miRTarBase - #MIRT564193


—
pre-miRNA Information
pre-miRNA hsa-mir-190b   
Genomic Coordinates chr1: 154193665 - 154193743
Description Homo sapiens miR-190b stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-190b
Sequence 11| UGAUAUGUUUGAUAUUGGGUU |31
Evidence Not_experimental
Experiments
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PM20D2   
Synonyms ACY1L2
Description peptidase M20 domain containing 2
Transcript NM_001010853   
Expression
Putative miRNA Targets on PM20D2
3'UTR of PM20D2
(miRNA target sites are highlighted)		 
>PM20D2|NM_001010853|3'UTR
   1 AAGACTTAGGGGCCACTTATAAATCAAGAAGACGTGATGATTTTTTTCTTTTAATCTCTTTTAATGAAGGCATGCTTGTT
  81 TTTTAATCTTAAAGGAGTAAAATTCTTTTTACCTGATAAGTGAGGACAGGGTGTGGAGAAAACATATTAATTACCTCATA
 161 TCTAAAGTGAAAATTTTTGCAAATCCGTACTTGATAGGATTATGATATTACAGGAGCTGGTATGTGATGCCATTCTTTCT
 241 TTTTTTTTACCCCGCAACCACTCACCTTCACAGTAGTGATACCATTTCTTAACCTGGAGGATACATGGCATCATTTTTAT
 321 AAAATATGTTAGTAAACCTTTTTGTAAGCCTTAAATGTTATGTGTATTTTTAAAAGCTTAAGAGATTTCAAACCTTATAT
 401 TCAGAATTGACACCCATGAGAGTGTTTTGTGGTATAGGGTGGTAAACTTGTTCTCTAATCGTATATTAATTCCTCTACCA
 481 GATTGTATATTTGAAGCCAGTGTCTTTCCTTTTTTTGTTTTAAGATAGAGCCTCGCTCTGTTGCCCAGGCTGAAGTGTAG
 561 TGGCACAATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTACCAAGTAGCTGGGA
 641 TTACAGGTGTGTGGCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGCATTTCACCATGTTGGCCAGGCTGGT
 721 CTCGAACTCCTGACCTCAGGTGATGCACCTGCCTCGGCCTCCTAAAGTGCTGGGATTACAGGCATGAGCCACCGCACCCG
 801 GCCTGCCAGTGTCTTTTTAATACACATGTGTGTTGGTATTTTTAAATTGTTACAGTATCTAGCATATTGCTTACTCTGAA
 881 TATTCAGTACTTTTTGAATAAGCAAATATTGCTTCCTTGCTTGGAATCATCAGAGTTTAAAGTAGCTTCGTGGATGGACC
 961 ATGATCCTAAGATGAGTTTTAATTTTGTGTTTACAGTCATCTCTTGTACAACGTGGAGAAGAAAAGATATACTTACTACT
1041 TTGCTTCAGGTACACATAAGAAAACCTCTTTTTTAAAAAAATTTTTATTTTTTTACATAATAGAGACAGGGGCTCGCTGT
1121 AGCTTCCAGGCTGGCCTCAAACTCCTGGGCTCAAGCAATCCTCCTGTCTTGGCCTCCCAAAGTGTTGGGATTTCAGGTAT
1201 GAGACACCACACCTGCCCATTTTTGTTTGGTTTTTTAATGGGCAGGTTCTTGCTCTCCCAGGCTGGAGTGCAGTGGTGTA
1281 ATCACAGCTCACTGCAGTCTCGAACTCCTGGACTCAAGCAGTCCTCCCACCTCAGCCTCCTAAAGCACTGGGATTACAGG
1361 CTTGAGGCACTGCACCTGGCCCTGACCATTTTTTAAAAAGGTTAGGCTTAGTGCAAAGTTTAAAATTATATGATTCTTAA
1441 AATACTGAATTAGTTTCTAAACTAAACTAGAGGTATAGGTGGACCTGCTTGAGGTATCTTTGTTTTTATGGAACATTTTT
1521 ATTACATGCCTTTATAATTTTTCATTGTTCACACCCTGTACTGAAACCTTTTTCTCAAATACCAACTCTTGGCTATGTTA
1601 AATTTGTAGACTTTAAAAGATGTTATCTAAATTAATGGTTTAAATATACAAATTGAAAATATTTTCTTTTTAGTGGCAAT
1681 TTTAAAAGCAGGCCTTAATATGGGACCTGCTTTTAAAGTAAAATATGTGGTACTATGAATTACTAAATTGCTATATACCA
1761 TGTAATAGTGAGTATAGCTAATATTTAGTATGCCTTTTAAAAATTTTGGACTGCTTTTCGGTTTTAACAAATTCTCCACA
1841 TGTGAACTACTCAAGAAATTTTCCCTTTTTAATTGCCTCTATAGCACTCATAAGAGCTAGGGCATTAGGATAAACTAGAA
1921 TATTTTATGTTTATGAATACTTGTATAAACTTAAAAGTGTTTTGATTTCCCACAATTTCCCAAAGGAATGTTTATTTATT
2001 AAGAGTTGTGTTGATAATTTAACTGTTACAATTTCAGCAGTTGAATTCAGTGAACACTGGTTGAGGAGTGCCTATTTCTA
2081 AGCACTGGGTGTAAGAAGAAAAGACACTTGCAAAGGAAGAGCTAAGATTAACATAATTTCTTTGGTTTTTCTATTGCTTG
2161 TTATTATTATGTAAAAACTGGGTGGCAGTTCACAAGGAAGATTGTTGTAACAGAAGAGTGACAACCAATAGTTTTTTGAT
2241 CATTAAATCAAATTTTGTAAACAGTGGCAGGAGCGTGGACTTAAAACAAGGCTTGCTTATTTGGTTTTGTCAAAGTTTTA
2321 CGAAAATATATGATATATATTTATACTAAAACTATATAATCCTTAGATTTAGGAAAGCAATCAGTTAATGTCTTTAGCAC
2401 ACTAAAGCAGTATTAAACACAGGTACAAGTTGGAAATTGTAGAAAACTGAAAGAAAACAAGACAAAATGTCTATGGTAGG
2481 GAATAAAAGAGTTTAAGATATTATGTAAAATTATGTGTATTTTCTTCTCTTTTACATAAATTGTTTGTGAAAAGTGTGCT
2561 CAACTTTTTTACAAGAGTGATATTAACTTGGATTTATTTTTCAATATAATTTGGAGACCCTTTGTTATCCAAATAAAATT
2641 GATGAGTTTCTGTGCCTGTAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGACACTGTTGCATGCCCCAGAAAGCTTGTGG
2721 TGGGTGGTAAGTTCTCACGAGATTTATTTATCTGAGCAACATTGGGACTGAGGGAACATCTGAAAGCTACCATCTTGAAA
2801 ATTTTTGAGGAAGTGTTTCTGAAATATTTAAAAATACTTAAGTCAGTCATTTTGAACAAAAGAAATTGATACAATAAGTT
2881 TTTTTTTTTAAGGATGATTGTCTAATTTTGTAATATGTTGTTTTTTAAAAACCTGTCTGATGGTGTTTTATACATTTCTA
2961 ACTTTTTACCTGAGTTATCTCTTTAGTCTTTTGGAAAATACCCTACACAATACTAACCTTTAAAACTATCAAATTTTTGT
3041 TATAAGATAAATGTTATCTTTGTACTAGATAGCAACCCTTTATAAGGTTGTAAGGTATAATAAACTGCTTATTTTTTTAC
3121 ATACTTCATATCAAGCATTTTGCAGTCCAATTATATAGTTGAGGATGGTGTATTTTGATATGTATGAAGTTAATATTTTC
3201 AAGTAAGCAATCAGTCTACTACCATCAGATTATAAGCTTTTTTGTAATAATAGGTACATAAAATGTGTATGAAAAATCTA
3281 CAATAAACATGTTTATCTGATAGCAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuggGUUAUAGUUUGUAUAGu 5'
              ||:|||| |:|||||: 
Target 5' gttaCAGTATCTAGCATATTg 3'
 849 - 869 141.00 -12.90
2 
miRNA  3' uuggguuauagUUUGUAUAGu 5'
                     ||||||||: 
Target 5' gggtgtggagaAAACATATTa 3'
 129 - 149 134.00 -7.10
3 
miRNA  3' uugGGUUAUAGUUUGUAUAGu 5'
             :| | | :||||||:|: 
Target 5' aaaTCTACAATAAACATGTTt 3'
 3274 - 3294 126.00 -9.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30107882 20 COSMIC
COSN24380060 26 COSMIC
COSN30632424 31 COSMIC
COSN30113087 57 COSMIC
COSN30493925 59 COSMIC
COSN30184191 79 COSMIC
COSN30723213 85 COSMIC
COSN31563009 131 COSMIC
COSN28835880 249 COSMIC
COSN6336330 433 COSMIC
COSN15661200 518 COSMIC
COSN20103095 547 COSMIC
COSN18951812 888 COSMIC
COSN29714708 1189 COSMIC
COSN25779620 1401 COSMIC
COSN7902306 1628 COSMIC
COSN7902307 1701 COSMIC
COSN32064976 1738 COSMIC
COSN27247169 1856 COSMIC
COSN20623565 1890 COSMIC
COSN15884813 2164 COSMIC
COSN28650080 2183 COSMIC
COSN26538314 2214 COSMIC
COSN23880377 2226 COSMIC
COSN2182498 2605 COSMIC
COSN28472173 2675 COSMIC
COSN32062638 2675 COSMIC
COSN31576284 2677 COSMIC
COSN20103096 2680 COSMIC
COSN20091429 2681 COSMIC
COSN20091430 2686 COSMIC
rs114042185 1303 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1246029537 1 dbSNP
rs1429539335 13 dbSNP
rs779585952 14 dbSNP
rs746568694 16 dbSNP
rs370137716 19 dbSNP
rs1030649821 21 dbSNP
rs374464028 33 dbSNP
rs367765354 34 dbSNP
rs1205596344 35 dbSNP
rs371538561 35 dbSNP
rs200424267 36 dbSNP
rs370779289 41 dbSNP
rs995532786 41 dbSNP
rs763208716 49 dbSNP
rs766546564 53 dbSNP
rs1372112790 57 dbSNP
rs768152370 59 dbSNP
rs1010646449 61 dbSNP
rs1344003252 65 dbSNP
rs1236969399 69 dbSNP
rs577241171 70 dbSNP
rs1453488764 71 dbSNP
rs1301878369 73 dbSNP
rs139972256 76 dbSNP
rs1300630651 83 dbSNP
rs1239829117 84 dbSNP
rs953533420 105 dbSNP
rs1470668405 116 dbSNP
rs1406362914 117 dbSNP
rs1262605163 121 dbSNP
rs1463889159 129 dbSNP
rs1374542506 131 dbSNP
rs988058167 134 dbSNP
rs762821928 136 dbSNP
rs1018741895 137 dbSNP
rs35111646 139 dbSNP
rs1204722183 144 dbSNP
rs1253880084 146 dbSNP
rs181642151 155 dbSNP
rs996041444 163 dbSNP
rs972045706 164 dbSNP
rs1196945689 166 dbSNP
rs1320236674 167 dbSNP
rs1252309297 175 dbSNP
rs1028896017 176 dbSNP
rs1191586229 180 dbSNP
rs1315364021 181 dbSNP
rs142734792 187 dbSNP
rs374500527 188 dbSNP
rs1440282511 191 dbSNP
rs991529068 199 dbSNP
rs1168337813 205 dbSNP
rs184813947 209 dbSNP
rs1366646775 210 dbSNP
rs957302120 210 dbSNP
rs1445354100 222 dbSNP
rs541695940 229 dbSNP
rs1361509849 239 dbSNP
rs200807819 240 dbSNP
rs1046680182 241 dbSNP
rs1251513564 249 dbSNP
rs140145590 249 dbSNP
rs1294614856 251 dbSNP
rs1396314135 252 dbSNP
rs906433851 254 dbSNP
rs1247299026 255 dbSNP
rs1353578701 256 dbSNP
rs1307958533 259 dbSNP
rs146064562 260 dbSNP
rs1370194629 262 dbSNP
rs1337229807 274 dbSNP
rs1329031691 277 dbSNP
rs1386018049 283 dbSNP
rs1388243372 304 dbSNP
rs1324350250 305 dbSNP
rs1304703341 314 dbSNP
rs981635962 314 dbSNP
rs368873696 320 dbSNP
rs928808834 322 dbSNP
rs1471163652 328 dbSNP
rs1198366202 329 dbSNP
rs1364613375 329 dbSNP
rs1450271768 339 dbSNP
rs1271547499 342 dbSNP
rs551858356 362 dbSNP
rs1284495946 365 dbSNP
rs1010531777 367 dbSNP
rs1315143780 379 dbSNP
rs920153204 385 dbSNP
rs1279789516 392 dbSNP
rs564211195 394 dbSNP
rs1328979601 411 dbSNP
rs1238427596 412 dbSNP
rs528133276 418 dbSNP
rs1047065003 430 dbSNP
rs1405326815 435 dbSNP
rs548009347 436 dbSNP
rs1359831225 437 dbSNP
rs888880328 440 dbSNP
rs566274763 448 dbSNP
rs1402547738 451 dbSNP
rs1385711377 454 dbSNP
rs538736094 462 dbSNP
rs1477190956 464 dbSNP
rs1431696911 465 dbSNP
rs766187638 466 dbSNP
rs887112807 467 dbSNP
rs1261668416 470 dbSNP
rs1008310845 471 dbSNP
rs1448251072 480 dbSNP
rs1178823311 484 dbSNP
rs962280493 485 dbSNP
rs1321060071 486 dbSNP
rs566651371 487 dbSNP
rs747588380 487 dbSNP
rs1041560480 488 dbSNP
rs878940710 491 dbSNP
rs951990749 498 dbSNP
rs1339545645 499 dbSNP
rs1432854251 510 dbSNP
rs750452384 510 dbSNP
rs1248336356 511 dbSNP
rs1417999954 517 dbSNP
rs9359842 518 dbSNP
rs570332143 522 dbSNP
rs915976750 523 dbSNP
rs1408575153 528 dbSNP
rs191281475 535 dbSNP
rs1465450065 536 dbSNP
rs34012152 544 dbSNP
rs1188638085 545 dbSNP
rs1011450772 564 dbSNP
rs532468931 568 dbSNP
rs1459546586 569 dbSNP
rs1244621387 573 dbSNP
rs927821650 574 dbSNP
rs935247747 580 dbSNP
rs1019944156 583 dbSNP
rs1270681442 590 dbSNP
rs1052265338 603 dbSNP
rs1300347737 609 dbSNP
rs915166373 614 dbSNP
rs946360772 618 dbSNP
rs1385017194 623 dbSNP
rs1390878666 627 dbSNP
rs1050537533 632 dbSNP
rs1446368399 638 dbSNP
rs981201135 639 dbSNP
rs1173076404 640 dbSNP
rs888856973 647 dbSNP
rs1413725218 653 dbSNP
rs752310330 656 dbSNP
rs183768932 659 dbSNP
rs1040542357 668 dbSNP
rs376819978 671 dbSNP
rs897955073 678 dbSNP
rs534802013 693 dbSNP
rs1386599633 694 dbSNP
rs140068027 695 dbSNP
rs952293756 696 dbSNP
rs1230812373 702 dbSNP
rs1206364133 706 dbSNP
rs1438126039 720 dbSNP
rs760715346 724 dbSNP
rs1243621986 733 dbSNP
rs755582501 737 dbSNP
rs143723220 739 dbSNP
rs1315898359 755 dbSNP
rs1206448787 756 dbSNP
rs76421914 757 dbSNP
rs981974174 761 dbSNP
rs924702817 764 dbSNP
rs1249534590 776 dbSNP
rs1480298735 794 dbSNP
rs956504417 795 dbSNP
rs1300059033 798 dbSNP
rs1443415692 800 dbSNP
rs573298765 800 dbSNP
rs908532853 803 dbSNP
rs987947871 804 dbSNP
rs1473951029 806 dbSNP
rs1186705910 814 dbSNP
rs1386392342 821 dbSNP
rs1041117495 826 dbSNP
rs1163741813 826 dbSNP
rs1178523949 827 dbSNP
rs915140082 827 dbSNP
rs541588460 835 dbSNP
rs1219944945 839 dbSNP
rs1245947638 839 dbSNP
rs776781683 854 dbSNP
rs1490840400 855 dbSNP
rs532978273 867 dbSNP
rs1173060704 877 dbSNP
rs189271464 884 dbSNP
rs750989181 895 dbSNP
rs1309465584 897 dbSNP
rs376111974 924 dbSNP
rs200531649 925 dbSNP
rs151299819 929 dbSNP
rs1377296612 931 dbSNP
rs1366735765 938 dbSNP
rs1020647270 940 dbSNP
rs1452452835 942 dbSNP
rs1292905278 947 dbSNP
rs1160610205 950 dbSNP
rs545792085 951 dbSNP
rs1428164124 954 dbSNP
rs1197024971 955 dbSNP
rs563917351 962 dbSNP
rs1269552136 972 dbSNP
rs1192803093 988 dbSNP
rs1484836403 988 dbSNP
rs1216089314 992 dbSNP
rs758932327 993 dbSNP
rs2150820 995 dbSNP
rs1261421190 1000 dbSNP
rs1306733386 1008 dbSNP
rs199809405 1013 dbSNP
rs1049284236 1016 dbSNP
rs1278151749 1017 dbSNP
rs1282398211 1019 dbSNP
rs888017274 1031 dbSNP
rs1290174688 1037 dbSNP
rs1404920515 1040 dbSNP
rs1453772579 1040 dbSNP
rs1173757889 1046 dbSNP
rs1209611552 1052 dbSNP
rs374545911 1057 dbSNP
rs1169459530 1058 dbSNP
rs1426724051 1065 dbSNP
rs193119174 1066 dbSNP
rs1027155388 1069 dbSNP
rs6927416 1074 dbSNP
rs75749611 1075 dbSNP
rs1031689696 1076 dbSNP
rs1205760153 1081 dbSNP
rs548773926 1083 dbSNP
rs1257873155 1088 dbSNP
rs1309790898 1088 dbSNP
rs570368601 1088 dbSNP
rs1265753458 1091 dbSNP
rs944321749 1097 dbSNP
rs551873286 1098 dbSNP
rs41273305 1101 dbSNP
rs1454291989 1103 dbSNP
rs1406343649 1107 dbSNP
rs199591942 1108 dbSNP
rs780293256 1109 dbSNP
rs1460218274 1114 dbSNP
rs986411551 1116 dbSNP
rs910475080 1117 dbSNP
rs748337747 1119 dbSNP
rs769782459 1123 dbSNP
rs1185467259 1132 dbSNP
rs1461977688 1133 dbSNP
rs1250072570 1141 dbSNP
rs1432932294 1144 dbSNP
rs1194454985 1161 dbSNP
rs570731469 1166 dbSNP
rs1333652859 1169 dbSNP
rs1345983673 1171 dbSNP
rs139380273 1173 dbSNP
rs1287354095 1182 dbSNP
rs918992810 1186 dbSNP
rs553063998 1188 dbSNP
rs762910337 1196 dbSNP
rs1357898305 1200 dbSNP
rs6454741 1201 dbSNP
rs1247528855 1211 dbSNP
rs1383079883 1217 dbSNP
rs1327696919 1220 dbSNP
rs1305529192 1231 dbSNP
rs887987583 1231 dbSNP
rs1398311124 1243 dbSNP
rs903072323 1256 dbSNP
rs948918409 1257 dbSNP
rs774182144 1259 dbSNP
rs1165619828 1261 dbSNP
rs907466593 1262 dbSNP
rs894187464 1263 dbSNP
rs1003262507 1264 dbSNP
rs1284301095 1274 dbSNP
rs759314843 1275 dbSNP
rs1031661858 1276 dbSNP
rs891872040 1281 dbSNP
rs1213143990 1284 dbSNP
rs767274701 1293 dbSNP
rs1011656860 1302 dbSNP
rs114042185 1303 dbSNP
rs1222198013 1308 dbSNP
rs1490022445 1309 dbSNP
rs1464727230 1312 dbSNP
rs968249379 1320 dbSNP
rs985992080 1327 dbSNP
rs1255422738 1331 dbSNP
rs1017914225 1347 dbSNP
rs1337135650 1361 dbSNP
rs1307509598 1364 dbSNP
rs966014272 1373 dbSNP
rs1343568032 1376 dbSNP
rs760325345 1382 dbSNP
rs1425419900 1389 dbSNP
rs41273307 1396 dbSNP
rs562926237 1397 dbSNP
rs984500365 1407 dbSNP
rs1157105303 1421 dbSNP
rs1388264191 1431 dbSNP
rs1479628890 1437 dbSNP
rs1441348559 1446 dbSNP
rs1271709986 1455 dbSNP
rs10542667 1457 dbSNP
rs368447443 1457 dbSNP
rs921255523 1458 dbSNP
rs1282998949 1463 dbSNP
rs954071512 1467 dbSNP
rs908970309 1471 dbSNP
rs1202837192 1485 dbSNP
rs915301774 1486 dbSNP
rs1268291886 1488 dbSNP
rs1435613148 1489 dbSNP
rs945492688 1489 dbSNP
rs1284929926 1490 dbSNP
rs1405539176 1500 dbSNP
rs1325772722 1503 dbSNP
rs759018214 1515 dbSNP
rs1044588884 1518 dbSNP
rs1175912023 1519 dbSNP
rs1385965522 1519 dbSNP
rs1468596952 1524 dbSNP
rs907434536 1533 dbSNP
rs938979133 1534 dbSNP
rs1053045491 1535 dbSNP
rs1475405665 1539 dbSNP
rs891758003 1545 dbSNP
rs894133551 1552 dbSNP
rs545776026 1553 dbSNP
rs1011539109 1562 dbSNP
rs1335134529 1562 dbSNP
rs1021634007 1569 dbSNP
rs557763918 1573 dbSNP
rs1012612748 1589 dbSNP
rs1255236687 1594 dbSNP
rs1320947726 1595 dbSNP
rs1264840934 1596 dbSNP
rs889894520 1597 dbSNP
rs766977617 1604 dbSNP
rs1007784784 1610 dbSNP
rs1338673424 1615 dbSNP
rs185137951 1618 dbSNP
rs1406402135 1621 dbSNP
rs540193326 1623 dbSNP
rs1365969775 1625 dbSNP
rs1233974611 1635 dbSNP
rs966349528 1649 dbSNP
rs1450787425 1669 dbSNP
rs1408556420 1674 dbSNP
rs34440214 1684 dbSNP
rs1471198822 1694 dbSNP
rs752033346 1697 dbSNP
rs997476122 1709 dbSNP
rs1170110150 1717 dbSNP
rs1048110148 1724 dbSNP
rs1390306614 1726 dbSNP
rs888169279 1737 dbSNP
rs1459753942 1750 dbSNP
rs1418943673 1752 dbSNP
rs1003967914 1754 dbSNP
rs1436967551 1761 dbSNP
rs1026241016 1770 dbSNP
rs1270831741 1789 dbSNP
rs1462201460 1790 dbSNP
rs1167398941 1807 dbSNP
rs950330280 1820 dbSNP
rs1314529129 1821 dbSNP
rs755305931 1837 dbSNP
rs1385264254 1845 dbSNP
rs766922326 1846 dbSNP
rs1028553910 1852 dbSNP
rs1353165444 1869 dbSNP
rs396515 1870 dbSNP
rs1431015333 1872 dbSNP
rs1351942448 1876 dbSNP
rs980669397 1878 dbSNP
rs989408841 1882 dbSNP
rs928857720 1888 dbSNP
rs967159489 1891 dbSNP
rs1234698006 1895 dbSNP
rs1469279661 1919 dbSNP
rs978242292 1926 dbSNP
rs1206341100 1930 dbSNP
rs1483379744 1934 dbSNP
rs1270903285 1935 dbSNP
rs542523125 1948 dbSNP
rs528951527 1950 dbSNP
rs938557689 1963 dbSNP
rs1361615686 1964 dbSNP
rs1290646076 1973 dbSNP
rs542454462 1974 dbSNP
rs1274309083 1976 dbSNP
rs1440107113 1983 dbSNP
rs1281710707 1995 dbSNP
rs1410749803 2004 dbSNP
rs1345450164 2015 dbSNP
rs1301785624 2028 dbSNP
rs1053266457 2030 dbSNP
rs150038463 2051 dbSNP
rs531260742 2053 dbSNP
rs1405339461 2057 dbSNP
rs1475584426 2071 dbSNP
rs1178728292 2075 dbSNP
rs552576517 2089 dbSNP
rs190013463 2090 dbSNP
rs947364413 2092 dbSNP
rs528497915 2102 dbSNP
rs1215156162 2108 dbSNP
rs1416044643 2112 dbSNP
rs948631967 2112 dbSNP
rs1048051732 2116 dbSNP
rs546541541 2121 dbSNP
rs1045969 2126 dbSNP
rs1323229075 2130 dbSNP
rs1043085357 2136 dbSNP
rs1281741600 2146 dbSNP
rs1407350767 2151 dbSNP
rs754513193 2160 dbSNP
rs562202182 2161 dbSNP
rs767186628 2171 dbSNP
rs145381796 2183 dbSNP
rs1160857799 2186 dbSNP
rs1045972 2194 dbSNP
rs1457598675 2199 dbSNP
rs568888987 2203 dbSNP
rs1045974 2207 dbSNP
rs1408098643 2208 dbSNP
rs556784421 2209 dbSNP
rs1045975 2210 dbSNP
rs764337763 2212 dbSNP
rs1416099022 2213 dbSNP
rs142656876 2220 dbSNP
rs998338527 2221 dbSNP
rs1028459215 2223 dbSNP
rs901639655 2225 dbSNP
rs1339567335 2229 dbSNP
rs1045977 2230 dbSNP
rs1045978 2232 dbSNP
rs35689627 2232 dbSNP
rs997359466 2234 dbSNP
rs1026207013 2239 dbSNP
rs1313297529 2242 dbSNP
rs1295419573 2251 dbSNP
rs1045981 2252 dbSNP
rs1045982 2258 dbSNP
rs1045984 2269 dbSNP
rs1321931326 2275 dbSNP
rs1045985 2276 dbSNP
rs1035134212 2280 dbSNP
rs1334450878 2281 dbSNP
rs1271180056 2283 dbSNP
rs1467336423 2287 dbSNP
rs1045987 2294 dbSNP
rs961093637 2299 dbSNP
rs1045988 2303 dbSNP
rs1005873635 2304 dbSNP
rs1045992 2316 dbSNP
rs1426635088 2322 dbSNP
rs756322634 2323 dbSNP
rs1274558665 2328 dbSNP
rs1045995 2331 dbSNP
rs201767668 2333 dbSNP
rs1241441799 2339 dbSNP
rs752305607 2340 dbSNP
rs1205977757 2342 dbSNP
rs1045999 2353 dbSNP
rs948614339 2353 dbSNP
rs1251273834 2357 dbSNP
rs754385595 2368 dbSNP
rs1213182899 2373 dbSNP
rs1046001 2374 dbSNP
rs970208139 2386 dbSNP
rs1046003 2401 dbSNP
rs1255639393 2404 dbSNP
rs984071630 2411 dbSNP
rs909525687 2418 dbSNP
rs1299263016 2426 dbSNP
rs939723513 2427 dbSNP
rs1381602875 2437 dbSNP
rs1312404028 2440 dbSNP
rs1194202277 2448 dbSNP
rs1046008 2449 dbSNP
rs1402699156 2450 dbSNP
rs569069136 2459 dbSNP
rs1037120727 2464 dbSNP
rs539755586 2471 dbSNP
rs1474313840 2472 dbSNP
rs900889393 2473 dbSNP
rs1167815575 2474 dbSNP
rs1395690531 2477 dbSNP
rs1436029297 2488 dbSNP
rs1310598975 2494 dbSNP
rs1444019672 2495 dbSNP
rs933748796 2497 dbSNP
rs779593199 2499 dbSNP
rs1401014861 2504 dbSNP
rs979837596 2506 dbSNP
rs1250314366 2513 dbSNP
rs1484325902 2525 dbSNP
rs928381354 2529 dbSNP
rs1382399323 2534 dbSNP
rs1049846966 2536 dbSNP
rs145734670 2539 dbSNP
rs1011107802 2541 dbSNP
rs1046016 2543 dbSNP
rs1046018 2544 dbSNP
rs1226736305 2547 dbSNP
rs367914203 2548 dbSNP
rs1389390889 2550 dbSNP
rs988954366 2554 dbSNP
rs1349295238 2561 dbSNP
rs1046019 2562 dbSNP
rs147781131 2576 dbSNP
rs947667989 2578 dbSNP
rs1424132690 2580 dbSNP
rs533774449 2583 dbSNP
rs1254284100 2588 dbSNP
rs1325446375 2589 dbSNP
rs1458654797 2608 dbSNP
rs1363374039 2617 dbSNP
rs1043445209 2624 dbSNP
rs1473748973 2625 dbSNP
rs1042316222 2635 dbSNP
rs1046021 2640 dbSNP
rs999510769 2641 dbSNP
rs1264727687 2649 dbSNP
rs1128765 2651 dbSNP
rs1211101939 2656 dbSNP
rs1287292748 2660 dbSNP
rs1325615658 2660 dbSNP
rs1343549326 2660 dbSNP
rs1384555887 2660 dbSNP
rs1387367990 2660 dbSNP
rs1447870014 2660 dbSNP
rs550958326 2660 dbSNP
rs57998485 2660 dbSNP
rs879251375 2660 dbSNP
rs1463376828 2662 dbSNP
rs1458993874 2670 dbSNP
rs1413227412 2671 dbSNP
rs1035446369 2672 dbSNP
rs1379808726 2672 dbSNP
rs1260642450 2674 dbSNP
rs960790379 2674 dbSNP
rs11752344 2675 dbSNP
rs1206479598 2675 dbSNP
rs1389656297 2676 dbSNP
rs567782022 2676 dbSNP
rs79296059 2676 dbSNP
rs1336487904 2677 dbSNP
rs911267396 2677 dbSNP
rs1455565692 2678 dbSNP
rs1376526363 2680 dbSNP
rs4053640 2680 dbSNP
rs370153112 2681 dbSNP
rs1451015400 2682 dbSNP
rs1248200316 2683 dbSNP
rs879189765 2686 dbSNP
rs942701155 2688 dbSNP
rs969908282 2690 dbSNP
rs1320349905 2691 dbSNP
rs397843297 2691 dbSNP
rs1393610854 2693 dbSNP
rs555363488 2705 dbSNP
rs573823058 2709 dbSNP
rs2183647 2710 dbSNP
rs901271303 2716 dbSNP
rs544325083 2725 dbSNP
rs984019361 2726 dbSNP
rs1230620502 2728 dbSNP
rs909775005 2731 dbSNP
rs997326964 2739 dbSNP
rs116276135 2740 dbSNP
rs1342673413 2741 dbSNP
rs1335249747 2763 dbSNP
rs1409955700 2764 dbSNP
rs777741371 2772 dbSNP
rs1394959093 2791 dbSNP
rs922262313 2802 dbSNP
rs933741933 2804 dbSNP
rs886344648 2809 dbSNP
rs1006175733 2813 dbSNP
rs1207847702 2814 dbSNP
rs1273540095 2815 dbSNP
rs181091871 2817 dbSNP
rs946912346 2839 dbSNP
rs1044302952 2840 dbSNP
rs1437172761 2840 dbSNP
rs1272312389 2850 dbSNP
rs1207407944 2854 dbSNP
rs1342906032 2858 dbSNP
rs764203802 2860 dbSNP
rs7753377 2860 dbSNP
rs1189340122 2863 dbSNP
rs1381598996 2864 dbSNP
rs1285223376 2869 dbSNP
rs1000194564 2875 dbSNP
rs1048641 2876 dbSNP
rs1310349360 2876 dbSNP
rs1183417647 2878 dbSNP
rs879112207 2879 dbSNP
rs896521201 2879 dbSNP
rs1001620331 2880 dbSNP
rs1415431306 2881 dbSNP
rs1035419532 2882 dbSNP
rs1012323686 2886 dbSNP
rs959803901 2890 dbSNP
rs1249565607 2893 dbSNP
rs952123560 2894 dbSNP
rs988924753 2897 dbSNP
rs1020442055 2898 dbSNP
rs1456341231 2911 dbSNP
rs1165220383 2913 dbSNP
rs1395594628 2914 dbSNP
rs371650073 2917 dbSNP
rs1292290044 2921 dbSNP
rs1327580122 2926 dbSNP
rs1290575613 2927 dbSNP
rs1229612721 2933 dbSNP
rs1367594512 2937 dbSNP
rs1345435355 2951 dbSNP
rs961278393 2952 dbSNP
rs185689270 2970 dbSNP
rs1351276648 2980 dbSNP
rs546629400 2981 dbSNP
rs745746680 2982 dbSNP
rs1348743325 2985 dbSNP
rs1456347301 2989 dbSNP
rs1227965607 3002 dbSNP
rs1161087058 3010 dbSNP
rs1294149916 3028 dbSNP
rs1472915719 3028 dbSNP
rs955072069 3029 dbSNP
rs1336667162 3031 dbSNP
rs911474341 3033 dbSNP
rs552280884 3048 dbSNP
rs977176488 3057 dbSNP
rs376356607 3058 dbSNP
rs376217098 3068 dbSNP
rs529374190 3069 dbSNP
rs373032951 3077 dbSNP
rs1047591686 3100 dbSNP
rs886233477 3109 dbSNP
rs1323473324 3112 dbSNP
rs746168393 3122 dbSNP
rs1216997394 3126 dbSNP
rs1274898174 3129 dbSNP
rs1433976301 3133 dbSNP
rs1385988801 3145 dbSNP
rs771784595 3151 dbSNP
rs1057146395 3152 dbSNP
rs1188135534 3157 dbSNP
rs896468896 3164 dbSNP
rs1425915325 3168 dbSNP
rs188836491 3171 dbSNP
rs1045100933 3179 dbSNP
rs1349782454 3181 dbSNP
rs1426034949 3183 dbSNP
rs1462910491 3185 dbSNP
rs1250076464 3187 dbSNP
rs1209776653 3191 dbSNP
rs1300446043 3208 dbSNP
rs905791740 3211 dbSNP
rs1001188516 3212 dbSNP
rs1368723582 3214 dbSNP
rs1254594894 3233 dbSNP
rs1212915755 3239 dbSNP
rs1313281268 3246 dbSNP
rs180802785 3247 dbSNP
rs569300541 3253 dbSNP
rs1313697234 3254 dbSNP
rs895560000 3258 dbSNP
rs1299294984 3259 dbSNP
rs539279036 3263 dbSNP
rs551509277 3264 dbSNP
rs1435325418 3265 dbSNP
rs1378235258 3266 dbSNP
rs1300855289 3267 dbSNP
rs1357653879 3270 dbSNP
rs141209138 3279 dbSNP
rs114571602 3284 dbSNP
rs1427852636 3290 dbSNP
rs1392293926 3291 dbSNP
rs1189495633 3295 dbSNP
rs1307878753 3302 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000275072.4 | 3UTR | CUUAUUUUUUUACAUACUUCAUAUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28544 Breast cancer -0.724 3.2e-5 -0.670 1.7e-4 24 Click to see details
GSE19783 ER- ER- breast cancer -0.401 1.2e-4 -0.353 7.1e-4 79 Click to see details
GSE19536 Breast cancer -0.287 1.9e-3 -0.248 6.4e-3 100 Click to see details
GSE42095 Differentiated embryonic stem cells 0.47 1.2e-2 0.542 3.8e-3 23 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.318 6.1e-2 0.052 4.0e-1 25 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.279 1.2e-1 -0.223 1.7e-1 20 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.244 1.2e-1 0.302 7.1e-2 25 Click to see details
GSE38226 Liver fibrosis 0.263 1.2e-1 0.052 4.1e-1 21 Click to see details
GSE32688 Pancreatic cancer 0.134 2.3e-1 0.130 2.4e-1 32 Click to see details
GSE21687 Ependynoma primary tumors 0.052 3.4e-1 0.140 1.3e-1 64 Click to see details
GSE19350 CNS germ cell tumors -0.061 4.3e-1 0.306 1.7e-1 12 Click to see details
GSE28260 Renal cortex and medulla 0.046 4.4e-1 0.121 3.5e-1 13 Click to see details
GSE26953 Aortic valvular endothelial cells -0.027 4.5e-1 -0.063 3.8e-1 24 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.042 4.6e-1 -0.071 4.4e-1 7 Click to see details
GSE19783 ER+ ER+ breast cancer 0.013 4.8e-1 -0.074 3.8e-1 20 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
STAD -0.903 0.02 -0.700 0.09 5 Click to see details
CHOL 0.85 0.08 0.800 0.1 4 Click to see details
LUSC 0.264 0.14 0.377 0.06 19 Click to see details
HNSC 0.213 0.16 0.289 0.09 23 Click to see details
ESCA 0.541 0.23 0.400 0.3 4 Click to see details
LIHC -0.166 0.26 -0.096 0.35 18 Click to see details
BRCA -0.078 0.26 -0.155 0.1 72 Click to see details
LUAD -0.267 0.26 -0.381 0.18 8 Click to see details
KIRC -0.138 0.33 -0.088 0.39 13 Click to see details
THCA 0.09 0.34 0.078 0.36 24 Click to see details
KICH 0.115 0.43 -0.100 0.44 5 Click to see details
KIRP 0.084 0.43 -0.107 0.41 7 Click to see details
PRAD 0.033 0.44 0.129 0.28 23 Click to see details
UCEC -0.013 0.48 -0.100 0.36 15 Click to see details
UCEC -0.013 0.48 -0.100 0.36 15 Click to see details
UCEC -0.013 0.48 -0.100 0.36 15 Click to see details
UCEC -0.013 0.48 -0.100 0.36 15 Click to see details
UCEC -0.013 0.48 -0.100 0.36 15 Click to see details
UCEC -0.013 0.48 -0.100 0.36 15 Click to see details
60 hsa-miR-190b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT054581 IGF1 insulin like growth factor 1 4 1
MIRT066966 ATXN7L3B ataxin 7 like 3B 2 2
MIRT192449 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT250414 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT306294 KLHL24 kelch like family member 24 2 2
MIRT355845 SGMS2 sphingomyelin synthase 2 2 4
MIRT437770 MTMR6 myotubularin related protein 6 1 1
MIRT437771 MTMR6 myotubularin related protein 6 1 1
MIRT437772 Mtmr6 myotubularin related protein 6 1 1
MIRT444672 CDKL2 cyclin dependent kinase like 2 2 2
MIRT446389 PCDHB11 protocadherin beta 11 2 2
MIRT446634 SDC3 syndecan 3 2 2
MIRT449410 TRIM5 tripartite motif containing 5 2 2
MIRT449560 GPC5 glypican 5 2 2
MIRT469928 PTPRJ protein tyrosine phosphatase, receptor type J 2 6
MIRT473736 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT474210 LDHA lactate dehydrogenase A 2 2
MIRT474583 KLF6 Kruppel like factor 6 2 2
MIRT476732 FOXN2 forkhead box N2 2 2
MIRT478455 DAB2 DAB2, clathrin adaptor protein 2 2
MIRT495327 ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif 8 2 4
MIRT498615 MTRNR2L10 MT-RNR2-like 10 2 12
MIRT501734 OVOL1 ovo like transcriptional repressor 1 2 2
MIRT501849 MTRNR2L8 MT-RNR2-like 8 2 14
MIRT504678 CYGB cytoglobin 2 4
MIRT506517 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 6
MIRT507984 BCL2L13 BCL2 like 13 2 4
MIRT508444 ZNF608 zinc finger protein 608 2 4
MIRT511366 IL6ST interleukin 6 signal transducer 2 4
MIRT520515 TRA2B transformer 2 beta homolog 2 2
MIRT524571 CALML4 calmodulin like 4 2 4
MIRT531896 INVS inversin 2 4
MIRT533916 TATDN2 TatD DNase domain containing 2 2 2
MIRT537503 FAM13B family with sequence similarity 13 member B 2 2
MIRT541689 CCDC160 coiled-coil domain containing 160 2 8
MIRT544419 ZNF460 zinc finger protein 460 2 4
MIRT544615 CSDE1 cold shock domain containing E1 2 2
MIRT545076 IL7R interleukin 7 receptor 2 2
MIRT545849 ZNF264 zinc finger protein 264 2 4
MIRT547436 MED4 mediator complex subunit 4 2 2
MIRT550157 ZNF223 zinc finger protein 223 2 4
MIRT553948 STAMBP STAM binding protein 2 2
MIRT554395 SERP1 stress associated endoplasmic reticulum protein 1 2 2
MIRT555667 PGAM4 phosphoglycerate mutase family member 4 2 4
MIRT564193 PM20D2 peptidase M20 domain containing 2 2 2
MIRT566792 MKL2 MKL1/myocardin like 2 2 2
MIRT566843 LRRC58 leucine rich repeat containing 58 2 2
MIRT572516 KIAA0232 KIAA0232 2 2
MIRT607428 NOTCH2NL notch 2 N-terminal like 2 10
MIRT627779 RAB30 RAB30, member RAS oncogene family 2 2
MIRT635159 ENO4 enolase family member 4 2 2
MIRT642159 ADCYAP1R1 ADCYAP receptor type I 3 2
MIRT646205 DUSP10 dual specificity phosphatase 10 2 2
MIRT657007 KCNMB4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 2 2
MIRT665817 TMEM161B transmembrane protein 161B 2 2
MIRT667488 MAP3K2 mitogen-activated protein kinase kinase kinase 2 2 2
MIRT707098 ZNF850 zinc finger protein 850 2 2
MIRT708719 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT735521 HUS1 HUS1 checkpoint clamp component 3 0
MIRT736644 AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 2 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-1 Anthocyanin NULL 145858 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Caffeic acid NULL 689043 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Catechin approved 9064 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-1 Curcumin NULL 969516 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Ferulic acid NULL 445858 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Hesperidin NULL 10621 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-1 Quercetin NULL 5280343 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Galactose NULL 6036 Quantitative real-time PCR lens 22736950 2012 up-regulated
miR-1 Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 down-regulated
miR-1 Trichostatin A (TSA) NULL 444732 Quantitative real-time PCR myocardial differentiation of mouse ES cells 19521018 2009 down-regulated
miR-1 Sulfonyl-hydrazone-1 (SHZ) NULL NULL Quantitative real-time PCR Murine broblast-derived Induced pluripotent stem cells 21445862 2011 up-regulated
miR-1 Cocaine NULL 446220 Next-generation sequencing ventral striatum 21708909 2011 up-regulated
miR-1 Atorvastatin approved 60823 Quantitative real-time PCR Cardiomyocyte 23860036 2013 down-regualted
miR-1 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miR-1 Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
miR-1 Palmitic acid approved 985 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
miR-1 17beta-estradiol (E2) approved 5757 Microarray MCF-7AKT breast cancer cells 19528081 2009 down-regulated
miR-1 Essential amino acids (EAA) NULL NULL Quantitative real-time PCR skeletal muscle of young adults 19828686 2009 up-regulated
miR-1 Hydrogen peroxide (H2O2) NULL 784 Quantitative real-time PCR Human umbilical vein endothelial cells 21527937 2011 down-regulated
miR-1 Trichostatin A (TSA) NULL 444732 Microarray apoptosis-resistant breast cancer cells 21971930 2011 up-regulated
miR-1 Arsenic trioxide approved 14888 Quantitative real-time PCR acute promyelocytic leukemia 22072212 2012 up-regulated
miR-1 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miR-1 Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
miR-1 Arsenic trioxide approved 14888 Quantitative real-time PCR cardia 22889704 2012 up-regulated
miR-1 Perfluorooctane sulfonate NULL 74483 Microarray zebrafish embryos 20878907 2011 up-regulated
miR-1 Quinidine approved 441074 Quantitative real-time PCR myocardial infarction (MI) rats 19775284 2009 up-regulated
miR-1 Tanshinone IIA NULL 164676 Quantitative real-time PCR myocardial infarction (MI) rats 19775284 2009 down-regulated
miR-1 Tanshinone IIA NULL 164676 Quantitative real-time PCR post-infarction rat cardiomyocytes 21220930 2011 down-regulated
miR-1 Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miR-1 Dexamethasone approved 5743 Microarray adrenals and granulosa cells 24205079 2014 up-regulated
miR-1 Thiourea (TU) NULL 737139 Quantitative real-time PCR skeletal muscle and heart 22142802 2012 up-regulated
miR-1 Thiourea (TU) NULL 737139 Quantitative real-time PCR skeletal muscle and heart 22142802 2012 down-regulated
miR-1 Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 up-regulated
miR-190b Catechin approved 9064 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-190b Atorvastatin approved 60823 Microarray PC3 prostate cancer cells 23936432 2013 up-regualted
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-190b Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)

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