pre-miRNA Information
pre-miRNA hsa-mir-4524a   
Genomic Coordinates chr17: 69099564 - 69099632
Description Homo sapiens miR-4524a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4524a-5p
Sequence 6| AUAGCAGCAUGAACCUGUCUCA |27
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1322445998 8 dbSNP
rs1350790266 13 dbSNP
rs1263495678 21 dbSNP
Putative Targets

Gene Information
Gene Symbol WNK3   
Synonyms PRKWNK3
Description WNK lysine deficient protein kinase 3
Transcript NM_001002838   
Other Transcripts NM_020922   
Expression
Putative miRNA Targets on WNK3
3'UTR of WNK3
(miRNA target sites are highlighted)
>WNK3|NM_001002838|3'UTR
   1 ATCAGAGTAGATGGTGATAAAAAGGGAGGTTTTTTCAGAATTATTTTCAGGACACCCAAGATATTAAAGTTTCTTCCTCT
  81 TGGGTTCTGTCATATTTTCCCTCATTTGAGTTTACTTTAGACTATATATTTTTTGTTCCAGTGTGGTATTTGATACAGCT
 161 CATCATTCTGTAGAAATGTGCAGTTTGCAGATAGAACACTGCACACAGAAATGTTTTTTCACTTCAAATTCTATCCTCTT
 241 TGATACTTGATTTTTTAAAAATACTGTTCAGAATGCTTTAATAAGCTCAGCTTGAGCATTACCATTTCCAGGACACTTTC
 321 CATGAATTGTTGAGAAGCTCCCCATCCCCCGCCTTTTTTTTTTTTTTTTTTAACTGCTGCTATCTGCAGCTGGATACTCT
 401 TCTTTAAAAATGTTTAAAAATTATTTAGATTGATTCTCCCCAAATGTGGATGAACTGAGACCCTCCATCAGCCAGAGTCT
 481 TATGGGATCTTCACTTCACATGTTTGTCTTAGGTTTACCTTTCACAGAAGGCAGGGTAACTTGCTGCAGGAAACGTTTTG
 561 GTGTATAAAATTAGAATCACTTTTTTTTTTTTTTTTGAGATGGAGTCTCTCTCTGTCACCCAGGTTGGAGTGCAGTGGTG
 641 TGATCTTGGCTCACTGCTGCAACCTCCCCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACT
 721 ACAGGCGCCAGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGGATGGGGTTTCACTATGTTGGCCAGACTGGTC
 801 TCAAACTCCTAACCTTGTGATCCGCCCTCCTTAGCCCCCCCAAAAAATTACAATAATTTTGTCAACCAATACAGAACATG
 881 AGCCCTTTTTAAATGTGATTTCCCGTCATCACAGCAGTAGGATGAAGCCTTGTTTTGGGTGAGACAGAGGGAAAGGGAAA
 961 AAACAGAATTGTAACAGTTCCTTGATTCTGCAGATACTGCTGCTGTTTTACGATTTCAGTAATAATTCAAAGCAGCTGTC
1041 TCCTTGTTTCTCACATGCATACTACATTGGTTTTGAGCATCTGAGAGGCATTGGTTTGTCTTGCATTCTTTTGCAAGGCA
1121 TATATTGCAGCTGATATGAATCTCGTTTGGGGGGAATCCTTGTATTCCTAACAAGGGGGATTAAAGCTACACCTCAATCC
1201 ATTCTTCTGAAGTGAAATTTACTTGACACAGTAGGTTTCGAGACTTACATATGAAACACTGGCTTTACAGGGTTCTCAGA
1281 GATGTGGGGTATACACTGTCCTGCAGTGAGATAGTAGACCCTAGAAGGATACTATTTAAGTTGTCCTTAGCTCTTTTTAA
1361 TTACAATTTTTAGTTGTTAGAATTTCTTTTTAGTATCTATAGTATCTTAGATGATTTTAGATCTTAAATGAGTTTGGCAG
1441 CCTCTTTAGAATCTGAGAGAGATCACTGTCAAGTTGCACTTTACTGGGTTTTATCCAGTTTTAGGAGGAGGGGAGGCAAT
1521 GTCAAAATGTACACCTTTGGTTTTTAAGAAGGTTAACTATAATAATGTTAAAGGCTAGTCACAGGGTTACCTAATGCTCA
1601 GTCTGTGAAACCTAAATAGAATTCTTAAAATGTTATTTACCAACTAAGTATTCATGTTCAAATTACTTACCTTCCACTCT
1681 GAAGACTTTAAGGTCATTTCTAATACACATTTACCTAATTAGGAGTTCTGTCTACTAGTAAACATTCCAAATTGCTACCC
1761 AACATTACTGTTAACAGATTTTCCTCCGTATTCTTCTAAAAATTATACCCCATGGGCTTGCCAGGTAATGACGAAAACTT
1841 AATGGGTGTACTTTTTTTTTTTTTTGCACAGTCTACTTTGTGACATTAAGTACCTCTTTTCCAAAAAAAAAAAAAAATGT
1921 GTTTTATGTTGCTTACCTGAGGATCACATCCATTATCAAGAAGATTCTGTCGCTATAATTTGAGGCATCTAGGGCAGCAT
2001 TTTGAGAATTGCTGTTGATAAGATCCACTGTTTCTTTTCATAGAACATGATCTGTTTTGTATGAGTCTTTCCAAATGTTA
2081 AGTACAGATTCTTCAAATTTCTTGTACAGTATTGGTTTGCAGTTTAAAGTGATTTTAGGACATTAGTGTAATGCAAATGC
2161 TTGCATTGCACTGTTTTCCATATGTATAAAAACAATGCTCCTAAAATCCCTAATTCTTTAAAACTGCCTGTGTTTCATTA
2241 TAAAAAGTTGGCTTTGTGTAATTACACCGAGCCATACAACCTATAAAGTGAAAATACTGCAGATTTTAGGACCCCTTCTT
2321 CTCTAGTCACAATCATTTTAAACAGTGTACCCCAGGATGAAAAAAGCTCCATGGCTGACATGTACAATTACATGTATTAA
2401 TGACTGCTCTACATCCTATGTTCTGCCTTTGGCCACCACCTCTATTCCACATATAATTCATCATTCTTGTTTGCCTGCAG
2481 ACTCTTGCAGTGCCTTGTAATATTTACAATCTTTTCAGGTTTTTGCTGGAAAGAAAAGTAGTCTTCTAAAGTTTGAAGAT
2561 GGTGAATAGTGTACTGCTGTCTCCATGCTGACTGCAGTAACCGGGTTATCATATATGTTATGTATACATTATGTATATAT
2641 AACATGTGTACATTTAAAAATACAGAAAAAAGTGAGCTTGTGCAGAAATGGAGAAAACAATGTTATTCTCATCACTGTGG
2721 GGTTTTATTAAAATTATTTTTTCCCATGACTTACATGTTTGGTTCAGATTATAGTCACTTTGACTGTAAATACTGGCTAG
2801 TTTTCTATCCAGGGCTTTTGCATTATTTCATAATTTTGCTAAATCATATAATAGTGCTATTTTCATCCTTGTCTGAGGTA
2881 CTTTTCCTCCCCAGAAATAATTAACTTGAGGTAAAGCTCAGAAATTCCCTTCTTAACAAAGAGCCTACTATATAAAAAGG
2961 GCCTTCCTTTCCAAAAAACACACAAACCTGTCCTTTTCATTTTCCTTCTTGTAGAGGAGAAAATGGTTGTACTTAACCAT
3041 CCTGCTTGTAAAGTTTATTCAGAGGATAGTCTGTATGTCCAGCCACCATGTTTACTTCTCAAAGTGCAAGTCTGATGAAT
3121 AGTACTGTATCTCCATATGTGGTAATGTGAGCATTTCATCATGAAGTACCTGCTGCTATGTCTGTGAAGTTGGGTGTAAC
3201 ATCATAAGAATATGAAACCAGTATTGGTGTAAATCTAATGAAAATAACCCTATGTATATTTGTAGCAGTCTTGAATCTCT
3281 ATTTAAGGTAATTTGCTGTAATATAACAAATATTCATTCTGTTTTTCATCCCTTCCTTGCCAGTTTTATATCAAGCATGA
3361 ATTCCAATGGTTTGACAGCAAAATTATCTGTGAAAGTTTAAAAGGCACTTTTCTGCTGTGATTTTTGGATTGAGTGTGGA
3441 GTGTTATGTACAGTTTGATGGGATATATCATTTTAGAACCCCAGATTTAATTCTAGTCCAATTAATTTTGTTTAACTACC
3521 TCGTTTTCAGTGCTGTTTTGGGTGCACAAGTAAACACTACCTGTGAAACTTGCTTTTTTGCCTTGATTCTCAGTATTCTT
3601 TCAGATTATAAATCTGGTCTGCCTCTTTTTTCCCAGTGCTAGCCAACAGTTTGAGATGAGAGGGATCATCACTCTCATCT
3681 GTGTTTAAGTGGAGAGCCATGTGCTTCTGTGAAATATGCTTTGGGGATTTGGGGGTGGAGAGCAGAAGAATAATTGAAAT
3761 TGGTGGCAATATAGGATTTAGGTGTAGGAGTTAGTTATAAAATAAACAAATGGTAAGAAAGTACCTGAATTAGACAATCC
3841 AGTGCCTATAACTTTGCATTTTTTATTAGAGATGCATTTCTCGTCTGTGTGCCTAAAGGGCAATGGGTTGAAATTGCTTT
3921 AACTACCACAGCGAAATATTTGACAAATCCTTCAGCAATGGCCTATCATTCAACATATATTAGCACAGTGCTAGGTATTT
4001 GCAGTGGTATTTTGTTACCTTAAAACGGCCAAATGCATTTAGTTGAAATGTAGTTGATAGTAAGGGTTTTATATAACTTT
4081 ATCCAATCTCTAAAGTTTATGGAAGCATTGACTTTCTTCTTTGCTGTCTTTTCTGAGTGATGAAAATGATGCATTCCTTT
4161 TTTTTCCTTGAAAACTCAGCAAATGTTTGTAACCAGATGTTCCTTGTTTCACATGTTTACTGTGTAACACTACAGCATAT
4241 TTAATATTGGTAAATACTGTATTTCAGTCATTATGCATAAGTACATTCCTGAGGTATATTTGCCATCATTTTGGGATTCA
4321 GTTATTTTATCTTCTGTTTGGGTCAGAAAAACTTGAACTATCTGAGGTGGTATGCAGGCCATTTTCTAGAAGATTGTTTT
4401 TTGAATCTGTAGTTTATCAAGGACTTGTTCCCCCCCTCCCTTTGTTTAGAAGAGGAATCAGAAAAGGGGGGTGGTGTGTA
4481 GAAAAGGCCTTTGATTTGATAGGTGTAATTTCTAAGATTGAAATTTTAAAAATGCAGATCGTAAGATAGTAACACTCAAA
4561 CTTGATAAAATCCTTTGAATTGAAATTAGTATGAAATTTTTATGGAACCAAATGCCTTCAGGTCACCCTGGAAATAGTCT
4641 TTGTATGTGAAAGATCAACACAAACATTGGTCAGGAACCCTGACAGCCAATATATGAAGGAGCCTGGGATAGTAACTAGG
4721 TTACACTAAAGTTATTTTCAACTAAGATAGCTAGACGAGTGTACAAACCAATAGCTCCTATTCTGGAAGGTTTTCTTTTT
4801 ATTAAAAAAAATTCAAACAAGGTTAAAAGTCAAGCAAGAAGGGAAGAGAGAAACTGGGTTCTGAGAAAAAAATGTGCCAG
4881 TATAAAATAAACTCCTAAATGCGTGCTTGTCATCCTCTAGTTTTTTTTTAAGTTGAATTTCTTTTCCACTGTAACTTAAG
4961 ATTTGAGATTGAGGTTTGCGGTCCAGAACATACCCTCAGCAGATACAGTGACTAACTGGAAAGTGCAGTTGTTCAAGGTC
5041 TGTCATGCTCAATCACCTAAAGCTATAATTTGTTTGATATATTAAGCATGTAGACCTAGTGCAGCATGGGAGCCACTCAG
5121 GAAGTTTATGCAATTAATAAACTTTCAGCATAATTTACTATGAAGTATGCAGAATTTCACCCTCTTCTCCACACTTAACA
5201 TTTAGTTGTATATGTGAACTCTCCTTTCTTAATTGGGGAATGTAGCATTATATAGAATGTTGTTAAAGTTAATTTTAATC
5281 CTTTTTGACATTAACCTTTTTTTTTTTTTGGTAAACCAAGTGATCTGCCTTTCAGCAACTGTCTTATTTTGGTTCTTTGA
5361 AACTGTGATTTTTATTTCATTTGTACCCAACCATTGTAAGTATTTTGTTTTGTTTCCTGGAAATTCTGTTTTGAAACAGA
5441 AAATAAAGGCTGTGTTAAATGAGTATGTTATCTTATTAAAATGCTGCCATAGTCACTGCAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acucugUCCAAGUACGACGAUa 5'
                | || | |||||||| 
Target 5' atcatgAAGTACCTGCTGCTAt 3'
3158 - 3179 156.00 -12.00
2
miRNA  3' acucuguccAAGU--ACGACGAUa 5'
                   ||:|  |||||||| 
Target 5' tttttttttTTTAACTGCTGCTAt 3'
360 - 383 151.00 -11.20
3
miRNA  3' acucUGUCCAAGUACGACGAUa 5'
              :||| | | |||||||: 
Target 5' ttctGCAGATAC-TGCTGCTGt 3'
986 - 1006 141.00 -13.60
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1381037597 1 dbSNP
rs782150220 31 dbSNP
rs782475626 36 dbSNP
rs782772699 43 dbSNP
rs1233050099 45 dbSNP
rs782122468 48 dbSNP
rs1313711273 59 dbSNP
rs1210643601 63 dbSNP
rs1260064586 69 dbSNP
rs1188236268 78 dbSNP
rs781896389 89 dbSNP
rs1450218743 100 dbSNP
rs1193206655 101 dbSNP
rs1393574852 112 dbSNP
rs1416505720 127 dbSNP
rs1177167597 133 dbSNP
rs1344978150 160 dbSNP
rs781977478 170 dbSNP
rs1323166205 180 dbSNP
rs1365264968 191 dbSNP
rs1030467467 206 dbSNP
rs188823444 215 dbSNP
rs1300802713 220 dbSNP
rs1369361657 235 dbSNP
rs1219466076 238 dbSNP
rs1305970925 269 dbSNP
rs1314928365 288 dbSNP
rs1210486252 304 dbSNP
rs1268733693 319 dbSNP
rs1465397957 323 dbSNP
rs1213206638 341 dbSNP
rs868954779 344 dbSNP
rs1245068286 348 dbSNP
rs1479090945 350 dbSNP
rs200442812 351 dbSNP
rs902832362 352 dbSNP
rs1417756886 354 dbSNP
rs1161968478 368 dbSNP
rs1390110274 371 dbSNP
rs1297298804 372 dbSNP
rs1323243707 372 dbSNP
rs1460458499 372 dbSNP
rs782069866 372 dbSNP
rs1370865515 383 dbSNP
rs1230073067 391 dbSNP
rs1288893688 409 dbSNP
rs1041413895 424 dbSNP
rs1333997224 438 dbSNP
rs1231383607 440 dbSNP
rs1287766052 446 dbSNP
rs782677188 464 dbSNP
rs1222559138 481 dbSNP
rs1232566181 500 dbSNP
rs1482277883 501 dbSNP
rs1184863734 502 dbSNP
rs781919195 539 dbSNP
rs184687007 554 dbSNP
rs1163426004 555 dbSNP
rs782788965 558 dbSNP
rs1415298321 562 dbSNP
rs1405483701 579 dbSNP
rs1327757479 580 dbSNP
rs1308336159 597 dbSNP
rs1352459386 597 dbSNP
rs1411292247 597 dbSNP
rs1354615260 602 dbSNP
rs1412805481 613 dbSNP
rs1229033273 615 dbSNP
rs1285937088 615 dbSNP
rs1358524711 615 dbSNP
rs1272548349 623 dbSNP
rs1340238206 628 dbSNP
rs1207569843 633 dbSNP
rs1252925538 646 dbSNP
rs1485575244 647 dbSNP
rs1186004788 667 dbSNP
rs1239785251 668 dbSNP
rs1166746702 669 dbSNP
rs868917246 670 dbSNP
rs1168862521 674 dbSNP
rs1374602424 677 dbSNP
rs146462906 681 dbSNP
rs937121454 684 dbSNP
rs928500074 685 dbSNP
rs1336089185 686 dbSNP
rs192969122 695 dbSNP
rs782633057 706 dbSNP
rs1429957667 716 dbSNP
rs1269604632 726 dbSNP
rs1363161540 727 dbSNP
rs949519798 730 dbSNP
rs919238527 736 dbSNP
rs972078974 738 dbSNP
rs963351401 742 dbSNP
rs1016436779 743 dbSNP
rs1193136348 744 dbSNP
rs1245614705 745 dbSNP
rs782357281 749 dbSNP
rs1450846101 762 dbSNP
rs1188769585 770 dbSNP
rs986361085 771 dbSNP
rs1464346993 775 dbSNP
rs1174057253 782 dbSNP
rs1402653559 783 dbSNP
rs1400006377 784 dbSNP
rs140620657 785 dbSNP
rs782584372 790 dbSNP
rs1437450034 792 dbSNP
rs782443697 794 dbSNP
rs1370450049 796 dbSNP
rs967185957 799 dbSNP
rs1276934120 803 dbSNP
rs1346178267 804 dbSNP
rs376464275 810 dbSNP
rs1266825927 811 dbSNP
rs1465859954 813 dbSNP
rs782135189 823 dbSNP
rs781991063 824 dbSNP
rs1431030426 828 dbSNP
rs1200593972 832 dbSNP
rs1377943671 835 dbSNP
rs782421084 836 dbSNP
rs143241513 839 dbSNP
rs892812672 841 dbSNP
rs1457713395 842 dbSNP
rs1321224075 843 dbSNP
rs201599327 848 dbSNP
rs782670986 848 dbSNP
rs1325834259 851 dbSNP
rs1332009940 863 dbSNP
rs1001469886 866 dbSNP
rs550103791 869 dbSNP
rs1331767857 879 dbSNP
rs1229557165 882 dbSNP
rs369605712 886 dbSNP
rs149205327 895 dbSNP
rs782480271 899 dbSNP
rs949498266 904 dbSNP
rs782152112 905 dbSNP
rs1267690506 938 dbSNP
rs782620890 959 dbSNP
rs1436999623 961 dbSNP
rs1179674290 971 dbSNP
rs1413907200 980 dbSNP
rs375377534 981 dbSNP
rs781937622 991 dbSNP
rs1164153971 997 dbSNP
rs1367942968 999 dbSNP
rs1036414181 1001 dbSNP
rs1456491873 1011 dbSNP
rs1165218310 1012 dbSNP
rs1391799999 1057 dbSNP
rs1409459659 1062 dbSNP
rs781816515 1080 dbSNP
rs1352751946 1083 dbSNP
rs1410928672 1085 dbSNP
rs909236928 1091 dbSNP
rs986329992 1102 dbSNP
rs953685328 1104 dbSNP
rs1319396097 1118 dbSNP
rs1246418108 1119 dbSNP
rs1265524910 1122 dbSNP
rs782691752 1131 dbSNP
rs1338265903 1136 dbSNP
rs1202625840 1137 dbSNP
rs1253642790 1139 dbSNP
rs923428045 1144 dbSNP
rs1187098025 1145 dbSNP
rs1254079276 1147 dbSNP
rs976314118 1151 dbSNP
rs782222306 1154 dbSNP
rs782161838 1161 dbSNP
rs1429306207 1171 dbSNP
rs879957383 1175 dbSNP
rs1166977752 1182 dbSNP
rs1372779613 1196 dbSNP
rs1011341907 1197 dbSNP
rs1302759434 1220 dbSNP
rs782383392 1221 dbSNP
rs1034038786 1224 dbSNP
rs1398322886 1230 dbSNP
rs1312750942 1231 dbSNP
rs1001844350 1235 dbSNP
rs907151477 1237 dbSNP
rs1363871267 1239 dbSNP
rs186659650 1249 dbSNP
rs535221153 1257 dbSNP
rs782795880 1267 dbSNP
rs1209975839 1271 dbSNP
rs1484160401 1273 dbSNP
rs1182397210 1296 dbSNP
rs1256900368 1304 dbSNP
rs1448977741 1306 dbSNP
rs782098355 1314 dbSNP
rs1186879999 1328 dbSNP
rs782243274 1334 dbSNP
rs1450333286 1343 dbSNP
rs182331067 1353 dbSNP
rs1036383163 1367 dbSNP
rs942145444 1380 dbSNP
rs1467995056 1386 dbSNP
rs1303974447 1387 dbSNP
rs1387249171 1391 dbSNP
rs1432333362 1399 dbSNP
rs1299356905 1442 dbSNP
rs909205934 1447 dbSNP
rs1050423498 1448 dbSNP
rs1218290416 1474 dbSNP
rs1298854997 1483 dbSNP
rs1313767898 1506 dbSNP
rs1210686114 1510 dbSNP
rs1267475690 1515 dbSNP
rs1464499917 1519 dbSNP
rs190843472 1529 dbSNP
rs145404818 1567 dbSNP
rs782666352 1575 dbSNP
rs976746911 1655 dbSNP
rs1190865352 1661 dbSNP
rs967541622 1666 dbSNP
rs782026778 1679 dbSNP
rs1435331143 1680 dbSNP
rs1177408526 1705 dbSNP
rs782394644 1713 dbSNP
rs1456116270 1727 dbSNP
rs1321902676 1729 dbSNP
rs1388758137 1754 dbSNP
rs1435257097 1756 dbSNP
rs1291468004 1764 dbSNP
rs1369432374 1775 dbSNP
rs1219644011 1787 dbSNP
rs782254523 1788 dbSNP
rs989879201 1807 dbSNP
rs1326925092 1808 dbSNP
rs782620095 1817 dbSNP
rs1034007406 1832 dbSNP
rs1317639546 1833 dbSNP
rs35134132 1838 dbSNP
rs1221085275 1840 dbSNP
rs782494481 1852 dbSNP
rs1200514674 1866 dbSNP
rs879972464 1866 dbSNP
rs879987259 1866 dbSNP
rs1471867956 1871 dbSNP
rs1412018825 1880 dbSNP
rs1404292494 1885 dbSNP
rs1162238144 1887 dbSNP
rs782221359 1895 dbSNP
rs782592501 1896 dbSNP
rs1351196019 1901 dbSNP
rs1436772232 1902 dbSNP
rs1307130985 1909 dbSNP
rs1288967816 1918 dbSNP
rs1348437681 1918 dbSNP
rs782243828 1918 dbSNP
rs879994827 1918 dbSNP
rs1287818342 1919 dbSNP
rs1323669199 1927 dbSNP
rs1223527431 1932 dbSNP
rs979752350 1947 dbSNP
rs1482300147 1955 dbSNP
rs187877073 1971 dbSNP
rs1024198090 1972 dbSNP
rs1472173454 1985 dbSNP
rs994511299 2006 dbSNP
rs781904830 2015 dbSNP
rs1415364373 2020 dbSNP
rs1405555669 2029 dbSNP
rs896976361 2046 dbSNP
rs1016754419 2059 dbSNP
rs1167620937 2064 dbSNP
rs1006256591 2073 dbSNP
rs376590351 2089 dbSNP
rs1431462575 2102 dbSNP
rs7880501 2112 dbSNP
rs1339735093 2114 dbSNP
rs1445752137 2121 dbSNP
rs1282451940 2126 dbSNP
rs1381468744 2128 dbSNP
rs1246945255 2133 dbSNP
rs1297200389 2142 dbSNP
rs1340459398 2144 dbSNP
rs1207817833 2147 dbSNP
rs1274170922 2148 dbSNP
rs931965095 2149 dbSNP
rs1442303673 2152 dbSNP
rs1208684812 2159 dbSNP
rs901852674 2160 dbSNP
rs1444769837 2167 dbSNP
rs1187527448 2169 dbSNP
rs1388009472 2170 dbSNP
rs782515881 2175 dbSNP
rs1450950646 2189 dbSNP
rs1168223848 2206 dbSNP
rs1401261110 2234 dbSNP
rs782565211 2242 dbSNP
rs1412646048 2243 dbSNP
rs1336134486 2247 dbSNP
rs112873667 2266 dbSNP
rs111718249 2267 dbSNP
rs1453543036 2268 dbSNP
rs184202587 2269 dbSNP
rs1363206916 2276 dbSNP
rs1230922180 2285 dbSNP
rs946314258 2307 dbSNP
rs782717923 2318 dbSNP
rs1344804066 2332 dbSNP
rs913389373 2333 dbSNP
rs1217958281 2346 dbSNP
rs1281423051 2350 dbSNP
rs990349956 2370 dbSNP
rs141734057 2378 dbSNP
rs191508356 2382 dbSNP
rs1245681586 2391 dbSNP
rs782783662 2393 dbSNP
rs1465936229 2394 dbSNP
rs971064931 2402 dbSNP
rs1024416163 2418 dbSNP
rs1376821657 2420 dbSNP
rs1476946394 2440 dbSNP
rs1174230031 2477 dbSNP
rs782552215 2479 dbSNP
rs1456640007 2509 dbSNP
rs1319900987 2541 dbSNP
rs1386588925 2551 dbSNP
rs781889218 2556 dbSNP
rs1437512569 2572 dbSNP
rs1319289131 2592 dbSNP
rs781920175 2602 dbSNP
rs972664357 2603 dbSNP
rs961312695 2605 dbSNP
rs1276978445 2615 dbSNP
rs1324825901 2615 dbSNP
rs1016723395 2619 dbSNP
rs1228341867 2624 dbSNP
rs1265651245 2628 dbSNP
rs1330652908 2637 dbSNP
rs1005301015 2639 dbSNP
rs1266300194 2646 dbSNP
rs782805376 2646 dbSNP
rs1449648518 2647 dbSNP
rs1200645581 2660 dbSNP
rs1269344131 2666 dbSNP
rs1472202745 2672 dbSNP
rs1156912339 2701 dbSNP
rs1409825498 2708 dbSNP
rs889621860 2715 dbSNP
rs1159363669 2717 dbSNP
rs1390206206 2728 dbSNP
rs1385324270 2743 dbSNP
rs782143691 2746 dbSNP
rs1305290391 2756 dbSNP
rs1346574190 2778 dbSNP
rs1029048340 2791 dbSNP
rs1409717934 2794 dbSNP
rs996682230 2814 dbSNP
rs901824419 2832 dbSNP
rs1040805896 2843 dbSNP
rs1287055131 2847 dbSNP
rs1351784147 2848 dbSNP
rs1239219009 2858 dbSNP
rs946271937 2871 dbSNP
rs1353746055 2876 dbSNP
rs1211284851 2884 dbSNP
rs1292195524 2890 dbSNP
rs1482635865 2897 dbSNP
rs1179914076 2903 dbSNP
rs892092293 2905 dbSNP
rs781995181 2923 dbSNP
rs1419607964 2934 dbSNP
rs1182543786 2941 dbSNP
rs1367991321 2941 dbSNP
rs1054720362 2963 dbSNP
rs1165749942 3006 dbSNP
rs1366558076 3012 dbSNP
rs1429577287 3013 dbSNP
rs1306710784 3028 dbSNP
rs1399175569 3041 dbSNP
rs1392489701 3042 dbSNP
rs1311320310 3058 dbSNP
rs936126132 3065 dbSNP
rs1247693646 3073 dbSNP
rs782374036 3087 dbSNP
rs1315380667 3105 dbSNP
rs927473198 3126 dbSNP
rs187074476 3147 dbSNP
rs1202680862 3171 dbSNP
rs1276530057 3190 dbSNP
rs1480890295 3191 dbSNP
rs1199834543 3193 dbSNP
rs949869749 3201 dbSNP
rs1255518242 3212 dbSNP
rs1422187004 3213 dbSNP
rs1185639317 3229 dbSNP
rs1386169906 3230 dbSNP
rs916916904 3234 dbSNP
rs972852492 3239 dbSNP
rs961033640 3252 dbSNP
rs1462907067 3255 dbSNP
rs1302827628 3256 dbSNP
rs909766618 3266 dbSNP
rs1399419337 3270 dbSNP
rs781958811 3289 dbSNP
rs782336098 3299 dbSNP
rs1336825908 3309 dbSNP
rs953856150 3314 dbSNP
rs1225755783 3321 dbSNP
rs1028597358 3327 dbSNP
rs879975997 3336 dbSNP
rs1307898885 3337 dbSNP
rs996261474 3344 dbSNP
rs1232411723 3349 dbSNP
rs1254237720 3367 dbSNP
rs1482314513 3374 dbSNP
rs782717205 3375 dbSNP
rs1243834278 3387 dbSNP
rs782055001 3447 dbSNP
rs181166911 3458 dbSNP
rs1422072912 3464 dbSNP
rs1429545516 3465 dbSNP
rs1175977334 3479 dbSNP
rs1376364304 3490 dbSNP
rs1471250812 3498 dbSNP
rs1176458651 3513 dbSNP
rs1387319738 3523 dbSNP
rs1432405034 3528 dbSNP
rs782728688 3589 dbSNP
rs1362380919 3600 dbSNP
rs1054691827 3613 dbSNP
rs1386070949 3626 dbSNP
rs1298927323 3634 dbSNP
rs1325518354 3637 dbSNP
rs782127330 3668 dbSNP
rs1224068096 3699 dbSNP
rs1263787296 3699 dbSNP
rs782684259 3731 dbSNP
rs1213895213 3739 dbSNP
rs1244123947 3748 dbSNP
rs1486321632 3749 dbSNP
rs1190917987 3780 dbSNP
rs1265735749 3784 dbSNP
rs782407709 3798 dbSNP
rs1177840468 3809 dbSNP
rs1410552271 3811 dbSNP
rs1455239521 3817 dbSNP
rs1160835400 3835 dbSNP
rs1000474820 3865 dbSNP
rs782262707 3875 dbSNP
rs782433985 3883 dbSNP
rs1291520642 3886 dbSNP
rs949829353 3900 dbSNP
rs916948325 3910 dbSNP
rs1036746654 3911 dbSNP
rs782267248 3932 dbSNP
rs909568552 3947 dbSNP
rs1405445859 3957 dbSNP
rs983982651 3959 dbSNP
rs954126412 3965 dbSNP
rs921097912 3966 dbSNP
rs190177329 3983 dbSNP
rs184927938 3984 dbSNP
rs1317694641 4025 dbSNP
rs781929891 4026 dbSNP
rs1290008235 4027 dbSNP
rs1490957567 4035 dbSNP
rs1200763504 4065 dbSNP
rs1251810423 4119 dbSNP
rs1471899180 4124 dbSNP
rs1178371440 4125 dbSNP
rs1408096870 4132 dbSNP
rs1422835085 4135 dbSNP
rs1019417819 4139 dbSNP
rs1162305125 4151 dbSNP
rs782307978 4152 dbSNP
rs1425143246 4166 dbSNP
rs1307188785 4175 dbSNP
rs1368573463 4213 dbSNP
rs1444325640 4215 dbSNP
rs782227772 4222 dbSNP
rs1281313628 4236 dbSNP
rs781804301 4237 dbSNP
rs1227939648 4239 dbSNP
rs1000440496 4249 dbSNP
rs1313263122 4263 dbSNP
rs1362033177 4272 dbSNP
rs1223598745 4277 dbSNP
rs371075267 4284 dbSNP
rs1436524758 4285 dbSNP
rs1232920041 4293 dbSNP
rs1482669701 4296 dbSNP
rs1181369665 4304 dbSNP
rs1386639098 4324 dbSNP
rs1444882860 4332 dbSNP
rs1167680441 4341 dbSNP
rs1388123781 4366 dbSNP
rs906144945 4392 dbSNP
rs1329518639 4397 dbSNP
rs1355175807 4411 dbSNP
rs1044652093 4429 dbSNP
rs1014801153 4430 dbSNP
rs1247017373 4437 dbSNP
rs1385188459 4437 dbSNP
rs1297268563 4438 dbSNP
rs782568832 4441 dbSNP
rs782551192 4444 dbSNP
rs1337896860 4452 dbSNP
rs1216806372 4457 dbSNP
rs896001895 4465 dbSNP
rs1201173830 4468 dbSNP
rs1244473067 4470 dbSNP
rs1461460910 4487 dbSNP
rs1187584365 4493 dbSNP
rs1036719953 4518 dbSNP
rs781884786 4527 dbSNP
rs782773624 4528 dbSNP
rs782112719 4531 dbSNP
rs1424293351 4533 dbSNP
rs781833978 4540 dbSNP
rs1468180459 4541 dbSNP
rs1174307062 4547 dbSNP
rs1408424160 4558 dbSNP
rs1453608755 4587 dbSNP
rs1320197159 4599 dbSNP
rs1325033037 4603 dbSNP
rs782727427 4605 dbSNP
rs1271155530 4620 dbSNP
rs1048084855 4623 dbSNP
rs1222261445 4629 dbSNP
rs1264426794 4638 dbSNP
rs932583384 4638 dbSNP
rs921141578 4644 dbSNP
rs976705026 4646 dbSNP
rs1207698807 4670 dbSNP
rs782070633 4684 dbSNP
rs1281791405 4699 dbSNP
rs1448371545 4703 dbSNP
rs1193560503 4713 dbSNP
rs943845238 4719 dbSNP
rs913760251 4723 dbSNP
rs1245933063 4728 dbSNP
rs17276658 4732 dbSNP
rs1201547479 4734 dbSNP
rs1431508996 4765 dbSNP
rs1470375897 4810 dbSNP
rs1158205534 4812 dbSNP
rs1382995439 4812 dbSNP
rs782510906 4816 dbSNP
rs1319350848 4829 dbSNP
rs782297293 4835 dbSNP
rs782430374 4836 dbSNP
rs1403613642 4841 dbSNP
rs180859841 4850 dbSNP
rs1345591383 4854 dbSNP
rs1227172120 4873 dbSNP
rs1258445397 4878 dbSNP
rs782467026 4880 dbSNP
rs978717337 4889 dbSNP
rs782005302 4902 dbSNP
rs1205387073 4903 dbSNP
rs970089488 4927 dbSNP
rs1224608400 4930 dbSNP
rs1489811621 4930 dbSNP
rs1269600919 4943 dbSNP
rs1023611910 4947 dbSNP
rs1181119166 4971 dbSNP
rs782379079 4979 dbSNP
rs1014528738 4980 dbSNP
rs895955912 4990 dbSNP
rs1015745354 4993 dbSNP
rs781791926 5007 dbSNP
rs1365327357 5009 dbSNP
rs1423209257 5019 dbSNP
rs1305347362 5027 dbSNP
rs782749564 5048 dbSNP
rs1366668903 5052 dbSNP
rs888237019 5057 dbSNP
rs1304183318 5079 dbSNP
rs1337059204 5109 dbSNP
rs1239282343 5127 dbSNP
rs1283293323 5138 dbSNP
rs1356998717 5165 dbSNP
rs1247809860 5174 dbSNP
rs1292259036 5181 dbSNP
rs1482666837 5201 dbSNP
rs1194048849 5203 dbSNP
rs1048135328 5207 dbSNP
rs1439691877 5222 dbSNP
rs1182794773 5232 dbSNP
rs1384771333 5237 dbSNP
rs782464757 5247 dbSNP
rs1165807708 5252 dbSNP
rs781872444 5255 dbSNP
rs782761755 5266 dbSNP
rs1386280435 5294 dbSNP
rs1461892950 5296 dbSNP
rs1297006026 5297 dbSNP
rs1335498538 5310 dbSNP
rs1380061382 5310 dbSNP
rs200378539 5310 dbSNP
rs374015764 5310 dbSNP
rs1247760970 5311 dbSNP
rs1315440056 5325 dbSNP
rs1341262328 5333 dbSNP
rs782160418 5338 dbSNP
rs1253075467 5347 dbSNP
rs1339999293 5351 dbSNP
rs868921755 5385 dbSNP
rs188345833 5391 dbSNP
rs1196399342 5395 dbSNP
rs1242631946 5406 dbSNP
rs899516114 5414 dbSNP
rs1185701107 5416 dbSNP
rs184676612 5455 dbSNP
rs1244104845 5463 dbSNP
rs111269018 5487 dbSNP
rs1168946206 5498 dbSNP
rs943996745 5498 dbSNP
rs1375216885 5502 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acucuguccAAGU--ACGACGAUa 5'
                   ||:|  |||||||| 
Target 5' -------uuUUUAACUGCUGCUAu 3'
1 - 17
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000375169.3 | 3UTR | UUUUUAACUGCUGCUAUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
180 hsa-miR-4524a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055251 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT055826 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT060573 CCND1 cyclin D1 2 2
MIRT061013 C1ORF21 chromosome 1 open reading frame 21 2 6
MIRT064694 CCND2 cyclin D2 2 4
MIRT075268 SNTB2 syntrophin beta 2 2 4
MIRT079668 NAPG NSF attachment protein gamma 2 12
MIRT081651 CCNE1 cyclin E1 2 4
MIRT082996 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT083463 RALGAPB Ral GTPase activating protein non-catalytic beta subunit 2 4
MIRT085755 RIF1 replication timing regulatory factor 1 2 2
MIRT086022 UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 2 2
MIRT087431 ZNRF3 zinc and ring finger 3 2 2
MIRT088786 SOCS5 suppressor of cytokine signaling 5 2 2
MIRT089221 ACTR2 ARP2 actin related protein 2 homolog 2 2
MIRT093696 PI4K2B phosphatidylinositol 4-kinase type 2 beta 2 6
MIRT095090 SEC24A SEC24 homolog A, COPII coat complex component 2 4
MIRT096249 CANX calnexin 2 2
MIRT100215 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 2 2
MIRT100746 VEGFA vascular endothelial growth factor A 2 12
MIRT100904 CD2AP CD2 associated protein 2 2
MIRT102647 UBN2 ubinuclein 2 2 10
MIRT103882 FOXK1 forkhead box K1 2 2
MIRT104246 DMTF1 cyclin D binding myb like transcription factor 1 2 2
MIRT106310 ZFHX4 zinc finger homeobox 4 2 6
MIRT107696 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT114943 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT117671 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT133799 SKI SKI proto-oncogene 2 2
MIRT140167 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT142279 DCTN5 dynactin subunit 5 2 8
MIRT143288 N4BP1 NEDD4 binding protein 1 2 2
MIRT165939 CREBRF CREB3 regulatory factor 2 2
MIRT175251 PSAT1 phosphoserine aminotransferase 1 2 6
MIRT186381 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT191470 PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A 2 2
MIRT196480 TAOK1 TAO kinase 1 2 2
MIRT201470 SNRPB2 small nuclear ribonucleoprotein polypeptide B2 2 8
MIRT204615 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 8
MIRT204646 MOB4 MOB family member 4, phocein 2 8
MIRT204749 BZW1 basic leucine zipper and W2 domains 1 2 12
MIRT206031 NUP50 nucleoporin 50 2 6
MIRT211196 FGF2 fibroblast growth factor 2 2 4
MIRT229353 ZNF449 zinc finger protein 449 2 2
MIRT247138 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT249461 ZNF691 zinc finger protein 691 2 4
MIRT256314 CDC42SE2 CDC42 small effector 2 2 2
MIRT258419 WIPI2 WD repeat domain, phosphoinositide interacting 2 2 2
MIRT265083 CHEK1 checkpoint kinase 1 2 2
MIRT270561 SETD1B SET domain containing 1B 2 2
MIRT274749 RAB3IP RAB3A interacting protein 2 2
MIRT277515 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 4
MIRT289642 CBX2 chromobox 2 2 2
MIRT301001 MTMR3 myotubularin related protein 3 2 2
MIRT307149 CTDSPL CTD small phosphatase like 2 4
MIRT309021 USP53 ubiquitin specific peptidase 53 2 2
MIRT314100 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 2 8
MIRT319338 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT320619 ZNRF2 zinc and ring finger 2 2 2
MIRT324285 LURAP1L leucine rich adaptor protein 1 like 2 2
MIRT446498 ASCC1 activating signal cointegrator 1 complex subunit 1 2 2
MIRT448437 TLL1 tolloid like 1 2 2
MIRT461537 ACTR3B ARP3 actin related protein 3 homolog B 2 2
MIRT463162 ZNF367 zinc finger protein 367 2 10
MIRT463493 ZC3H10 zinc finger CCCH-type containing 10 2 2
MIRT465154 TSC22D2 TSC22 domain family member 2 2 2
MIRT466418 TFAP2A transcription factor AP-2 alpha 2 8
MIRT468278 SFT2D2 SFT2 domain containing 2 2 2
MIRT469399 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT471941 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT473688 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT479618 CDC25A cell division cycle 25A 2 2
MIRT482098 AKT3 AKT serine/threonine kinase 3 2 4
MIRT483995 ATAD5 ATPase family, AAA domain containing 5 2 12
MIRT485205 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 8
MIRT498763 C3orf38 chromosome 3 open reading frame 38 2 8
MIRT498961 ORC4 origin recognition complex subunit 4 2 8
MIRT499440 ODF2L outer dense fiber of sperm tails 2 like 2 8
MIRT500080 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 8
MIRT500305 ZNF622 zinc finger protein 622 2 8
MIRT500410 ZMAT3 zinc finger matrin-type 3 2 8
MIRT500789 TLK1 tousled like kinase 1 2 6
MIRT500930 SRPR SRP receptor alpha subunit 2 6
MIRT500943 SREK1 splicing regulatory glutamic acid and lysine rich protein 1 2 8
MIRT501068 SMAD7 SMAD family member 7 2 8
MIRT501711 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT502627 DDX3X DEAD-box helicase 3, X-linked 2 8
MIRT502910 CDCA4 cell division cycle associated 4 2 8
MIRT502935 CDC37L1 cell division cycle 37 like 1 2 8
MIRT504531 ZNF620 zinc finger protein 620 2 6
MIRT505106 YTHDC1 YTH domain containing 1 2 6
MIRT505337 TMEM245 transmembrane protein 245 2 6
MIRT505383 TMEM100 transmembrane protein 100 2 2
MIRT505678 SESTD1 SEC14 and spectrin domain containing 1 2 6
MIRT506157 PLAG1 PLAG1 zinc finger 2 8
MIRT506183 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 6
MIRT506475 MYO5A myosin VA 2 6
MIRT506826 KIF23 kinesin family member 23 2 6
MIRT507160 GAS2L3 growth arrest specific 2 like 3 2 2
MIRT507511 DYNLL2 dynein light chain LC8-type 2 2 4
MIRT507845 CCNE2 cyclin E2 2 6
MIRT510403 ZNF507 zinc finger protein 507 2 2
MIRT518078 TRIM35 tripartite motif containing 35 2 2
MIRT518982 NNT nicotinamide nucleotide transhydrogenase 2 4
MIRT521045 SLC2A3 solute carrier family 2 member 3 2 4
MIRT521190 SBNO1 strawberry notch homolog 1 2 6
MIRT522088 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT524846 ARPP19 cAMP regulated phosphoprotein 19 2 2
MIRT527787 TMEM44 transmembrane protein 44 2 4
MIRT537803 EFNB2 ephrin B2 2 4
MIRT540830 GNAT1 G protein subunit alpha transducin 1 2 4
MIRT541140 PISD phosphatidylserine decarboxylase 2 2
MIRT541419 CBX4 chromobox 4 2 2
MIRT543517 PRSS21 protease, serine 21 2 2
MIRT543824 GSG1 germ cell associated 1 2 2
MIRT544959 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 2
MIRT545179 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 4
MIRT545335 CCDC83 coiled-coil domain containing 83 2 2
MIRT545518 RSL24D1 ribosomal L24 domain containing 1 2 2
MIRT545670 DECR1 2,4-dienoyl-CoA reductase 1 2 2
MIRT545931 ZBTB44 zinc finger and BTB domain containing 44 2 4
MIRT546102 USP48 ubiquitin specific peptidase 48 2 4
MIRT546598 SALL1 spalt like transcription factor 1 2 4
MIRT546626 RTN4 reticulon 4 2 2
MIRT547651 KPNA3 karyopherin subunit alpha 3 2 2
MIRT547987 HCFC2 host cell factor C2 2 4
MIRT548717 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT548931 CDK17 cyclin dependent kinase 17 2 2
MIRT549067 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT549266 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT550460 OSCAR osteoclast associated, immunoglobulin-like receptor 2 4
MIRT550806 FAM229B family with sequence similarity 229 member B 2 2
MIRT552024 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT552334 ZNF704 zinc finger protein 704 2 2
MIRT552732 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT553795 SZRD1 SUZ RNA binding domain containing 1 2 4
MIRT554694 RNF149 ring finger protein 149 2 2
MIRT555133 PTPRD protein tyrosine phosphatase, receptor type D 2 2
MIRT555264 PRDM4 PR/SET domain 4 2 2
MIRT556848 KANK1 KN motif and ankyrin repeat domains 1 2 4
MIRT557474 GPR27 G protein-coupled receptor 27 2 4
MIRT558018 EXT1 exostosin glycosyltransferase 1 2 2
MIRT558498 CYP26B1 cytochrome P450 family 26 subfamily B member 1 2 4
MIRT558579 CREBL2 cAMP responsive element binding protein like 2 2 4
MIRT558610 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT558650 CNKSR3 CNKSR family member 3 2 2
MIRT558986 CA8 carbonic anhydrase 8 2 2
MIRT559141 BTN3A3 butyrophilin subfamily 3 member A3 2 2
MIRT559327 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 2 2
MIRT562021 LANCL1 LanC like 1 2 2
MIRT562869 KIAA1456 KIAA1456 2 2
MIRT563074 SLC25A12 solute carrier family 25 member 12 2 2
MIRT563496 DLGAP3 DLG associated protein 3 2 2
MIRT563890 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 2
MIRT564311 CCNT1 cyclin T1 2 2
MIRT564942 XKR7 XK related 7 2 2
MIRT564979 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT565423 TEF TEF, PAR bZIP transcription factor 2 2
MIRT566824 MAP3K7 mitogen-activated protein kinase kinase kinase 7 2 2
MIRT571961 KIF5B kinesin family member 5B 2 2
MIRT575877 Cask calcium/calmodulin-dependent serine protein kinase (MAGUK family) 2 3
MIRT576523 Txlna taxilin alpha 2 2
MIRT614693 TRAK1 trafficking kinesin protein 1 2 2
MIRT616065 ZC3H14 zinc finger CCCH-type containing 14 2 2
MIRT618838 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT624626 ATXN2 ataxin 2 2 2
MIRT624652 ASAH2 N-acylsphingosine amidohydrolase 2 2 2
MIRT640314 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT659248 CUL3 cullin 3 2 2
MIRT680972 DCAF17 DDB1 and CUL4 associated factor 17 2 2
MIRT682261 RS1 retinoschisin 1 2 2
MIRT682505 GLP2R glucagon like peptide 2 receptor 2 2
MIRT693904 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT699214 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT699373 SLC30A6 solute carrier family 30 member 6 2 2
MIRT699451 SLC16A9 solute carrier family 16 member 9 2 2
MIRT701230 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT702849 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT706163 CASK calcium/calmodulin dependent serine protein kinase 2 3
MIRT718990 UTP15 UTP15, small subunit processome component 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4524a-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-4524a-5p Cetuximab resistant tissue (colorectal carcinoma)

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