pre-miRNA Information
pre-miRNA hsa-mir-367   
Genomic Coordinates chr4: 112647874 - 112647941
Synonyms MIRN367, hsa-mir-367, MIR367
Description Homo sapiens miR-367 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-367-3p
Sequence 44| AAUUGCACUUUAGCAAUGGUGA |65
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN24411246 17 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs535597757 1 dbSNP
rs1013348949 11 dbSNP
rs896333735 12 dbSNP
rs751269136 14 dbSNP
rs1163501507 16 dbSNP
rs757092597 21 dbSNP
Putative Targets

Gene Information
Gene Symbol NUP43   
Synonyms bA350J20.1, p42
Description nucleoporin 43
Transcript NM_198887   
Expression
Putative miRNA Targets on NUP43
3'UTR of NUP43
(miRNA target sites are highlighted)
>NUP43|NM_198887|3'UTR
   1 AAGTACTATAATTATAAGATTTCAGATAGAACATGCAATTAGCCTTTTGAAATCCAACTTCTGTGCAAAATTTTAGTATC
  81 AGAAAATACGAGATTTGCAGGGGAAACATCAGTAAACTACCATTAATGTCAATGCCCAGTTTTGACTTTTGTTAGCCTGA
 161 CACTCCCAAACAGTTGTAGAATCCGATAGATGACTGATGGCAAAAGATTGTGAACATGTGGAAGAAAATCAGTGGGATTC
 241 TGGTGCTGATGAATAGGTTGCCTTCAGAGTATTATTGACAGACAGCTTGTGGAACTAATTCTTTATTTTTGATGTTGTGG
 321 GAATTAACACATCAATGGTGGTTATGGGAACTACCAATGGGTTCCTACAATTTTTATCAGTAGTATGTGGCATATACACC
 401 TTCCTAGTGGCAGTTGCCAATGTTAATGATTATTCTTTTTATTGCAAGTATTTCCTATGATCCTTCCACACTTTATTTCC
 481 TTAATAATAATAAACTTTTTCAGAAAGAATTGAGTAGAGCAAAAATGACAAAGATGTGTAGCTGTGTTCAATTTTTTTTT
 561 TTTTTTTTTTTTGAGGCAGAGTCTTGCTCTGCTGGAGTGCGGTGGTGCAATCTCGGCTCACTGCAACCTCCACCTCCCAG
 641 GTTCAAGCAATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGAACTACAGGTGTGCGCCACCACGCCCAGCTAATTTTTGTA
 721 ATTTTAGTAGAGACAGAGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGACCT
 801 CCCAAAGTGCTGTGATTACAGGTGTGAGCCACTGCACCCGGCCTGAAATTTTTTTAAGGTGAAAATGTTTTGACAAGTTC
 881 CTTTTTCAGAATAGGTTTTTGAGCAGAACTCTTTCAGCTTGTTAGACCCAACTTTGCTTTTGTTTAGCTTCACAGCATAG
 961 CTGAAAGTTGCCAAACTGGACATTGTGCAATAAAGTAGAATTCTATATTGATAAGCAAACTATTTCCAAACTAAAAATGT
1041 GATAGATAAAAGTGTGATTAATCAAATGATATGATCAGAGTAAAGAATTTTGCCATTTTGATCCTTTTACTTTGTTTTAG
1121 CCACCTATAGTGTTACCAACCATCTTTATCCTTGTCTGCAGGGATAATAATGAACTAATGTAGTGTTTTAAGATAATTTA
1201 ATGATACTATCTTTCCAAACTTTGTTAGATTTTAAATGTATTATTGACCTGAGACCTTAATGACAAATCACTGCTATTAG
1281 ACAATTGAAGTGTTCATTTACTTTGTAATTCCAATAATCATAGTTATGGAATTATGGTAAGGTTTTGCTTTTCTGTCCTA
1361 ATAAATATATATATTTTTTGAGATGGAGTTTTGCTCTTGTTGCTGAGGCTGGAGTGAAATGGCATGATCTCAGCTCACTG
1441 CAACCTCCGTCTCTTAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCTCACCACCACA
1521 CCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACTGTGTTGGCCAGGCTGGTCTTGAACTGACCTCATGATCC
1601 ACCTGCCTCAGCCTCCCAAAATGCTGGGATTACAGGCTTGAGCCACTGCTCCCGGCTGATTTTTGTATTAGTAGAGACGA
1681 CAGGGTTTCACCATGTTGGCCAGGGCTGGTCTCGAACTCCTGACCACAGGTAATCAGCCCGCCTCGGCCTCCCAAAGTGC
1761 TGGGATTACAGGCGTGAGCCACTTAGTATTTGTAACCATAAGAGAAAGTATATTTTAACAGCATTACATTTCATGCCAAT
1841 TGACAAGTTTTGCCAATTTTAATAAGAAACTAAGCTTTATGTAATGTAACACCGTAATTTATGAATTTGTTCATTGTCAC
1921 TGCCTTTATTCATGAAACTGTCAAATAGAGTGTCTTTCAAGGGTTGCAGGATCTTAGAGATAGAAAGTACCTTGGTGATC
2001 ATCTCCAGCCTAAATTTCATCATCCCTTCTATGGTATTCCCAACAAATTATCATCCAACCTATACTTAAAAACATATGGT
2081 GGCCAGGCATGGTGGCTCACGCCTGTAATGCTAGCACTTTGGGAGGCCGAGGTGGGTGAAGCACCTGAGGTCAAGAGTTC
2161 GAGATCAGCCTGGCCAACATGGCGAAACCCCGTCTCCACTAAAAATGCAAAAAAAAAATTAACCGGGCGTGGTGGCAGGC
2241 ATCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTCAAACCCGGGAGGCAGAGGTTGCAGTGACCCAAGA
2321 TCGTGCCACTTCACTCCAGCCTGGGCAAAAGAGCAAAACGCCATCTCAAAAAATATACATATATAAGGAGATAAAGTTTC
2401 CCATTTTCCAATACAGTTTCACATTTGAACAGCCCTAATTGATACAACTTTATGGCAGGGTTTTAGTGTGTGAGTGGGAT
2481 CCAAAACACTCAATCCTGTAAAAGGGTACAGTCCTATTGTATGTTAACACACTGATGATGTGAGCCTGTGAGATGAGCCA
2561 ATCACCAGTTGTTATGTTCGAATCTGCTTTGTGTTGGGACGCTTTAATGTCAGGGTTTCACTAAATAAATGAATTTTCAT
2641 ATACTGAACTGAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aguggUAACGAUUUCACGUUAa 5'
               | ||| : :||||||| 
Target 5' gctggAGTGCGGTGGTGCAATc 3'
591 - 612 153.00 -14.13
2
miRNA  3' aguggUAACGAUUU---------CACGUUAa 5'
               :|||| |||         ||||||| 
Target 5' tgaaaGTTGCCAAACTGGACATTGTGCAATa 3'
962 - 992 149.00 -10.00
3
miRNA  3' agUGGUAACGAUUUCACGUUAa 5'
            :|::  |||::|||| ||| 
Target 5' ttGCTGAGGCTGGAGTGAAATg 3'
1400 - 1421 132.00 -10.93
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN14201479 8 COSMIC
COSN30153144 25 COSMIC
COSN28843232 59 COSMIC
COSN31492911 122 COSMIC
COSN23446123 304 COSMIC
COSN18767239 552 COSMIC
COSN32070852 639 COSMIC
COSN7694075 775 COSMIC
COSN2147166 980 COSMIC
COSN21728912 1049 COSMIC
COSN28458262 1298 COSMIC
COSN30431960 1708 COSMIC
COSN2147165 1772 COSMIC
COSN25878214 1883 COSMIC
COSN2147164 2443 COSMIC
COSN26862201 2451 COSMIC
COSN32058173 2461 COSMIC
COSN20103484 2522 COSMIC
COSN15663137 2611 COSMIC
COSN4953395 2625 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1318030906 3 dbSNP
rs373503436 5 dbSNP
rs1226086983 6 dbSNP
rs775017306 8 dbSNP
rs1293551544 10 dbSNP
rs1306290774 13 dbSNP
rs763769155 18 dbSNP
rs769267727 24 dbSNP
rs1334858847 29 dbSNP
rs761240500 33 dbSNP
rs773705741 36 dbSNP
rs1431481188 40 dbSNP
rs1408578821 41 dbSNP
rs1349202771 45 dbSNP
rs763384458 55 dbSNP
rs1013036961 58 dbSNP
rs145737035 63 dbSNP
rs1418534499 71 dbSNP
rs1190016928 74 dbSNP
rs1200560533 75 dbSNP
rs1257615157 85 dbSNP
rs1035863422 89 dbSNP
rs1016654534 90 dbSNP
rs999076423 100 dbSNP
rs1252433608 108 dbSNP
rs181743108 118 dbSNP
rs1473489914 119 dbSNP
rs775590933 122 dbSNP
rs1421933719 138 dbSNP
rs1007030712 145 dbSNP
rs1376152368 146 dbSNP
rs769795094 154 dbSNP
rs1173343947 161 dbSNP
rs1177787326 162 dbSNP
rs1308029726 171 dbSNP
rs1351568241 173 dbSNP
rs1393513618 184 dbSNP
rs746070424 185 dbSNP
rs1330184221 186 dbSNP
rs946358607 198 dbSNP
rs749617823 199 dbSNP
rs55858240 206 dbSNP
rs932404292 219 dbSNP
rs1203811117 220 dbSNP
rs1198460589 221 dbSNP
rs1335955137 224 dbSNP
rs902092339 234 dbSNP
rs1189279818 237 dbSNP
rs748001004 246 dbSNP
rs1433529533 250 dbSNP
rs1199918050 254 dbSNP
rs1275388385 261 dbSNP
rs1397114279 269 dbSNP
rs1243274151 271 dbSNP
rs1167974233 272 dbSNP
rs1321576445 276 dbSNP
rs1311478293 286 dbSNP
rs190886090 286 dbSNP
rs542987900 303 dbSNP
rs1378713734 304 dbSNP
rs1305266190 305 dbSNP
rs1362500923 312 dbSNP
rs1227049599 314 dbSNP
rs914546297 317 dbSNP
rs990267696 320 dbSNP
rs1219339829 327 dbSNP
rs1328827993 328 dbSNP
rs927182768 335 dbSNP
rs185983718 343 dbSNP
rs908448747 345 dbSNP
rs1255139223 353 dbSNP
rs1166750624 356 dbSNP
rs1188042995 357 dbSNP
rs573647844 359 dbSNP
rs1430362165 360 dbSNP
rs1367813819 361 dbSNP
rs1349809188 369 dbSNP
rs1159997200 370 dbSNP
rs1025505432 379 dbSNP
rs984083671 380 dbSNP
rs749201213 391 dbSNP
rs972596899 397 dbSNP
rs1236390870 400 dbSNP
rs1328279549 408 dbSNP
rs1386030506 412 dbSNP
rs1433952637 414 dbSNP
rs962373531 420 dbSNP
rs527867292 435 dbSNP
rs779589777 447 dbSNP
rs755633011 450 dbSNP
rs565522191 455 dbSNP
rs796749489 456 dbSNP
rs991944484 457 dbSNP
rs1265963988 460 dbSNP
rs960121471 462 dbSNP
rs866566485 467 dbSNP
rs1208402230 469 dbSNP
rs1035833743 475 dbSNP
rs1208428962 486 dbSNP
rs1488475806 490 dbSNP
rs1029199251 493 dbSNP
rs1261799340 501 dbSNP
rs998074276 502 dbSNP
rs902125288 505 dbSNP
rs999045450 506 dbSNP
rs1042004038 507 dbSNP
rs999885055 528 dbSNP
rs967563777 530 dbSNP
rs140711954 533 dbSNP
rs893150594 542 dbSNP
rs1306392423 544 dbSNP
rs1238990455 546 dbSNP
rs1371190303 549 dbSNP
rs1325356887 550 dbSNP
rs1384849190 551 dbSNP
rs1011868500 552 dbSNP
rs1445193002 561 dbSNP
rs1301698580 566 dbSNP
rs1389976575 570 dbSNP
rs1289405799 572 dbSNP
rs11305807 573 dbSNP
rs1185728070 573 dbSNP
rs1379843212 573 dbSNP
rs1416589636 573 dbSNP
rs67510773 573 dbSNP
rs750484001 573 dbSNP
rs775012311 573 dbSNP
rs781737476 573 dbSNP
rs1236937490 574 dbSNP
rs1491194406 574 dbSNP
rs1486026046 579 dbSNP
rs1421389743 582 dbSNP
rs1250238554 592 dbSNP
rs1054858302 600 dbSNP
rs937481565 601 dbSNP
rs1158056519 602 dbSNP
rs1454923367 603 dbSNP
rs866277742 605 dbSNP
rs1397107658 607 dbSNP
rs966585952 610 dbSNP
rs1359287653 615 dbSNP
rs893421769 615 dbSNP
rs1451358443 617 dbSNP
rs1049412081 619 dbSNP
rs1207430191 626 dbSNP
rs1306178903 629 dbSNP
rs1349724756 630 dbSNP
rs996523171 631 dbSNP
rs750080910 633 dbSNP
rs576615881 635 dbSNP
rs1375841427 642 dbSNP
rs1215253237 644 dbSNP
rs769430978 664 dbSNP
rs1217736587 671 dbSNP
rs556561051 674 dbSNP
rs1138982 675 dbSNP
rs1348770875 677 dbSNP
rs1213026719 680 dbSNP
rs1276228651 685 dbSNP
rs1230563550 694 dbSNP
rs1330325406 695 dbSNP
rs1183020845 699 dbSNP
rs1295958559 702 dbSNP
rs553827778 703 dbSNP
rs1358544991 707 dbSNP
rs939843577 711 dbSNP
rs1138980 735 dbSNP
rs1297730999 736 dbSNP
rs1435397626 739 dbSNP
rs1404665713 749 dbSNP
rs908405516 758 dbSNP
rs1330777831 767 dbSNP
rs1045600301 769 dbSNP
rs1274486481 781 dbSNP
rs534116150 785 dbSNP
rs1021938655 787 dbSNP
rs554549399 790 dbSNP
rs915864453 791 dbSNP
rs1341504817 794 dbSNP
rs756976234 795 dbSNP
rs1275706996 796 dbSNP
rs534958084 796 dbSNP
rs960088875 807 dbSNP
rs918397667 814 dbSNP
rs1186164101 823 dbSNP
rs1477165409 826 dbSNP
rs1198623236 829 dbSNP
rs928688825 832 dbSNP
rs1475446850 835 dbSNP
rs972629380 836 dbSNP
rs977533519 837 dbSNP
rs1192360991 839 dbSNP
rs1323912394 840 dbSNP
rs565732854 840 dbSNP
rs909582271 845 dbSNP
rs1280068965 856 dbSNP
rs985525296 857 dbSNP
rs1228243162 874 dbSNP
rs1198386606 876 dbSNP
rs953840973 877 dbSNP
rs57442931 889 dbSNP
rs1220226218 902 dbSNP
rs1338407089 904 dbSNP
rs1021794980 910 dbSNP
rs1012206531 920 dbSNP
rs1470083810 921 dbSNP
rs1206490336 935 dbSNP
rs374977413 937 dbSNP
rs1342362603 948 dbSNP
rs1194620517 949 dbSNP
rs1235682070 957 dbSNP
rs997906145 960 dbSNP
rs953666109 963 dbSNP
rs1191617312 976 dbSNP
rs966217655 977 dbSNP
rs1028382996 979 dbSNP
rs996449462 982 dbSNP
rs1414128039 987 dbSNP
rs1397480570 992 dbSNP
rs1157303786 998 dbSNP
rs1384446200 1000 dbSNP
rs1173349355 1009 dbSNP
rs900875455 1027 dbSNP
rs1382860904 1031 dbSNP
rs150946963 1032 dbSNP
rs1423595846 1038 dbSNP
rs569428437 1066 dbSNP
rs1474026006 1080 dbSNP
rs1238704399 1084 dbSNP
rs886903099 1103 dbSNP
rs1294423729 1107 dbSNP
rs1337486323 1109 dbSNP
rs1226870466 1114 dbSNP
rs1054485027 1121 dbSNP
rs1001929562 1122 dbSNP
rs41288437 1132 dbSNP
rs1441312406 1136 dbSNP
rs1188643341 1139 dbSNP
rs1057724 1144 dbSNP
rs1046255216 1155 dbSNP
rs931195319 1160 dbSNP
rs1200346321 1172 dbSNP
rs1315875386 1178 dbSNP
rs894412203 1179 dbSNP
rs1055746804 1194 dbSNP
rs1454469554 1201 dbSNP
rs938652380 1213 dbSNP
rs928657677 1214 dbSNP
rs1036815753 1229 dbSNP
rs1358300433 1234 dbSNP
rs1010505531 1243 dbSNP
rs1282568854 1253 dbSNP
rs1434172409 1256 dbSNP
rs879060253 1262 dbSNP
rs941319445 1263 dbSNP
rs1408405694 1273 dbSNP
rs529636196 1276 dbSNP
rs574757388 1282 dbSNP
rs1240805186 1291 dbSNP
rs1444773661 1295 dbSNP
rs1253868791 1296 dbSNP
rs914694616 1312 dbSNP
rs1210894430 1327 dbSNP
rs1282403963 1328 dbSNP
rs985171094 1335 dbSNP
rs1204218238 1336 dbSNP
rs373305372 1338 dbSNP
rs369846900 1342 dbSNP
rs370829803 1344 dbSNP
rs374926710 1347 dbSNP
rs1251029382 1360 dbSNP
rs990351045 1364 dbSNP
rs1166020808 1368 dbSNP
rs1184325065 1369 dbSNP
rs58941321 1371 dbSNP
rs922269248 1373 dbSNP
rs1377829120 1375 dbSNP
rs1412243054 1378 dbSNP
rs1298082566 1382 dbSNP
rs1397732288 1385 dbSNP
rs1029233402 1396 dbSNP
rs1393497357 1397 dbSNP
rs1298748398 1399 dbSNP
rs976500845 1405 dbSNP
rs1234415697 1406 dbSNP
rs976338329 1424 dbSNP
rs377205932 1428 dbSNP
rs1019243117 1429 dbSNP
rs1227638439 1431 dbSNP
rs1251807920 1437 dbSNP
rs371190943 1443 dbSNP
rs181683645 1448 dbSNP
rs886876541 1449 dbSNP
rs1265557095 1451 dbSNP
rs1456133782 1452 dbSNP
rs1468170193 1458 dbSNP
rs1020504432 1466 dbSNP
rs111309085 1468 dbSNP
rs565433428 1472 dbSNP
rs1001711051 1480 dbSNP
rs1287616807 1486 dbSNP
rs148862927 1487 dbSNP
rs1351533842 1488 dbSNP
rs894330939 1505 dbSNP
rs1463866089 1506 dbSNP
rs1292100428 1508 dbSNP
rs765336810 1509 dbSNP
rs374518792 1516 dbSNP
rs1327480452 1523 dbSNP
rs1362478401 1526 dbSNP
rs554690022 1527 dbSNP
rs1296219755 1535 dbSNP
rs146724585 1542 dbSNP
rs1242378933 1547 dbSNP
rs1272358981 1549 dbSNP
rs1335211047 1553 dbSNP
rs1327060210 1563 dbSNP
rs371064982 1568 dbSNP
rs1041751600 1573 dbSNP
rs1024278221 1584 dbSNP
rs946097758 1593 dbSNP
rs9322215 1594 dbSNP
rs990667596 1601 dbSNP
rs1348684446 1602 dbSNP
rs1323512094 1604 dbSNP
rs897240993 1606 dbSNP
rs932160732 1607 dbSNP
rs771071046 1609 dbSNP
rs941183312 1612 dbSNP
rs1462285392 1616 dbSNP
rs1166738044 1617 dbSNP
rs888257084 1633 dbSNP
rs1050125843 1634 dbSNP
rs1288898442 1638 dbSNP
rs1363411898 1639 dbSNP
rs932545821 1649 dbSNP
rs1292582958 1652 dbSNP
rs554184680 1653 dbSNP
rs976266198 1654 dbSNP
rs1159866944 1659 dbSNP
rs1437511136 1665 dbSNP
rs966275474 1666 dbSNP
rs1234834135 1669 dbSNP
rs976413141 1671 dbSNP
rs747241924 1678 dbSNP
rs540919665 1679 dbSNP
rs1478869793 1682 dbSNP
rs115090132 1684 dbSNP
rs1220759793 1691 dbSNP
rs982488742 1693 dbSNP
rs1409346460 1694 dbSNP
rs1399790432 1701 dbSNP
rs951146297 1703 dbSNP
rs558297494 1706 dbSNP
rs970326585 1707 dbSNP
rs1288332239 1713 dbSNP
rs1214520894 1714 dbSNP
rs1416415563 1718 dbSNP
rs995700783 1726 dbSNP
rs1286184091 1731 dbSNP
rs894266842 1735 dbSNP
rs189918542 1740 dbSNP
rs569543131 1741 dbSNP
rs1318883459 1742 dbSNP
rs1208739407 1743 dbSNP
rs374215894 1745 dbSNP
rs568987073 1746 dbSNP
rs907135544 1747 dbSNP
rs1041679514 1752 dbSNP
rs113476516 1755 dbSNP
rs1213601041 1773 dbSNP
rs1469933002 1774 dbSNP
rs1177492697 1778 dbSNP
rs893160086 1785 dbSNP
rs1365949997 1788 dbSNP
rs1430963374 1808 dbSNP
rs567150276 1809 dbSNP
rs1005609723 1812 dbSNP
rs1436548368 1817 dbSNP
rs888279483 1823 dbSNP
rs932061949 1830 dbSNP
rs1353769747 1833 dbSNP
rs146517490 1839 dbSNP
rs529171596 1846 dbSNP
rs932601249 1852 dbSNP
rs1232215774 1853 dbSNP
rs1040533376 1855 dbSNP
rs944937296 1856 dbSNP
rs9479096 1861 dbSNP
rs1237214806 1863 dbSNP
rs749229521 1869 dbSNP
rs184635889 1875 dbSNP
rs567275396 1883 dbSNP
rs9479094 1886 dbSNP
rs958454448 1889 dbSNP
rs1234276904 1890 dbSNP
rs1466829313 1891 dbSNP
rs180911556 1893 dbSNP
rs745315345 1894 dbSNP
rs1455185551 1909 dbSNP
rs1002687431 1910 dbSNP
rs373819628 1915 dbSNP
rs149975304 1922 dbSNP
rs1478139652 1932 dbSNP
rs980290313 1936 dbSNP
rs1191646020 1940 dbSNP
rs1010609047 1943 dbSNP
rs780863863 1947 dbSNP
rs527718149 1960 dbSNP
rs1443107007 1963 dbSNP
rs1054873029 1967 dbSNP
rs1212523010 1985 dbSNP
rs560246942 2004 dbSNP
rs540637736 2010 dbSNP
rs1278448244 2015 dbSNP
rs188131224 2019 dbSNP
rs751288977 2026 dbSNP
rs1342990802 2031 dbSNP
rs1276824909 2032 dbSNP
rs567686061 2033 dbSNP
rs571982238 2035 dbSNP
rs1253236345 2037 dbSNP
rs1339303441 2042 dbSNP
rs1190328958 2048 dbSNP
rs1241473274 2057 dbSNP
rs961376015 2060 dbSNP
rs1302850785 2067 dbSNP
rs1415466855 2079 dbSNP
rs1460722464 2081 dbSNP
rs564817062 2084 dbSNP
rs1395418408 2087 dbSNP
rs908086401 2089 dbSNP
rs952819017 2090 dbSNP
rs1175153335 2096 dbSNP
rs1465915751 2097 dbSNP
rs1432172821 2100 dbSNP
rs1272420378 2101 dbSNP
rs1425449679 2107 dbSNP
rs1028599110 2109 dbSNP
rs1168470270 2112 dbSNP
rs1232987705 2127 dbSNP
rs1047975216 2128 dbSNP
rs1336434724 2129 dbSNP
rs1256963340 2130 dbSNP
rs11961809 2131 dbSNP
rs1447062024 2133 dbSNP
rs1195321110 2134 dbSNP
rs1482434403 2135 dbSNP
rs1255229192 2146 dbSNP
rs1474764756 2154 dbSNP
rs531074867 2160 dbSNP
rs1237100780 2161 dbSNP
rs1473920493 2169 dbSNP
rs150832752 2171 dbSNP
rs1401356674 2172 dbSNP
rs1129792 2177 dbSNP
rs183753778 2183 dbSNP
rs1414580264 2184 dbSNP
rs1294252589 2187 dbSNP
rs1357731630 2191 dbSNP
rs377396941 2192 dbSNP
rs1278582030 2198 dbSNP
rs369822792 2199 dbSNP
rs1218578763 2206 dbSNP
rs1322846863 2207 dbSNP
rs1312882832 2208 dbSNP
rs1397244883 2212 dbSNP
rs1278130838 2215 dbSNP
rs1485280814 2219 dbSNP
rs892146520 2219 dbSNP
rs1259413381 2220 dbSNP
rs573690702 2225 dbSNP
rs1180014370 2226 dbSNP
rs981221785 2228 dbSNP
rs1376566751 2229 dbSNP
rs1363374160 2232 dbSNP
rs867663690 2233 dbSNP
rs1335706594 2241 dbSNP
rs1020539241 2242 dbSNP
rs753232088 2243 dbSNP
rs192682722 2250 dbSNP
rs1314004009 2254 dbSNP
rs765730251 2260 dbSNP
rs926371689 2262 dbSNP
rs1327779411 2263 dbSNP
rs1129798 2264 dbSNP
rs1032991581 2266 dbSNP
rs3177640 2287 dbSNP
rs1300676019 2288 dbSNP
rs1346490574 2291 dbSNP
rs760090022 2292 dbSNP
rs900541094 2293 dbSNP
rs1044985976 2294 dbSNP
rs1479539367 2296 dbSNP
rs553459376 2297 dbSNP
rs776632093 2301 dbSNP
rs1129820 2309 dbSNP
rs767511255 2318 dbSNP
rs1251277973 2322 dbSNP
rs1453806211 2323 dbSNP
rs1174895903 2327 dbSNP
rs533744793 2329 dbSNP
rs886572923 2335 dbSNP
rs1167671253 2346 dbSNP
rs1129805 2349 dbSNP
rs1129806 2350 dbSNP
rs1448561737 2351 dbSNP
rs1048113 2356 dbSNP
rs1048114 2357 dbSNP
rs1048137 2358 dbSNP
rs766465675 2359 dbSNP
rs759545326 2360 dbSNP
rs1368976787 2361 dbSNP
rs1369618456 2362 dbSNP
rs375620957 2364 dbSNP
rs930885495 2365 dbSNP
rs1303392812 2370 dbSNP
rs899392724 2376 dbSNP
rs1048117 2377 dbSNP
rs1055408405 2382 dbSNP
rs1305668836 2382 dbSNP
rs73779549 2383 dbSNP
rs1422102284 2384 dbSNP
rs1413117463 2399 dbSNP
rs565332615 2402 dbSNP
rs187804112 2405 dbSNP
rs1179522330 2427 dbSNP
rs926984368 2429 dbSNP
rs565374713 2430 dbSNP
rs1200767176 2435 dbSNP
rs1251373705 2443 dbSNP
rs141467915 2445 dbSNP
rs918820967 2461 dbSNP
rs1236804019 2472 dbSNP
rs1427293108 2472 dbSNP
rs1374007305 2478 dbSNP
rs997316057 2479 dbSNP
rs1162433705 2488 dbSNP
rs1198396723 2492 dbSNP
rs913036439 2493 dbSNP
rs1294740825 2496 dbSNP
rs1359199059 2499 dbSNP
rs1381599415 2504 dbSNP
rs569304148 2508 dbSNP
rs1231217156 2516 dbSNP
rs796402768 2517 dbSNP
rs201803152 2522 dbSNP
rs35374326 2523 dbSNP
rs139517059 2526 dbSNP
rs36055055 2526 dbSNP
rs4038372 2527 dbSNP
rs549562781 2533 dbSNP
rs1009524062 2535 dbSNP
rs1243199448 2541 dbSNP
rs1319424064 2542 dbSNP
rs1484901810 2556 dbSNP
rs140861209 2561 dbSNP
rs773475297 2563 dbSNP
rs892388353 2564 dbSNP
rs1263039034 2565 dbSNP
rs1479039829 2566 dbSNP
rs147288561 2575 dbSNP
rs1318366568 2579 dbSNP
rs1000521869 2580 dbSNP
rs1378654186 2586 dbSNP
rs1166405448 2587 dbSNP
rs904826916 2590 dbSNP
rs1033330750 2600 dbSNP
rs76176861 2611 dbSNP
rs1057221579 2612 dbSNP
rs35217409 2612 dbSNP
rs748061365 2612 dbSNP
rs80147756 2613 dbSNP
rs763293234 2615 dbSNP
rs546806452 2620 dbSNP
rs1229115414 2631 dbSNP
rs768489188 2632 dbSNP
rs143996380 2639 dbSNP
rs564182105 2643 dbSNP
rs1008906331 2644 dbSNP
rs544902109 2645 dbSNP
rs931349963 2648 dbSNP
rs1209303233 2650 dbSNP
rs1257283175 2652 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 348995.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aguggUAACGAUUU---------CACGUUAa 5'
               :|||| |||         ||||||| 
Target 5' ugaaaGUUGCCAAACUGGACAUUGUGCAAUa 3'
7 - 37
2
miRNA  3' agugGUAACGA-UUUCAcguuaa 5'
              ||| ||| |||||      
Target 5' ----CAUAGCUGAAAGUugccaa 3'
1 - 19
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000367403.3 | 3UTR | CAUAGCUGAAAGUUGCCAAACUGGACAUUGUGCAAUAAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE42095 Differentiated embryonic stem cells 0.635 5.7e-4 0.783 5.0e-6 23 Click to see details
GSE28260 Renal cortex and medulla 0.679 5.4e-3 0.592 1.7e-2 13 Click to see details
GSE32688 Pancreatic cancer -0.404 1.1e-2 -0.494 2.0e-3 32 Click to see details
GSE14794 Lymphoblastoid cells -0.232 1.4e-2 -0.273 4.6e-3 90 Click to see details
GSE38226 Liver fibrosis -0.317 8.1e-2 -0.312 8.4e-2 21 Click to see details
GSE15076 Monocyte-derived dendritic cells -0.652 1.2e-1 -0.700 9.4e-2 5 Click to see details
GSE21849 B cell lymphoma 0.146 2.2e-1 0.290 6.4e-2 29 Click to see details
GSE17498 Multiple myeloma 0.121 2.3e-1 0.072 3.3e-1 40 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.146 2.7e-1 0.244 1.5e-1 20 Click to see details
GSE26953 Aortic valvular endothelial cells 0.125 2.8e-1 -0.072 3.7e-1 24 Click to see details
GSE17306 Multiple myeloma -0.084 2.8e-1 0.293 2.1e-2 49 Click to see details
GSE19350 CNS germ cell tumors 0.175 2.9e-1 0.238 2.3e-1 12 Click to see details
GSE27834 Pluripotent stem cells -0.142 3.0e-1 -0.156 2.8e-1 16 Click to see details
GSE21687 Ependynoma primary tumors -0.058 3.2e-1 -0.292 9.6e-3 64 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.093 3.3e-1 0.137 2.6e-1 25 Click to see details
GSE28544 Breast cancer -0.078 3.6e-1 -0.158 2.3e-1 24 Click to see details
GSE28544 Breast cancer -0.078 3.6e-1 -0.158 2.3e-1 24 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
255 hsa-miR-367-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055315 DUSP5 dual specificity phosphatase 5 2 8
MIRT055791 PLEKHA1 pleckstrin homology domain containing A1 2 12
MIRT057114 DDIT4 DNA damage inducible transcript 4 2 4
MIRT059663 GATAD2B GATA zinc finger domain containing 2B 2 2
MIRT059926 ZDHHC5 zinc finger DHHC-type containing 5 2 2
MIRT061610 BTG2 BTG anti-proliferation factor 2 2 6
MIRT066478 HMGA2 high mobility group AT-hook 2 2 2
MIRT069388 ZFYVE21 zinc finger FYVE-type containing 21 2 2
MIRT069972 GEMIN2 gem nuclear organelle associated protein 2 2 2
MIRT074764 CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 2 2
MIRT076199 GID4 GID complex subunit 4 homolog 2 6
MIRT077512 UBE2Z ubiquitin conjugating enzyme E2 Z 2 4
MIRT077903 TOB1 transducer of ERBB2, 1 2 6
MIRT082250 MED29 mediator complex subunit 29 2 4
MIRT082434 CIC capicua transcriptional repressor 2 6
MIRT082474 PPP1R37 protein phosphatase 1 regulatory subunit 37 2 2
MIRT082778 ZNF264 zinc finger protein 264 2 2
MIRT084533 BCL2L11 BCL2 like 11 2 8
MIRT085309 UBXN4 UBX domain protein 4 2 8
MIRT086365 SSFA2 sperm specific antigen 2 2 8
MIRT087455 NF2 neurofibromin 2 2 2
MIRT088865 FOXN2 forkhead box N2 2 12
MIRT092185 ITPR1 inositol 1,4,5-trisphosphate receptor type 1 2 6
MIRT092326 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT093533 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 6
MIRT096935 PAPD7 poly(A) RNA polymerase D7, non-canonical 2 8
MIRT097026 MAP1B microtubule associated protein 1B 2 4
MIRT099137 MYLIP myosin regulatory light chain interacting protein 2 6
MIRT099905 SOX4 SRY-box 4 2 12
MIRT102289 DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 2 10
MIRT102507 KLHDC10 kelch domain containing 10 2 2
MIRT102891 INSIG1 insulin induced gene 1 2 2
MIRT109188 VMA21 VMA21, vacuolar ATPase assembly factor 2 4
MIRT124567 PRRC2B proline rich coiled-coil 2B 2 2
MIRT135568 SPRYD4 SPRY domain containing 4 2 2
MIRT161135 SLC25A36 solute carrier family 25 member 36 2 6
MIRT163995 KIAA1109 KIAA1109 2 4
MIRT164689 RNF4 ring finger protein 4 2 2
MIRT167705 HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 2 8
MIRT178956 USP28 ubiquitin specific peptidase 28 2 2
MIRT185717 ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 2 2
MIRT186264 TCEB3 elongin A 2 2
MIRT186537 TWF1 twinfilin actin binding protein 1 2 4
MIRT186628 COX20 COX20, cytochrome c oxidase assembly factor 2 8
MIRT189373 TXLNA taxilin alpha 2 4
MIRT197013 EIF1 eukaryotic translation initiation factor 1 2 10
MIRT206437 YIPF4 Yip1 domain family member 4 2 2
MIRT211228 FGF2 fibroblast growth factor 2 2 10
MIRT214529 C5ORF24 chromosome 5 open reading frame 24 2 2
MIRT216034 IL6ST interleukin 6 signal transducer 2 10
MIRT218084 TULP4 tubby like protein 4 2 2
MIRT242418 CCDC113 coiled-coil domain containing 113 2 2
MIRT243162 SOX11 SRY-box 11 2 2
MIRT250943 CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 2 4
MIRT253350 ZNF417 zinc finger protein 417 2 2
MIRT271968 ARF1 ADP ribosylation factor 1 2 2
MIRT273214 ZNF695 zinc finger protein 695 2 4
MIRT296114 SLC12A5 solute carrier family 12 member 5 2 2
MIRT301711 TEF TEF, PAR bZIP transcription factor 2 2
MIRT316477 ARID1B AT-rich interaction domain 1B 2 6
MIRT322174 CLN8 CLN8, transmembrane ER and ERGIC protein 2 4
MIRT341538 CNIH1 cornichon family AMPA receptor auxiliary protein 1 2 6
MIRT356062 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT443579 PPIC peptidylprolyl isomerase C 2 2
MIRT448825 FKBP1A FK506 binding protein 1A 2 4
MIRT451494 FOPNL FGFR1OP N-terminal like 2 2
MIRT452694 MDM2 MDM2 proto-oncogene 2 2
MIRT453167 CNOT4 CCR4-NOT transcription complex subunit 4 2 6
MIRT454588 SLC33A1 solute carrier family 33 member 1 2 4
MIRT455794 TAF8 TATA-box binding protein associated factor 8 2 4
MIRT456010 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456044 KIAA1586 KIAA1586 2 2
MIRT456763 TMEM239 transmembrane protein 239 2 4
MIRT458068 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT459230 MRPS21 mitochondrial ribosomal protein S21 2 2
MIRT459534 MFF mitochondrial fission factor 2 6
MIRT459759 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT460236 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT461104 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462924 ZNRF3 zinc and ring finger 3 2 2
MIRT463476 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463516 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT465503 TOR1B torsin family 1 member B 2 2
MIRT469525 RBFOX2 RNA binding protein, fox-1 homolog 2 2 8
MIRT470079 PTGES2 prostaglandin E synthase 2 2 2
MIRT471581 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT473451 MCOLN2 mucolipin 2 2 8
MIRT475882 H3F3C H3 histone family member 3C 2 10
MIRT475915 H3F3B H3 histone family member 3B 2 8
MIRT476195 GOLGA8A golgin A8 family member A 2 10
MIRT476318 GM2A GM2 ganglioside activator 2 2
MIRT476676 FUT11 fucosyltransferase 11 2 10
MIRT478368 DDI2 DNA damage inducible 1 homolog 2 2 2
MIRT479545 CDC5L cell division cycle 5 like 2 2
MIRT481024 BAZ2B bromodomain adjacent to zinc finger domain 2B 2 2
MIRT491009 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT493168 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT494345 CASKIN1 CASK interacting protein 1 2 2
MIRT499087 ZDHHC21 zinc finger DHHC-type containing 21 2 6
MIRT500029 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501298 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 4
MIRT503124 BCL11B B-cell CLL/lymphoma 11B 2 8
MIRT503301 GTF2A1 general transcription factor IIA subunit 1 2 6
MIRT504328 ASGR2 asialoglycoprotein receptor 2 2 6
MIRT504471 EID2B EP300 interacting inhibitor of differentiation 2B 2 2
MIRT504655 RPL9 ribosomal protein L9 2 6
MIRT505331 TMF1 TATA element modulatory factor 1 2 8
MIRT505732 SERTAD3 SERTA domain containing 3 2 4
MIRT505827 RSBN1 round spermatid basic protein 1 2 8
MIRT506004 PURG purine rich element binding protein G 2 8
MIRT506308 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 2 6
MIRT506806 KLHL15 kelch like family member 15 2 6
MIRT507119 GOLGA8B golgin A8 family member B 2 6
MIRT507353 FAM129A family with sequence similarity 129 member A 2 6
MIRT507591 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT507674 CPEB4 cytoplasmic polyadenylation element binding protein 4 2 4
MIRT507703 CNOT2 CCR4-NOT transcription complex subunit 2 2 8
MIRT508012 BCAT1 branched chain amino acid transaminase 1 2 4
MIRT510439 ZIC5 Zic family member 5 2 6
MIRT510539 XKR7 XK related 7 2 4
MIRT510600 TPPP tubulin polymerization promoting protein 2 6
MIRT511060 NRAS NRAS proto-oncogene, GTPase 2 4
MIRT511855 GOLGA8J golgin A8 family member J 2 6
MIRT511865 GOLGA8I golgin A8 family member I, pseudogene 1 3
MIRT512570 CTDSPL CTD small phosphatase like 2 2
MIRT512708 ZNF134 zinc finger protein 134 2 6
MIRT513177 MOAP1 modulator of apoptosis 1 2 6
MIRT513783 PAWR pro-apoptotic WT1 regulator 2 6
MIRT515099 IRGQ immunity related GTPase Q 2 2
MIRT515481 INCENP inner centromere protein 2 4
MIRT517416 BMP8A bone morphogenetic protein 8a 2 2
MIRT518754 C1orf35 chromosome 1 open reading frame 35 2 2
MIRT519780 ZNF354B zinc finger protein 354B 2 4
MIRT519865 ZFP62 ZFP62 zinc finger protein 2 6
MIRT520510 TRAM2 translocation associated membrane protein 2 2 6
MIRT521068 SLC25A32 solute carrier family 25 member 32 2 6
MIRT526912 ZNF772 zinc finger protein 772 2 6
MIRT527134 GULP1 GULP, engulfment adaptor PTB domain containing 1 2 2
MIRT527867 SLC39A14 solute carrier family 39 member 14 2 2
MIRT528404 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT532956 ZNF24 zinc finger protein 24 2 4
MIRT533021 ZFC3H1 zinc finger C3H1-type containing 2 4
MIRT533191 WASL Wiskott-Aldrich syndrome like 2 6
MIRT534191 SLC7A11 solute carrier family 7 member 11 2 2
MIRT534961 PTAR1 protein prenyltransferase alpha subunit repeat containing 1 2 4
MIRT536396 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT537046 GRAMD4 GRAM domain containing 4 2 2
MIRT537125 GOLGA3 golgin A3 2 4
MIRT537183 GFPT2 glutamine-fructose-6-phosphate transaminase 2 2 4
MIRT537652 ERGIC2 ERGIC and golgi 2 2 4
MIRT538632 CCSER2 coiled-coil serine rich protein 2 2 4
MIRT539231 ANP32E acidic nuclear phosphoprotein 32 family member E 2 6
MIRT540099 NPY4R neuropeptide Y receptor Y4 2 2
MIRT540998 ZNF460 zinc finger protein 460 2 4
MIRT541468 AURKA aurora kinase A 2 2
MIRT542680 SESN3 sestrin 3 2 2
MIRT542757 PRRG4 proline rich and Gla domain 4 2 2
MIRT542863 NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 2 2
MIRT542925 HOXC8 homeobox C8 2 2
MIRT543747 SZRD1 SUZ RNA binding domain containing 1 2 2
MIRT544404 ZSCAN12 zinc finger and SCAN domain containing 12 2 2
MIRT544583 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 4
MIRT544662 MED19 mediator complex subunit 19 2 2
MIRT545251 GTF2E1 general transcription factor IIE subunit 1 2 2
MIRT545261 TRIM36 tripartite motif containing 36 2 4
MIRT545744 UHRF1BP1 UHRF1 binding protein 1 2 2
MIRT545999 WDR81 WD repeat domain 81 2 2
MIRT546038 VPS4B vacuolar protein sorting 4 homolog B 2 2
MIRT547170 PDZD8 PDZ domain containing 8 2 2
MIRT547273 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT547729 KIF5B kinesin family member 5B 2 2
MIRT548127 GATA6 GATA binding protein 6 2 2
MIRT548203 FNIP1 folliculin interacting protein 1 2 2
MIRT548756 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT549641 ZNF75A zinc finger protein 75a 2 2
MIRT549684 ZNF598 zinc finger protein 598 2 2
MIRT550197 MRO maestro 2 2
MIRT550340 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT550536 MYZAP myocardial zonula adherens protein 2 2
MIRT550975 TOR4A torsin family 4 member A 2 2
MIRT551221 CIDEC cell death inducing DFFA like effector c 2 2
MIRT551355 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT551571 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT552277 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552661 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT553081 UCK2 uridine-cytidine kinase 2 2 2
MIRT553753 TBC1D8 TBC1 domain family member 8 2 2
MIRT554030 SPCS3 signal peptidase complex subunit 3 2 2
MIRT554099 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT554155 SLX4 SLX4 structure-specific endonuclease subunit 2 2
MIRT554815 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT555522 PMEPA1 prostate transmembrane protein, androgen induced 1 2 2
MIRT555597 PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma 2 2
MIRT555632 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 4
MIRT555679 PGAM4 phosphoglycerate mutase family member 4 2 4
MIRT555827 PAX9 paired box 9 2 2
MIRT555868 PAIP1 poly(A) binding protein interacting protein 1 2 2
MIRT555939 NUP43 nucleoporin 43 2 2
MIRT555994 NFYB nuclear transcription factor Y subunit beta 2 2
MIRT556340 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT556432 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT556585 LHFPL2 LHFPL tetraspan subfamily member 2 2 4
MIRT556801 KIAA1958 KIAA1958 2 2
MIRT558047 EXOC5 exocyst complex component 5 2 2
MIRT558697 CLTA clathrin light chain A 2 2
MIRT559191 BMPR1A bone morphogenetic protein receptor type 1A 2 4
MIRT559639 AKAP10 A-kinase anchoring protein 10 2 2
MIRT559707 AEN apoptosis enhancing nuclease 2 2
MIRT560673 SRFBP1 serum response factor binding protein 1 2 2
MIRT560990 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT562170 HOXA13 homeobox A13 2 2
MIRT562275 GNAQ G protein subunit alpha q 2 2
MIRT563624 ZNF277 zinc finger protein 277 2 2
MIRT563815 FMN1 formin 1 2 2
MIRT564096 TLR3 toll like receptor 3 2 2
MIRT565320 TMEM41A transmembrane protein 41A 2 2
MIRT565986 RNF44 ring finger protein 44 2 2
MIRT566047 REV3L REV3 like, DNA directed polymerase zeta catalytic subunit 2 2
MIRT568236 C11orf24 chromosome 11 open reading frame 24 2 2
MIRT568310 BAK1 BCL2 antagonist/killer 1 2 2
MIRT572376 ATOX1 antioxidant 1 copper chaperone 2 2
MIRT574822 CPEB3 cytoplasmic polyadenylation element binding protein 3 2 2
MIRT609212 PELP1 proline, glutamate and leucine rich protein 1 2 2
MIRT616217 RBM27 RNA binding motif protein 27 2 2
MIRT629087 FASLG Fas ligand 2 2
MIRT632124 FKBP9 FK506 binding protein 9 2 2
MIRT632576 POLQ DNA polymerase theta 2 2
MIRT634799 ENTHD1 ENTH domain containing 1 2 2
MIRT636553 ESRP1 epithelial splicing regulatory protein 1 2 2
MIRT640977 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT653875 SH2B3 SH2B adaptor protein 3 2 2
MIRT655598 OTUD7B OTU deubiquitinase 7B 2 2
MIRT659764 CCDC171 coiled-coil domain containing 171 2 2
MIRT660744 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT681037 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT682305 RBM28 RNA binding motif protein 28 2 2
MIRT682573 EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 2 2
MIRT686217 ZNF267 zinc finger protein 267 2 2
MIRT687209 PLXNA3 plexin A3 2 2
MIRT690630 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT692419 AGMAT agmatinase 2 2
MIRT694437 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT700725 PNO1 partner of NOB1 homolog 2 2
MIRT701549 NARF nuclear prelamin A recognition factor 2 2
MIRT704379 DAND5 DAN domain BMP antagonist family member 5 2 2
MIRT707935 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 2
MIRT709939 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT711371 MED7 mediator complex subunit 7 2 2
MIRT712327 PER2 period circadian clock 2 2 2
MIRT714515 SHE Src homology 2 domain containing E 2 2
MIRT715520 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT724294 OSMR oncostatin M receptor 2 2
MIRT725358 MUC21 mucin 21, cell surface associated 2 2
MIRT732242 KLF4 Kruppel like factor 4 3 1
MIRT735384 SPAG5 sperm associated antigen 5 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-367 Medpor NULL NULL Microarray osteoblast-like cells line (MG-63) 18408260 2008 up-regulated
miR-367 Activin A NULL 229455 Quantitative real-time PCR Human embryonic stem (hES) cells 19885849 2010 up-regulated
miR-367 Mistletoe lectin-I NULL NULL Microarray colorectal cancer cells CLY cells 20955366 2011 down-regulated
miR-367 Doxorubicin approved 31703 Quantitative real-time PCR heart 22859947 2012 up-regulated
miR-367 Paclitaxel approved 36314 Microarray Ovarian cancer cell lines 24220856 2014 up-regulated
miR-367 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-367 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Siop Treatment Protocol sensitive High Nephroblastoma tissue
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved resistant High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved sensitive High Hepatocellular Carcinoma tissue and cell line (HepG2)
hsa-miR-367-3p Mitoxantrone 4212 NSC279836 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Sorafenib 216239 NSC747971 approved sensitive Low Hepatocellular Carcinoma cell line (SKhep1, HA22T)
hsa-miR-367-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM16)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-367-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved resistant cell line (IGROV-1)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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