miRTarBase - #MIRT560548


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pre-miRNA Information
pre-miRNA hsa-mir-4752   
Genomic Coordinates chr19: 54282109 - 54282180
Description Homo sapiens miR-4752 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4752
Sequence 10| UUGUGGAUCUCAAGGAUGUGCU |31
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1396679933 1 dbSNP
rs1387430085 16 dbSNP
rs1008027103 19 dbSNP
rs1351805459 21 dbSNP
Putative Targets

Gene Information
Gene Symbol SIGLEC14   
Synonyms -
Description sialic acid binding Ig like lectin 14
Transcript NM_001098612   
Expression
Putative miRNA Targets on SIGLEC14
3'UTR of SIGLEC14
(miRNA target sites are highlighted)		 
>SIGLEC14|NM_001098612|3'UTR
   1 GCCCCTCCCGCTCAAGACAGAACTGAGGTGTGGACACTTAGCCCTGTGGGACACATGCAGGACATCACTGTCAGCTTCTT
  81 TCTGGAAGCTCACATCCCACTGACTACCCCTCTTTTCCTTCCTGCCCCATACCCCTTCTACTTATTCCCCTCTGCTTGTG
 161 AGTCTTGCCCCACCACACCTGCATCCCCATCTGCACCCCATCCCCTCTCCACCTGCCCTTCTCTTCCCTCTCCATCCACC
 241 ATCTCCAGCCCTGTGAAGGGAATGTACTTTCGGTCTTATACCCCCATTACCCATTACCCAAAAGTTACCTTTTTTTTTTT
 321 TTTTTTTTTTTGAGACAGAGTCTCACTCTGTTGCACAGGCTGGAGTTCAGTGGCACAATCTCCGTTCACTGCAACCTCCA
 401 CCTCTGGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGATTACAGGTGCCTGCCACCACATCCAGTTAA
 481 TTTTTTTTTTTTGTATGTTAGTAGAGATGGGGTTTTACCATGTTGGCCAGGTCTCGAACTCCTGACCTCAAGCAATCCAC
 561 TGCATTGGCCTCCCAAAGTGCTGGCATTACAGGTATGAGCCACCGTGCCTGGCTGCCAAAAGTTACCTTCTTAACACTTG
 641 AATTTCTGGTCTCCTCAGCTTCCCTATCCATATAGGCACAGAGAGGCAGCATTTGTTTTCCAGTTAAAACTCTACCTCAT
 721 TGTGATTATTATCCAATACAATTGTTACAAAATAAGTAAAACTTTTATGAAACAATACAACATAACTGATTTTACTCTTT
 801 AA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ucGU-GUAGGAACUCUAGGUGUu 5'
            || | ||| |   |||||:| 
Target 5' ctCAGCTTCCCT---ATCCATAt 3'
 654 - 673 133.00 -9.60
2 
miRNA  3' ucGUGUAGGAACUC--UAGGUGuu 5'
            | :: |||  ||  ||||||  
Target 5' ctCCTGACCTCAAGCAATCCACtg 3'
 539 - 562 130.00 -10.10
3 
miRNA  3' ucGUGUA-GGAACUCUAGGUGuu 5'
            | | | |||    ||||||  
Target 5' ttCTCTTCCCTCTCCATCCACca 3'
 219 - 241 124.00 -8.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30542755 7 COSMIC
COSN30111605 13 COSMIC
COSN30186791 23 COSMIC
COSN30186787 27 COSMIC
COSN30506451 44 COSMIC
COSN30463945 48 COSMIC
COSN30532921 57 COSMIC
COSN30532900 58 COSMIC
COSN26994724 76 COSMIC
COSN30179065 92 COSMIC
COSN30102277 112 COSMIC
COSN30452928 117 COSMIC
COSN31573782 125 COSMIC
COSN26994723 136 COSMIC
COSN30516843 160 COSMIC
COSN31499929 173 COSMIC
COSN30468442 203 COSMIC
COSN8975260 348 COSMIC
COSN8975259 654 COSMIC
COSN15752541 861 COSMIC
COSN1770872 1080 COSMIC
COSN18883231 1174 COSMIC
COSN20315729 1351 COSMIC
COSN15927243 1498 COSMIC
COSN6669393 1549 COSMIC
COSN5439070 1561 COSMIC
COSN1770870 1636 COSMIC
COSN9851883 1780 COSMIC
COSN7448495 1972 COSMIC
COSN30222010 2282 COSMIC
COSN7448494 2312 COSMIC
COSN8261758 2370 COSMIC
COSN29252031 2610 COSMIC
COSN7448493 2652 COSMIC
COSN21397021 2909 COSMIC
COSN22186835 3780 COSMIC
rs11669500 2036 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs761694035 1 dbSNP
rs753757565 3 dbSNP
rs764221159 9 dbSNP
rs760791932 10 dbSNP
rs1289749073 12 dbSNP
rs775585276 19 dbSNP
rs772267477 20 dbSNP
rs111686961 23 dbSNP
rs543200162 27 dbSNP
rs79437661 28 dbSNP
rs749851708 34 dbSNP
rs1470696425 35 dbSNP
rs113866743 36 dbSNP
rs746471525 42 dbSNP
rs774560605 51 dbSNP
rs779579864 51 dbSNP
rs1303227736 55 dbSNP
rs1366963691 58 dbSNP
rs1407885520 60 dbSNP
rs1485838441 63 dbSNP
rs1444034961 66 dbSNP
rs1282213330 72 dbSNP
rs1354497818 74 dbSNP
rs1245589838 78 dbSNP
rs1292558322 83 dbSNP
rs941791094 90 dbSNP
rs1203152458 107 dbSNP
rs1250377131 108 dbSNP
rs1438916643 109 dbSNP
rs1278207792 111 dbSNP
rs1184342914 118 dbSNP
rs1199010905 132 dbSNP
rs1443619103 133 dbSNP
rs11667561 138 dbSNP
rs1361642470 141 dbSNP
rs1341734849 155 dbSNP
rs1386739143 168 dbSNP
rs1270890500 170 dbSNP
rs545151755 176 dbSNP
rs1218064661 185 dbSNP
rs1167430470 186 dbSNP
rs1397035978 189 dbSNP
rs12985646 191 dbSNP
rs1411652710 199 dbSNP
rs1331932100 211 dbSNP
rs1339704508 221 dbSNP
rs1452152907 221 dbSNP
rs1339122136 223 dbSNP
rs768746246 226 dbSNP
rs56384907 228 dbSNP
rs1415783007 234 dbSNP
rs1226205934 238 dbSNP
rs1250835525 240 dbSNP
rs1340184240 248 dbSNP
rs1332594083 257 dbSNP
rs150296754 271 dbSNP
rs1184615510 272 dbSNP
rs1244537599 279 dbSNP
rs1447287009 280 dbSNP
rs534116516 281 dbSNP
rs1191834469 282 dbSNP
rs749417996 284 dbSNP
rs1476337234 291 dbSNP
rs1170785656 293 dbSNP
rs1401451147 294 dbSNP
rs1470082802 298 dbSNP
rs1170798360 300 dbSNP
rs1464613121 301 dbSNP
rs1338476951 305 dbSNP
rs1421397240 307 dbSNP
rs1189908251 308 dbSNP
rs1475488843 309 dbSNP
rs910202310 310 dbSNP
rs1236755333 321 dbSNP
rs1185108024 325 dbSNP
rs1439830781 327 dbSNP
rs1273913605 331 dbSNP
rs1168513777 332 dbSNP
rs1202220328 332 dbSNP
rs1204633422 332 dbSNP
rs1230223316 332 dbSNP
rs1265456709 332 dbSNP
rs1294927484 332 dbSNP
rs1323468950 332 dbSNP
rs1327152797 332 dbSNP
rs1463256364 332 dbSNP
rs1491144222 332 dbSNP
rs55916485 332 dbSNP
rs72311910 332 dbSNP
rs1288555106 333 dbSNP
rs1385974305 333 dbSNP
rs1409274510 333 dbSNP
rs1451868472 333 dbSNP
rs1491486575 333 dbSNP
rs1198120070 334 dbSNP
rs1321674342 334 dbSNP
rs1419661815 334 dbSNP
rs1224721620 336 dbSNP
rs1345430347 336 dbSNP
rs1285555071 342 dbSNP
rs1327570911 343 dbSNP
rs1316069685 355 dbSNP
rs1238817852 378 dbSNP
rs207477247 383 dbSNP
rs11667433 384 dbSNP
rs1207488726 391 dbSNP
rs1234499582 409 dbSNP
rs1267644436 416 dbSNP
rs1490489454 423 dbSNP
rs554556941 424 dbSNP
rs1249310560 426 dbSNP
rs1418249524 430 dbSNP
rs1159578390 433 dbSNP
rs985834189 439 dbSNP
rs1455600008 441 dbSNP
rs373228616 443 dbSNP
rs1365087810 444 dbSNP
rs1406056309 450 dbSNP
rs190781197 460 dbSNP
rs7251832 472 dbSNP
rs1318349182 473 dbSNP
rs1331529592 485 dbSNP
rs1224114582 493 dbSNP
rs1359587407 493 dbSNP
rs879605234 493 dbSNP
rs1445421875 494 dbSNP
rs1397575494 495 dbSNP
rs1166465305 497 dbSNP
rs1252471400 499 dbSNP
rs1405928432 504 dbSNP
rs187289397 520 dbSNP
rs1161263720 522 dbSNP
rs1425323782 529 dbSNP
rs1165565406 530 dbSNP
rs1353200674 531 dbSNP
rs151158884 535 dbSNP
rs1299088258 547 dbSNP
rs1376052615 555 dbSNP
rs770397435 568 dbSNP
rs1178195755 569 dbSNP
rs1383105306 570 dbSNP
rs1456600165 578 dbSNP
rs1306830884 580 dbSNP
rs771474675 582 dbSNP
rs749721110 584 dbSNP
rs58440217 599 dbSNP
rs1482130421 600 dbSNP
rs143082216 604 dbSNP
rs1445474851 608 dbSNP
rs1185496472 612 dbSNP
rs140650838 626 dbSNP
rs1353143973 656 dbSNP
rs1321696300 657 dbSNP
rs1288305124 662 dbSNP
rs1225837635 667 dbSNP
rs146852935 690 dbSNP
rs746202719 695 dbSNP
rs571240345 703 dbSNP
rs954759997 710 dbSNP
rs1406348124 719 dbSNP
rs1308973324 731 dbSNP
rs377304312 733 dbSNP
rs1267869526 742 dbSNP
rs1374164068 743 dbSNP
rs1015529176 749 dbSNP
rs923221699 774 dbSNP
rs1214677760 775 dbSNP
rs550788297 779 dbSNP
rs967182530 781 dbSNP
rs532188678 783 dbSNP
rs1436516949 805 dbSNP
rs1349253978 823 dbSNP
rs1321427623 834 dbSNP
rs1202726299 839 dbSNP
rs1263603272 847 dbSNP
rs1461932526 850 dbSNP
rs200047526 850 dbSNP
rs35991997 850 dbSNP
rs1187212318 851 dbSNP
rs1422202435 854 dbSNP
rs1479779420 854 dbSNP
rs1402244205 855 dbSNP
rs531839585 861 dbSNP
rs1380741774 868 dbSNP
rs1430485883 888 dbSNP
rs546231924 890 dbSNP
rs1315741681 906 dbSNP
rs1344261366 915 dbSNP
rs1430747236 933 dbSNP
rs1005352635 947 dbSNP
rs1343561805 950 dbSNP
rs528804146 961 dbSNP
rs1283660361 968 dbSNP
rs1325476610 984 dbSNP
rs1397094507 985 dbSNP
rs1049164285 998 dbSNP
rs1282367229 1003 dbSNP
rs1316571475 1014 dbSNP
rs755557944 1015 dbSNP
rs1012359310 1016 dbSNP
rs747841108 1031 dbSNP
rs1056447662 1044 dbSNP
rs1199374774 1055 dbSNP
rs780822390 1060 dbSNP
rs924162771 1061 dbSNP
rs562997132 1062 dbSNP
rs34197373 1073 dbSNP
rs543339098 1074 dbSNP
rs531159259 1076 dbSNP
rs182342985 1083 dbSNP
rs748282496 1083 dbSNP
rs10405990 1084 dbSNP
rs985595482 1090 dbSNP
rs1303649746 1099 dbSNP
rs62106882 1112 dbSNP
rs578013076 1115 dbSNP
rs1278747653 1116 dbSNP
rs1439682347 1116 dbSNP
rs922357046 1117 dbSNP
rs781627765 1124 dbSNP
rs1219305032 1125 dbSNP
rs976410486 1131 dbSNP
rs1366215933 1134 dbSNP
rs1002223027 1135 dbSNP
rs1357318199 1136 dbSNP
rs961032351 1139 dbSNP
rs1272556258 1147 dbSNP
rs553337564 1149 dbSNP
rs541028097 1160 dbSNP
rs368810720 1161 dbSNP
rs78659043 1162 dbSNP
rs1232725372 1190 dbSNP
rs1417577622 1204 dbSNP
rs952513522 1210 dbSNP
rs993788087 1215 dbSNP
rs897986142 1220 dbSNP
rs1377506351 1229 dbSNP
rs560951667 1236 dbSNP
rs1423406745 1240 dbSNP
rs1176985079 1242 dbSNP
rs1163684383 1244 dbSNP
rs143837538 1251 dbSNP
rs779645053 1257 dbSNP
rs1327912395 1259 dbSNP
rs1013184838 1276 dbSNP
rs62106881 1277 dbSNP
rs55682160 1286 dbSNP
rs1478464363 1290 dbSNP
rs1380871940 1310 dbSNP
rs1037898644 1311 dbSNP
rs1359064153 1316 dbSNP
rs1194641727 1317 dbSNP
rs1003508337 1329 dbSNP
rs1214953349 1336 dbSNP
rs902561796 1344 dbSNP
rs1200943328 1348 dbSNP
rs1183668263 1368 dbSNP
rs1369743263 1368 dbSNP
rs1443639666 1368 dbSNP
rs1474366301 1368 dbSNP
rs546657013 1368 dbSNP
rs552676535 1368 dbSNP
rs55955102 1368 dbSNP
rs77349711 1368 dbSNP
rs1167214492 1379 dbSNP
rs1411390120 1382 dbSNP
rs751373208 1391 dbSNP
rs1334450548 1400 dbSNP
rs1282034769 1402 dbSNP
rs1210453548 1407 dbSNP
rs1404176045 1412 dbSNP
rs199896595 1412 dbSNP
rs397932688 1412 dbSNP
rs56218527 1412 dbSNP
rs539830066 1413 dbSNP
rs1270080725 1425 dbSNP
rs1220778073 1426 dbSNP
rs752864957 1426 dbSNP
rs1469906081 1430 dbSNP
rs1261737756 1431 dbSNP
rs1042606704 1434 dbSNP
rs1203948180 1439 dbSNP
rs1257869014 1441 dbSNP
rs946993988 1460 dbSNP
rs1215788827 1463 dbSNP
rs1341076674 1464 dbSNP
rs1277440507 1470 dbSNP
rs894079660 1471 dbSNP
rs112159347 1472 dbSNP
rs1428399660 1477 dbSNP
rs1337591753 1478 dbSNP
rs1404649807 1481 dbSNP
rs932819676 1493 dbSNP
rs190994485 1499 dbSNP
rs1465768102 1508 dbSNP
rs7247844 1510 dbSNP
rs117016974 1514 dbSNP
rs1327529460 1516 dbSNP
rs116470803 1519 dbSNP
rs908238723 1522 dbSNP
rs984022441 1525 dbSNP
rs1323221367 1528 dbSNP
rs1192051573 1531 dbSNP
rs910318471 1532 dbSNP
rs952585683 1534 dbSNP
rs567247353 1544 dbSNP
rs1204031633 1549 dbSNP
rs1261888067 1565 dbSNP
rs1257378353 1566 dbSNP
rs140169470 1567 dbSNP
rs531197606 1572 dbSNP
rs960148369 1573 dbSNP
rs922970304 1574 dbSNP
rs758381140 1575 dbSNP
rs1004070106 1579 dbSNP
rs1451985644 1581 dbSNP
rs914386763 1586 dbSNP
rs750302222 1591 dbSNP
rs368308290 1592 dbSNP
rs185793344 1596 dbSNP
rs538820897 1600 dbSNP
rs1216794987 1602 dbSNP
rs551635863 1624 dbSNP
rs533480149 1628 dbSNP
rs1313227619 1635 dbSNP
rs1303953532 1644 dbSNP
rs1395192220 1646 dbSNP
rs1377288770 1647 dbSNP
rs1033775300 1651 dbSNP
rs764271065 1655 dbSNP
rs894025871 1665 dbSNP
rs1260771946 1669 dbSNP
rs1355178677 1674 dbSNP
rs1219647527 1681 dbSNP
rs559633585 1684 dbSNP
rs1447623775 1686 dbSNP
rs1399717434 1692 dbSNP
rs541126419 1702 dbSNP
rs1168614583 1704 dbSNP
rs1192707082 1713 dbSNP
rs1463509407 1727 dbSNP
rs1002572536 1730 dbSNP
rs1050432938 1731 dbSNP
rs1181305480 1736 dbSNP
rs1381171970 1744 dbSNP
rs1421527216 1749 dbSNP
rs1437720936 1750 dbSNP
rs1161752343 1763 dbSNP
rs1365501313 1766 dbSNP
rs1458915751 1768 dbSNP
rs149980248 1769 dbSNP
rs901370086 1770 dbSNP
rs1040784229 1774 dbSNP
rs939778466 1786 dbSNP
rs1164543277 1790 dbSNP
rs908312537 1793 dbSNP
rs760832507 1795 dbSNP
rs1422392120 1806 dbSNP
rs983761115 1828 dbSNP
rs930975419 1829 dbSNP
rs1223745868 1834 dbSNP
rs1025428159 1858 dbSNP
rs1480157237 1866 dbSNP
rs915792063 1867 dbSNP
rs993733507 1879 dbSNP
rs1238947882 1886 dbSNP
rs1441846087 1897 dbSNP
rs898099043 1900 dbSNP
rs753026382 1901 dbSNP
rs1424874324 1908 dbSNP
rs1167480589 1909 dbSNP
rs1371874114 1920 dbSNP
rs991854557 1923 dbSNP
rs959892301 1927 dbSNP
rs139257388 1932 dbSNP
rs1332465899 1937 dbSNP
rs1402022295 1951 dbSNP
rs1035956463 1957 dbSNP
rs767863502 1969 dbSNP
rs977242978 1971 dbSNP
rs759764085 1972 dbSNP
rs888824518 1981 dbSNP
rs774811505 1988 dbSNP
rs1050180425 1990 dbSNP
rs1196187936 2004 dbSNP
rs1021001545 2010 dbSNP
rs561710622 2011 dbSNP
rs1259816081 2020 dbSNP
rs542532737 2021 dbSNP
rs1265922797 2030 dbSNP
rs958317187 2032 dbSNP
rs1028564361 2035 dbSNP
rs11669500 2036 dbSNP
rs1311161336 2038 dbSNP
rs1041387695 2039 dbSNP
rs901325467 2047 dbSNP
rs1018044317 2079 dbSNP
rs1183685389 2080 dbSNP
rs1417913578 2081 dbSNP
rs35055944 2084 dbSNP
rs180855930 2088 dbSNP
rs914502548 2099 dbSNP
rs1004399331 2103 dbSNP
rs868228409 2105 dbSNP
rs1426301337 2114 dbSNP
rs1467877156 2115 dbSNP
rs886825633 2123 dbSNP
rs538496905 2124 dbSNP
rs188442557 2125 dbSNP
rs1361167192 2149 dbSNP
rs763565655 2151 dbSNP
rs1400589143 2158 dbSNP
rs930964465 2159 dbSNP
rs1321099673 2160 dbSNP
rs1365982339 2168 dbSNP
rs1278110169 2171 dbSNP
rs1159599133 2180 dbSNP
rs1439977424 2184 dbSNP
rs1379256599 2185 dbSNP
rs1176278241 2186 dbSNP
rs1240492888 2191 dbSNP
rs2167420 2197 dbSNP
rs1195089993 2210 dbSNP
rs1266018568 2216 dbSNP
rs1479626169 2220 dbSNP
rs778762389 2224 dbSNP
rs937176436 2225 dbSNP
rs1055703691 2231 dbSNP
rs1425423863 2245 dbSNP
rs879328100 2250 dbSNP
rs1156283838 2252 dbSNP
rs1344129723 2290 dbSNP
rs938574409 2293 dbSNP
rs534693816 2305 dbSNP
rs184039217 2311 dbSNP
rs977190446 2312 dbSNP
rs1217037050 2328 dbSNP
rs1221204531 2356 dbSNP
rs967185736 2359 dbSNP
rs913984807 2360 dbSNP
rs1217448239 2363 dbSNP
rs989556727 2363 dbSNP
rs1331694501 2365 dbSNP
rs866972012 2370 dbSNP
rs181482935 2371 dbSNP
rs971247390 2371 dbSNP
rs980870378 2371 dbSNP
rs1406819721 2376 dbSNP
rs1024953690 2380 dbSNP
rs1159937219 2380 dbSNP
rs996879281 2385 dbSNP
rs150838592 2386 dbSNP
rs545446226 2389 dbSNP
rs1387752144 2390 dbSNP
rs1351448633 2392 dbSNP
rs1299218716 2393 dbSNP
rs1419442813 2396 dbSNP
rs1277958068 2399 dbSNP
rs1376439593 2402 dbSNP
rs1240954977 2405 dbSNP
rs1311626652 2408 dbSNP
rs1357894473 2411 dbSNP
rs1209809818 2423 dbSNP
rs570216132 2424 dbSNP
rs189046164 2425 dbSNP
rs1202880053 2426 dbSNP
rs141480110 2436 dbSNP
rs1031549199 2438 dbSNP
rs1457988168 2444 dbSNP
rs538894330 2448 dbSNP
rs11883097 2449 dbSNP
rs1197508881 2451 dbSNP
rs904333529 2454 dbSNP
rs1431413998 2455 dbSNP
rs1265183148 2472 dbSNP
rs747645421 2477 dbSNP
rs1194154580 2480 dbSNP
rs779846100 2493 dbSNP
rs780626058 2509 dbSNP
rs938367296 2510 dbSNP
rs1333410546 2518 dbSNP
rs11883114 2519 dbSNP
rs114661837 2520 dbSNP
rs768324960 2521 dbSNP
rs945873536 2523 dbSNP
rs1359082984 2530 dbSNP
rs746590976 2533 dbSNP
rs1257886981 2538 dbSNP
rs1279320351 2538 dbSNP
rs989503032 2540 dbSNP
rs958342309 2553 dbSNP
rs533807702 2556 dbSNP
rs1240924435 2565 dbSNP
rs1399799121 2575 dbSNP
rs1441290330 2578 dbSNP
rs1239123703 2580 dbSNP
rs2122894 2582 dbSNP
rs1424119452 2597 dbSNP
rs1006517489 2609 dbSNP
rs576375761 2610 dbSNP
rs563480824 2611 dbSNP
rs1395459930 2613 dbSNP
rs185663113 2638 dbSNP
rs965412103 2643 dbSNP
rs889283840 2651 dbSNP
rs1019876679 2652 dbSNP
rs983067122 2653 dbSNP
rs1220876044 2677 dbSNP
rs1260805633 2690 dbSNP
rs779943954 2691 dbSNP
rs1343932271 2704 dbSNP
rs193138629 2705 dbSNP
rs1171227906 2710 dbSNP
rs750440806 2712 dbSNP
rs577795212 2730 dbSNP
rs189084353 2735 dbSNP
rs1263841661 2740 dbSNP
rs1260814543 2747 dbSNP
rs1197018745 2753 dbSNP
rs1189334504 2770 dbSNP
rs1443239253 2774 dbSNP
rs78196455 2783 dbSNP
rs997256118 2786 dbSNP
rs1399062031 2798 dbSNP
rs1320023965 2817 dbSNP
rs184117235 2845 dbSNP
rs1341698569 2860 dbSNP
rs549384860 2876 dbSNP
rs1258784704 2887 dbSNP
rs906910086 2898 dbSNP
rs114135043 2904 dbSNP
rs901605931 2906 dbSNP
rs1233568125 2909 dbSNP
rs573732070 2914 dbSNP
rs1347859716 2915 dbSNP
rs1215273474 2918 dbSNP
rs191495821 2921 dbSNP
rs1489268693 2924 dbSNP
rs1286371526 2931 dbSNP
rs945723415 2941 dbSNP
rs893071151 2947 dbSNP
rs75898095 2965 dbSNP
rs1379612660 2968 dbSNP
rs1437847143 2969 dbSNP
rs143678003 2970 dbSNP
rs1054295362 2977 dbSNP
rs1361714219 2980 dbSNP
rs778702176 2981 dbSNP
rs757200568 2983 dbSNP
rs1449852828 2990 dbSNP
rs1401918668 3003 dbSNP
rs1331397632 3009 dbSNP
rs866756280 3014 dbSNP
rs1390413066 3031 dbSNP
rs937288826 3045 dbSNP
rs1302877696 3049 dbSNP
rs1333626544 3052 dbSNP
rs1465083780 3054 dbSNP
rs1421329367 3059 dbSNP
rs138197262 3060 dbSNP
rs1243736738 3061 dbSNP
rs921310165 3065 dbSNP
rs975564868 3068 dbSNP
rs1472964309 3074 dbSNP
rs944030012 3078 dbSNP
rs76083662 3079 dbSNP
rs143608387 3085 dbSNP
rs951580522 3087 dbSNP
rs547537259 3088 dbSNP
rs1027248382 3089 dbSNP
rs918016164 3097 dbSNP
rs972021398 3104 dbSNP
rs1368407109 3120 dbSNP
rs1458682087 3123 dbSNP
rs962036726 3124 dbSNP
rs1016308084 3126 dbSNP
rs1445633760 3127 dbSNP
rs1456844234 3127 dbSNP
rs985029536 3127 dbSNP
rs767331112 3131 dbSNP
rs1378410057 3132 dbSNP
rs1292598999 3139 dbSNP
rs796493887 3139 dbSNP
rs1311832681 3147 dbSNP
rs1322267125 3162 dbSNP
rs761974080 3162 dbSNP
rs1246694812 3167 dbSNP
rs202010613 3174 dbSNP
rs953782104 3174 dbSNP
rs1198197000 3181 dbSNP
rs1029138488 3184 dbSNP
rs1229256306 3187 dbSNP
rs974606669 3196 dbSNP
rs1180208704 3199 dbSNP
rs187111684 3200 dbSNP
rs114702172 3202 dbSNP
rs1424966729 3203 dbSNP
rs1167308837 3204 dbSNP
rs1421991231 3208 dbSNP
rs1034503976 3222 dbSNP
rs79668479 3230 dbSNP
rs906857686 3231 dbSNP
rs1445095115 3241 dbSNP
rs1378626630 3242 dbSNP
rs1301811110 3243 dbSNP
rs560032642 3245 dbSNP
rs564489648 3246 dbSNP
rs1276257066 3254 dbSNP
rs541626907 3256 dbSNP
rs764339284 3266 dbSNP
rs1009978441 3272 dbSNP
rs541667761 3277 dbSNP
rs1325375837 3292 dbSNP
rs374509841 3302 dbSNP
rs1208106290 3308 dbSNP
rs892793669 3313 dbSNP
rs1405865440 3330 dbSNP
rs1483852015 3333 dbSNP
rs1184057120 3334 dbSNP
rs544991351 3338 dbSNP
rs1389826372 3343 dbSNP
rs533227065 3373 dbSNP
rs1054383454 3378 dbSNP
rs1054077154 3388 dbSNP
rs937254267 3395 dbSNP
rs931806898 3396 dbSNP
rs900368833 3399 dbSNP
rs1441832606 3407 dbSNP
rs1040181396 3413 dbSNP
rs1381102100 3421 dbSNP
rs111855620 3422 dbSNP
rs1437836403 3455 dbSNP
rs1400368854 3468 dbSNP
rs1248979679 3469 dbSNP
rs1223021069 3476 dbSNP
rs912669788 3478 dbSNP
rs1217739732 3486 dbSNP
rs918462810 3498 dbSNP
rs1312805668 3500 dbSNP
rs982746480 3506 dbSNP
rs138396649 3509 dbSNP
rs1284427249 3511 dbSNP
rs1288230441 3528 dbSNP
rs1488281561 3528 dbSNP
rs766808470 3532 dbSNP
rs1265839097 3533 dbSNP
rs1219184604 3535 dbSNP
rs929963783 3542 dbSNP
rs562943995 3547 dbSNP
rs1190235894 3549 dbSNP
rs1355446690 3551 dbSNP
rs534634605 3560 dbSNP
rs920171121 3560 dbSNP
rs1238804595 3567 dbSNP
rs974384085 3576 dbSNP
rs1299785668 3578 dbSNP
rs959112058 3578 dbSNP
rs1347852683 3581 dbSNP
rs1370610357 3582 dbSNP
rs1276098763 3583 dbSNP
rs940784769 3590 dbSNP
rs1368588355 3597 dbSNP
rs1437151851 3614 dbSNP
rs1330432996 3618 dbSNP
rs1307254275 3624 dbSNP
rs927506448 3633 dbSNP
rs982033124 3637 dbSNP
rs1241561152 3643 dbSNP
rs971090057 3650 dbSNP
rs1450169962 3657 dbSNP
rs1020002190 3659 dbSNP
rs909196253 3664 dbSNP
rs1158217458 3665 dbSNP
rs1489297420 3668 dbSNP
rs1399164014 3671 dbSNP
rs1379207909 3673 dbSNP
rs1439797172 3684 dbSNP
rs1160342904 3691 dbSNP
rs762935772 3695 dbSNP
rs1009821732 3702 dbSNP
rs957075931 3710 dbSNP
rs1165286450 3711 dbSNP
rs1033337168 3713 dbSNP
rs1478001263 3719 dbSNP
rs1376206155 3720 dbSNP
rs1447621616 3730 dbSNP
rs1281725441 3732 dbSNP
rs554348989 3745 dbSNP
rs1228104746 3747 dbSNP
rs1196303579 3749 dbSNP
rs12973490 3754 dbSNP
rs1040184021 3757 dbSNP
rs1215525678 3758 dbSNP
rs1183369771 3763 dbSNP
rs1235650026 3765 dbSNP
rs1008750136 3772 dbSNP
rs773832152 3773 dbSNP
rs1415749834 3775 dbSNP
rs555550846 3779 dbSNP
rs1009926703 3786 dbSNP
rs1399859632 3792 dbSNP
rs929952439 3793 dbSNP
rs1466198312 3797 dbSNP
rs150105779 3806 dbSNP
rs1039006222 3807 dbSNP
rs1448006142 3812 dbSNP
rs937582910 3833 dbSNP
rs1357713673 3836 dbSNP
rs575990872 3837 dbSNP
rs905742473 3841 dbSNP
rs1401634157 3856 dbSNP
rs1340960445 3864 dbSNP
rs1297352199 3870 dbSNP
rs927546773 3875 dbSNP
rs981602391 3876 dbSNP
rs762244371 3877 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545217. RNA binding protein: AGO2. Condition:miR-7 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ucguguaggaacucuAGGUGuu 5'
                         |||||  
Target 5' aucgccacacugucuUCCAC-- 3'
 		2 - 21
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545217
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-7 transfection
Location of target site ENST00000360844.6 | 3UTR | AAUCGCCACACUGUCUUCCAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
57 hsa-miR-4752 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT291951 TPM4 tropomyosin 4 2 2
MIRT293610 PVR poliovirus receptor 2 2
MIRT454768 STOML3 stomatin like 3 2 2
MIRT463215 ZNF131 zinc finger protein 131 2 2
MIRT464138 VPS28 VPS28, ESCRT-I subunit 2 2
MIRT469361 REST RE1 silencing transcription factor 2 6
MIRT470819 PLXND1 plexin D1 2 2
MIRT478874 CREBRF CREB3 regulatory factor 2 2
MIRT480240 C8orf58 chromosome 8 open reading frame 58 2 2
MIRT480544 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT480923 BCAT1 branched chain amino acid transaminase 1 2 4
MIRT497342 RPP25L ribonuclease P/MRP subunit p25 like 2 2
MIRT498823 DNTTIP2 deoxynucleotidyltransferase terminal interacting protein 2 2 8
MIRT498927 TMEM106B transmembrane protein 106B 2 8
MIRT499583 INTU inturned planar cell polarity protein 2 4
MIRT500117 ZNF106 zinc finger protein 106 2 4
MIRT500473 ZC3H11A zinc finger CCCH-type containing 11A 2 2
MIRT501907 MBD4 methyl-CpG binding domain 4, DNA glycosylase 2 4
MIRT519636 ZNF772 zinc finger protein 772 2 4
MIRT533402 TXLNG taxilin gamma 2 2
MIRT546181 TPRG1L tumor protein p63 regulated 1 like 2 2
MIRT546486 SKI SKI proto-oncogene 2 4
MIRT549398 AKAP11 A-kinase anchoring protein 11 2 2
MIRT552282 CBY1 chibby family member 1, beta catenin antagonist 2 4
MIRT558980 CA8 carbonic anhydrase 8 2 2
MIRT559812 ZNF83 zinc finger protein 83 2 2
MIRT559923 SOD2 superoxide dismutase 2 2 2
MIRT560257 TMEM236 transmembrane protein 236 2 2
MIRT560419 ANGPTL3 angiopoietin like 3 2 2
MIRT560548 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT560803 PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 2 2
MIRT560882 SULT1B1 sulfotransferase family 1B member 1 2 2
MIRT560996 C8orf37 chromosome 8 open reading frame 37 2 2
MIRT561089 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT561192 LDHD lactate dehydrogenase D 2 2
MIRT561834 NREP neuronal regeneration related protein 2 2
MIRT561997 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT562394 EIF4E eukaryotic translation initiation factor 4E 2 2
MIRT566265 PTAR1 protein prenyltransferase alpha subunit repeat containing 1 2 2
MIRT572724 NUP188 nucleoporin 188 2 2
MIRT620359 CD55 CD55 molecule (Cromer blood group) 2 2
MIRT623578 IREB2 iron responsive element binding protein 2 2 2
MIRT627122 GRN granulin precursor 2 2
MIRT640725 PHF13 PHD finger protein 13 2 2
MIRT651578 WDR26 WD repeat domain 26 2 2
MIRT655000 PLAG1 PLAG1 zinc finger 2 2
MIRT659673 CD86 CD86 molecule 2 2
MIRT667164 NRXN1 neurexin 1 2 2
MIRT674926 C1orf116 chromosome 1 open reading frame 116 2 2
MIRT687377 NT5DC3 5'-nucleotidase domain containing 3 2 2
MIRT690438 REPIN1 replication initiator 1 2 2
MIRT695288 TK1 thymidine kinase 1 2 2
MIRT699809 SDHD succinate dehydrogenase complex subunit D 2 2
MIRT710100 HEY2 hes related family bHLH transcription factor with YRPW motif 2 2 2
MIRT717882 GBP4 guanylate binding protein 4 2 2
MIRT719957 SAMD15 sterile alpha motif domain containing 15 2 2
MIRT725588 CDH7 cadherin 7 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4752 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-4752 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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