pre-miRNA Information
pre-miRNA hsa-mir-605   
Genomic Coordinates chr10: 51299573 - 51299655
Synonyms MIRN605, hsa-mir-605, MIR605
Description Homo sapiens miR-605 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-605-3p
Sequence 51| AGAAGGCACUAUGAGAUUUAGA |72
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 10 + 51299626 27587585, 28550310, 26028588, 26449202, 26487287, 29165639 MiREDiBase
A-to-I 14 10 + 51299636 29233923 MiREDiBase
A-to-I 20 10 + 51299642 18684997, 26449202, 27587585, 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs759219082 5 dbSNP
rs1491224174 9 dbSNP
rs746611214 10 dbSNP
rs367648737 11 dbSNP
rs1359467239 14 dbSNP
rs1442565019 16 dbSNP
Putative Targets

Gene Information
Gene Symbol MRPL49   
Synonyms C11orf4, L49mt, MRP-L49, NOF, NOF1
Description mitochondrial ribosomal protein L49
Transcript NM_004927   
Expression
Putative miRNA Targets on MRPL49
3'UTR of MRPL49
(miRNA target sites are highlighted)
>MRPL49|NM_004927|3'UTR
   1 GGCCCAGCCGAGCAGCCTGCTTGTCAGCATGCCCTGTGGATCAAGTCTAGGGGGCCTCAGGAGGAGGGAGGTGGGTGTTG
  81 GAGCCCCTGAGACAGGGGATACAGAAACTAGGGCTAAAGGACTTTGGGGTCAGGCCTTGCTTGCATAAAGGAGAAAACAA
 161 CTCTATGTACATGCTGGGGGAGAGTGCCTAATGTGGGAGACCAAATAGGGATCACCAGGCTAATGGGGGGCGTCAGCAGC
 241 TTTCTCTCCCTCCTATCTTGGCCTGTTCTTTTTTGTTTTTTGAGACGGAGTCTCACTCTGTTGCCCAGGGTGGAGTGCAG
 321 TGGCATGATCTTGGCTCACTGCAACTTCCACCTCTGGGATCAAGGGATTCTCCTGCCTCAGCCTCTTGAGTAGCTGGGAT
 401 TACAGGCGCCCACCACCACAGCCTGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTC
 481 TCAAACTCCTGACTCGAAGTGATCCGCCCACCTTGGCCTCCCAAAGCGTTGGGATTATAGGCATGAGCCATGTGCCTGGT
 561 CCACCTTGGCCTGTTTTGTTTTTCTTTCCTTGGGCTCAGCAATTCAAATTCTAGTTGTTATTTGGTGGAAGCAGTAGCCC
 641 AACCCCAGTTTAGGGGAAGGTAGCACAGGGCAGAGCCACTGGGCACTTTGTTTCCTTGGCCCTCCGAAGCTCACTGTTGC
 721 AAATACCCCCAAGCCTTTGCTCTAGGCCAGATCTTGTTTGGTGCAGGTGATGGAGAACACAGATGACTCGGGCATGGGTC
 801 TTGGAGATCTTCTGTTCAAAGTACAGTGCTGGCACTGGGGCACAGAGTGCCCACGTTAGCCCCGGGCTCTGATAGAGAGG
 881 TAGGAGGCACGTTCTTGGTCACTGTTCCATTGCAGACCAGACTTGCTGGCCTGACCACAAGGGAGTGGCTGGGAACTCAC
 961 AGCCAGCATAGGGACATCCCCCTGCAGCCTTCTGACCTGCAATCAAGGCTGGGGAGGGGTTTGCAGGCAGGAATATGCTG
1041 ACCTTTCACCCTGCCATCCCATCCCAACCCCAGCTCACTAGCCTTCATATATGCCTTATACTTGGAGTCACAGGGGCCAA
1121 AGGCCTGAGACCCCACCCTGCCCCCAAACTGGCTAAGACAGCTTTCAGTTCCTGACTCCCCAACTTGGTCTCTGCCCTGA
1201 AGCAGGGCACTGAACTCTGGGCTGCTTCTCTGTGTGTAAAATGGGCACATCTTCCTAATCTGTTAATGGTCAGTGGTGTC
1281 CCCAAGGATAGTGCTGGCTTCCATGGAAACCCTCACTCCTGGAGATTCCATTCCATTTTCAAGTGTACAGCCACAGCAAG
1361 GAGCCCGACACTGATTTGATCGATTCTGTGACACAAACCCCACCAATTGTTAATGCAAGTTTTTATTTGGCTGTATATAC
1441 AATTTAAGCTATTAAAATTTGTACAATATTTACAAATTAAATAATCATCTGAAACTGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agAUUUAGAGUAU-CACGGAAga 5'
            ||:  :|||||  ||||||  
Target 5' acTAGCCTTCATATATGCCTTat 3'
1077 - 1099 140.00 -14.40
2
miRNA  3' agauuuagaguaucaCGGAAGa 5'
                         |||||| 
Target 5' ggacatccccctgcaGCCTTCt 3'
972 - 993 120.00 -9.40
3
miRNA  3' agauuuAGAGUAUCACGGAAGa 5'
                |:|||   |||| || 
Target 5' ctgaccTTTCACCCTGCCATCc 3'
1038 - 1059 120.00 -7.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN15322966 22 COSMIC
COSN31483183 48 COSMIC
COSN31483176 59 COSMIC
COSN30147816 82 COSMIC
COSN20077507 84 COSMIC
COSN30516300 92 COSMIC
COSN30171895 96 COSMIC
COSN30500096 108 COSMIC
COSN23013458 210 COSMIC
COSN16169251 703 COSMIC
COSN15900796 872 COSMIC
COSN1136258 940 COSMIC
COSN32009586 1047 COSMIC
COSN30625426 1165 COSMIC
COSN5916687 1168 COSMIC
COSN30626266 1413 COSMIC
COSN5263059 1445 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs372514469 6 dbSNP
rs746069599 8 dbSNP
rs770003687 10 dbSNP
rs774071487 11 dbSNP
rs1317645378 14 dbSNP
rs1227503235 18 dbSNP
rs546104642 20 dbSNP
rs11546366 22 dbSNP
rs1291737819 24 dbSNP
rs773102511 28 dbSNP
rs1232510884 32 dbSNP
rs1288776394 33 dbSNP
rs908691130 36 dbSNP
rs760716072 37 dbSNP
rs765793910 39 dbSNP
rs986778911 41 dbSNP
rs776273296 42 dbSNP
rs1334671544 48 dbSNP
rs759045972 48 dbSNP
rs1212534428 51 dbSNP
rs1408569395 54 dbSNP
rs1372912404 55 dbSNP
rs1255329318 60 dbSNP
rs1405129278 73 dbSNP
rs1486499127 74 dbSNP
rs1165226865 75 dbSNP
rs1473215780 78 dbSNP
rs747275320 94 dbSNP
rs528670269 95 dbSNP
rs912674966 97 dbSNP
rs1426333218 116 dbSNP
rs1049689943 123 dbSNP
rs879241035 154 dbSNP
rs893827810 155 dbSNP
rs1465132166 157 dbSNP
rs1311522506 166 dbSNP
rs964151562 173 dbSNP
rs369194358 174 dbSNP
rs35527840 176 dbSNP
rs771034801 179 dbSNP
rs1229672722 181 dbSNP
rs914725282 181 dbSNP
rs774177889 187 dbSNP
rs756009213 190 dbSNP
rs1436306218 191 dbSNP
rs548363587 206 dbSNP
rs1348515178 208 dbSNP
rs1325888288 218 dbSNP
rs1406207433 220 dbSNP
rs1483123460 221 dbSNP
rs903005805 222 dbSNP
rs998726326 225 dbSNP
rs1170844235 226 dbSNP
rs1384089820 227 dbSNP
rs1412708714 228 dbSNP
rs1190561467 229 dbSNP
rs567860548 232 dbSNP
rs947654318 233 dbSNP
rs1199266690 235 dbSNP
rs1464197837 237 dbSNP
rs959909526 249 dbSNP
rs1210124814 253 dbSNP
rs1311610088 256 dbSNP
rs1329242033 263 dbSNP
rs991416571 266 dbSNP
rs1041983053 267 dbSNP
rs1023029418 269 dbSNP
rs1277017089 274 dbSNP
rs1442075028 276 dbSNP
rs1364813059 282 dbSNP
rs530498276 287 dbSNP
rs952435898 288 dbSNP
rs1349962874 292 dbSNP
rs1175396972 295 dbSNP
rs111788090 296 dbSNP
rs1427151326 297 dbSNP
rs1173004172 299 dbSNP
rs1262171205 299 dbSNP
rs1484781744 303 dbSNP
rs1448637728 307 dbSNP
rs1245896083 317 dbSNP
rs570365819 318 dbSNP
rs767517915 326 dbSNP
rs1190126869 330 dbSNP
rs1465031920 333 dbSNP
rs908326604 334 dbSNP
rs1207379521 338 dbSNP
rs1187861185 342 dbSNP
rs7935441 345 dbSNP
rs760245408 346 dbSNP
rs1295793044 349 dbSNP
rs3209975 360 dbSNP
rs896232793 361 dbSNP
rs922788209 363 dbSNP
rs1302383289 367 dbSNP
rs779863171 370 dbSNP
rs1360890274 384 dbSNP
rs1174192236 401 dbSNP
rs932882867 403 dbSNP
rs1011958644 408 dbSNP
rs1170207198 409 dbSNP
rs1050035352 410 dbSNP
rs185215869 411 dbSNP
rs1435861884 414 dbSNP
rs898301999 416 dbSNP
rs566736024 424 dbSNP
rs1343763412 427 dbSNP
rs902558883 430 dbSNP
rs1025589203 436 dbSNP
rs1035495102 437 dbSNP
rs951271578 445 dbSNP
rs534085731 454 dbSNP
rs1312274266 455 dbSNP
rs1226756460 457 dbSNP
rs1381449066 458 dbSNP
rs1367159214 463 dbSNP
rs1409171268 465 dbSNP
rs1368600820 470 dbSNP
rs1309678399 472 dbSNP
rs1008264292 474 dbSNP
rs1019575514 475 dbSNP
rs191944048 488 dbSNP
rs1162268756 491 dbSNP
rs1428648833 496 dbSNP
rs975495488 497 dbSNP
rs555600161 506 dbSNP
rs968882889 507 dbSNP
rs1207821928 519 dbSNP
rs1481166870 527 dbSNP
rs574905559 528 dbSNP
rs373445544 529 dbSNP
rs1323691367 530 dbSNP
rs376512103 539 dbSNP
rs764534038 551 dbSNP
rs983764190 555 dbSNP
rs1191402121 556 dbSNP
rs751994526 560 dbSNP
rs1391834387 562 dbSNP
rs1056535165 566 dbSNP
rs1454359974 574 dbSNP
rs1178495468 575 dbSNP
rs147106311 577 dbSNP
rs11546364 583 dbSNP
rs917566763 586 dbSNP
rs1157848867 589 dbSNP
rs961081501 594 dbSNP
rs947807704 596 dbSNP
rs757666700 599 dbSNP
rs1160288972 614 dbSNP
rs1184618035 617 dbSNP
rs1420154612 618 dbSNP
rs1267145167 622 dbSNP
rs1349707562 623 dbSNP
rs781726699 624 dbSNP
rs377417233 635 dbSNP
rs1328197531 636 dbSNP
rs1395253949 640 dbSNP
rs1274029541 645 dbSNP
rs1208265104 650 dbSNP
rs898228171 656 dbSNP
rs922753761 660 dbSNP
rs1239715017 661 dbSNP
rs1330415392 662 dbSNP
rs954237954 664 dbSNP
rs1446131435 672 dbSNP
rs745654202 706 dbSNP
rs111359194 707 dbSNP
rs1319476074 730 dbSNP
rs1225460208 732 dbSNP
rs1432367099 733 dbSNP
rs1390232708 741 dbSNP
rs1307401743 742 dbSNP
rs887029927 748 dbSNP
rs1158600749 751 dbSNP
rs1008124246 754 dbSNP
rs1377540410 764 dbSNP
rs1174474313 772 dbSNP
rs946963793 773 dbSNP
rs1253954504 784 dbSNP
rs780177596 784 dbSNP
rs547161597 790 dbSNP
rs775573536 791 dbSNP
rs545750118 796 dbSNP
rs564410027 799 dbSNP
rs1230747316 804 dbSNP
rs112641426 807 dbSNP
rs1365828513 808 dbSNP
rs1178338978 809 dbSNP
rs549793772 811 dbSNP
rs1296535252 812 dbSNP
rs1225764306 815 dbSNP
rs1366879230 825 dbSNP
rs138551663 826 dbSNP
rs895639578 842 dbSNP
rs1012791181 844 dbSNP
rs1437067533 846 dbSNP
rs1396096376 847 dbSNP
rs1031761916 848 dbSNP
rs1168314720 849 dbSNP
rs1447939388 852 dbSNP
rs960298883 855 dbSNP
rs562124395 856 dbSNP
rs888335714 864 dbSNP
rs1326929313 865 dbSNP
rs1212963202 866 dbSNP
rs1485935282 867 dbSNP
rs1005893173 868 dbSNP
rs1015235205 870 dbSNP
rs1356392297 871 dbSNP
rs961049993 872 dbSNP
rs531096907 873 dbSNP
rs1243533316 874 dbSNP
rs1338209599 874 dbSNP
rs550424396 876 dbSNP
rs1231241820 886 dbSNP
rs1294963508 890 dbSNP
rs980841358 892 dbSNP
rs1307867106 895 dbSNP
rs1335074308 901 dbSNP
rs1399001096 911 dbSNP
rs1168727868 913 dbSNP
rs1213674109 914 dbSNP
rs919705803 920 dbSNP
rs1439069543 927 dbSNP
rs1190118949 928 dbSNP
rs1475523234 931 dbSNP
rs985609774 934 dbSNP
rs1202846474 939 dbSNP
rs1205784743 941 dbSNP
rs1273379445 946 dbSNP
rs931014442 949 dbSNP
rs200761581 955 dbSNP
rs1353777304 966 dbSNP
rs1274553740 977 dbSNP
rs1046951756 980 dbSNP
rs1484860498 981 dbSNP
rs1233345562 982 dbSNP
rs1190496879 983 dbSNP
rs1288274022 988 dbSNP
rs886913685 996 dbSNP
rs1477599610 997 dbSNP
rs1329916669 1000 dbSNP
rs1405030179 1003 dbSNP
rs1388821890 1007 dbSNP
rs1167262718 1010 dbSNP
rs1179946133 1020 dbSNP
rs943858339 1020 dbSNP
rs923919776 1022 dbSNP
rs1166422087 1025 dbSNP
rs1421693911 1032 dbSNP
rs1040992535 1037 dbSNP
rs1197868545 1040 dbSNP
rs749487288 1043 dbSNP
rs1170990720 1044 dbSNP
rs939362650 1069 dbSNP
rs867336462 1074 dbSNP
rs1327877631 1077 dbSNP
rs1265641419 1081 dbSNP
rs1056559412 1088 dbSNP
rs1474688857 1089 dbSNP
rs1183294910 1096 dbSNP
rs564158936 1099 dbSNP
rs1353429986 1101 dbSNP
rs1280877698 1103 dbSNP
rs1469003442 1104 dbSNP
rs1158558091 1105 dbSNP
rs1232733252 1112 dbSNP
rs916627664 1114 dbSNP
rs1416282900 1115 dbSNP
rs1311270439 1117 dbSNP
rs1375026452 1118 dbSNP
rs576985484 1122 dbSNP
rs1410705405 1123 dbSNP
rs1308339502 1124 dbSNP
rs1337368063 1125 dbSNP
rs1236784073 1127 dbSNP
rs1278923832 1130 dbSNP
rs753065318 1143 dbSNP
rs1235789431 1145 dbSNP
rs532801612 1148 dbSNP
rs1044207963 1152 dbSNP
rs1485101313 1155 dbSNP
rs1170973623 1158 dbSNP
rs1205442874 1159 dbSNP
rs888294137 1160 dbSNP
rs1253933324 1167 dbSNP
rs142025613 1168 dbSNP
rs1181686625 1178 dbSNP
rs1378771956 1180 dbSNP
rs182600209 1181 dbSNP
rs1171806952 1183 dbSNP
rs751992660 1184 dbSNP
rs1247906714 1193 dbSNP
rs1430625821 1198 dbSNP
rs1395127296 1199 dbSNP
rs1285750051 1201 dbSNP
rs1310155638 1204 dbSNP
rs1217035344 1206 dbSNP
rs762944758 1207 dbSNP
rs1398321402 1212 dbSNP
rs1389506704 1214 dbSNP
rs1327961552 1216 dbSNP
rs1331568887 1226 dbSNP
rs768871663 1227 dbSNP
rs1236178813 1228 dbSNP
rs114303545 1231 dbSNP
rs1382023302 1233 dbSNP
rs186572747 1235 dbSNP
rs1031812585 1237 dbSNP
rs997848179 1238 dbSNP
rs1228677571 1239 dbSNP
rs1252746119 1247 dbSNP
rs1337832171 1248 dbSNP
rs747311936 1249 dbSNP
rs960264087 1249 dbSNP
rs1268537126 1251 dbSNP
rs1346965159 1257 dbSNP
rs993386339 1261 dbSNP
rs568974839 1264 dbSNP
rs538017644 1274 dbSNP
rs1358399337 1286 dbSNP
rs1475897896 1287 dbSNP
rs1190682122 1311 dbSNP
rs953764979 1319 dbSNP
rs1007066733 1320 dbSNP
rs1023253798 1332 dbSNP
rs1175466474 1344 dbSNP
rs1022438777 1345 dbSNP
rs1236292256 1350 dbSNP
rs968645155 1353 dbSNP
rs1485080041 1361 dbSNP
rs970704813 1362 dbSNP
rs15107 1365 dbSNP
rs376920196 1367 dbSNP
rs1339732497 1368 dbSNP
rs1399897796 1369 dbSNP
rs919551422 1372 dbSNP
rs150608811 1382 dbSNP
rs747975910 1383 dbSNP
rs1282397616 1384 dbSNP
rs539495724 1387 dbSNP
rs1414204608 1389 dbSNP
rs1376167783 1393 dbSNP
rs982558838 1395 dbSNP
rs1428068401 1400 dbSNP
rs1063426 1407 dbSNP
rs868302327 1417 dbSNP
rs1354234057 1443 dbSNP
rs768237803 1450 dbSNP
rs1368206403 1452 dbSNP
rs1430711911 1453 dbSNP
rs191933579 1460 dbSNP
rs1237079742 1478 dbSNP
rs899756705 1486 dbSNP
rs1257612197 1487 dbSNP
rs1189532911 1489 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' agauuuaGAGUAU-CACGGAAga 5'
                 :|||||  ||||||  
Target 5' -----ccUUCAUAUAUGCCUUau 3'
1 - 18
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000279242.2 | 3UTR | CCUUCAUAUAUGCCUUAUACUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
100 hsa-miR-605-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061339 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT061584 BTG2 BTG anti-proliferation factor 2 2 6
MIRT076140 WDR81 WD repeat domain 81 2 2
MIRT079361 CCDC137 coiled-coil domain containing 137 2 2
MIRT079547 VAMP3 vesicle associated membrane protein 3 2 2
MIRT096242 CANX calnexin 2 2
MIRT243877 G3BP1 G3BP stress granule assembly factor 1 2 4
MIRT249186 AKIRIN1 akirin 1 2 8
MIRT273604 SP1 Sp1 transcription factor 2 2
MIRT316766 FOXC1 forkhead box C1 2 4
MIRT322410 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT370117 TRIB3 tribbles pseudokinase 3 2 2
MIRT392725 UBN2 ubinuclein 2 2 2
MIRT406910 PTBP1 polypyrimidine tract binding protein 1 2 2
MIRT407440 CTDSP1 CTD small phosphatase 1 2 2
MIRT441887 RD3 retinal degeneration 3 2 4
MIRT444979 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT445241 FOXD4 forkhead box D4 2 2
MIRT445500 FOXD4L5 forkhead box D4 like 5 2 2
MIRT445503 FOXD4L4 forkhead box D4 like 4 2 2
MIRT447025 FOXD4L1 forkhead box D4 like 1 2 2
MIRT447743 TMCC3 transmembrane and coiled-coil domain family 3 2 2
MIRT448761 HDX highly divergent homeobox 2 2
MIRT450003 HAX1 HCLS1 associated protein X-1 2 2
MIRT452830 FAM131B family with sequence similarity 131 member B 2 2
MIRT452872 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT453506 ARRB1 arrestin beta 1 2 2
MIRT454169 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT458742 CES2 carboxylesterase 2 2 2
MIRT459166 HSPA6 heat shock protein family A (Hsp70) member 6 2 21
MIRT460246 IL17RB interleukin 17 receptor B 2 4
MIRT460514 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT460698 RNF157 ring finger protein 157 2 2
MIRT461481 METTL1 methyltransferase like 1 2 2
MIRT462617 C20orf27 chromosome 20 open reading frame 27 2 4
MIRT463233 ZNF131 zinc finger protein 131 2 2
MIRT465699 TNPO2 transportin 2 2 8
MIRT466304 TIMM22 translocase of inner mitochondrial membrane 22 2 2
MIRT468957 RPS14 ribosomal protein S14 2 6
MIRT469571 RARA retinoic acid receptor alpha 2 2
MIRT469685 RAB5B RAB5B, member RAS oncogene family 2 2
MIRT470800 PMP22 peripheral myelin protein 22 2 2
MIRT471649 PANK2 pantothenate kinase 2 2 4
MIRT471722 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 2 2
MIRT472281 NFIB nuclear factor I B 2 4
MIRT473680 MAPKBP1 mitogen-activated protein kinase binding protein 1 2 2
MIRT475859 H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase 2 2
MIRT477326 EPHA2 EPH receptor A2 2 2
MIRT477831 DYRK3 dual specificity tyrosine phosphorylation regulated kinase 3 2 2
MIRT478572 CTNND1 catenin delta 1 2 4
MIRT479634 CD81 CD81 molecule 2 2
MIRT481950 ANKRD11 ankyrin repeat domain 11 2 2
MIRT483696 ZNF74 zinc finger protein 74 2 6
MIRT488798 MALT1 MALT1 paracaspase 2 2
MIRT489066 STARD3 StAR related lipid transfer domain containing 3 2 2
MIRT492533 PSMD11 proteasome 26S subunit, non-ATPase 11 2 2
MIRT492857 NRARP NOTCH regulated ankyrin repeat protein 2 2
MIRT496793 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 2 2
MIRT500122 ZNF106 zinc finger protein 106 2 4
MIRT505359 TMEM167A transmembrane protein 167A 2 2
MIRT506786 KLHL15 kelch like family member 15 2 6
MIRT510692 SRM spermidine synthase 2 6
MIRT515841 CEP104 centrosomal protein 104 2 4
MIRT516448 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT528855 PKP1 plakophilin 1 2 2
MIRT533848 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT539025 ATXN7L1 ataxin 7 like 1 2 4
MIRT542872 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT546543 SATB2 SATB homeobox 2 2 2
MIRT554114 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT560569 ZNF460 zinc finger protein 460 2 2
MIRT560796 EPM2AIP1 EPM2A interacting protein 1 2 2
MIRT562836 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT563109 IFRD2 interferon related developmental regulator 2 2 2
MIRT564177 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT564283 ASB1 ankyrin repeat and SOCS box containing 1 2 2
MIRT564350 USP22 ubiquitin specific peptidase 22 2 2
MIRT565279 TNFRSF21 TNF receptor superfamily member 21 2 2
MIRT565338 TMEM104 transmembrane protein 104 2 2
MIRT565905 SCAMP2 secretory carrier membrane protein 2 2 2
MIRT567108 ITGB1 integrin subunit beta 1 2 2
MIRT567601 FANCF Fanconi anemia complementation group F 2 2
MIRT567779 DGAT2 diacylglycerol O-acyltransferase 2 2 2
MIRT568075 CENPQ centromere protein Q 2 2
MIRT624304 COL12A1 collagen type XII alpha 1 chain 2 2
MIRT644395 CDKL1 cyclin dependent kinase like 1 2 2
MIRT661547 ZNF674 zinc finger protein 674 2 4
MIRT670949 IRAK3 interleukin 1 receptor associated kinase 3 2 2
MIRT672951 AKAP5 A-kinase anchoring protein 5 2 2
MIRT697426 ZFP36 ZFP36 ring finger protein 2 2
MIRT700793 PIAS2 protein inhibitor of activated STAT 2 2 2
MIRT702657 ITGA3 integrin subunit alpha 3 2 2
MIRT708945 FZR1 fizzy and cell division cycle 20 related 1 2 2
MIRT713657 PLCE1 phospholipase C epsilon 1 2 2
MIRT719239 CYSLTR2 cysteinyl leukotriene receptor 2 2 2
MIRT719951 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT722048 HLA-E major histocompatibility complex, class I, E 2 2
MIRT722201 URM1 ubiquitin related modifier 1 2 2
MIRT724790 C1D C1D nuclear receptor corepressor 2 2
MIRT734347 CYP2B6 cytochrome P450 family 2 subfamily B member 6 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-605 Anthranilamide-pyrazolo[1,5-a]pyrimidine NULL NULL Quantitative real-time PCR neuroblastoma cells 23992861 2013 up-regualted
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-605 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-605 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-mir-605 Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-mir-605 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-605-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)

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