
Synonyms MIRN215, miRNA215, mir-215, MIR215
Description Homo sapiens miR-215 stem-loop
Comment This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-215-3p
Sequence 64| UCUGUCAUUUCUUUAGGCCAAUA |86
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs768393822 2 dbSNP
rs1345487830 5 dbSNP
rs757646667 7 dbSNP
rs754286532 11 dbSNP
rs749489380 17 dbSNP
rs1333471638 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZBTB8A   
Synonyms BOZF1, ZBTB8, ZNF916A
Description zinc finger and BTB domain containing 8A
Transcript NM_001040441   
Expression
Putative miRNA Targets on ZBTB8A
3'UTR of ZBTB8A
(miRNA target sites are highlighted)		 
>ZBTB8A|NM_001040441|3'UTR
   1 CTGTAATGTGAACCAACAGAGCTGGCATGTCTGCAATTTACATTGACTTCCTGTATCTCTCTCTTTCTATGGTCGGAGTC
  81 TAGTTAACAAATTTATCACACTGACTTTAAAGAAATGATCTGATATAACTTGCATGCTTTCTGAACAGGCCATTGTATCC
 161 ATTCTGAACTTTGTTGCCCTAAAATGTGTTGCTGCACTGGAAAGAAAGAACTAGCTTGAGTTGGCTTGATGGATGAACAA
 241 TTATCCTCTTACTTTCATTACAATCCTCTTACTTTATTCCAGAGATACCTTTTTCTTTTAATATTGGAGGATCTACTTAG
 321 CAAACTTTTTTCAAAGAAAATACTTTAAATAAATTCACCACAACCAAACTTTATGTAAGACAATTTCAAGGTGTTTCAAA
 401 AACACATAACTACCAATGTTTAATTTCACAGGGAACCAGTTAAGAGCACATTTAAGGATCTGGCAACCCACCTTACTAAA
 481 CAAATTAGTCTTTCTATTAATTTGAGATCTGAAACAACCTGTCATTACTCTGATATCCTGAACGTTTAAGGATTATGGAA
 561 GAAGACTAAAGTGTTTGAAATCATTCATATTTGAAATTTTTATCATTAGCTTAAAAATTACTCTCAGTATTGTTAAAAAA
 641 AAAAAAAAGTAGAGGCTGGCCAAAGATTATATACAGATATTTTCTTAAAGCAGGAAACTAATGTTGCCTAAAAGTCAAGG
 721 TAGTTTGTGAAGACAATCTGTCAATATGGTTGTCCATCTCTCTAAAGAAAAGCAGGCTGGGCGCTGTGGCTCATGCCTAT
 801 AATCCCAATACTTTGGGAGGCCGAGGCAGGCGGATCACAAGGTCAGGAGTTTGAAACCAGCCTGGCCAACATGGTGAAAC
 881 CTCGTCTCTACTAAAAAATACAAAATTAGCCGGGCATGGTGGCGGGTGCCTATAATCCCAGCTACTCGGGAGGCTGAGGC
 961 AGGAGAATCGATTGAACCTGGAAGGCAGAAGTTGCAGTGAGCCGAGATCACACCATTGCACTCCAGCCTGGGCAACAAGA
1041 GCGAAACTCCGTCTCAAAAAAAAAAGGAAAACAAACTAGGAGGTTCTTACCATATGTGAGTGATTTCTAACGTTTATGTA
1121 GTGCTATATTATTTATAAAGTACTCTCTCATGTATTTTCTCAGTGAGGTGGATACTATCTCCGATTTACAAATGAGGAAA
1201 TTAAGGTCAGAAAGTCTGAGAGAGAAAACTGATGATTGGACAGGATCTGATTTTAAACAATCCTCTTTCAGCCTTCTCTC
1281 CCTGTATGTCTCCTGAAATGGCAAAGAATAGAAGTCAAACCTCACCAGTTGGCAGTCATTATAAAAATAAGCCAATCAGA
1361 ATTAGAAAGTATGAAAGGAGGAATTGAATCATTTTCAACAACATACAATATCTTGATCTAGAGATTTTCAAATAATGCTA
1441 AGTAATGTCCCTACAGTACCTATTGGTATGTTTTTATGTCACGTTATTTATATGTAAATTTAAAGTATAAAACTATTTGA
1521 ACAAATTATTCACTTAAATATGTTGAACATTTTTGCTTCTCTTGTTTATATAATATTTTCAAAACAAACTTTTCTCCTAG
1601 TATACAAAGTTTAAACTTCTCCCCTTTGGGCTGGGCCCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGG
1681 CAGGTGGATCACCGAGGTCGGGAGTTTGAGACCAGCCTGACCAACATGGAGAAACCCCGTCTCTACTAAAAATACAAAAT
1761 TAGCCGGGCGTGGTGGTGCATGCCTGTAATCCCAGCTACTCAGAAGGCTGAGGCAGGAGGATAGCTTGAACCCAGGAGGC
1841 AGAGGCTGCGGTGGGCTGAGGTTGCGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAA
1921 AAAAAAAAACTTCTCCCCTGCATAAATTATGAAACATTCCAAAATTACAGCTAAATTAGAGAAGCATTGTTTCAGTTCTA
2001 AAGGTAAAATCTAAATATCCGAAGTAAAGAACTGAGCTTCATAAAGGTCTCTTCTGCAAGTTATCACAGTGAAGCTTGAT
2081 AGAATTTCACTGTATATGGAGAGGCTCCATCTATTTTACTGTTTTCTTTTTTGTTTTTGTTTTTTTTTCGAGACGGAGTC
2161 TCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAAGCTCCACCTCCCGGGTTCTCGCCATTCT
2241 CCTGCCTCAGCCTCCCGAGTAGCTGGGACTTACAGGCGCCCACCACCACTCCCAGCTAATTTTTTGTATTTTTAATAGAG
2321 ATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGATCTCGTGATCCGCCCCCCTCGGCCTCCCAAAGTGCTG
2401 GGATTACAGGCGTGAGCCACTGCGCCCAGCCAATTTTACTGTATTTTTAAATGCCATGACATACCTCAAAATTATCCTTT
2481 TTATGTTACTATTTTCTCTTGTTCTTTCATTAATTATTGTCCTTGATACCAATTTCTAGGCTAAATTGGTTACTTTCTTT
2561 TAAAAAATTTAAAAATAGATGAATAACCACTTGTTTCATGGTACTTAATTGAGACTTTTTCAAGATTCCCCTGATGGCAC
2641 ATTTGCAGTTGCTTCAAGACTGGATGATGTGCATTGAGTTCTCTGTTCTCCCAACATGGCTGTTCCTAAATCAGGATTCT
2721 GGTTTTTTTGAGATGGACTCTCGCTCTGTTGTCCAAGCTGGAGTGCAGTGGCGTGATCTCGCTCACCACAACCTCTGCCT
2801 CCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCCGGGACTACAGGCATGTGCCACCATGCCTGGCTAATTT
2881 TTGTATTTTTAGTAGAGACAGGGTTTCGCTATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCGTGATCTGCCCGCCTC
2961 AGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAGCACGCCCGGCCTAAATCAGGATTCTTAACAATTAAAGTGTATC
3041 TGAATGAGGAAGGAAACGCTTGTCATTCTCTAGTCTTACCCAATTAATACTGACACCTTTTGAAATTAAAACCTGATTTT
3121 TTAGTTGTTGGAGCCAGTAGGAAAAATGGCTGATTTGAACTTTTTTCCTATAAATGAAGTAGTGCTTGCATGTGTGTACT
3201 CTAATGCACTTTAGTCTATGATCTAAATGTCCTTTTATGCTATTATCTTCTGCATGCAAACTTTACATACATCAGCATGA
3281 ATATCCAACATTCACTGAACACAGTGCCACCAGCACTTGTAATTGCCTTTTCAGAAATAATGCTTTCTCATAATTGTTTA
3361 TAACGAGCATCAAACTATCCCCACAAAATGATCAAGTTCACCAAACTAGACAAAGAATCTGTTGTATCATTTTAACATCA
3441 TAGAAGAACATTTAAGACATGTTTGTAAGTTGTAAATAATGACTCCAGTTATAGCATATATATCTAAGACGTTAGAGACC
3521 AGTTATTTTCTAGAGTGAAACTGTCTATTGATGATTGAGAAAATTGAATTCTTTGGTTTTTACATGTGGGCAAATGTTAC
3601 ATAGGGGTATAATCTGTTTAAATAAGCTTTATTTATGCCAAGGATTTTTTTTTTAATATCAAGACTTGGTTAGACCAAAG
3681 TTTGCTCTTGCAGGAATGCCATTTATCAGCTTCTGAATGCCCTTCTAACTCCATTACCCTCAAGAGTGTCTGGGTATAGG
3761 ATGAAGCATTACAAAAAGAAAGCACCACTGCAGTCATGCCTAGTGTCTGGGAGAAACAAAATGGACTAGACCTGCAGTTT
3841 AAAATAATTTAACCCGAGAAACTCTTCAAATGAATTGTTTCCTAAAGATGCTCAAATTTAAGGGATAAACTCTAAAATCA
3921 GAGCTGCTGTGGTTAAAGTCCCCCACAAACCTTTCCCCAGACACCTCTGCAGAACTCAGGTGCACAATGTTGAAAACCAT
4001 GGAATTAGACAACTTCCTGAATTCCCTTTGAGCCTTGCAGCCTCATTTCGTTACTCCTGTTACTCACGGTGCTTATAAGC
4081 AGGTAACCATATGGTCTCTTAGTGAAGCAAATCACATCCTTAGCACATGATGTTCCTTCTATGGGTATCAGATCTTAAGA
4161 CTTTTTAAAATTTAGGAACAAATGTTTCAATATTATATTTTCAGTAATGCAATCAAAATAAGCATAGTTACTGTTTTCTG
4241 TACGGCTAAGTACTGCCTAATGGATGAAAGAAGTTTGGTGCTTCAATTATTTATGAGCTCAGAACTCAATTCATTAAAGT
4321 TATTTTGCCAAGTCATGCCAAGATATATTGAAATTTCCACTCATATTGGTTTTTAAAATTTTTTTTAGTCCTAAAATTAA
4401 TAAGTATGGAAAATCACTAAAAGCAGTGTAGGATAAGGTGTGTTTAACTGGCCGGGCACGGTGGCTCATGCCTGTAATCC
4481 TAGCACTTTGGGAGGCCGAGGCGGGCGGATCACTTAAGGCCAGGTGTTCGAGACCATCCTGGCCAACATGGTGAAACCCC
4561 GTCTCTAGTAAAAATACAAAAAATAGCTGGGCATGATGGTGGGTGCCTGTAATCCCAGGTACTCGGGAGGCTGAGGCAGG
4641 AGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAGTGGCCGAGATCGCACCACTGCACTCCAGCCTGGGTGACAGAGCGAG
4721 ACTCCATCAAAAAAAAAAAAAAAAAAAAAAAAGATGTGTTTAACTGGGAAGGGTGATAATAATAGAATAATAGGTACAGG
4801 AGGACCAAACTTTAGATTATAAACCAGAAAGTTTTGTTATTTTATATAAGTGTATCAGTATTACTATTTATCATTTATAT
4881 AGCATTTTATATTTGCAAAGTGTTTAATAATTTTTGTTATTCTTTACATATATATGAAATAGGACAGTTATCCCACATGA
4961 ACGGTAAATAAATTGAGGCACAGAACAGTAAAAAAACCTCAGGGTCAGGCGTGGTGGCTCACACCTGTAATCCCAGCACT
5041 TTGGGAGGCCAAGGCGGGTGGATCACTTTAGGTCAAGAGTTGGAGACCAGCCTGGGGCAATATAGTGAAACCCCTTCTCT
5121 ACTAAAAATACAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCTGGGGGCTGAGACAGGAGAATT
5201 GCTTGAACTCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCACGCTACTGCACTCCAGGCTGGGTGACAGAGCGAGACTCC
5281 ACCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAACCTAAGACAACCCAGTGAAATGGTAGCAAAAAATAGGAAATATAAT
5361 GATCACATTTTCTGAATCCTAGACCATCAGCCTAATTCACTGAGGTGTGTTGTGTATCACTCTATTTTATAGATGATTTT
5441 ATATAAGTAACAGTGGATTGTTTTAAAGCTGACGTCATTGTATGTGGATACATTCTATATGGAATAAATGTTATGTAAAG
5521 GATGTGACTTT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' auaacCGGAUUUCUUUACUGUCu 5'
               |||||| | :|||| || 
Target 5' gtactGCCTAATG-GATGAAAGa 3'
 4250 - 4271 133.00 -12.10
2 
miRNA  3' auaaccGGAUUUCUUUACUGUCu 5'
                || |: ||||||::|| 
Target 5' agacaaCCCAGTGAAATGGTAGc 3'
 5319 - 5341 133.00 -12.40
3 
miRNA  3' auaACCGGAUUUC---UUUACUGUCu 5'
             ||  ||  ||   :::|||||| 
Target 5' cacTGCACTCCAGCCTGGGTGACAGa 3'
 4690 - 4715 132.00 -15.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN1103094 7 COSMIC
COSN31548376 64 COSMIC
COSN1103096 80 COSMIC
COSN19735344 94 COSMIC
COSN30543913 152 COSMIC
COSN26586068 187 COSMIC
COSN32057543 280 COSMIC
COSN27215314 649 COSMIC
COSN15732823 746 COSMIC
COSN21519508 816 COSMIC
COSN31960212 1005 COSMIC
COSN25251770 1064 COSMIC
COSN25254922 1066 COSMIC
COSN20094646 1930 COSMIC
COSN8457090 2417 COSMIC
COSN29976934 2624 COSMIC
COSN26657715 3023 COSMIC
COSN31576217 3134 COSMIC
COSN30540893 3221 COSMIC
COSN31516874 3348 COSMIC
COSN28757919 3391 COSMIC
COSN6033982 3395 COSMIC
COSN24786642 3590 COSMIC
COSN4902186 4004 COSMIC
COSN6033983 4219 COSMIC
COSN23419388 4288 COSMIC
COSN31960213 4600 COSMIC
COSN16948150 4657 COSMIC
COSN1443495 5331 COSMIC
COSN1443497 5443 COSMIC
COSN8457091 5475 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs772798386 2 dbSNP
rs1311548192 5 dbSNP
rs1351111709 14 dbSNP
rs762488175 17 dbSNP
rs189151485 20 dbSNP
rs1269202672 22 dbSNP
rs755630083 25 dbSNP
rs572069010 26 dbSNP
rs751344865 27 dbSNP
rs371036633 28 dbSNP
rs1252701260 43 dbSNP
rs767308338 45 dbSNP
rs1180378211 51 dbSNP
rs752594891 53 dbSNP
rs1201224203 55 dbSNP
rs1281039881 56 dbSNP
rs1460253171 62 dbSNP
rs777194608 64 dbSNP
rs1430454192 66 dbSNP
rs138403158 70 dbSNP
rs948180540 73 dbSNP
rs979394729 75 dbSNP
rs925253368 76 dbSNP
rs1191695511 88 dbSNP
rs770631648 100 dbSNP
rs1181991103 101 dbSNP
rs1383139389 115 dbSNP
rs778410034 120 dbSNP
rs990465070 124 dbSNP
rs560785039 133 dbSNP
rs1052758529 151 dbSNP
rs1371980193 152 dbSNP
rs967796867 160 dbSNP
rs1316967817 162 dbSNP
rs746287387 165 dbSNP
rs377634378 168 dbSNP
rs531383570 173 dbSNP
rs891057889 186 dbSNP
rs1436758599 187 dbSNP
rs182402666 192 dbSNP
rs776089355 197 dbSNP
rs1382496697 201 dbSNP
rs761206915 211 dbSNP
rs956567369 219 dbSNP
rs986636745 231 dbSNP
rs1039580927 241 dbSNP
rs1268783883 243 dbSNP
rs187008509 244 dbSNP
rs1331381296 245 dbSNP
rs942626115 247 dbSNP
rs1441604789 248 dbSNP
rs532392103 248 dbSNP
rs921951336 264 dbSNP
rs930716706 270 dbSNP
rs2294815 280 dbSNP
rs1390601487 285 dbSNP
rs376036133 286 dbSNP
rs1158356272 295 dbSNP
rs1412052272 296 dbSNP
rs886607190 297 dbSNP
rs1458423598 304 dbSNP
rs34729090 326 dbSNP
rs1026741017 327 dbSNP
rs554597787 338 dbSNP
rs1357328448 342 dbSNP
rs1380405712 343 dbSNP
rs28361946 347 dbSNP
rs1396273251 361 dbSNP
rs1336514292 365 dbSNP
rs1334360068 371 dbSNP
rs1225583365 372 dbSNP
rs1003897670 376 dbSNP
rs896704779 385 dbSNP
rs1012929627 386 dbSNP
rs1262614433 387 dbSNP
rs534195976 392 dbSNP
rs1325896105 396 dbSNP
rs554358275 398 dbSNP
rs1435925072 404 dbSNP
rs1285412274 405 dbSNP
rs1321595996 430 dbSNP
rs992735186 432 dbSNP
rs190696413 439 dbSNP
rs969536697 445 dbSNP
rs765595354 447 dbSNP
rs979447064 450 dbSNP
rs925389128 452 dbSNP
rs1376608961 467 dbSNP
rs935300294 470 dbSNP
rs1466570697 475 dbSNP
rs1203869391 476 dbSNP
rs181512355 479 dbSNP
rs1309142725 482 dbSNP
rs1352815698 489 dbSNP
rs1403671199 492 dbSNP
rs1451663402 496 dbSNP
rs1200303480 497 dbSNP
rs988187055 498 dbSNP
rs371851960 509 dbSNP
rs1337169134 527 dbSNP
rs1204239812 529 dbSNP
rs1275122220 538 dbSNP
rs559155890 544 dbSNP
rs577615487 545 dbSNP
rs1433332099 546 dbSNP
rs1039548650 548 dbSNP
rs956453404 552 dbSNP
rs1451405588 553 dbSNP
rs1157922976 556 dbSNP
rs1169577049 568 dbSNP
rs1372801015 569 dbSNP
rs1423225452 570 dbSNP
rs704885 572 dbSNP
rs1391542812 576 dbSNP
rs1388638265 577 dbSNP
rs1388457961 581 dbSNP
rs931134140 597 dbSNP
rs1240098547 601 dbSNP
rs1048146152 603 dbSNP
rs886893022 606 dbSNP
rs1243673686 616 dbSNP
rs963975900 626 dbSNP
rs1488506964 630 dbSNP
rs1211053517 631 dbSNP
rs1392398866 635 dbSNP
rs1473385270 635 dbSNP
rs200940947 635 dbSNP
rs369401249 635 dbSNP
rs1443244075 636 dbSNP
rs1164654856 641 dbSNP
rs1369598728 645 dbSNP
rs1343750471 650 dbSNP
rs1004269470 656 dbSNP
rs921947712 678 dbSNP
rs930684115 693 dbSNP
rs1322876665 702 dbSNP
rs1049052707 720 dbSNP
rs1450241254 723 dbSNP
rs1056840174 737 dbSNP
rs545963459 738 dbSNP
rs553506412 748 dbSNP
rs1056610264 755 dbSNP
rs1258372348 757 dbSNP
rs896667943 772 dbSNP
rs1023845317 783 dbSNP
rs1249553714 784 dbSNP
rs1237413432 790 dbSNP
rs1012485228 792 dbSNP
rs756657445 792 dbSNP
rs1181590729 795 dbSNP
rs969505422 798 dbSNP
rs1426009367 809 dbSNP
rs759395403 815 dbSNP
rs1411316334 820 dbSNP
rs1457870992 821 dbSNP
rs571994937 823 dbSNP
rs1032375375 824 dbSNP
rs1447609437 829 dbSNP
rs767154814 832 dbSNP
rs186033017 833 dbSNP
rs1397699380 840 dbSNP
rs1253608563 843 dbSNP
rs912596855 848 dbSNP
rs965764973 850 dbSNP
rs1000501148 852 dbSNP
rs1180749132 856 dbSNP
rs975286063 858 dbSNP
rs143896510 866 dbSNP
rs562688164 872 dbSNP
rs1048283366 874 dbSNP
rs908289049 879 dbSNP
rs1175987291 880 dbSNP
rs956421112 882 dbSNP
rs1424171537 883 dbSNP
rs939821568 884 dbSNP
rs147251895 885 dbSNP
rs1184382438 895 dbSNP
rs1427290782 899 dbSNP
rs1019431192 902 dbSNP
rs1242200837 902 dbSNP
rs1467426431 903 dbSNP
rs895444271 904 dbSNP
rs1442228852 906 dbSNP
rs1369823402 909 dbSNP
rs1410390599 912 dbSNP
rs1012555321 913 dbSNP
rs1045261419 917 dbSNP
rs964256225 919 dbSNP
rs190408492 920 dbSNP
rs905481132 924 dbSNP
rs763398386 925 dbSNP
rs1306686504 933 dbSNP
rs1032549616 934 dbSNP
rs1274406064 936 dbSNP
rs1266847314 941 dbSNP
rs1341464779 941 dbSNP
rs564688670 948 dbSNP
rs1313604687 949 dbSNP
rs1427589224 954 dbSNP
rs1426987714 956 dbSNP
rs532324761 965 dbSNP
rs975354089 966 dbSNP
rs1369724815 968 dbSNP
rs182673262 970 dbSNP
rs559521683 971 dbSNP
rs965381512 975 dbSNP
rs1293624484 978 dbSNP
rs984726869 979 dbSNP
rs975442893 980 dbSNP
rs1479413985 987 dbSNP
rs1297246216 991 dbSNP
rs921165839 995 dbSNP
rs907898486 997 dbSNP
rs1288394077 999 dbSNP
rs187883667 1004 dbSNP
rs992678986 1005 dbSNP
rs1248562793 1010 dbSNP
rs1384596824 1012 dbSNP
rs1484977929 1013 dbSNP
rs764453693 1014 dbSNP
rs908337949 1015 dbSNP
rs1389309478 1016 dbSNP
rs1449924960 1042 dbSNP
rs1169230204 1043 dbSNP
rs1356386619 1044 dbSNP
rs190629428 1051 dbSNP
rs745464130 1052 dbSNP
rs1432427205 1056 dbSNP
rs904078960 1056 dbSNP
rs570174170 1061 dbSNP
rs936925557 1063 dbSNP
rs1052082688 1066 dbSNP
rs1282815889 1069 dbSNP
rs530981123 1071 dbSNP
rs1313535014 1074 dbSNP
rs1356217516 1085 dbSNP
rs1229398398 1087 dbSNP
rs892166193 1090 dbSNP
rs1382609404 1091 dbSNP
rs1208344700 1095 dbSNP
rs1229791111 1096 dbSNP
rs1465166484 1099 dbSNP
rs1195009094 1103 dbSNP
rs916998694 1106 dbSNP
rs948377211 1112 dbSNP
rs114525653 1113 dbSNP
rs1182430529 1114 dbSNP
rs1415325283 1119 dbSNP
rs546700061 1122 dbSNP
rs1455225064 1138 dbSNP
rs1157925635 1144 dbSNP
rs1388853202 1162 dbSNP
rs1458519792 1162 dbSNP
rs1332533663 1165 dbSNP
rs1340263150 1166 dbSNP
rs140745159 1169 dbSNP
rs1286537892 1171 dbSNP
rs747364043 1174 dbSNP
rs1348678775 1178 dbSNP
rs936957382 1183 dbSNP
rs1054452007 1184 dbSNP
rs1331402118 1209 dbSNP
rs1198957684 1211 dbSNP
rs1276223159 1212 dbSNP
rs1256296552 1215 dbSNP
rs1441697285 1216 dbSNP
rs1188128419 1218 dbSNP
rs1259588460 1229 dbSNP
rs576118733 1233 dbSNP
rs1201478300 1237 dbSNP
rs982685341 1242 dbSNP
rs1465261512 1246 dbSNP
rs1188229916 1252 dbSNP
rs553611006 1261 dbSNP
rs1170507718 1271 dbSNP
rs777244788 1272 dbSNP
rs748267714 1273 dbSNP
rs1378482044 1287 dbSNP
rs1471084006 1290 dbSNP
rs1336698283 1291 dbSNP
rs769710652 1293 dbSNP
rs996849754 1299 dbSNP
rs1288999903 1301 dbSNP
rs1028363937 1302 dbSNP
rs1231327108 1308 dbSNP
rs142266461 1310 dbSNP
rs1344000247 1317 dbSNP
rs983999814 1321 dbSNP
rs75096968 1324 dbSNP
rs1405845501 1326 dbSNP
rs925466331 1327 dbSNP
rs370372332 1328 dbSNP
rs1052723337 1330 dbSNP
rs778713298 1333 dbSNP
rs1439116573 1342 dbSNP
rs773494912 1367 dbSNP
rs1359254839 1370 dbSNP
rs1381222124 1380 dbSNP
rs536232655 1381 dbSNP
rs993099451 1390 dbSNP
rs1429655854 1406 dbSNP
rs1309235828 1408 dbSNP
rs1372450785 1409 dbSNP
rs763014158 1419 dbSNP
rs1380924965 1426 dbSNP
rs1331858519 1439 dbSNP
rs1235703832 1441 dbSNP
rs943662718 1449 dbSNP
rs948510473 1451 dbSNP
rs1040722501 1454 dbSNP
rs979729918 1455 dbSNP
rs771059228 1462 dbSNP
rs1275316849 1463 dbSNP
rs184118680 1466 dbSNP
rs935670411 1467 dbSNP
rs1266095925 1471 dbSNP
rs1484925928 1474 dbSNP
rs12567940 1483 dbSNP
rs892720824 1493 dbSNP
rs1246567631 1494 dbSNP
rs150916415 1495 dbSNP
rs1481517432 1499 dbSNP
rs1004076287 1506 dbSNP
rs1041650690 1516 dbSNP
rs1162667590 1523 dbSNP
rs901251642 1530 dbSNP
rs959994086 1537 dbSNP
rs775326376 1550 dbSNP
rs996901714 1556 dbSNP
rs558344780 1569 dbSNP
rs1298095359 1572 dbSNP
rs1309147594 1576 dbSNP
rs767695191 1587 dbSNP
rs368489337 1596 dbSNP
rs1467311018 1598 dbSNP
rs1356515436 1602 dbSNP
rs1215140975 1603 dbSNP
rs1161902963 1610 dbSNP
rs760445180 1620 dbSNP
rs188675615 1624 dbSNP
rs925435379 1625 dbSNP
rs35290235 1628 dbSNP
rs35613286 1628 dbSNP
rs1430648491 1630 dbSNP
rs1005979683 1640 dbSNP
rs1264302360 1649 dbSNP
rs753737548 1650 dbSNP
rs1346874097 1654 dbSNP
rs1187533439 1657 dbSNP
rs961614574 1666 dbSNP
rs988310426 1666 dbSNP
rs914121809 1668 dbSNP
rs1157194024 1670 dbSNP
rs1457998779 1673 dbSNP
rs1282286002 1676 dbSNP
rs1363879131 1683 dbSNP
rs1014086431 1684 dbSNP
rs1311970423 1693 dbSNP
rs530025403 1694 dbSNP
rs1234534739 1695 dbSNP
rs1265728386 1696 dbSNP
rs969871355 1700 dbSNP
rs1208979459 1710 dbSNP
rs1262851099 1714 dbSNP
rs540993313 1718 dbSNP
rs979780772 1721 dbSNP
rs1482519829 1725 dbSNP
rs1200356412 1727 dbSNP
rs1281897636 1732 dbSNP
rs1476488044 1735 dbSNP
rs1180059985 1738 dbSNP
rs139407329 1739 dbSNP
rs957004779 1742 dbSNP
rs1473010630 1745 dbSNP
rs1161635339 1748 dbSNP
rs988909408 1749 dbSNP
rs1464397533 1753 dbSNP
rs1302069235 1755 dbSNP
rs374191233 1764 dbSNP
rs1292524725 1765 dbSNP
rs945656194 1766 dbSNP
rs1285843754 1767 dbSNP
rs1223988724 1770 dbSNP
rs932377459 1770 dbSNP
rs1041309829 1771 dbSNP
rs1310786652 1773 dbSNP
rs1232931606 1776 dbSNP
rs1470644975 1779 dbSNP
rs1486903898 1789 dbSNP
rs1048164804 1790 dbSNP
rs1483444276 1795 dbSNP
rs922728817 1796 dbSNP
rs1179143755 1799 dbSNP
rs932825141 1800 dbSNP
rs1432850499 1803 dbSNP
rs1049813487 1805 dbSNP
rs1395471269 1812 dbSNP
rs1436489394 1814 dbSNP
rs1306177848 1816 dbSNP
rs888560476 1821 dbSNP
rs1442366620 1824 dbSNP
rs1400587503 1835 dbSNP
rs1164831271 1837 dbSNP
rs1005534142 1838 dbSNP
rs1003969889 1839 dbSNP
rs369799494 1842 dbSNP
rs1366859903 1846 dbSNP
rs766641296 1851 dbSNP
rs1302132911 1859 dbSNP
rs1354694659 1866 dbSNP
rs867857428 1867 dbSNP
rs1206664364 1870 dbSNP
rs897062252 1875 dbSNP
rs1245058050 1881 dbSNP
rs1014553817 1883 dbSNP
rs79398913 1888 dbSNP
rs1166618112 1893 dbSNP
rs1372368819 1897 dbSNP
rs371778670 1898 dbSNP
rs895701196 1898 dbSNP
rs1317159767 1905 dbSNP
rs367858630 1906 dbSNP
rs1433282975 1909 dbSNP
rs1214520583 1910 dbSNP
rs1275337063 1910 dbSNP
rs1321267275 1910 dbSNP
rs1331081152 1910 dbSNP
rs1363186222 1910 dbSNP
rs1220280187 1913 dbSNP
rs563647531 1915 dbSNP
rs1001334004 1917 dbSNP
rs1247190498 1917 dbSNP
rs1475669315 1922 dbSNP
rs1025383883 1923 dbSNP
rs1032708164 1924 dbSNP
rs1231511672 1925 dbSNP
rs531044218 1926 dbSNP
rs988489729 1927 dbSNP
rs1184746675 1928 dbSNP
rs1346219580 1929 dbSNP
rs1433499366 1929 dbSNP
rs1282985379 1930 dbSNP
rs1295235495 1930 dbSNP
rs1327261471 1930 dbSNP
rs1378503483 1930 dbSNP
rs1002288015 1931 dbSNP
rs912856953 1931 dbSNP
rs1447437800 1934 dbSNP
rs1217829525 1936 dbSNP
rs1235613223 1937 dbSNP
rs1474855902 1941 dbSNP
rs1187963551 1942 dbSNP
rs1032389034 1943 dbSNP
rs958116423 1953 dbSNP
rs1386091174 1955 dbSNP
rs1402858037 1956 dbSNP
rs965744865 1960 dbSNP
rs1332636681 1962 dbSNP
rs867067540 1964 dbSNP
rs988278330 1965 dbSNP
rs1415944214 1967 dbSNP
rs1314766983 1980 dbSNP
rs1348774995 1985 dbSNP
rs914091740 1988 dbSNP
rs1162300142 1989 dbSNP
rs976979656 1990 dbSNP
rs922863287 1994 dbSNP
rs77491194 1996 dbSNP
rs1280403911 2005 dbSNP
rs570986787 2006 dbSNP
rs1049946294 2009 dbSNP
rs1225215923 2012 dbSNP
rs977058800 2021 dbSNP
rs920918744 2022 dbSNP
rs1453181791 2027 dbSNP
rs1211579982 2029 dbSNP
rs909965431 2030 dbSNP
rs941476945 2031 dbSNP
rs1037126520 2053 dbSNP
rs1338476865 2058 dbSNP
rs1258999255 2065 dbSNP
rs1481809668 2069 dbSNP
rs897108234 2072 dbSNP
rs1014273423 2077 dbSNP
rs1363969588 2081 dbSNP
rs1470977289 2097 dbSNP
rs1171143163 2110 dbSNP
rs72709927 2114 dbSNP
rs1245191195 2118 dbSNP
rs905813773 2119 dbSNP
rs1435857682 2123 dbSNP
rs909609306 2124 dbSNP
rs577338326 2133 dbSNP
rs1176118739 2138 dbSNP
rs1409227763 2140 dbSNP
rs939794479 2140 dbSNP
rs1329633008 2144 dbSNP
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rs781631931 2990 dbSNP
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rs1211237706 5024 dbSNP
rs899031132 5025 dbSNP
rs1456823714 5037 dbSNP
rs943569204 5041 dbSNP
rs929212901 5055 dbSNP
rs1381493123 5056 dbSNP
rs975204952 5057 dbSNP
rs1170923452 5062 dbSNP
rs1047601701 5071 dbSNP
rs1415303351 5073 dbSNP
rs1329760062 5075 dbSNP
rs1176480228 5077 dbSNP
rs772340186 5081 dbSNP
rs146958660 5094 dbSNP
rs535638244 5104 dbSNP
rs1330522786 5105 dbSNP
rs1377596680 5111 dbSNP
rs1035714745 5112 dbSNP
rs1343815735 5122 dbSNP
rs1047762600 5123 dbSNP
rs886350452 5124 dbSNP
rs1316390605 5125 dbSNP
rs1198420016 5128 dbSNP
rs1239273216 5129 dbSNP
rs1440077270 5131 dbSNP
rs1237243257 5132 dbSNP
rs1196815168 5140 dbSNP
rs1284729908 5146 dbSNP
rs780217706 5151 dbSNP
rs1224318993 5158 dbSNP
rs569098604 5159 dbSNP
rs1421775933 5166 dbSNP
rs1463803700 5172 dbSNP
rs1450885089 5174 dbSNP
rs1400916092 5179 dbSNP
rs894956712 5185 dbSNP
rs1411631915 5191 dbSNP
rs1321010045 5192 dbSNP
rs1330064954 5192 dbSNP
rs1013036220 5195 dbSNP
rs1284737897 5204 dbSNP
rs1338001925 5207 dbSNP
rs1021796089 5209 dbSNP
rs1218347611 5214 dbSNP
rs555609344 5216 dbSNP
rs532978904 5218 dbSNP
rs551692567 5219 dbSNP
rs999592374 5223 dbSNP
rs1452192853 5225 dbSNP
rs968952394 5227 dbSNP
rs566663529 5230 dbSNP
rs955027796 5234 dbSNP
rs1031887220 5242 dbSNP
rs987699152 5243 dbSNP
rs769582882 5244 dbSNP
rs534045718 5247 dbSNP
rs1161336934 5251 dbSNP
rs1379786086 5255 dbSNP
rs1389934971 5257 dbSNP
rs965231278 5259 dbSNP
rs1304449213 5263 dbSNP
rs974960944 5272 dbSNP
rs1295578613 5273 dbSNP
rs1164899527 5286 dbSNP
rs1185187291 5286 dbSNP
rs1240973556 5286 dbSNP
rs1248889290 5286 dbSNP
rs1279226206 5286 dbSNP
rs1289026987 5286 dbSNP
rs1307162707 5286 dbSNP
rs1333979675 5286 dbSNP
rs1341562212 5286 dbSNP
rs1367775418 5286 dbSNP
rs1378016384 5286 dbSNP
rs1386689917 5286 dbSNP
rs1394609756 5286 dbSNP
rs1418701124 5286 dbSNP
rs1424682404 5286 dbSNP
rs1445212985 5286 dbSNP
rs555736414 5286 dbSNP
rs746163278 5286 dbSNP
rs1389011498 5288 dbSNP
rs1386508131 5302 dbSNP
rs1482414159 5309 dbSNP
rs201425030 5313 dbSNP
rs1379715079 5316 dbSNP
rs1445251357 5317 dbSNP
rs1307873559 5318 dbSNP
rs1359587358 5321 dbSNP
rs1246523221 5323 dbSNP
rs555356522 5326 dbSNP
rs987074406 5327 dbSNP
rs1185401710 5335 dbSNP
rs1236300856 5335 dbSNP
rs952196869 5338 dbSNP
rs140345098 5342 dbSNP
rs1365131664 5344 dbSNP
rs1239808528 5349 dbSNP
rs1172355630 5350 dbSNP
rs1407376751 5353 dbSNP
rs1454931557 5356 dbSNP
rs1456346919 5357 dbSNP
rs1376855154 5361 dbSNP
rs983507965 5367 dbSNP
rs1309310469 5380 dbSNP
rs12085991 5383 dbSNP
rs1310628615 5384 dbSNP
rs907839751 5393 dbSNP
rs939371183 5397 dbSNP
rs943109007 5407 dbSNP
rs1445377547 5408 dbSNP
rs1323917365 5423 dbSNP
rs1205333585 5424 dbSNP
rs773036288 5425 dbSNP
rs1457278471 5427 dbSNP
rs1167018264 5428 dbSNP
rs1252133589 5436 dbSNP
rs572499899 5444 dbSNP
rs916525515 5459 dbSNP
rs1366871841 5461 dbSNP
rs947879891 5471 dbSNP
rs1431083915 5473 dbSNP
rs762878123 5474 dbSNP
rs562041646 5475 dbSNP
rs537977811 5491 dbSNP
rs1400188747 5495 dbSNP
rs1052202186 5498 dbSNP
rs920343023 5507 dbSNP
rs1331343817 5509 dbSNP
rs890766918 5510 dbSNP
rs1007927339 5512 dbSNP
rs1019188432 5515 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 653121.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Cardiac Tissues
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM2202481. RNA binding protein: AGO2. Condition:S6_LV_61yo_Male_AGO2_bound_RNA HITS-CLIP data was present in GSM2202479. RNA binding protein: AGO2. Condition:S4_LV_29yo_Male_AGO2_bound_RNA ...

- Spengler RM; Zhang X; Cheng C; McLendon JM; et al., 2016, Nucleic acids research.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' auaacCGGAUUUCUUUACUGUCu 5'
               ||||    :::|||||| 
Target 5' cuccaGCCU----GGGUGACAGa 3'
 		1 - 19
Article - Spengler RM; Zhang X; Cheng C; McLendon JM; et al.
- Nucleic acids research, 2016
MicroRNAs (miRs) have emerged as key biological effectors in human health and disease. These small noncoding RNAs are incorporated into Argonaute (Ago) proteins, where they direct post-transcriptional gene silencing via base-pairing with target transcripts. Although miRs have become intriguing biological entities and attractive therapeutic targets, the translational impacts of miR research remain limited by a paucity of empirical miR targeting data, particularly in human primary tissues. Here, to improve our understanding of the diverse roles miRs play in cardiovascular function and disease, we applied high-throughput methods to globally profile miR:target interactions in human heart tissues. We deciphered Ago2:RNA interactions using crosslinking immunoprecipitation coupled with high-throughput sequencing (HITS-CLIP) to generate the first transcriptome-wide map of miR targeting events in human myocardium, detecting 4000 cardiac Ago2 binding sites across >2200 target transcripts. Our initial exploration of this interactome revealed an abundance of miR target sites in gene coding regions, including several sites pointing to new miR-29 functions in regulating cardiomyocyte calcium, growth and metabolism. Also, we uncovered several clinically-relevant interactions involving common genetic variants that alter miR targeting events in cardiomyopathy-associated genes. Overall, these data provide a critical resource for bolstering translational miR research in heart, and likely beyond.
LinkOut: [PMID: 27418678]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000316459.4 | 3UTR | ACAGAGCGAGACUCCACCUCAAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
96 hsa-miR-215-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058509 TEAD1 TEA domain transcription factor 1 2 2
MIRT445625 TMEM50A transmembrane protein 50A 2 2
MIRT449286 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT456702 LDB1 LIM domain binding 1 2 2
MIRT467723 SLC38A1 solute carrier family 38 member 1 2 2
MIRT474253 LATS2 large tumor suppressor kinase 2 2 2
MIRT481811 AP4E1 adaptor related protein complex 4 epsilon 1 subunit 2 2
MIRT491969 USP37 ubiquitin specific peptidase 37 2 2
MIRT513203 RFT1 RFT1 homolog 2 2
MIRT532737 CMTM6 CKLF like MARVEL transmembrane domain containing 6 2 2
MIRT535706 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 2
MIRT536138 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT536463 KLF12 Kruppel like factor 12 2 4
MIRT552615 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT554011 SPIRE1 spire type actin nucleation factor 1 2 2
MIRT563259 SLC29A1 solute carrier family 29 member 1 (Augustine blood group) 2 2
MIRT571054 POLQ DNA polymerase theta 2 4
MIRT573556 TMEM120B transmembrane protein 120B 2 2
MIRT573772 PRKAG1 protein kinase AMP-activated non-catalytic subunit gamma 1 2 2
MIRT575328 Fbxo6 F-box protein 6 2 2
MIRT575497 Sept3 septin 3 2 5
MIRT607051 IDS iduronate 2-sulfatase 2 2
MIRT607070 POM121L7 POM121 transmembrane nucleoporin like 7 pseudogene 2 2
MIRT607497 HEBP2 heme binding protein 2 2 2
MIRT607799 RHBDL2 rhomboid like 2 2 2
MIRT610832 COL9A1 collagen type IX alpha 1 chain 2 2
MIRT616853 DSG2 desmoglein 2 2 2
MIRT617154 C18orf42 A-kinase anchor inhibitor 1 2 2
MIRT620823 MKI67IP nucleolar protein interacting with the FHA domain of MKI67 1 1
MIRT625698 OPTN optineurin 2 2
MIRT628082 KAT7 lysine acetyltransferase 7 2 2
MIRT633540 PGBD5 piggyBac transposable element derived 5 2 2
MIRT634343 SGOL1 shugoshin 1 2 2
MIRT634605 KIAA1919 major facilitator superfamily domain containing 4B 2 2
MIRT636759 SLC16A5 solute carrier family 16 member 5 2 2
MIRT637044 SEPT3 septin 3 2 7
MIRT637213 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT639634 ZSCAN23 zinc finger and SCAN domain containing 23 2 2
MIRT640818 GPR107 G protein-coupled receptor 107 2 2
MIRT641033 PITPNB phosphatidylinositol transfer protein beta 2 2
MIRT641545 MOCOS molybdenum cofactor sulfurase 2 2
MIRT642091 FBXL2 F-box and leucine rich repeat protein 2 2 2
MIRT645528 ZWINT ZW10 interacting kinetochore protein 2 2
MIRT647017 ADCY2 adenylate cyclase 2 2 2
MIRT648044 FADS6 fatty acid desaturase 6 2 2
MIRT648514 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT648869 ABCA6 ATP binding cassette subfamily A member 6 2 2
MIRT656722 LMLN leishmanolysin like peptidase 2 2
MIRT658260 FAXC failed axon connections homolog 2 2
MIRT659063 DEPTOR DEP domain containing MTOR interacting protein 2 2
MIRT659364 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT660318 BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 2 2
MIRT663345 ZNF74 zinc finger protein 74 2 2
MIRT663526 MASTL microtubule associated serine/threonine kinase like 2 2
MIRT663975 ZNF786 zinc finger protein 786 2 2
MIRT664354 C16orf45 chromosome 16 open reading frame 45 2 2
MIRT664473 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT664975 TDRD1 tudor domain containing 1 2 2
MIRT665488 VPS53 VPS53, GARP complex subunit 2 2
MIRT667758 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 2 2
MIRT669552 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT670183 CCDC142 coiled-coil domain containing 142 2 2
MIRT671342 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT671873 ZNF429 zinc finger protein 429 2 2
MIRT672018 PXMP4 peroxisomal membrane protein 4 2 2
MIRT672068 KIAA0930 KIAA0930 2 2
MIRT672551 BRMS1L breast cancer metastasis-suppressor 1 like 2 2
MIRT672849 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT672988 KBTBD6 kelch repeat and BTB domain containing 6 2 2
MIRT673088 AK1 adenylate kinase 1 2 2
MIRT673578 KDELC2 KDEL motif containing 2 2 2
MIRT674582 SLC35B4 solute carrier family 35 member B4 2 2
MIRT674999 STRN3 striatin 3 2 2
MIRT675596 ZNF106 zinc finger protein 106 2 2
MIRT675778 YIPF4 Yip1 domain family member 4 2 2
MIRT676029 C9orf69 transmembrane protein 250 2 2
MIRT679015 MTMR10 myotubularin related protein 10 2 2
MIRT679169 PSMB2 proteasome subunit beta 2 2 2
MIRT687413 NRIP1 nuclear receptor interacting protein 1 2 2
MIRT688038 GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase 2 2
MIRT691644 SLC43A3 solute carrier family 43 member 3 2 2
MIRT695630 SLC26A2 solute carrier family 26 member 2 2 2
MIRT697562 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT699153 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT699683 SFMBT2 Scm like with four mbt domains 2 2 2
MIRT702177 LYRM4 LYR motif containing 4 2 2
MIRT706217 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT711243 TRAT1 T-cell receptor associated transmembrane adaptor 1 2 2
MIRT712343 NLN neurolysin 2 2
MIRT716574 HOPX HOP homeobox 2 2
MIRT717443 TENM1 teneurin transmembrane protein 1 2 2
MIRT717759 KCNRG potassium channel regulator 2 2
MIRT717945 TUBD1 tubulin delta 1 2 2
MIRT718343 PURA purine rich element binding protein A 2 2
MIRT718773 ABHD15 abhydrolase domain containing 15 2 2
MIRT737073 FOXM1 forkhead box M1 2 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-215 Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
miR-215 Trichostatin A (TSA) NULL 444732 Microarray apoptosis-resistant breast cancer cells 21971930 2011 up-regulated
miR-215 Arsenic trioxide approved 14888 Quantitative real-time PCR acute promyelocytic leukemia 22072212 2012 up-regulated
miR-215 Doxorubicin approved 31703 Quantitative real-time PCR heart 22859947 2012 up-regulated
miR-215 Furan NULL 8029 Quantitative real-time PCR liver 22079235 2011 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-215 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-215 Cisplatin 5460033 NSC119875 approved sensitive cell line (KYSE)
hsa-mir-215 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-215-3p Fluorouracil 3385 NSC19893 approved sensitive Low Colon Cancer cell line (HCT-116)
hsa-miR-215-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-215-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)

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