miRTarBase - #MIRT557132


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pre-miRNA Information
pre-miRNA hsa-mir-4477a   
Genomic Coordinates chr9: 41233755 - 41233835
Description Homo sapiens miR-4477a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4477a
Sequence 48| CUAUUAAGGACAUUUGUGAUUC |69
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1281813060 1 dbSNP
rs1352899679 1 dbSNP
rs1283566158 2 dbSNP
rs1236244724 4 dbSNP
rs75019967 4 dbSNP
rs1348124293 5 dbSNP
rs34026740 8 dbSNP
rs1288237115 9 dbSNP
rs71262206 10 dbSNP
rs1355759977 11 dbSNP
rs1300249508 16 dbSNP
rs1328879592 18 dbSNP
rs139133717 20 dbSNP
Putative Targets

Gene Information
Gene Symbol HOXA13   
Synonyms HOX1, HOX1J
Description homeobox A13
Transcript NM_000522   
Expression
Putative miRNA Targets on HOXA13
3'UTR of HOXA13
(miRNA target sites are highlighted)		 
>HOXA13|NM_000522|3'UTR
   1 TGGATTAAAAATAGAGCAAGAAGGCAACTTGAAGAAACGCTTCAGAACTCGTTGCTTTGCCCAGATAATGATAATAATGC
  81 TTAATAATAATTGAAGAATGGGAAAGAGAAAGAGACAGAGACTGGCATTTTCCTCTCCCGAAGGAGATCTCTTTCTCTTT
 161 AATGGAATCTACAACTGTTTTAAAACTTTAAGAAAGGTAAAGACTGCCAGTTCTTCCGCCAACCCCATCAGCCCAGCCCG
 241 TTAAATGTCAAACGTCAACCCCCAAAATACGCAATTTCAGATAAGTTACGCAGTTACTGAAATCTTGTAAGTATTTAAGT
 321 GATCGTTACATTTTAGGACACTGCGTTAGATGGTAATAATCTGGAAGTTGGTTACAAACGCAAGAGGCCATTGTAAACAT
 401 CTGCTTGTCCTTCTTAGGTCGCCATTCCCTTTGCATGTTAAGCGTCTGCTCAGGTAAATCTTAGTGAAATTCCTACCGTT
 481 GTTGTACGTTCTGCAAAACATTTTATGTATAGATTTAGAGGGGAAACGAGAAGGTACTGAAATAATGATCTTGGAATATT
 561 TGCTGTGAAGGGAGAAAGGGAGAGAAAACTCTTCTGAGGATCATTTGTCTTGGTAGTATAGTAAAACCAACCAGCTGAAC
 641 CTTTCAGGCTACAAGAGAACCCGGGTCGGTAATGTCTTTTTAAGAATAATTTTTAATTGCTTATAACAAGCATATTTTGT
 721 GGCATTTGAACTATATTTACTGCTCCAATATCCGTTATTTTCCAAAGGATTTTGTATCTTTTTGAAAATGTTTACATCAT
 801 CAGATGATCCACAGAATTCACTTTATGTGAGATCTCCCGAGAGTTTCCATCCCAACATGATGGACTTTGGTTTGAACACA
 881 ATTCGTTTTTTCATTTGAATTGGCATTTCCCAATATTTGCTAAACATTTGCTGGAGAAATCATTTTTCTTTTTTCTTTTT
 961 TAGAAAACTCAGAATGAAAATTCATTCCCCTGAAATATTTAGGTGTCTATATTCTATATTTTGATCTATTAAGGGATTAG
1041 TATTTTTCCATGTTTATTGTGTTATCAGAGTGCATTAGAAAGATTAGTGATTCATCTTCACAGCACATTTTTAATCAAGC
1121 AGTTATTTCAACCAGCACATTCGTTTTGTTCATATTCACTATAGAATGATATCTTGTAAATAAAGACATTCAGCACACTG
1201 TGAAAATGTATTTGTGCACCTGCTTTTTAAATATTTCTACTAAAAATGAAAAAAAAAAACCCTTAGACCTGTAGATAGTG
1281 ATATCGTAATATTAATTGTTAATAAAATAGTCACTGCC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cuUAGUGU--UUACAGGAAUUAUc 5'
            || |:|  ||||  ||||||| 
Target 5' taATGATAATAATG--CTTAATAa 3'
 66 - 87 158.00 -5.90
2 
miRNA  3' cuuAGUGUU-UACAGGAAUUAuc 5'
             |||||: |  |::|||||  
Target 5' tctTCACAGCACATTTTTAATca 3'
 1095 - 1117 127.00 -5.90
3 
miRNA  3' cuUAGUGUUUACAGGAAUUAUc 5'
            ||| |   | ||:|||||: 
Target 5' agATCTC-TTTCTCTTTAATGg 3'
 145 - 165 123.00 -9.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30157168 20 COSMIC
COSN31494350 61 COSMIC
COSN30189076 79 COSMIC
COSN30180959 95 COSMIC
COSN15660938 116 COSMIC
COSN14282725 125 COSMIC
COSN31489979 135 COSMIC
COSN30491221 140 COSMIC
COSN31558311 146 COSMIC
COSN31586872 149 COSMIC
COSN31612005 151 COSMIC
COSN17839599 175 COSMIC
COSN31600705 213 COSMIC
COSN31587610 218 COSMIC
COSN30166476 231 COSMIC
COSN31586627 239 COSMIC
COSN4933007 289 COSMIC
COSN32200499 584 COSMIC
COSN4933006 689 COSMIC
COSN8516355 753 COSMIC
COSN26562552 819 COSMIC
COSN26561807 856 COSMIC
COSN28722922 859 COSMIC
COSN28825273 875 COSMIC
COSN31572548 884 COSMIC
COSN31559540 885 COSMIC
COSN26137203 904 COSMIC
COSN31517904 936 COSMIC
COSN31606729 963 COSMIC
COSN21529506 1124 COSMIC
COSN31570691 1151 COSMIC
COSN30161330 1228 COSMIC
COSN20104029 1249 COSMIC
COSN7976370 1257 COSMIC
COSN26632466 1259 COSMIC
COSN28808865 1272 COSMIC
COSN8516354 1272 COSMIC
COSN5099669 1296 COSMIC
COSN20627733 1350 COSMIC
COSN20706085 1663 COSMIC
COSN29283035 1799 COSMIC
COSN29889371 2209 COSMIC
COSN16446870 2394 COSMIC
COSN22119317 2670 COSMIC
COSN17637717 2799 COSMIC
COSN9984121 2973 COSMIC
COSN25036480 3201 COSMIC
COSN9940461 3243 COSMIC
COSN4933005 3626 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1195178969 4 dbSNP
rs1202751933 9 dbSNP
rs948181722 17 dbSNP
rs746043394 21 dbSNP
rs774811041 23 dbSNP
rs375825948 24 dbSNP
rs757359297 25 dbSNP
rs1284324156 26 dbSNP
rs536675514 27 dbSNP
rs758828890 39 dbSNP
rs763736448 42 dbSNP
rs753166426 45 dbSNP
rs368079328 49 dbSNP
rs199530619 50 dbSNP
rs138250182 51 dbSNP
rs992295437 55 dbSNP
rs1392103909 61 dbSNP
rs745642211 62 dbSNP
rs1326841658 64 dbSNP
rs918920181 70 dbSNP
rs971738459 71 dbSNP
rs1281302488 72 dbSNP
rs1031128034 75 dbSNP
rs556198527 78 dbSNP
rs909428055 79 dbSNP
rs527841320 83 dbSNP
rs1214635593 93 dbSNP
rs1273464189 106 dbSNP
rs986802238 108 dbSNP
rs41303372 113 dbSNP
rs1214485225 114 dbSNP
rs756935287 123 dbSNP
rs968694112 139 dbSNP
rs17472448 147 dbSNP
rs1006926235 148 dbSNP
rs1415505341 153 dbSNP
rs1331538765 157 dbSNP
rs890885587 159 dbSNP
rs1165327172 165 dbSNP
rs552000250 167 dbSNP
rs1030940313 182 dbSNP
rs531905343 194 dbSNP
rs1352252185 195 dbSNP
rs1029450353 196 dbSNP
rs386711532 198 dbSNP
rs976191265 199 dbSNP
rs1405855212 202 dbSNP
rs539703551 206 dbSNP
rs777300786 213 dbSNP
rs1234309677 217 dbSNP
rs897014156 218 dbSNP
rs1363337626 223 dbSNP
rs1020391479 238 dbSNP
rs755586870 239 dbSNP
rs1212512319 246 dbSNP
rs752050407 253 dbSNP
rs1038203457 254 dbSNP
rs1208733052 257 dbSNP
rs941295823 262 dbSNP
rs1486581834 264 dbSNP
rs1422700547 270 dbSNP
rs1443724609 271 dbSNP
rs577084162 275 dbSNP
rs1045089726 277 dbSNP
rs1032230148 283 dbSNP
rs563230974 284 dbSNP
rs780414419 286 dbSNP
rs1377332367 289 dbSNP
rs1415984418 290 dbSNP
rs1298119727 293 dbSNP
rs1325111359 300 dbSNP
rs1433254853 305 dbSNP
rs948019205 307 dbSNP
rs181575995 308 dbSNP
rs529737004 309 dbSNP
rs992224989 310 dbSNP
rs1231228157 314 dbSNP
rs1262317178 317 dbSNP
rs758971705 329 dbSNP
rs1203964528 334 dbSNP
rs750755737 341 dbSNP
rs979971428 345 dbSNP
rs968349413 350 dbSNP
rs2189239 364 dbSNP
rs1477851618 367 dbSNP
rs985719375 368 dbSNP
rs761974114 380 dbSNP
rs1397041875 382 dbSNP
rs941672380 386 dbSNP
rs755100255 387 dbSNP
rs955240492 394 dbSNP
rs1029330814 398 dbSNP
rs1310533337 402 dbSNP
rs1383350427 403 dbSNP
rs368768374 407 dbSNP
rs896874514 413 dbSNP
rs751375036 416 dbSNP
rs534026079 417 dbSNP
rs923457940 420 dbSNP
rs1005773605 422 dbSNP
rs1260108446 423 dbSNP
rs572216787 425 dbSNP
rs976624259 427 dbSNP
rs1284743680 429 dbSNP
rs1450816768 444 dbSNP
rs967544167 449 dbSNP
rs1255059570 452 dbSNP
rs913297781 457 dbSNP
rs764166762 460 dbSNP
rs1424016150 463 dbSNP
rs558463011 465 dbSNP
rs1380670522 475 dbSNP
rs990245078 478 dbSNP
rs905793079 487 dbSNP
rs1406013851 488 dbSNP
rs545221875 491 dbSNP
rs760681821 495 dbSNP
rs1014152110 501 dbSNP
rs1490517420 505 dbSNP
rs1271144539 506 dbSNP
rs143288289 511 dbSNP
rs1441037539 512 dbSNP
rs1056380821 534 dbSNP
rs1002121673 535 dbSNP
rs969744126 538 dbSNP
rs1024899686 539 dbSNP
rs1013332650 541 dbSNP
rs935423533 545 dbSNP
rs897680293 551 dbSNP
rs924006037 562 dbSNP
rs1036058079 565 dbSNP
rs1261654669 582 dbSNP
rs1469036569 590 dbSNP
rs369224556 601 dbSNP
rs1043915325 602 dbSNP
rs1420948838 613 dbSNP
rs1183234040 614 dbSNP
rs887448395 619 dbSNP
rs1474450855 620 dbSNP
rs1050548814 621 dbSNP
rs1395650444 636 dbSNP
rs931677175 642 dbSNP
rs946905111 651 dbSNP
rs1393767580 652 dbSNP
rs1040669393 654 dbSNP
rs946170379 656 dbSNP
rs913429955 666 dbSNP
rs749435539 667 dbSNP
rs957479625 668 dbSNP
rs1294954515 669 dbSNP
rs1335200842 674 dbSNP
rs772127350 676 dbSNP
rs1227049190 677 dbSNP
rs1249819377 682 dbSNP
rs986157360 684 dbSNP
rs759583110 690 dbSNP
rs980476333 694 dbSNP
rs780362916 695 dbSNP
rs1257463925 719 dbSNP
rs971424772 719 dbSNP
rs922271344 723 dbSNP
rs1419117533 742 dbSNP
rs1428275459 753 dbSNP
rs1013486136 754 dbSNP
rs1346846744 764 dbSNP
rs1463096579 767 dbSNP
rs1167939089 774 dbSNP
rs189176903 776 dbSNP
rs1314638177 801 dbSNP
rs536208312 814 dbSNP
rs887491765 820 dbSNP
rs1309437395 832 dbSNP
rs1228404056 837 dbSNP
rs961134577 839 dbSNP
rs1345815608 842 dbSNP
rs1028747564 854 dbSNP
rs757181 859 dbSNP
rs553804409 866 dbSNP
rs1290594318 868 dbSNP
rs1185103795 869 dbSNP
rs1259257937 873 dbSNP
rs1490624866 885 dbSNP
rs1451296268 886 dbSNP
rs1005288384 898 dbSNP
rs970317833 904 dbSNP
rs534027141 925 dbSNP
rs770884580 927 dbSNP
rs571756186 930 dbSNP
rs1022792662 933 dbSNP
rs1014619384 937 dbSNP
rs1158569933 940 dbSNP
rs112139316 947 dbSNP
rs1452826067 948 dbSNP
rs1286952907 949 dbSNP
rs1040634921 950 dbSNP
rs1480923927 955 dbSNP
rs1431521648 963 dbSNP
rs1383059243 967 dbSNP
rs145750950 972 dbSNP
rs748886777 984 dbSNP
rs1236503757 985 dbSNP
rs891964405 986 dbSNP
rs1316792146 991 dbSNP
rs35379558 991 dbSNP
rs1214245947 994 dbSNP
rs531960332 995 dbSNP
rs999456191 996 dbSNP
rs185640292 998 dbSNP
rs777307609 1003 dbSNP
rs769550262 1012 dbSNP
rs1207428416 1015 dbSNP
rs1485061463 1021 dbSNP
rs1339835958 1034 dbSNP
rs911415475 1040 dbSNP
rs1203895010 1042 dbSNP
rs1156836468 1048 dbSNP
rs1346812985 1051 dbSNP
rs1457522072 1059 dbSNP
rs1325483346 1060 dbSNP
rs1392506138 1061 dbSNP
rs1054660907 1065 dbSNP
rs549666985 1070 dbSNP
rs1372658140 1073 dbSNP
rs1280774402 1074 dbSNP
rs934233740 1075 dbSNP
rs1222629079 1079 dbSNP
rs927330902 1084 dbSNP
rs980228162 1087 dbSNP
rs750191373 1097 dbSNP
rs142106798 1098 dbSNP
rs972404280 1106 dbSNP
rs1466821809 1107 dbSNP
rs1215146693 1109 dbSNP
rs961059191 1115 dbSNP
rs909529900 1116 dbSNP
rs1326529848 1118 dbSNP
rs950063976 1120 dbSNP
rs984315075 1122 dbSNP
rs969824733 1127 dbSNP
rs1472814577 1129 dbSNP
rs1297562779 1130 dbSNP
rs1380461347 1134 dbSNP
rs1415364190 1135 dbSNP
rs992036373 1136 dbSNP
rs1354068963 1138 dbSNP
rs1440033825 1142 dbSNP
rs1300418688 1143 dbSNP
rs551059409 1148 dbSNP
rs181330984 1157 dbSNP
rs1470410826 1160 dbSNP
rs1233078350 1161 dbSNP
rs1291869952 1163 dbSNP
rs961969634 1179 dbSNP
rs1023225806 1180 dbSNP
rs992579899 1193 dbSNP
rs560862832 1200 dbSNP
rs1201776428 1206 dbSNP
rs541067737 1214 dbSNP
rs1483370828 1217 dbSNP
rs1187095562 1222 dbSNP
rs776087357 1223 dbSNP
rs1476057099 1225 dbSNP
rs1195951644 1240 dbSNP
rs1427322107 1241 dbSNP
rs1261444963 1242 dbSNP
rs1184639078 1248 dbSNP
rs1408305867 1249 dbSNP
rs1418985586 1249 dbSNP
rs951933967 1249 dbSNP
rs1371218852 1256 dbSNP
rs998712643 1257 dbSNP
rs115525024 1258 dbSNP
rs2391397 1259 dbSNP
rs1274549247 1260 dbSNP
rs1284457764 1260 dbSNP
rs376190304 1260 dbSNP
rs398094939 1260 dbSNP
rs60250869 1260 dbSNP
rs747094796 1263 dbSNP
rs765172864 1263 dbSNP
rs767238415 1263 dbSNP
rs1210147552 1269 dbSNP
rs1339395889 1273 dbSNP
rs1278027071 1284 dbSNP
rs544845228 1285 dbSNP
rs1022288591 1286 dbSNP
rs1325831233 1298 dbSNP
rs1315432970 1311 dbSNP
rs1188504618 1315 dbSNP
rs576198667 1317 dbSNP
rs1434125425 1318 dbSNP
rs1018659324 1319 dbSNP
rs1380332975 1323 dbSNP
rs11984297 1324 dbSNP
rs1415429433 1325 dbSNP
rs1318136840 1332 dbSNP
rs1325019100 1339 dbSNP
rs562997621 1340 dbSNP
rs889838853 1345 dbSNP
rs776925253 1346 dbSNP
rs17427924 1351 dbSNP
rs1169779406 1355 dbSNP
rs892016617 1364 dbSNP
rs542518388 1367 dbSNP
rs901328443 1368 dbSNP
rs1164795940 1375 dbSNP
rs537951341 1384 dbSNP
rs771168079 1390 dbSNP
rs906044202 1397 dbSNP
rs372605722 1401 dbSNP
rs1445055766 1405 dbSNP
rs940251787 1406 dbSNP
rs1248807757 1407 dbSNP
rs909571654 1411 dbSNP
rs1191778829 1422 dbSNP
rs1396947675 1423 dbSNP
rs983768824 1436 dbSNP
rs972675257 1444 dbSNP
rs543293751 1448 dbSNP
rs1383327990 1450 dbSNP
rs146030625 1458 dbSNP
rs17501278 1473 dbSNP
rs1322137059 1475 dbSNP
rs1388864650 1477 dbSNP
rs1439550248 1478 dbSNP
rs1300687076 1479 dbSNP
rs1332286128 1480 dbSNP
rs1233957225 1484 dbSNP
rs1223690740 1485 dbSNP
rs907775729 1490 dbSNP
rs1252019452 1495 dbSNP
rs757622765 1498 dbSNP
rs1229958333 1503 dbSNP
rs1269039570 1505 dbSNP
rs571629419 1506 dbSNP
rs17501271 1507 dbSNP
rs1338213792 1510 dbSNP
rs1452236068 1510 dbSNP
rs1181733547 1513 dbSNP
rs114253820 1514 dbSNP
rs115312085 1518 dbSNP
rs1357008031 1524 dbSNP
rs1160300080 1531 dbSNP
rs1417562957 1533 dbSNP
rs1323471150 1537 dbSNP
rs368409798 1541 dbSNP
rs977344339 1548 dbSNP
rs1392279561 1552 dbSNP
rs968631160 1554 dbSNP
rs1022721527 1560 dbSNP
rs1333859588 1561 dbSNP
rs1010884385 1567 dbSNP
rs1288798318 1568 dbSNP
rs889881769 1573 dbSNP
rs1333885205 1578 dbSNP
rs1231747715 1583 dbSNP
rs1018711230 1591 dbSNP
rs1336622132 1594 dbSNP
rs1195259657 1599 dbSNP
rs1009867192 1600 dbSNP
rs955709572 1610 dbSNP
rs1389696223 1626 dbSNP
rs1370043964 1627 dbSNP
rs1257337477 1633 dbSNP
rs1474398549 1634 dbSNP
rs1162356307 1638 dbSNP
rs1369799428 1639 dbSNP
rs764207986 1642 dbSNP
rs1304211655 1652 dbSNP
rs1457988735 1666 dbSNP
rs1427182349 1671 dbSNP
rs764077335 1681 dbSNP
rs1166865396 1685 dbSNP
rs1393658286 1689 dbSNP
rs1033232560 1698 dbSNP
rs1000480322 1704 dbSNP
rs1354593235 1705 dbSNP
rs189344988 1715 dbSNP
rs536145761 1721 dbSNP
rs1365138129 1731 dbSNP
rs567204562 1735 dbSNP
rs184348674 1741 dbSNP
rs1344400553 1742 dbSNP
rs148006751 1743 dbSNP
rs1280165342 1751 dbSNP
rs142621337 1751 dbSNP
rs1484914562 1751 dbSNP
rs895866629 1751 dbSNP
rs1269062848 1755 dbSNP
rs1224616759 1757 dbSNP
rs1048551387 1766 dbSNP
rs948444833 1773 dbSNP
rs1169142883 1778 dbSNP
rs939998894 1782 dbSNP
rs915546810 1786 dbSNP
rs143472493 1791 dbSNP
rs1304423126 1798 dbSNP
rs1224093474 1800 dbSNP
rs1352603710 1801 dbSNP
rs752685634 1802 dbSNP
rs1237160387 1804 dbSNP
rs148878582 1806 dbSNP
rs1349944060 1807 dbSNP
rs938428331 1808 dbSNP
rs1229184205 1809 dbSNP
rs1303343587 1810 dbSNP
rs1346404318 1812 dbSNP
rs531357148 1814 dbSNP
rs182218783 1817 dbSNP
rs542456926 1821 dbSNP
rs977185891 1822 dbSNP
rs1257028187 1840 dbSNP
rs1485740096 1842 dbSNP
rs1364294297 1844 dbSNP
rs1204202565 1851 dbSNP
rs369565866 1859 dbSNP
rs1245745768 1868 dbSNP
rs1450824275 1877 dbSNP
rs867995870 1884 dbSNP
rs1188583626 1891 dbSNP
rs930614502 1893 dbSNP
rs1323513915 1901 dbSNP
rs969058175 1903 dbSNP
rs921752667 1906 dbSNP
rs1401596050 1908 dbSNP
rs1452710448 1925 dbSNP
rs1387607001 1935 dbSNP
rs1156445492 1938 dbSNP
rs974566071 1942 dbSNP
rs914467093 1947 dbSNP
rs375076212 1953 dbSNP
rs911619869 1961 dbSNP
rs1472096077 1964 dbSNP
rs573585807 1972 dbSNP
rs1221494159 1981 dbSNP
rs986439449 1982 dbSNP
rs954094779 1993 dbSNP
rs1028324470 1997 dbSNP
rs998304270 2000 dbSNP
rs1316703552 2002 dbSNP
rs1201011860 2007 dbSNP
rs759493403 2009 dbSNP
rs1479189152 2015 dbSNP
rs988572429 2034 dbSNP
rs1466010523 2041 dbSNP
rs955677347 2044 dbSNP
rs1032718944 2056 dbSNP
rs1000849097 2057 dbSNP
rs1268037462 2062 dbSNP
rs1216428450 2065 dbSNP
rs560046396 2068 dbSNP
rs1014402801 2070 dbSNP
rs540205831 2070 dbSNP
rs758642148 2070 dbSNP
rs773317539 2070 dbSNP
rs896004040 2076 dbSNP
rs796375051 2083 dbSNP
rs1004279498 2084 dbSNP
rs1438625054 2088 dbSNP
rs1294659527 2094 dbSNP
rs189279194 2098 dbSNP
rs888602399 2099 dbSNP
rs774986760 2111 dbSNP
rs1290637152 2112 dbSNP
rs764832239 2116 dbSNP
rs770796381 2118 dbSNP
rs762645245 2130 dbSNP
rs932649608 2131 dbSNP
rs1013584670 2135 dbSNP
rs557931352 2139 dbSNP
rs1319408025 2149 dbSNP
rs17501264 2152 dbSNP
rs1056692177 2157 dbSNP
rs867146913 2164 dbSNP
rs944494161 2169 dbSNP
rs1274715608 2176 dbSNP
rs575688444 2180 dbSNP
rs938438319 2181 dbSNP
rs769301289 2183 dbSNP
rs62454450 2189 dbSNP
rs1041546330 2190 dbSNP
rs34483842 2193 dbSNP
rs906331520 2200 dbSNP
rs947269419 2204 dbSNP
rs1375197729 2212 dbSNP
rs1353975203 2218 dbSNP
rs925702889 2226 dbSNP
rs536084271 2229 dbSNP
rs914371205 2237 dbSNP
rs986103257 2240 dbSNP
rs978412284 2247 dbSNP
rs780632224 2252 dbSNP
rs1351500384 2260 dbSNP
rs1354812525 2262 dbSNP
rs1292320604 2266 dbSNP
rs1376583024 2274 dbSNP
rs1229645751 2277 dbSNP
rs970147566 2285 dbSNP
rs1306405449 2289 dbSNP
rs921272134 2297 dbSNP
rs1202957346 2300 dbSNP
rs1276609807 2305 dbSNP
rs1483280144 2307 dbSNP
rs1186894502 2308 dbSNP
rs1235498009 2312 dbSNP
rs1467722949 2314 dbSNP
rs1023190109 2323 dbSNP
rs1418965789 2327 dbSNP
rs976708876 2328 dbSNP
rs1171038779 2329 dbSNP
rs960181448 2331 dbSNP
rs1434619907 2336 dbSNP
rs145546367 2339 dbSNP
rs1361255611 2347 dbSNP
rs1449852727 2364 dbSNP
rs965469733 2366 dbSNP
rs1015656509 2367 dbSNP
rs1476383752 2377 dbSNP
rs1004688266 2380 dbSNP
rs1299765388 2382 dbSNP
rs1192254437 2383 dbSNP
rs1210031201 2386 dbSNP
rs888502968 2391 dbSNP
rs371932131 2405 dbSNP
rs372389109 2416 dbSNP
rs952950996 2418 dbSNP
rs1447764669 2419 dbSNP
rs1190655179 2427 dbSNP
rs1390831840 2440 dbSNP
rs1454275897 2442 dbSNP
rs1027560985 2448 dbSNP
rs1171324014 2453 dbSNP
rs1013177404 2478 dbSNP
rs894691783 2480 dbSNP
rs1387397934 2481 dbSNP
rs1432410778 2487 dbSNP
rs996833877 2490 dbSNP
rs1365282550 2491 dbSNP
rs1056744471 2502 dbSNP
rs1272942291 2513 dbSNP
rs1215648335 2520 dbSNP
rs1346863690 2530 dbSNP
rs879382001 2534 dbSNP
rs1038937417 2536 dbSNP
rs534361953 2542 dbSNP
rs1210818287 2549 dbSNP
rs1248788321 2551 dbSNP
rs1002465599 2552 dbSNP
rs772296044 2561 dbSNP
rs547329713 2571 dbSNP
rs192009497 2577 dbSNP
rs1248925389 2583 dbSNP
rs1041491471 2584 dbSNP
rs1410170590 2589 dbSNP
rs947122488 2598 dbSNP
rs1052905702 2600 dbSNP
rs914444277 2609 dbSNP
rs1434764793 2610 dbSNP
rs1385666345 2612 dbSNP
rs1321539204 2616 dbSNP
rs1332705603 2624 dbSNP
rs925703564 2626 dbSNP
rs978934076 2630 dbSNP
rs1326801919 2639 dbSNP
rs948401562 2640 dbSNP
rs1268932926 2643 dbSNP
rs1355774333 2647 dbSNP
rs1208092121 2649 dbSNP
rs915587994 2652 dbSNP
rs993039535 2655 dbSNP
rs571223692 2664 dbSNP
rs1050649154 2669 dbSNP
rs960312179 2671 dbSNP
rs1183902633 2677 dbSNP
rs1412196997 2682 dbSNP
rs931919091 2685 dbSNP
rs1338222572 2697 dbSNP
rs1450096980 2700 dbSNP
rs746306335 2702 dbSNP
rs143505235 2703 dbSNP
rs1307278439 2706 dbSNP
rs141101323 2707 dbSNP
rs1340153007 2711 dbSNP
rs1242846271 2715 dbSNP
rs997367680 2721 dbSNP
rs1357123231 2723 dbSNP
rs1205088557 2725 dbSNP
rs908544081 2730 dbSNP
rs1167903920 2731 dbSNP
rs982923448 2736 dbSNP
rs1444949719 2737 dbSNP
rs1244747604 2738 dbSNP
rs952874054 2740 dbSNP
rs757818930 2751 dbSNP
rs1255877456 2754 dbSNP
rs749608922 2755 dbSNP
rs1019665914 2758 dbSNP
rs1184944007 2759 dbSNP
rs1369713223 2760 dbSNP
rs866546669 2763 dbSNP
rs17501257 2764 dbSNP
rs548748514 2775 dbSNP
rs1205265193 2777 dbSNP
rs1308455017 2794 dbSNP
rs1401225064 2796 dbSNP
rs529075875 2798 dbSNP
rs1003061000 2799 dbSNP
rs948517289 2800 dbSNP
rs1227707027 2801 dbSNP
rs559981762 2809 dbSNP
rs1345000339 2812 dbSNP
rs1206456864 2825 dbSNP
rs902896479 2828 dbSNP
rs76640950 2836 dbSNP
rs577913403 2837 dbSNP
rs143588972 2841 dbSNP
rs892836388 2842 dbSNP
rs983007280 2845 dbSNP
rs1187443799 2849 dbSNP
rs544314380 2853 dbSNP
rs1387756736 2860 dbSNP
rs952897115 2863 dbSNP
rs1169124726 2873 dbSNP
rs920110359 2874 dbSNP
rs975519929 2875 dbSNP
rs964509254 2879 dbSNP
rs767642146 2882 dbSNP
rs1050289666 2883 dbSNP
rs1318664342 2903 dbSNP
rs755126691 2905 dbSNP
rs901662193 2917 dbSNP
rs1292713161 2924 dbSNP
rs1031581154 2925 dbSNP
rs575671142 2926 dbSNP
rs1352269681 2934 dbSNP
rs940582845 2937 dbSNP
rs555918570 2939 dbSNP
rs1207711633 2949 dbSNP
rs751749606 2953 dbSNP
rs1431957388 2964 dbSNP
rs983151848 2967 dbSNP
rs1465811995 2973 dbSNP
rs1187040405 2979 dbSNP
rs187493518 2981 dbSNP
rs919977740 2982 dbSNP
rs1456976007 2988 dbSNP
rs562435054 2988 dbSNP
rs938319018 2990 dbSNP
rs958888971 2999 dbSNP
rs1293483732 3013 dbSNP
rs1178010782 3016 dbSNP
rs1389003547 3017 dbSNP
rs1328897417 3019 dbSNP
rs1035817127 3022 dbSNP
rs1265775399 3026 dbSNP
rs553654155 3035 dbSNP
rs981693273 3036 dbSNP
rs3735532 3040 dbSNP
rs1019950645 3041 dbSNP
rs1011633360 3045 dbSNP
rs17472427 3046 dbSNP
rs772862896 3054 dbSNP
rs1401484151 3055 dbSNP
rs1490670027 3060 dbSNP
rs1348203911 3066 dbSNP
rs920098177 3067 dbSNP
rs1304218121 3071 dbSNP
rs1191485598 3080 dbSNP
rs1408342088 3107 dbSNP
rs1286092758 3122 dbSNP
rs995926410 3126 dbSNP
rs1352000575 3133 dbSNP
rs901713104 3134 dbSNP
rs1223962754 3138 dbSNP
rs1311472280 3143 dbSNP
rs1294360689 3145 dbSNP
rs975948394 3148 dbSNP
rs1220668905 3155 dbSNP
rs1482619402 3157 dbSNP
rs1202825107 3166 dbSNP
rs1040199095 3167 dbSNP
rs1470675348 3172 dbSNP
rs1181487630 3193 dbSNP
rs964263566 3200 dbSNP
rs940592573 3201 dbSNP
rs749310582 3204 dbSNP
rs1425559736 3213 dbSNP
rs1164804791 3214 dbSNP
rs748837488 3216 dbSNP
rs1370429704 3226 dbSNP
rs769148255 3240 dbSNP
rs571100476 3243 dbSNP
rs566993708 3250 dbSNP
rs1491281338 3253 dbSNP
rs1491455457 3254 dbSNP
rs17472420 3257 dbSNP
rs1301831971 3258 dbSNP
rs765103803 3266 dbSNP
rs919920151 3274 dbSNP
rs1031048744 3275 dbSNP
rs1055845740 3289 dbSNP
rs547687408 3291 dbSNP
rs373985831 3293 dbSNP
rs1226082665 3296 dbSNP
rs568587452 3299 dbSNP
rs1367329650 3303 dbSNP
rs183865912 3305 dbSNP
rs1235900732 3307 dbSNP
rs1484288935 3310 dbSNP
rs17472413 3320 dbSNP
rs761333233 3323 dbSNP
rs967619784 3324 dbSNP
rs913444021 3330 dbSNP
rs1171018352 3331 dbSNP
rs990401312 3333 dbSNP
rs545837882 3334 dbSNP
rs1028652560 3344 dbSNP
rs1357118796 3347 dbSNP
rs1454219902 3349 dbSNP
rs1336897866 3353 dbSNP
rs1160099769 3354 dbSNP
rs1363816462 3359 dbSNP
rs1021543667 3361 dbSNP
rs370288540 3365 dbSNP
rs566333835 3367 dbSNP
rs546526263 3374 dbSNP
rs965747766 3375 dbSNP
rs375578042 3382 dbSNP
rs1018809811 3383 dbSNP
rs1056794152 3384 dbSNP
rs1463554757 3394 dbSNP
rs1191060220 3402 dbSNP
rs1243150930 3404 dbSNP
rs1477975414 3405 dbSNP
rs1004690152 3407 dbSNP
rs1427691513 3420 dbSNP
rs886260944 3424 dbSNP
rs1480821716 3428 dbSNP
rs1049474486 3429 dbSNP
rs994763654 3435 dbSNP
rs1320237130 3437 dbSNP
rs898523254 3437 dbSNP
rs1327007107 3438 dbSNP
rs1435638109 3438 dbSNP
rs776269730 3439 dbSNP
rs1488319712 3445 dbSNP
rs1224371171 3446 dbSNP
rs564251138 3458 dbSNP
rs1267671066 3462 dbSNP
rs1327191513 3465 dbSNP
rs77759227 3472 dbSNP
rs554075981 3478 dbSNP
rs928699122 3484 dbSNP
rs1045886573 3485 dbSNP
rs1480927501 3494 dbSNP
rs946233342 3499 dbSNP
rs551358354 3500 dbSNP
rs913380351 3500 dbSNP
rs866352776 3505 dbSNP
rs912760225 3506 dbSNP
rs1326694553 3507 dbSNP
rs990844408 3516 dbSNP
rs957611552 3517 dbSNP
rs986881708 3520 dbSNP
rs935439128 3521 dbSNP
rs1267139243 3527 dbSNP
rs1404753113 3528 dbSNP
rs1321444897 3529 dbSNP
rs1367215932 3532 dbSNP
rs142853716 3533 dbSNP
rs1346867728 3534 dbSNP
rs1348905706 3536 dbSNP
rs979800143 3543 dbSNP
rs974385195 3545 dbSNP
rs1355656237 3550 dbSNP
rs1362387747 3552 dbSNP
rs1208579806 3554 dbSNP
rs1294531160 3565 dbSNP
rs1490623300 3568 dbSNP
rs1204959893 3579 dbSNP
rs746506748 3580 dbSNP
rs868454819 3585 dbSNP
rs1018735405 3601 dbSNP
rs17471618 3616 dbSNP
rs1021931081 3626 dbSNP
rs1161424488 3630 dbSNP
rs1387064736 3634 dbSNP
rs991448792 3635 dbSNP
rs1307254744 3639 dbSNP
rs1368454815 3640 dbSNP
rs17472406 3641 dbSNP
rs1329705596 3642 dbSNP
rs542344092 3649 dbSNP
rs1470311152 3658 dbSNP
rs1339974723 3663 dbSNP
rs950648626 3669 dbSNP
rs144773991 3674 dbSNP
rs1002570235 3676 dbSNP
rs1273008310 3679 dbSNP
rs1025411261 3681 dbSNP
rs780310063 3681 dbSNP
rs886824898 3681 dbSNP
rs1441356970 3683 dbSNP
rs1181259772 3688 dbSNP
rs1386553183 3689 dbSNP
rs143349939 3691 dbSNP
rs1262837520 3692 dbSNP
rs1188615616 3696 dbSNP
rs756354442 3699 dbSNP
rs775046143 3702 dbSNP
rs1168733982 3704 dbSNP
rs995169193 3709 dbSNP
rs546117744 3710 dbSNP
rs771308550 3711 dbSNP
rs1383603085 3720 dbSNP
rs1055740728 3733 dbSNP
rs1435033878 3734 dbSNP
rs1295962846 3735 dbSNP
rs1309666085 3748 dbSNP
rs1228551877 3756 dbSNP
rs1001459584 3762 dbSNP
rs1255738057 3766 dbSNP
rs907197858 3769 dbSNP
rs17437565 3771 dbSNP
rs1051233780 3779 dbSNP
rs1246972934 3779 dbSNP
rs1187883687 3791 dbSNP
rs1203912713 3791 dbSNP
rs935491344 3792 dbSNP
rs1193688597 3795 dbSNP
rs557394556 3797 dbSNP
rs1376855801 3817 dbSNP
rs946148620 3825 dbSNP
rs1325067168 3826 dbSNP
rs1406931176 3828 dbSNP
rs139339011 3835 dbSNP
rs1459606619 3835 dbSNP
rs923995718 3835 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 3209.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000222753.4 | 3UTR | UAAUAUUAAUUGUUAAUAAAAUAGUCACUGCCAUUAAAAUCUGCAGAAAAUACUCUUUACUUUCCUAUGCUAAAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
134 hsa-miR-4477a Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055843 PLEKHA1 pleckstrin homology domain containing A1 2 10
MIRT061259 AMOTL1 angiomotin like 1 2 4
MIRT071895 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT076933 MLLT6 MLLT6, PHD finger containing 2 2
MIRT078652 ICT1 mitochondrial ribosomal protein L58 2 2
MIRT083633 PRNP prion protein 2 2
MIRT091629 RPL15 ribosomal protein L15 2 4
MIRT107076 PPP6C protein phosphatase 6 catalytic subunit 2 2
MIRT111191 TRIM33 tripartite motif containing 33 2 2
MIRT114515 ARF6 ADP ribosylation factor 6 2 2
MIRT175250 PSAT1 phosphoserine aminotransferase 1 2 4
MIRT175430 ACSL4 acyl-CoA synthetase long chain family member 4 2 2
MIRT178687 FAM102B family with sequence similarity 102 member B 2 2
MIRT189771 CDADC1 cytidine and dCMP deaminase domain containing 1 2 2
MIRT229450 RPL10 ribosomal protein L10 2 2
MIRT244899 PHF6 PHD finger protein 6 2 2
MIRT249189 AKIRIN1 akirin 1 2 8
MIRT261134 TRIM8 tripartite motif containing 8 2 2
MIRT275561 ZIC5 Zic family member 5 2 4
MIRT275652 ABHD13 abhydrolase domain containing 13 2 2
MIRT288082 UTP18 UTP18, small subunit processome component 2 2
MIRT303605 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT307924 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT316787 FOXC1 forkhead box C1 2 2
MIRT326910 SCML2 Scm polycomb group protein like 2 2 2
MIRT327713 SPIN4 spindlin family member 4 2 2
MIRT331632 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2 2
MIRT342506 TMOD3 tropomodulin 3 2 4
MIRT354470 LRRC58 leucine rich repeat containing 58 2 2
MIRT378711 TRIM24 tripartite motif containing 24 2 2
MIRT407462 YDJC YdjC chitooligosaccharide deacetylase homolog 2 2
MIRT408226 SMAD5 SMAD family member 5 2 4
MIRT441824 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT442783 CHD8 chromodomain helicase DNA binding protein 8 2 2
MIRT443184 NHS NHS actin remodeling regulator 2 4
MIRT447615 CUL3 cullin 3 2 2
MIRT450156 DSEL dermatan sulfate epimerase-like 2 2
MIRT454801 NEDD9 neural precursor cell expressed, developmentally down-regulated 9 2 2
MIRT463050 ZNF644 zinc finger protein 644 2 2
MIRT467400 SOCS3 suppressor of cytokine signaling 3 2 2
MIRT468174 SGMS1 sphingomyelin synthase 1 2 2
MIRT468949 RPS14 ribosomal protein S14 2 6
MIRT469835 R3HDM4 R3H domain containing 4 2 2
MIRT470724 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT470902 PLIN3 perilipin 3 2 2
MIRT472467 NAPG NSF attachment protein gamma 2 12
MIRT472602 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 2
MIRT492350 SEMA7A semaphorin 7A (John Milton Hagen blood group) 2 2
MIRT493840 FOXN3 forkhead box N3 2 4
MIRT496318 DOCK9 dedicator of cytokinesis 9 2 2
MIRT500159 CLEC2D C-type lectin domain family 2 member D 2 8
MIRT500535 XPO4 exportin 4 2 4
MIRT503916 FBXL13 F-box and leucine rich repeat protein 13 2 4
MIRT504003 SAT1 spermidine/spermine N1-acetyltransferase 1 2 4
MIRT505647 SHMT1 serine hydroxymethyltransferase 1 2 4
MIRT506574 MIER3 MIER family member 3 2 4
MIRT506945 HS3ST3B1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 2 4
MIRT508196 RPS19 ribosomal protein S19 2 6
MIRT511417 HSPA13 heat shock protein family A (Hsp70) member 13 2 4
MIRT512326 ACTB actin beta 2 4
MIRT515376 RPL7 ribosomal protein L7 2 2
MIRT520422 TUBG1 tubulin gamma 1 2 4
MIRT524844 ARPP19 cAMP regulated phosphoprotein 19 2 2
MIRT526320 UGT2A1 UDP glucuronosyltransferase family 2 member A1 complex locus 2 2
MIRT526561 UGT2A2 UDP glucuronosyltransferase family 2 member A2 2 2
MIRT528027 FEZ2 fasciculation and elongation protein zeta 2 2 2
MIRT529874 RBM43 RNA binding motif protein 43 2 2
MIRT530826 CLEC4D C-type lectin domain family 4 member D 2 2
MIRT531334 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT532068 CCNB1 cyclin B1 2 4
MIRT532870 ZNF566 zinc finger protein 566 2 2
MIRT535580 NUP35 nucleoporin 35 2 2
MIRT537644 ERGIC2 ERGIC and golgi 2 2 4
MIRT537725 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT538894 BRI3BP BRI3 binding protein 2 2
MIRT538945 BMP2K BMP2 inducible kinase 2 2
MIRT540703 PDPK1 3-phosphoinositide dependent protein kinase 1 2 4
MIRT543210 TMEM117 transmembrane protein 117 2 3
MIRT543357 LYRM2 LYR motif containing 2 2 2
MIRT544905 CLSPN claspin 2 2
MIRT545532 ARF3 ADP ribosylation factor 3 2 2
MIRT546446 SMOC1 SPARC related modular calcium binding 1 2 2
MIRT546882 PURB purine rich element binding protein B 2 4
MIRT547440 MED13 mediator complex subunit 13 2 2
MIRT548027 GOLIM4 golgi integral membrane protein 4 2 2
MIRT548673 CRNKL1 crooked neck pre-mRNA splicing factor 1 2 2
MIRT550435 LLGL2 LLGL2, scribble cell polarity complex component 2 2
MIRT551850 RPS3 ribosomal protein S3 2 2
MIRT556072 MRFAP1 Morf4 family associated protein 1 2 2
MIRT556554 LIMS1 LIM zinc finger domain containing 1 2 2
MIRT557132 HOXA13 homeobox A13 2 2
MIRT557875 FEM1B fem-1 homolog B 2 4
MIRT558146 ELK4 ELK4, ETS transcription factor 2 2
MIRT558862 CD2AP CD2 associated protein 2 2
MIRT558884 CCNE1 cyclin E1 2 4
MIRT558907 CBX5 chromobox 5 2 2
MIRT559175 BRAP BRCA1 associated protein 2 2
MIRT560860 GAL3ST3 galactose-3-O-sulfotransferase 3 2 2
MIRT561729 PPIF peptidylprolyl isomerase F 2 2
MIRT564024 CEBPB CCAAT/enhancer binding protein beta 2 2
MIRT564366 TRMT5 tRNA methyltransferase 5 2 2
MIRT564609 ZNF703 zinc finger protein 703 2 2
MIRT565494 AZF1 azoospermia factor 1 2 2
MIRT565577 SLC6A8 solute carrier family 6 member 8 2 2
MIRT566947 LEPROT leptin receptor overlapping transcript 2 2
MIRT567293 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 2 2
MIRT567308 HMGN2 high mobility group nucleosomal binding domain 2 2 2
MIRT568048 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT571807 PHF19 PHD finger protein 19 2 2
MIRT609234 RBM23 RNA binding motif protein 23 2 2
MIRT610328 SSX5 SSX family member 5 2 2
MIRT611428 UGT8 UDP glycosyltransferase 8 2 4
MIRT611709 SLFN13 schlafen family member 13 2 2
MIRT612069 CEP135 centrosomal protein 135 2 4
MIRT617676 JRKL JRK like 2 2
MIRT623684 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT635634 PRR15L proline rich 15 like 2 2
MIRT636422 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT637011 GPATCH11 G-patch domain containing 11 2 2
MIRT644150 C4orf3 chromosome 4 open reading frame 3 2 2
MIRT648562 MEMO1 mediator of cell motility 1 2 2
MIRT650752 WNT16 Wnt family member 16 2 2
MIRT651914 UEVLD UEV and lactate/malate dehyrogenase domains 2 2
MIRT653556 SLC38A7 solute carrier family 38 member 7 2 2
MIRT692277 XRN2 5'-3' exoribonuclease 2 2 2
MIRT697650 WNK1 WNK lysine deficient protein kinase 1 2 2
MIRT703876 ERCC6 ERCC excision repair 6, chromatin remodeling factor 2 2
MIRT704615 CLIP1 CAP-Gly domain containing linker protein 1 2 2
MIRT708562 BBOX1 gamma-butyrobetaine hydroxylase 1 2 2
MIRT709614 KBTBD6 kelch repeat and BTB domain containing 6 2 2
MIRT712955 SGCD sarcoglycan delta 2 2
MIRT713502 DCAF17 DDB1 and CUL4 associated factor 17 2 2
MIRT720239 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT724255 GLUD1 glutamate dehydrogenase 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4477a Imatinib 5291 NSC743414 approved sensitive High Gastrointestinal Stromal Tumor cell line (882R-NC, 882R-OE, 882R-KD)
hsa-miR-4477a Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-4477a Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)

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