pre-miRNA Information
pre-miRNA hsa-mir-6818   
Genomic Coordinates chr22: 30007049 - 30007113
Description Homo sapiens miR-6818 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6818-5p
Sequence 6| UUGUGUGAGUACAGAGAGCAUC |27
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs763248242 2 dbSNP
rs186621048 3 dbSNP
rs1455267770 12 dbSNP
rs1170462641 19 dbSNP
rs1435853423 22 dbSNP
Putative Targets

Gene Information
Gene Symbol PPP3CB   
Synonyms CALNA2, CALNB, CNA2, PP2Bbeta
Description protein phosphatase 3 catalytic subunit beta
Transcript NM_001142353   
Other Transcripts NM_001142354 , NM_021132   
Expression
Putative miRNA Targets on PPP3CB
3'UTR of PPP3CB
(miRNA target sites are highlighted)
>PPP3CB|NM_001142353|3'UTR
   1 CCCACTACTTCCCAGGGACTCTCACATCTCGGGCCCCAAATGGACAGATCACCCGAGGAGCTGGAGGGGTCGGCCAAGCT
  81 GACTGTAAATTTCACAGTCTCTCTGAAGAAACCATTGTGCTTCTGAGACCCTAGCCCCCTTCCTGGATGGAGGCTTGAGG
 161 GCCCTGGGACATGTGCTATCTGATAAGATTGGGTCATCGCTGCCAAGGTGGAGAGCAGTGAGCAAGGGGCTTGGGGCAAT
 241 TTCCAGTGGAGGGCATCCACACCTCCATTTTATGCTTGTGGTTCACACATTTAAGTTTACAAATCAGATTTCTTTTCCCC
 321 TTCAGTAGAATTAGATTTTGTTTTTCAATCATGATTTCAAATGCAATCCTAAGAGCTAATGTGGACTTTTCTTTTTCCAT
 401 GAAATGTCTTTAAAGGATGAATTAGCATGGTCTTAAAATACATTTCTGAGGTTACTAGCTGTATTTTGAATTGTGAGCAA
 481 AATGCCGAGAAACCCAGTTGGCATTTATACAAAATGTTGACCTCAGGTCTATAGTTCTTAAATGTGGCTAATTCTGTAAC
 561 ATAGTCTTGGTATTTTTTAATTATGAATGCATATCCTATTTCCAGGCAGGCTCTCTTACTTGAACACAAATCCAAAAACT
 641 AATTTAGAGTCTTTTTTGCCCAGATCTTTTAAGACTTACACCCCAGAGATTTAAGAAGAAAACCTCTAAATTTCAAAATT
 721 ATGAAGAATTACAGAATTACTCATTTAAGGTACTTTAAAAGAAGTTTGTACATTGTCAAAGTAAATTTTAATTCAAATCA
 801 TGTCTGTAAAACTTGACGTATTTTGTGTATGCATGTTTTCATTTTGCAAATATTTAATATATAGACCTATGATGTACAGG
 881 TACGACATGTATAGGTTACCTAGATGTTATGAGAAATTTTAGTTTATTGTGAGTACTCAAGTTGCTTAGAGAGCCACCAG
 961 GGTGATTTGCTGCTGGCTTTCTATCATTTTTATGTTTTAATGCAAAGGAAATTTTAAAATGTTCTGGAAGTGTTTTTGAT
1041 TAAGCAATGCAGCCTAGAAGCAATGGTTCTGTTCAATCATTCAGATGTTAGTGGAAGCATAAAAGTCAAGACTGCATGTT
1121 GAAACCTTTCTTTTGATAGTTACTGAACTGCTTGGTTAAACTAAATGGAACCATGTGCTAATTTTTCACAATTATTGACC
1201 TGTATTGATTGCCACTGTAGTTTGGTATTTCCCTTTACTTTGGTGGCCTGCTTCCCTCATGCCCTGGAATACAACTCAGA
1281 GCTCCAGGCAGCGGAACCATCTATTGTTTTGTTTGCCAGAAAGTGCACCCTGTATGGTCTCCTGTCTAAGTTGGAAATAT
1361 TATGCATGTGCAGGACTATTCGAGTATTTTATAAACAGTAGCACACAATAAATTCCATGCATGGGCCGCTGCTCCTATCT
1441 CTGTGTTGGGTTTTATTTGGAAGATGCAATCTGATTTGTCCTTTTGATGCAAATCAGAAAATCCTGTTACTAGAGCTGGG
1521 ATGTCCTCCGGAGATTATCTCGTGGATAGTTCATGGTAATTTGATTAATTAAATTCTTTATAAATTTTGCCTTAAAAAAA
1601 ACTTTTGTTATATACTTGTTTTACATGAGCATTAGTAACTGAGCACTAGAGGACTTTGAATGCCTACTGTAGGCCTCCTA
1681 AGTCTAATATTTAAGATCACTGTTTATTGTCTTTTAATTGAAAGAAAATATGTTATTGTCTAGAATTTTGTTATAGTGGT
1761 ATTGGGAATTTACTGGGTGTTCTAACAATAAGAAAAATATTAGTGATAATTGCAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cuACGAGAGACAUGAGUGUGUu 5'
            |||| | || ::||||||| 
Target 5' taTGCT-TGTG-GTTCACACAt 3'
271 - 290 158.00 -15.60
2
miRNA  3' cuaCGAGAGACAUGAG--UGUGUu 5'
             ||||||| ||||:  ||||| 
Target 5' cagGCTCTCT-TACTTGAACACAa 3'
607 - 629 126.00 -19.60
3
miRNA  3' cuaCGAGAGACAU---GAGUGUguu 5'
             |||  |||||   :|||||   
Target 5' caaGCTGACTGTAAATTTCACAgtc 3'
75 - 99 123.00 -13.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26603909 4 COSMIC
COSN30151408 13 COSMIC
COSN26990198 31 COSMIC
COSN30118473 54 COSMIC
COSN31590994 117 COSMIC
COSN30129301 140 COSMIC
COSN31578941 147 COSMIC
COSN28198164 173 COSMIC
COSN31603169 199 COSMIC
COSN19319540 245 COSMIC
COSN31580020 265 COSMIC
COSN31607457 358 COSMIC
COSN26712339 373 COSMIC
COSN24303432 662 COSMIC
COSN10072477 742 COSMIC
COSN1500285 798 COSMIC
COSN31609292 913 COSMIC
COSN17963425 938 COSMIC
COSN28819582 949 COSMIC
COSN1122365 1115 COSMIC
COSN31538855 1142 COSMIC
COSN30355908 1151 COSMIC
COSN31573124 1171 COSMIC
COSN21353522 1412 COSMIC
COSN1500283 1432 COSMIC
COSN29382310 1580 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs778009184 1 dbSNP
rs142809630 2 dbSNP
rs751608335 4 dbSNP
rs1285746446 5 dbSNP
rs370087202 7 dbSNP
rs1165479829 12 dbSNP
rs758167874 15 dbSNP
rs750263168 16 dbSNP
rs199731655 17 dbSNP
rs756907370 23 dbSNP
rs200914721 26 dbSNP
rs371806368 27 dbSNP
rs1391814565 28 dbSNP
rs34869528 28 dbSNP
rs752666913 31 dbSNP
rs765283946 32 dbSNP
rs368078431 33 dbSNP
rs759767509 34 dbSNP
rs1238154923 36 dbSNP
rs1196739270 37 dbSNP
rs1177300721 40 dbSNP
rs774795240 42 dbSNP
rs908010559 54 dbSNP
rs1282939473 55 dbSNP
rs1252749013 57 dbSNP
rs1405770168 58 dbSNP
rs1196815540 66 dbSNP
rs1347543448 71 dbSNP
rs966923618 72 dbSNP
rs930857032 78 dbSNP
rs41306522 81 dbSNP
rs1185663717 83 dbSNP
rs980407213 84 dbSNP
rs1008362477 93 dbSNP
rs954204305 104 dbSNP
rs1470890806 105 dbSNP
rs1028526741 113 dbSNP
rs1381368640 115 dbSNP
rs1169535287 119 dbSNP
rs575942606 128 dbSNP
rs1449912693 134 dbSNP
rs995664597 135 dbSNP
rs1326587128 137 dbSNP
rs190365928 144 dbSNP
rs1226259114 147 dbSNP
rs1251061071 157 dbSNP
rs1316480987 174 dbSNP
rs3750574 196 dbSNP
rs753342135 198 dbSNP
rs955822477 199 dbSNP
rs1198734472 201 dbSNP
rs1263960791 203 dbSNP
rs867494925 215 dbSNP
rs1192784759 225 dbSNP
rs577665570 239 dbSNP
rs948521718 255 dbSNP
rs1481321345 295 dbSNP
rs915721878 308 dbSNP
rs1249078236 318 dbSNP
rs1468175494 322 dbSNP
rs1329154300 323 dbSNP
rs1290059562 324 dbSNP
rs1385082624 328 dbSNP
rs1381266580 348 dbSNP
rs1031444320 360 dbSNP
rs1338875499 361 dbSNP
rs1225798645 362 dbSNP
rs1284330156 364 dbSNP
rs999967944 366 dbSNP
rs1231733503 376 dbSNP
rs1251923736 385 dbSNP
rs1054335308 387 dbSNP
rs1262526537 390 dbSNP
rs1198050577 391 dbSNP
rs777436934 401 dbSNP
rs553070177 404 dbSNP
rs936738210 426 dbSNP
rs1261370143 429 dbSNP
rs996816226 440 dbSNP
rs1199799103 443 dbSNP
rs1428358103 451 dbSNP
rs925405302 455 dbSNP
rs142895453 461 dbSNP
rs201401629 461 dbSNP
rs1161244805 480 dbSNP
rs978064531 484 dbSNP
rs755719312 486 dbSNP
rs534664730 487 dbSNP
rs1363843192 489 dbSNP
rs1452490450 493 dbSNP
rs900464638 498 dbSNP
rs1366979045 509 dbSNP
rs987044791 510 dbSNP
rs1405194661 523 dbSNP
rs765838825 527 dbSNP
rs543958583 532 dbSNP
rs1345309783 544 dbSNP
rs1009366639 554 dbSNP
rs995716244 571 dbSNP
rs1238501344 572 dbSNP
rs1325947149 577 dbSNP
rs1047864184 578 dbSNP
rs1361790819 579 dbSNP
rs1223532186 584 dbSNP
rs930783401 598 dbSNP
rs1441601524 601 dbSNP
rs899365552 610 dbSNP
rs1178858599 613 dbSNP
rs1045040354 615 dbSNP
rs753532541 618 dbSNP
rs1330865460 625 dbSNP
rs1394200744 635 dbSNP
rs1417997075 641 dbSNP
rs949000283 645 dbSNP
rs916865753 646 dbSNP
rs1405167897 647 dbSNP
rs992525762 648 dbSNP
rs185029461 649 dbSNP
rs1470799304 650 dbSNP
rs1015359895 652 dbSNP
rs934352031 659 dbSNP
rs1446720625 666 dbSNP
rs1307118101 667 dbSNP
rs1385128345 673 dbSNP
rs1246949037 674 dbSNP
rs1003794684 679 dbSNP
rs1291380956 680 dbSNP
rs370952936 680 dbSNP
rs978515148 684 dbSNP
rs1251685794 690 dbSNP
rs968523028 692 dbSNP
rs1157920058 695 dbSNP
rs1045407719 712 dbSNP
rs1028117359 731 dbSNP
rs536153174 734 dbSNP
rs965337990 740 dbSNP
rs767858767 750 dbSNP
rs1365016278 752 dbSNP
rs1172919820 763 dbSNP
rs569142270 772 dbSNP
rs531802413 785 dbSNP
rs1184689679 788 dbSNP
rs894420557 796 dbSNP
rs1441201188 797 dbSNP
rs1465529244 799 dbSNP
rs1008879816 815 dbSNP
rs1243016194 815 dbSNP
rs550455505 817 dbSNP
rs532370134 818 dbSNP
rs1266511354 820 dbSNP
rs1054666791 833 dbSNP
rs1223408198 839 dbSNP
rs60489647 841 dbSNP
rs1216572297 852 dbSNP
rs1351565972 860 dbSNP
rs1026391337 869 dbSNP
rs1196650209 874 dbSNP
rs762234458 876 dbSNP
rs994961606 876 dbSNP
rs899292172 883 dbSNP
rs191765226 884 dbSNP
rs948955661 886 dbSNP
rs1057512165 889 dbSNP
rs1420635053 889 dbSNP
rs1409029778 906 dbSNP
rs934319765 907 dbSNP
rs924321724 910 dbSNP
rs1357531162 913 dbSNP
rs1317275026 926 dbSNP
rs1433116524 926 dbSNP
rs1400928301 927 dbSNP
rs1386598733 929 dbSNP
rs1339578566 931 dbSNP
rs1160967062 935 dbSNP
rs1284959893 936 dbSNP
rs978444629 940 dbSNP
rs12644 949 dbSNP
rs1385195478 957 dbSNP
rs1184714650 967 dbSNP
rs1216041598 973 dbSNP
rs1042502132 978 dbSNP
rs1241219309 984 dbSNP
rs1488165485 992 dbSNP
rs921069831 998 dbSNP
rs1191871819 1000 dbSNP
rs975288930 1019 dbSNP
rs965609559 1021 dbSNP
rs868046426 1036 dbSNP
rs528224452 1047 dbSNP
rs1447802324 1049 dbSNP
rs1019512996 1056 dbSNP
rs188358334 1059 dbSNP
rs1304674791 1060 dbSNP
rs1345949762 1064 dbSNP
rs1358767859 1068 dbSNP
rs1435639877 1073 dbSNP
rs558976927 1076 dbSNP
rs775596679 1082 dbSNP
rs1223921303 1086 dbSNP
rs932886367 1092 dbSNP
rs994887342 1097 dbSNP
rs899260849 1099 dbSNP
rs534056456 1102 dbSNP
rs1269385943 1155 dbSNP
rs921543753 1165 dbSNP
rs974626033 1166 dbSNP
rs896006643 1170 dbSNP
rs1057377050 1171 dbSNP
rs999067621 1172 dbSNP
rs1471442303 1176 dbSNP
rs902824717 1177 dbSNP
rs1379785876 1180 dbSNP
rs566837153 1191 dbSNP
rs1423492738 1192 dbSNP
rs947116671 1197 dbSNP
rs1321503117 1199 dbSNP
rs1164837272 1225 dbSNP
rs1442856883 1230 dbSNP
rs1427103781 1232 dbSNP
rs1374066769 1233 dbSNP
rs962915099 1239 dbSNP
rs1312946230 1245 dbSNP
rs769994412 1247 dbSNP
rs1209544588 1254 dbSNP
rs1288179443 1259 dbSNP
rs1440009235 1260 dbSNP
rs982489151 1261 dbSNP
rs1417908166 1269 dbSNP
rs971160956 1272 dbSNP
rs1437964021 1274 dbSNP
rs943875591 1283 dbSNP
rs1023907376 1288 dbSNP
rs1472594622 1289 dbSNP
rs1012548863 1290 dbSNP
rs542650368 1293 dbSNP
rs770277408 1300 dbSNP
rs1196998427 1303 dbSNP
rs1397483489 1320 dbSNP
rs1454178590 1334 dbSNP
rs1315140557 1339 dbSNP
rs755024490 1350 dbSNP
rs143737425 1360 dbSNP
rs1242183716 1363 dbSNP
rs1282744425 1364 dbSNP
rs148852288 1381 dbSNP
rs1224728991 1384 dbSNP
rs1339992767 1393 dbSNP
rs564008262 1402 dbSNP
rs1456500733 1416 dbSNP
rs1205568738 1419 dbSNP
rs1256969744 1427 dbSNP
rs1423416195 1428 dbSNP
rs751510826 1431 dbSNP
rs1185730446 1433 dbSNP
rs1272147468 1434 dbSNP
rs766094259 1434 dbSNP
rs1374559498 1444 dbSNP
rs1214980771 1447 dbSNP
rs982656735 1465 dbSNP
rs1032930046 1469 dbSNP
rs1272765252 1474 dbSNP
rs1000400684 1477 dbSNP
rs919229608 1484 dbSNP
rs903006687 1492 dbSNP
rs1304433883 1497 dbSNP
rs1393896769 1506 dbSNP
rs1319938748 1510 dbSNP
rs963738624 1521 dbSNP
rs746028574 1523 dbSNP
rs138763068 1529 dbSNP
rs781621148 1530 dbSNP
rs945423053 1537 dbSNP
rs1225914705 1541 dbSNP
rs1410918052 1542 dbSNP
rs891246779 1550 dbSNP
rs1198931026 1551 dbSNP
rs577829990 1553 dbSNP
rs1192591132 1554 dbSNP
rs932688740 1559 dbSNP
rs553184463 1570 dbSNP
rs1174635690 1573 dbSNP
rs1480236752 1576 dbSNP
rs1269802278 1586 dbSNP
rs1035830273 1589 dbSNP
rs1201715550 1594 dbSNP
rs541103892 1601 dbSNP
rs1232276397 1602 dbSNP
rs781708948 1602 dbSNP
rs903465541 1602 dbSNP
rs1205105206 1605 dbSNP
rs1385148781 1606 dbSNP
rs1399027251 1607 dbSNP
rs1297921188 1610 dbSNP
rs1338946064 1612 dbSNP
rs1376322684 1615 dbSNP
rs1407265435 1616 dbSNP
rs1043311620 1622 dbSNP
rs1011182899 1646 dbSNP
rs974361218 1662 dbSNP
rs554700321 1664 dbSNP
rs1276234636 1675 dbSNP
rs1222600404 1678 dbSNP
rs113779478 1682 dbSNP
rs1284749948 1685 dbSNP
rs943788291 1686 dbSNP
rs1216198706 1695 dbSNP
rs183647183 1705 dbSNP
rs537457428 1708 dbSNP
rs1024026723 1709 dbSNP
rs1431377087 1712 dbSNP
rs991522741 1715 dbSNP
rs564404255 1723 dbSNP
rs958405866 1725 dbSNP
rs1156504156 1731 dbSNP
rs191440423 1732 dbSNP
rs991557534 1736 dbSNP
rs144554170 1738 dbSNP
rs1033123447 1742 dbSNP
rs1035799022 1743 dbSNP
rs753723728 1754 dbSNP
rs967547056 1760 dbSNP
rs1377792366 1772 dbSNP
rs1239663797 1774 dbSNP
rs903119939 1780 dbSNP
rs1284218496 1783 dbSNP
rs1021823417 1790 dbSNP
rs1221950411 1795 dbSNP
rs111877372 1797 dbSNP
rs76347821 1798 dbSNP
rs1197516273 1799 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 5532.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' cuacgagagacauGAGUGUGUu 5'
                       :||||||| 
Target 5' -------------UUCACACAu 3'
1 - 9
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000360663.5 | 3UTR | UUCACACAUUUAAGUUUACAAAUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
140 hsa-miR-6818-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT071796 RNF11 ring finger protein 11 2 2
MIRT077120 NKIRAS2 NFKB inhibitor interacting Ras like 2 2 4
MIRT079951 RNF138 ring finger protein 138 2 2
MIRT102968 EN2 engrailed homeobox 2 2 4
MIRT115694 MGRN1 mahogunin ring finger 1 2 2
MIRT121074 FGFRL1 fibroblast growth factor receptor like 1 2 2
MIRT143171 GLYR1 glyoxylate reductase 1 homolog 2 2
MIRT145635 LASP1 LIM and SH3 protein 1 2 2
MIRT282026 ARID3B AT-rich interaction domain 3B 2 6
MIRT301684 EP300 E1A binding protein p300 2 2
MIRT328627 AKIRIN1 akirin 1 2 2
MIRT340977 IPO5 importin 5 2 2
MIRT371401 STC2 stanniocalcin 2 2 2
MIRT378008 TMED7 transmembrane p24 trafficking protein 7 2 4
MIRT445185 CCDC88C coiled-coil domain containing 88C 2 2
MIRT447120 DUSP16 dual specificity phosphatase 16 2 2
MIRT449153 SORCS2 sortilin related VPS10 domain containing receptor 2 2 2
MIRT450200 ABHD15 abhydrolase domain containing 15 2 2
MIRT453853 ZNF12 zinc finger protein 12 2 2
MIRT459077 LSM1 LSM1 homolog, mRNA degradation associated 2 2
MIRT461304 MRPS27 mitochondrial ribosomal protein S27 2 2
MIRT464137 VPS28 VPS28, ESCRT-I subunit 2 2
MIRT468114 SH3PXD2A SH3 and PX domains 2A 2 2
MIRT471401 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT478220 DDX52 DExD-box helicase 52 2 2
MIRT479695 CCNT1 cyclin T1 2 2
MIRT479779 CCND1 cyclin D1 2 2
MIRT484980 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 8
MIRT485016 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 8
MIRT485034 TMEM189 transmembrane protein 189 2 8
MIRT485221 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT490143 TERF2IP TERF2 interacting protein 2 6
MIRT508908 DOK6 docking protein 6 2 6
MIRT513877 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 4
MIRT515966 C9orf156 tRNA methyltransferase O 2 4
MIRT517892 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT518660 CLVS2 clavesin 2 2 4
MIRT520027 YOD1 YOD1 deubiquitinase 2 6
MIRT523884 EPHA5 EPH receptor A5 2 4
MIRT529237 PORCN porcupine O-acyltransferase 2 2
MIRT535337 PFN1 profilin 1 2 2
MIRT537532 EZR ezrin 2 2
MIRT537695 ELOVL6 ELOVL fatty acid elongase 6 2 2
MIRT538494 CLOCK clock circadian regulator 2 2
MIRT539140 ARHGAP35 Rho GTPase activating protein 35 2 2
MIRT541380 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT545018 PLP1 proteolipid protein 1 2 2
MIRT547732 KIF23 kinesin family member 23 2 4
MIRT548257 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT550372 MYLK3 myosin light chain kinase 3 2 2
MIRT551867 TMEM47 transmembrane protein 47 2 2
MIRT552289 SNAP29 synaptosome associated protein 29 2 2
MIRT552902 VSNL1 visinin like 1 2 8
MIRT552990 VAMP4 vesicle associated membrane protein 4 2 4
MIRT554729 RHOC ras homolog family member C 2 2
MIRT555301 PPP3CB protein phosphatase 3 catalytic subunit beta 2 2
MIRT556832 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT557523 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT558238 EDA2R ectodysplasin A2 receptor 2 2
MIRT558920 CBX1 chromobox 1 2 2
MIRT559198 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT559611 AMER1 APC membrane recruitment protein 1 2 2
MIRT559769 URGCP-MRPS24 URGCP-MRPS24 readthrough 2 4
MIRT564648 ZNF487P zinc finger protein 487 1 1
MIRT565856 NHS NHS actin remodeling regulator 2 2
MIRT569044 ZNF655 zinc finger protein 655 2 2
MIRT569154 SIGMAR1 sigma non-opioid intracellular receptor 1 2 2
MIRT569166 DMD dystrophin 2 2
MIRT569205 CASZ1 castor zinc finger 1 2 2
MIRT569264 BRWD3 bromodomain and WD repeat domain containing 3 2 2
MIRT569431 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT569476 CTSE cathepsin E 2 2
MIRT570232 NCAN neurocan 2 2
MIRT570519 SHH sonic hedgehog 2 2
MIRT570680 FZD5 frizzled class receptor 5 2 2
MIRT572161 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT575142 Cd93 CD93 antigen 2 3
MIRT575644 Mitf microphthalmia-associated transcription factor 2 3
MIRT575653 Synpo synaptopodin 2 4
MIRT576375 Runx1t1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 2 2
MIRT576388 Fhl2 four and a half LIM domains 2 2 3
MIRT576413 Pla2g16 phospholipase A2, group XVI 2 2
MIRT576697 Hps3 HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 2 3
MIRT606872 CHST11 carbohydrate sulfotransferase 11 2 4
MIRT606940 GFRA1 GDNF family receptor alpha 1 2 6
MIRT607025 ZEB1 zinc finger E-box binding homeobox 1 2 2
MIRT607028 PPY pancreatic polypeptide 2 4
MIRT607081 MITF melanogenesis associated transcription factor 2 3
MIRT607769 HS6ST3 heparan sulfate 6-O-sulfotransferase 3 2 6
MIRT607881 SATB1 SATB homeobox 1 2 2
MIRT607996 BTBD9 BTB domain containing 9 2 2
MIRT608124 TSC22D2 TSC22 domain family member 2 2 2
MIRT608132 TGFBR2 transforming growth factor beta receptor 2 2 2
MIRT608209 ADAT2 adenosine deaminase, tRNA specific 2 2 2
MIRT608337 SPN sialophorin 2 2
MIRT608416 SYNPO synaptopodin 2 5
MIRT608459 CD93 CD93 molecule 2 3
MIRT608555 SBK1 SH3 domain binding kinase 1 2 6
MIRT608585 PPP2R1B protein phosphatase 2 scaffold subunit Abeta 2 4
MIRT608785 JAKMIP2 janus kinase and microtubule interacting protein 2 2 4
MIRT608791 CDH12 cadherin 12 2 2
MIRT608816 ONECUT3 one cut homeobox 3 2 6
MIRT608876 CNTF ciliary neurotrophic factor 2 6
MIRT608881 CLIC6 chloride intracellular channel 6 2 2
MIRT608894 ZNF860 zinc finger protein 860 2 2
MIRT608954 GIMAP1 GTPase, IMAP family member 1 2 4
MIRT609007 HPS3 HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 2 3
MIRT609045 INVS inversin 2 4
MIRT619037 CASS4 Cas scaffolding protein family member 4 2 2
MIRT625226 RPSAP58 ribosomal protein SA pseudogene 58 2 4
MIRT625545 GABRB2 gamma-aminobutyric acid type A receptor beta2 subunit 2 2
MIRT627333 TTLL7 tubulin tyrosine ligase like 7 2 2
MIRT627954 NLK nemo like kinase 2 2
MIRT629280 UNC13A unc-13 homolog A 2 2
MIRT634982 TNFAIP8 TNF alpha induced protein 8 2 2
MIRT646129 C1orf147 chromosome 1 open reading frame 147 2 2
MIRT646370 SLC22A6 solute carrier family 22 member 6 2 2
MIRT652743 TGFA transforming growth factor alpha 2 4
MIRT653984 SEMA6A semaphorin 6A 2 2
MIRT660038 C15orf61 chromosome 15 open reading frame 61 2 2
MIRT663504 NKAPL NFKB activating protein like 2 4
MIRT667117 OCIAD2 OCIA domain containing 2 2 2
MIRT683747 C3orf36 chromosome 3 open reading frame 36 2 2
MIRT683922 SLC43A3 solute carrier family 43 member 3 2 2
MIRT684101 LHFP LHFPL tetraspan subfamily member 6 2 2
MIRT684224 FGF14 fibroblast growth factor 14 2 2
MIRT685560 SRD5A3 steroid 5 alpha-reductase 3 2 2
MIRT687408 NRXN1 neurexin 1 2 2
MIRT687467 NHSL2 NHS like 2 2 2
MIRT687695 LEPREL1 prolyl 3-hydroxylase 2 1 1
MIRT688094 GLRA3 glycine receptor alpha 3 2 2
MIRT688255 FHL2 four and a half LIM domains 2 2 3
MIRT688851 CAMKK2 calcium/calmodulin dependent protein kinase kinase 2 2 2
MIRT700293 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT704679 CHST2 carbohydrate sulfotransferase 2 2 2
MIRT706392 PPID peptidylprolyl isomerase D 2 2
MIRT707388 SLC35F6 solute carrier family 35 member F6 2 2
MIRT707509 PPP1R16B protein phosphatase 1 regulatory subunit 16B 2 2
MIRT709808 AR androgen receptor 2 2
MIRT715491 MAZ MYC associated zinc finger protein 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6818-5p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-6818-5p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-6818-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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