pre-miRNA Information
pre-miRNA hsa-mir-4524a   
Genomic Coordinates chr17: 69099564 - 69099632
Description Homo sapiens miR-4524a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4524a-5p
Sequence 6| AUAGCAGCAUGAACCUGUCUCA |27
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1322445998 8 dbSNP
rs1350790266 13 dbSNP
rs1263495678 21 dbSNP
Putative Targets

Gene Information
Gene Symbol TEF   
Synonyms -
Description TEF, PAR bZIP transcription factor
Transcript NM_001145398   
Other Transcripts NM_003216   
Expression
Putative miRNA Targets on TEF
3'UTR of TEF
(miRNA target sites are highlighted)
>TEF|NM_001145398|3'UTR
   1 CCCGTGCCCCCCGCCCGGGCGGGGTACTGCCTGCACCTCAGACCTCTGCCTGGGGGCTCCCTGTAACCCCTCACACGCGT
  81 GGAGACTTATGACTCGTCGTGGGCGCATGGCGGCGCACCTGCTGCAGGAGCGGCCACGTCTCAGCTTCATTATACCATGG
 161 CCTGCGCACGTGGCGACGTCCCTGAGGGGCCAGTCTCCTCACTGGTGGGGAACGCAAGAGAATCTGCGTAGATGGGTGAC
 241 TCAGCCTTAGTTTCTATTCTTGGATGTCCCAGTTGAATCAGAAGGGGACCTCTGGAGTACACACCTCTCTCCTGGGCGCT
 321 CAGGGTCCCTGGACTCTCCCTCAGTCTCCAGCCTGGGCTGCCGAGGGCTATCTCTGCAGAATGAGTTGTGATCATTGTCA
 401 CCCTATGTCTTCTCAGGTAGCAGGGCGCGTTTCCACTTAAGGTGTGTCTGTCACGCACCTCATTCTCCCCAGACAGTCTT
 481 TGAGTAACATCTGTTCCCATCTTCCTTGGAAGCAGGACACACCAGCTCCTCCGTCAGTGTCTGCATGGGTAGCAGGCTGC
 561 AGGAGTGGGGTCTCTGCACAGCCTGGGATGGGGCTTGGGGCTGGGGCCTGCAGCAGAAGTGTGCCCAGCGTTTCTCGGCT
 641 CCCGCACCCCTTTTCCCTTATGGCTCTGAGGCCATCGGCTGTCTCTGCATTTCATTGGCTGTGGAGGAGAGACTCCTAGG
 721 ATGGCTGCTGTCTGAGCCATGAGTGCCAGGGCTGAGAGAGGCCTCTTCATTTCCTCTCCAGGCTACTCAGAGGCCATGTG
 801 AAGCTCGTTTGTCCCACTAGACCAGGCCTCTGGGCCTGCTCTTTCTTTCCACCCAATGTCCAGTCTTGGATCATAGATTT
 881 AAAAGGAAAACCCCTCTTATCTAGGAGGCTTTAACTTCCTGGACCCCAGGATTCACCTTCCTAGTGGTGTTTAGAAAATG
 961 CCTCCACAGCCCCCTTCCACCATGGGCATGAGAGCTGGGGTGTGTTTCTTGAGAAGCTCCCTTTTTTCTTGCTCTGCTCA
1041 CCGGTGTGGCCTGGGCTGGAGTGCACTCTCCCTGGGGGCAGCTGGGGCCTCGCAATTCTTGCTTCAGGATCTCTCCCATG
1121 CGAGCTGCCCGGAGGGTGTCAGCAGGGCAAGACACCTAGTCTAGAGTCACCAAGGTCACAGTGCCACTTTCACGGGATAG
1201 CAGGCTCTTGGGACTTTTACACAGGCCTAGGGTCCCCTCAGTCTTGGTCCCAGGAGATGGGGGCCACTCGTGAGGCTGGC
1281 CATGCTGTGGCTTCTCACAGCTGTGGTCTCCCCTGCCTCACAACGACTCCTTTCTCTTGTGTGGCGGGACTCGCCCTTTT
1361 GCTGTGCTCAGAAGATTCACTGAGGAAACTCATGGAAGCCTCTGCTCATTTGGGTCACTGGGACACCCCTGAGATGGGTG
1441 TGTTTATTTGCTCAGGGCGGGCAGCCTATGGTGAAGAGGAGACAGAGGCGATGGGCGTGCTTCGTCCTCCGTAACACTGG
1521 CTTTATTTACCGTGGTGGTTCAGAGTCCCAGGCCCTGACCTCTAAAGACTTTTCATAACAGACGTTAAGACCAAGCCGTG
1601 GACCTCACCCCAGGGGAATGCCACGGCCCTTTGGGGACCTGCACACCCACCTCTCCGGGGGACTTGACAAGGGGCCCTGA
1681 GGCCAAGGGAGGTCACTCCTCCCTCCAGGCCCCTGACTTTTACTTTGTGGTTCTCTAAAAACCATGTACACACTTTCACT
1761 CTATTGTAACCACACAGGGCAGGCGCATCCAGCATGTCAGTGTCCTGCCCCGGGCAGCTCTCCCTCCCGGGCACGCTCCC
1841 TCTGGCCTGGTGGATCACCAAGAGGGCGGTTCTCATTTTGTTATTAGTGGAAGAGCCTTGAGCTTAAAAGCTCTTCATTT
1921 TCTTTGCCGGAAAGTATATGGTTTGTGTTTTTGCAGTTTTATTTTTTTAAGGATGGACACTAAATCTCTGGTGTCCATGT
2001 TCCGAGCCCGGTGGCTGGGATGGTGGCTCGATGTGTCTCCTCTTTATCCCGCCCTCTGCCTGTTTGGTGCCCTCCCTTCT
2081 TTCCCCCAGGCAGTGGGTATCGGGTTCTTTCCCAAAGTGCTTACTTGGAAAGAGTGTGGCTGCTGGACTCTTTTCGAAAT
2161 GCCCCTCTGAGTCAGGAGCCTGGTGGGGACAAGATGGAGGATGTCCACAGAGGCTGACCTGTGGGGGAAAAGAAGTGCTC
2241 AGGTAAGGTTGTCTCCTCTCCTGTCCTAAAAAAATCCATGCTTGCAGGAGAGGGTTGGTGCCTGCTCAGTTTCTGTCGAG
2321 GGAATGGGAGTCTCCTCGGCTCCCTCCTGGGCCCTCTGCTTCTTGGAGGCCGACCGCTGGAGACTGCGGCTCCTGTGCTT
2401 GGATCTTTGACATCTGTCAGTCACTGGAGGCTAGAGAAGTTGACTTTACCTTGGCTTTCTGTGGGTTCCCGATGGGCTTG
2481 GAAGTGCCGTCTACTTCCTAAGCATCCTGTCTAAAGCTTTGTGGCACCCTCAGTGCAACCTCAGAACAGACAAATCATGA
2561 ATGAGCTGGAACTTTGCAAGAATATTCATATTATAAATGTCTCATCTGATGGAGGAACGTGTGCATTTAGAGAGAGGGAG
2641 AGTTTTCAAGGTTTATGGCAACTTTGTGGAGGACCTGGGTAACTCTTACCCTTGGCCAAAGGAAGAGGTTTTCCTGTCTG
2721 GCTTCTGAGGTTGGAGGGGGCACTTAGCAGTGAACCTTAAGTCTGGGTACATGTAACCCTGCTGAGGGGCTGTGCAGGCC
2801 GCTCCTACGGTCCTTTGGCCTGAGGCAGGGCGGGAGGCATGCAAGCCAGTGGGGGAAAACCCCTCTGAAGCTGGGCAGCC
2881 CTCTACCTGGGCCCCGGGAGCCGTGCTCCTTGGAACGCAAAGGGCCGAGGAGCATCTGGTTTTCATGGCAAAGCTCTACT
2961 CCAGAGCTCCTTTAACATCTGCTAATTAAGTGCAATAAATTTTTCTAGAAAATGGCAAAGATGACTTCCAGGTGGATATT
3041 GCTCTCTTACGGTGTTGGGGATGCCAGAACACCACTTGGTTTTATTTTTCTAAGTGCATGTGATGTGATAGAGTGTGTGG
3121 GGCTCTGTGTCCTTCCCTGGGAGCTGGCATTCCAGCGGGCCCCTCTCTTTACCTTTGTTGGGGGAAGGAGGCAAGAGAGA
3201 AATTCCTTCTTCCCAGCCAGAGAGGGCAGAAGCAGACCGTAGCCCATTGGCCTTATGTGCGTGTGTGCGTGCGAGTGTGT
3281 CACTGCTGGTGGGCCGGAGTGATGTGGTGGGAGGGAAGCCGGGAATGTATCCTTTTCAGACAAAATTAAATATTTTGAAA
3361 TGAGAATGAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acUCUG----UCCAAGUA-CGACGAUa 5'
            ||||    |||   || ||||||: 
Target 5' agAGACTCCTAGG---ATGGCTGCTGt 3'
708 - 731 135.00 -18.20
2
miRNA  3' acUCUGUC-CAAGUACGACGAUa 5'
            :|| || || :: ||||||: 
Target 5' ttGGAAAGAGTGTG-GCTGCTGg 3'
2125 - 2146 135.00 -12.30
3
miRNA  3' acucuguccaaguacGACGAUa 5'
                         |||||| 
Target 5' gagctcctttaacatCTGCTAa 3'
2964 - 2985 120.00 -8.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30470144 3 COSMIC
COSN30135915 5 COSMIC
COSN30460894 16 COSMIC
COSN30530705 57 COSMIC
COSN28858200 67 COSMIC
COSN30132115 77 COSMIC
COSN31600838 78 COSMIC
COSN32065263 534 COSMIC
COSN24328490 614 COSMIC
COSN28700956 1285 COSMIC
COSN28701303 1286 COSMIC
COSN30202898 1361 COSMIC
COSN31585413 1379 COSMIC
COSN15338042 1400 COSMIC
COSN28788504 1432 COSMIC
COSN32056896 1451 COSMIC
COSN31489583 1496 COSMIC
COSN15662908 1532 COSMIC
COSN10030794 1548 COSMIC
COSN26531286 1659 COSMIC
COSN9166391 2488 COSMIC
COSN31492955 2510 COSMIC
COSN1899460 2649 COSMIC
COSN28826574 2719 COSMIC
COSN30544402 3035 COSMIC
COSN30544401 3036 COSMIC
COSN14446994 3093 COSMIC
COSN30544395 3103 COSMIC
COSN30163436 3112 COSMIC
COSN31602612 3117 COSMIC
COSN31484957 3136 COSMIC
COSN26637331 3178 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1173855552 1 dbSNP
rs749362969 4 dbSNP
rs1210565844 5 dbSNP
rs758494386 7 dbSNP
rs777880975 7 dbSNP
rs202206583 9 dbSNP
rs1034124077 10 dbSNP
rs371864233 13 dbSNP
rs746375610 14 dbSNP
rs772368737 17 dbSNP
rs189575842 18 dbSNP
rs747442496 19 dbSNP
rs769460139 21 dbSNP
rs201416132 22 dbSNP
rs1316948200 23 dbSNP
rs570599829 25 dbSNP
rs1398475124 27 dbSNP
rs2234062 27 dbSNP
rs1172837789 32 dbSNP
rs1253208680 37 dbSNP
rs952557049 40 dbSNP
rs1190431926 43 dbSNP
rs1479904995 49 dbSNP
rs371116090 50 dbSNP
rs774286590 51 dbSNP
rs759532280 53 dbSNP
rs1275544993 57 dbSNP
rs965473641 60 dbSNP
rs976516843 61 dbSNP
rs1444230406 62 dbSNP
rs920953643 64 dbSNP
rs1200144231 68 dbSNP
rs932332105 69 dbSNP
rs1277128669 73 dbSNP
rs745306513 77 dbSNP
rs989764679 78 dbSNP
rs1268966046 79 dbSNP
rs915457265 80 dbSNP
rs1341794985 82 dbSNP
rs1334384739 90 dbSNP
rs945545881 91 dbSNP
rs1042550130 92 dbSNP
rs1373247636 94 dbSNP
rs1478299597 96 dbSNP
rs565496682 97 dbSNP
rs1418655307 99 dbSNP
rs532595733 100 dbSNP
rs1016570816 105 dbSNP
rs939453595 106 dbSNP
rs550745234 108 dbSNP
rs963650721 112 dbSNP
rs1055211492 113 dbSNP
rs895169061 115 dbSNP
rs1447359945 116 dbSNP
rs994812375 117 dbSNP
rs568650954 120 dbSNP
rs535899304 125 dbSNP
rs112460788 132 dbSNP
rs566310711 139 dbSNP
rs1230586432 144 dbSNP
rs1357841740 146 dbSNP
rs1284209002 152 dbSNP
rs1232167692 154 dbSNP
rs1432078904 156 dbSNP
rs1327243333 162 dbSNP
rs1015411806 164 dbSNP
rs965224140 166 dbSNP
rs534116596 167 dbSNP
rs74503034 170 dbSNP
rs182267390 171 dbSNP
rs1365597031 173 dbSNP
rs187570422 175 dbSNP
rs1164239313 178 dbSNP
rs915508179 179 dbSNP
rs947995536 182 dbSNP
rs1183221867 213 dbSNP
rs1480501660 214 dbSNP
rs768479967 215 dbSNP
rs556391726 225 dbSNP
rs1452637222 228 dbSNP
rs1289824483 229 dbSNP
rs575809638 233 dbSNP
rs542712286 240 dbSNP
rs17002425 244 dbSNP
rs1372342156 247 dbSNP
rs368243386 260 dbSNP
rs143478818 270 dbSNP
rs1055623499 272 dbSNP
rs763176366 279 dbSNP
rs1350356734 280 dbSNP
rs895194347 283 dbSNP
rs766523599 287 dbSNP
rs1325184547 298 dbSNP
rs540599272 299 dbSNP
rs1459917211 301 dbSNP
rs192666274 305 dbSNP
rs1038553165 306 dbSNP
rs1418654679 310 dbSNP
rs1406082655 316 dbSNP
rs1193238696 317 dbSNP
rs1453342495 318 dbSNP
rs8136493 319 dbSNP
rs1049023843 325 dbSNP
rs1391686001 336 dbSNP
rs1212422678 340 dbSNP
rs550808241 361 dbSNP
rs1004110473 363 dbSNP
rs1208816727 368 dbSNP
rs1015464065 371 dbSNP
rs759722224 377 dbSNP
rs562702981 380 dbSNP
rs1406260040 385 dbSNP
rs529755234 395 dbSNP
rs998723003 398 dbSNP
rs1031941149 402 dbSNP
rs1367269210 404 dbSNP
rs957164150 404 dbSNP
rs1453177262 406 dbSNP
rs530369480 406 dbSNP
rs1367397256 407 dbSNP
rs915828589 417 dbSNP
rs1415385537 425 dbSNP
rs1028508919 427 dbSNP
rs953791026 428 dbSNP
rs1010647593 429 dbSNP
rs753291357 430 dbSNP
rs928092003 431 dbSNP
rs1485280425 432 dbSNP
rs1258555547 443 dbSNP
rs1211872266 449 dbSNP
rs1348318635 453 dbSNP
rs939449978 455 dbSNP
rs756541840 456 dbSNP
rs764571112 459 dbSNP
rs928202742 463 dbSNP
rs1298283692 465 dbSNP
rs1381687819 469 dbSNP
rs139035623 470 dbSNP
rs183662622 470 dbSNP
rs1304799593 472 dbSNP
rs1449120139 474 dbSNP
rs754195460 477 dbSNP
rs1208855293 479 dbSNP
rs1375078842 479 dbSNP
rs17002428 481 dbSNP
rs1391288017 490 dbSNP
rs1170416994 491 dbSNP
rs1427390700 496 dbSNP
rs990982415 497 dbSNP
rs1485760837 504 dbSNP
rs113140298 517 dbSNP
rs1208412954 519 dbSNP
rs916666072 521 dbSNP
rs1192040406 523 dbSNP
rs1483937416 526 dbSNP
rs767522447 527 dbSNP
rs533588750 533 dbSNP
rs552143589 534 dbSNP
rs1049118255 538 dbSNP
rs9623390 552 dbSNP
rs868289230 561 dbSNP
rs1412035919 564 dbSNP
rs538089911 571 dbSNP
rs556399903 578 dbSNP
rs778772911 582 dbSNP
rs558451509 589 dbSNP
rs60291178 589 dbSNP
rs1160496268 593 dbSNP
rs1031385292 600 dbSNP
rs1380536784 606 dbSNP
rs1416676822 608 dbSNP
rs1317986535 615 dbSNP
rs1483906499 621 dbSNP
rs1251064539 623 dbSNP
rs1195019045 625 dbSNP
rs1037365111 629 dbSNP
rs901050927 631 dbSNP
rs998439056 634 dbSNP
rs1049610672 637 dbSNP
rs4141433 638 dbSNP
rs1010698215 642 dbSNP
rs1230532707 644 dbSNP
rs1333829826 645 dbSNP
rs1306664930 647 dbSNP
rs1390049397 649 dbSNP
rs1393461732 650 dbSNP
rs1022043890 651 dbSNP
rs1022916079 657 dbSNP
rs1228951161 658 dbSNP
rs1461488652 659 dbSNP
rs1269878935 668 dbSNP
rs534969577 675 dbSNP
rs981356702 677 dbSNP
rs5758327 678 dbSNP
rs960703424 682 dbSNP
rs983272086 685 dbSNP
rs1204026966 686 dbSNP
rs1256486611 702 dbSNP
rs908633161 706 dbSNP
rs1443764594 716 dbSNP
rs1468083295 719 dbSNP
rs766764186 723 dbSNP
rs1271278339 731 dbSNP
rs1190093678 743 dbSNP
rs999150362 758 dbSNP
rs1351610067 759 dbSNP
rs779399604 766 dbSNP
rs941569083 769 dbSNP
rs565706013 770 dbSNP
rs921544225 774 dbSNP
rs1035700559 780 dbSNP
rs1304791432 784 dbSNP
rs1255879256 785 dbSNP
rs960961120 791 dbSNP
rs991469196 798 dbSNP
rs1475053522 802 dbSNP
rs1160563669 804 dbSNP
rs916781163 807 dbSNP
rs554794021 808 dbSNP
rs113993608 817 dbSNP
rs984874596 822 dbSNP
rs1157682973 827 dbSNP
rs1451336923 829 dbSNP
rs1379216448 833 dbSNP
rs1174030386 836 dbSNP
rs1453663296 837 dbSNP
rs1251084778 839 dbSNP
rs1451793978 849 dbSNP
rs907931987 851 dbSNP
rs1447694198 853 dbSNP
rs1158045361 856 dbSNP
rs940699209 864 dbSNP
rs1040345955 870 dbSNP
rs746989254 874 dbSNP
rs573271099 878 dbSNP
rs1281417197 880 dbSNP
rs923250255 887 dbSNP
rs933947430 893 dbSNP
rs188489608 896 dbSNP
rs558523554 901 dbSNP
rs577130148 906 dbSNP
rs1050104655 908 dbSNP
rs1354593331 918 dbSNP
rs746763485 918 dbSNP
rs889655272 919 dbSNP
rs1010708194 930 dbSNP
rs1317185365 931 dbSNP
rs1380099560 937 dbSNP
rs544469602 941 dbSNP
rs1022821122 964 dbSNP
rs905663649 968 dbSNP
rs902239625 970 dbSNP
rs1035571535 974 dbSNP
rs961032670 975 dbSNP
rs1372644278 977 dbSNP
rs1256040192 979 dbSNP
rs768523520 980 dbSNP
rs1258520350 983 dbSNP
rs1210565620 984 dbSNP
rs999613516 987 dbSNP
rs1484920392 991 dbSNP
rs1208301522 998 dbSNP
rs45530840 1003 dbSNP
rs138454762 1010 dbSNP
rs974105582 1018 dbSNP
rs1183338898 1019 dbSNP
rs1356930845 1021 dbSNP
rs921447193 1029 dbSNP
rs932801579 1033 dbSNP
rs542396401 1035 dbSNP
rs879248930 1036 dbSNP
rs1181674708 1037 dbSNP
rs1378304136 1040 dbSNP
rs560033046 1043 dbSNP
rs1330810098 1044 dbSNP
rs987462555 1046 dbSNP
rs1012541473 1050 dbSNP
rs1166185977 1051 dbSNP
rs1024300077 1052 dbSNP
rs934350938 1055 dbSNP
rs952222289 1062 dbSNP
rs984886011 1066 dbSNP
rs9611576 1069 dbSNP
rs576053140 1071 dbSNP
rs1044132740 1073 dbSNP
rs570420484 1074 dbSNP
rs531652859 1075 dbSNP
rs1193537796 1076 dbSNP
rs1394294536 1077 dbSNP
rs1390777365 1079 dbSNP
rs1301828997 1083 dbSNP
rs79136927 1085 dbSNP
rs1231441545 1086 dbSNP
rs1002705469 1087 dbSNP
rs1342407448 1089 dbSNP
rs767671044 1092 dbSNP
rs117000867 1093 dbSNP
rs1326823162 1096 dbSNP
rs1479835301 1113 dbSNP
rs1036052737 1118 dbSNP
rs1164307022 1119 dbSNP
rs1460014941 1120 dbSNP
rs537253736 1122 dbSNP
rs1004647151 1126 dbSNP
rs9611577 1127 dbSNP
rs1231646876 1128 dbSNP
rs1191813974 1129 dbSNP
rs1043551732 1131 dbSNP
rs566897461 1132 dbSNP
rs192887551 1135 dbSNP
rs1346406825 1142 dbSNP
rs1332159633 1150 dbSNP
rs1285954645 1151 dbSNP
rs577088282 1153 dbSNP
rs1372415293 1154 dbSNP
rs935542065 1155 dbSNP
rs576798075 1157 dbSNP
rs1442923747 1160 dbSNP
rs896188057 1163 dbSNP
rs540954662 1164 dbSNP
rs1023845401 1184 dbSNP
rs1438842679 1185 dbSNP
rs1461240488 1188 dbSNP
rs1347152038 1192 dbSNP
rs765672394 1194 dbSNP
rs1294113603 1197 dbSNP
rs1392783667 1199 dbSNP
rs986972733 1205 dbSNP
rs1006415171 1214 dbSNP
rs1324600481 1216 dbSNP
rs1015069565 1218 dbSNP
rs962519449 1219 dbSNP
rs989032208 1219 dbSNP
rs1315968081 1221 dbSNP
rs1281808815 1227 dbSNP
rs1230190264 1230 dbSNP
rs976225961 1235 dbSNP
rs1348447430 1236 dbSNP
rs1302631290 1240 dbSNP
rs1292927740 1241 dbSNP
rs1306129727 1242 dbSNP
rs1227146967 1250 dbSNP
rs1364242257 1251 dbSNP
rs556476809 1252 dbSNP
rs1030796223 1257 dbSNP
rs953405903 1261 dbSNP
rs71327132 1264 dbSNP
rs542106279 1267 dbSNP
rs946646243 1272 dbSNP
rs927057487 1273 dbSNP
rs559205525 1275 dbSNP
rs979326515 1277 dbSNP
rs923811678 1282 dbSNP
rs1172373638 1283 dbSNP
rs560692021 1297 dbSNP
rs1420940354 1298 dbSNP
rs1465362664 1301 dbSNP
rs1186602568 1304 dbSNP
rs1188513411 1305 dbSNP
rs1485311417 1311 dbSNP
rs1260627900 1313 dbSNP
rs1212712408 1314 dbSNP
rs1485903396 1318 dbSNP
rs1279506580 1323 dbSNP
rs1231064052 1326 dbSNP
rs1259911720 1326 dbSNP
rs1296316153 1330 dbSNP
rs780582344 1346 dbSNP
rs935155239 1351 dbSNP
rs1370163713 1352 dbSNP
rs527402110 1353 dbSNP
rs886250331 1354 dbSNP
rs1056225680 1366 dbSNP
rs1459839572 1369 dbSNP
rs1311591333 1370 dbSNP
rs1164073067 1377 dbSNP
rs896185341 1386 dbSNP
rs1463924787 1390 dbSNP
rs184623428 1391 dbSNP
rs1037547523 1393 dbSNP
rs898505957 1394 dbSNP
rs537662772 1395 dbSNP
rs769435179 1403 dbSNP
rs1420991041 1413 dbSNP
rs1189696231 1419 dbSNP
rs1475410319 1429 dbSNP
rs775166648 1438 dbSNP
rs995465839 1441 dbSNP
rs1198529580 1442 dbSNP
rs1044683459 1443 dbSNP
rs1481547339 1452 dbSNP
rs1251851415 1453 dbSNP
rs1203872297 1457 dbSNP
rs1316200150 1459 dbSNP
rs887424696 1459 dbSNP
rs1006467485 1460 dbSNP
rs1036564480 1469 dbSNP
rs897999844 1470 dbSNP
rs1310961678 1472 dbSNP
rs1393529729 1477 dbSNP
rs531358875 1491 dbSNP
rs998051303 1492 dbSNP
rs1298152581 1493 dbSNP
rs1030433252 1496 dbSNP
rs549786090 1497 dbSNP
rs1232021860 1498 dbSNP
rs1273038213 1504 dbSNP
rs1185094527 1505 dbSNP
rs989062018 1508 dbSNP
rs1176609592 1510 dbSNP
rs541816291 1511 dbSNP
rs968405299 1512 dbSNP
rs1218026824 1522 dbSNP
rs1214418215 1523 dbSNP
rs1021660997 1532 dbSNP
rs968706567 1533 dbSNP
rs561874096 1539 dbSNP
rs927059621 1552 dbSNP
rs1317958192 1555 dbSNP
rs1306907882 1556 dbSNP
rs979378957 1558 dbSNP
rs1445127173 1560 dbSNP
rs777845791 1562 dbSNP
rs1373844207 1565 dbSNP
rs779630694 1572 dbSNP
rs938466084 1576 dbSNP
rs1182627182 1579 dbSNP
rs1259383305 1580 dbSNP
rs112699091 1585 dbSNP
rs1161148796 1593 dbSNP
rs750967889 1595 dbSNP
rs754482118 1598 dbSNP
rs1364238185 1602 dbSNP
rs1158114943 1610 dbSNP
rs1437690798 1614 dbSNP
rs956569368 1619 dbSNP
rs1057257997 1625 dbSNP
rs907708982 1626 dbSNP
rs1412614154 1628 dbSNP
rs992379140 1630 dbSNP
rs1265518636 1639 dbSNP
rs1351677643 1648 dbSNP
rs1260447294 1654 dbSNP
rs917689212 1658 dbSNP
rs1350631188 1660 dbSNP
rs947818965 1671 dbSNP
rs1234358043 1672 dbSNP
rs1044789933 1674 dbSNP
rs1156286286 1689 dbSNP
rs111316642 1692 dbSNP
rs547276446 1703 dbSNP
rs565835178 1708 dbSNP
rs995488969 1709 dbSNP
rs1049769378 1711 dbSNP
rs889755602 1724 dbSNP
rs1304168464 1726 dbSNP
rs1008317751 1731 dbSNP
rs1453866754 1743 dbSNP
rs941665792 1746 dbSNP
rs1195433684 1753 dbSNP
rs1447749295 1754 dbSNP
rs892006950 1755 dbSNP
rs1010399162 1758 dbSNP
rs1293280715 1764 dbSNP
rs1036572654 1770 dbSNP
rs898045626 1774 dbSNP
rs997706319 1782 dbSNP
rs1052390733 1785 dbSNP
rs534057562 1786 dbSNP
rs1007688969 1788 dbSNP
rs1282658689 1789 dbSNP
rs552282004 1793 dbSNP
rs1284886796 1806 dbSNP
rs369520800 1809 dbSNP
rs149617949 1812 dbSNP
rs1021712652 1813 dbSNP
rs1252510634 1815 dbSNP
rs191248546 1816 dbSNP
rs781166186 1819 dbSNP
rs1175366877 1825 dbSNP
rs1406632494 1827 dbSNP
rs968716597 1829 dbSNP
rs371690118 1830 dbSNP
rs1400007025 1832 dbSNP
rs1169684222 1835 dbSNP
rs940562398 1836 dbSNP
rs1372698761 1860 dbSNP
rs973191533 1862 dbSNP
rs1476389998 1864 dbSNP
rs1175129986 1867 dbSNP
rs1187701607 1868 dbSNP
rs9623392 1869 dbSNP
rs1197007105 1870 dbSNP
rs1339549432 1871 dbSNP
rs931912059 1876 dbSNP
rs183822036 1882 dbSNP
rs1293628363 1885 dbSNP
rs992077607 1886 dbSNP
rs144380512 1891 dbSNP
rs1445017476 1892 dbSNP
rs969185477 1896 dbSNP
rs1168633552 1897 dbSNP
rs980496866 1904 dbSNP
rs908926463 1907 dbSNP
rs1181602294 1909 dbSNP
rs769620170 1913 dbSNP
rs1235086035 1919 dbSNP
rs1035956822 1929 dbSNP
rs1183248613 1930 dbSNP
rs563804158 1932 dbSNP
rs749634556 1936 dbSNP
rs918914807 1937 dbSNP
rs1305969854 1946 dbSNP
rs933592896 1958 dbSNP
rs1273471244 1969 dbSNP
rs769026505 1970 dbSNP
rs1227509237 1974 dbSNP
rs536107495 1980 dbSNP
rs904665561 1983 dbSNP
rs1281210686 1984 dbSNP
rs1001804254 1985 dbSNP
rs1376085624 1995 dbSNP
rs1329345068 2000 dbSNP
rs1443240871 2004 dbSNP
rs1052021638 2005 dbSNP
rs554085401 2010 dbSNP
rs992896771 2011 dbSNP
rs1439284526 2014 dbSNP
rs777394991 2030 dbSNP
rs943486427 2031 dbSNP
rs1469457888 2034 dbSNP
rs961787277 2036 dbSNP
rs1043165569 2043 dbSNP
rs1220461119 2044 dbSNP
rs904585248 2046 dbSNP
rs1449521330 2050 dbSNP
rs774877081 2051 dbSNP
rs998870495 2052 dbSNP
rs1032120001 2057 dbSNP
rs895813045 2063 dbSNP
rs931776219 2068 dbSNP
rs571632073 2070 dbSNP
rs911788775 2071 dbSNP
rs1168787593 2076 dbSNP
rs944079949 2087 dbSNP
rs1319345807 2089 dbSNP
rs1013954737 2094 dbSNP
rs1420686942 2102 dbSNP
rs5758328 2103 dbSNP
rs1041427977 2105 dbSNP
rs1425180279 2112 dbSNP
rs1190141677 2124 dbSNP
rs572569540 2135 dbSNP
rs189423209 2137 dbSNP
rs1321007804 2144 dbSNP
rs1024858664 2149 dbSNP
rs1354448722 2151 dbSNP
rs946129435 2151 dbSNP
rs969196930 2156 dbSNP
rs564200885 2157 dbSNP
rs1348518721 2161 dbSNP
rs1300739706 2164 dbSNP
rs1002107627 2166 dbSNP
rs182063822 2169 dbSNP
rs186870696 2172 dbSNP
rs896044205 2174 dbSNP
rs561677306 2176 dbSNP
rs529182807 2179 dbSNP
rs1341213138 2186 dbSNP
rs1358949698 2188 dbSNP
rs971819399 2202 dbSNP
rs1435947746 2209 dbSNP
rs1212580586 2220 dbSNP
rs961655216 2226 dbSNP
rs1174789451 2236 dbSNP
rs547641936 2243 dbSNP
rs918959446 2246 dbSNP
rs1322224979 2259 dbSNP
rs1027355581 2265 dbSNP
rs368890518 2268 dbSNP
rs533914607 2268 dbSNP
rs1189775632 2274 dbSNP
rs1250629260 2276 dbSNP
rs932995076 2286 dbSNP
rs746128054 2287 dbSNP
rs1309271604 2296 dbSNP
rs911834812 2316 dbSNP
rs536502910 2319 dbSNP
rs1188810411 2325 dbSNP
rs368940318 2328 dbSNP
rs943535760 2334 dbSNP
rs1043219124 2336 dbSNP
rs762228440 2338 dbSNP
rs532995731 2339 dbSNP
rs1301549062 2341 dbSNP
rs945993835 2346 dbSNP
rs1462455768 2347 dbSNP
rs866383823 2352 dbSNP
rs934757558 2370 dbSNP
rs1053200430 2372 dbSNP
rs895812191 2373 dbSNP
rs1464825368 2378 dbSNP
rs1392387511 2381 dbSNP
rs1440173008 2387 dbSNP
rs772123922 2388 dbSNP
rs1025329887 2390 dbSNP
rs905086964 2396 dbSNP
rs1255402259 2403 dbSNP
rs551153983 2409 dbSNP
rs1179977707 2415 dbSNP
rs1002061542 2431 dbSNP
rs937555048 2432 dbSNP
rs1198062029 2434 dbSNP
rs1428434976 2439 dbSNP
rs1016073065 2441 dbSNP
rs775641696 2451 dbSNP
rs972259790 2454 dbSNP
rs1316335442 2456 dbSNP
rs1275235523 2460 dbSNP
rs1246010057 2470 dbSNP
rs760902080 2471 dbSNP
rs570661660 2472 dbSNP
rs768841909 2474 dbSNP
rs895954723 2487 dbSNP
rs1014928082 2489 dbSNP
rs374512774 2490 dbSNP
rs537903655 2501 dbSNP
rs1271123284 2503 dbSNP
rs987132395 2504 dbSNP
rs1333605104 2511 dbSNP
rs910820820 2517 dbSNP
rs1285969112 2520 dbSNP
rs1444890689 2522 dbSNP
rs1162413980 2526 dbSNP
rs943631999 2532 dbSNP
rs1380804576 2535 dbSNP
rs1191976303 2539 dbSNP
rs12159884 2545 dbSNP
rs1456460022 2549 dbSNP
rs746857188 2552 dbSNP
rs1210736849 2556 dbSNP
rs1488273175 2559 dbSNP
rs367840543 2562 dbSNP
rs1475704144 2563 dbSNP
rs1241586887 2575 dbSNP
rs1355088301 2576 dbSNP
rs926141820 2585 dbSNP
rs934811151 2588 dbSNP
rs1373927440 2589 dbSNP
rs373958647 2590 dbSNP
rs1387051033 2593 dbSNP
rs1389537331 2595 dbSNP
rs1291608910 2596 dbSNP
rs568406195 2599 dbSNP
rs1455114746 2604 dbSNP
rs371365192 2619 dbSNP
rs765664755 2620 dbSNP
rs1437906750 2622 dbSNP
rs554473011 2626 dbSNP
rs1399201384 2629 dbSNP
rs1317836133 2633 dbSNP
rs3200355 2638 dbSNP
rs1432864622 2641 dbSNP
rs1044429726 2643 dbSNP
rs1207284716 2643 dbSNP
rs1488789175 2646 dbSNP
rs1355859925 2650 dbSNP
rs1215168001 2655 dbSNP
rs1350663422 2673 dbSNP
rs965874352 2677 dbSNP
rs1233298520 2679 dbSNP
rs1330181027 2683 dbSNP
rs1291429624 2685 dbSNP
rs988061951 2686 dbSNP
rs1401628034 2688 dbSNP
rs1354718063 2690 dbSNP
rs1417841869 2697 dbSNP
rs1404232085 2698 dbSNP
rs572632849 2725 dbSNP
rs1465566931 2735 dbSNP
rs1239183956 2738 dbSNP
rs1280812083 2740 dbSNP
rs967406776 2741 dbSNP
rs1262989937 2742 dbSNP
rs1347856622 2742 dbSNP
rs540079748 2747 dbSNP
rs1486962483 2748 dbSNP
rs1279903253 2749 dbSNP
rs148804164 2755 dbSNP
rs1343595836 2759 dbSNP
rs1253884251 2761 dbSNP
rs1037576061 2764 dbSNP
rs1318142454 2767 dbSNP
rs554270624 2773 dbSNP
rs576207188 2780 dbSNP
rs993307393 2784 dbSNP
rs1334672144 2790 dbSNP
rs750695536 2791 dbSNP
rs1395530027 2799 dbSNP
rs1400243473 2799 dbSNP
rs1172892366 2801 dbSNP
rs372771607 2802 dbSNP
rs1423142487 2805 dbSNP
rs1169023966 2808 dbSNP
rs954456870 2809 dbSNP
rs762672993 2810 dbSNP
rs1187370403 2813 dbSNP
rs1441185115 2832 dbSNP
rs1009050857 2833 dbSNP
rs3747183 2835 dbSNP
rs964372591 2838 dbSNP
rs888760342 2851 dbSNP
rs1256979245 2852 dbSNP
rs1468611098 2854 dbSNP
rs1358122955 2856 dbSNP
rs1284566544 2858 dbSNP
rs1244049733 2877 dbSNP
rs561553491 2887 dbSNP
rs1158282414 2889 dbSNP
rs1376280559 2893 dbSNP
rs766676436 2896 dbSNP
rs751201763 2897 dbSNP
rs926153282 2903 dbSNP
rs956422405 2904 dbSNP
rs1329486816 2907 dbSNP
rs1407438097 2918 dbSNP
rs988966077 2921 dbSNP
rs573610799 2923 dbSNP
rs113802861 2925 dbSNP
rs1009395051 2927 dbSNP
rs967939799 2933 dbSNP
rs77852296 2935 dbSNP
rs1033433830 2940 dbSNP
rs1452963817 2945 dbSNP
rs1290389417 2957 dbSNP
rs142270512 2985 dbSNP
rs533057713 2990 dbSNP
rs1354200436 3000 dbSNP
rs1311303410 3006 dbSNP
rs544810580 3015 dbSNP
rs1237695651 3035 dbSNP
rs927332409 3037 dbSNP
rs1376163174 3039 dbSNP
rs941333792 3042 dbSNP
rs780652709 3044 dbSNP
rs950245421 3047 dbSNP
rs796516018 3049 dbSNP
rs1037586140 3051 dbSNP
rs899058289 3052 dbSNP
rs752666267 3054 dbSNP
rs919401057 3058 dbSNP
rs993753367 3065 dbSNP
rs1363022943 3066 dbSNP
rs1159712216 3076 dbSNP
rs1439620186 3078 dbSNP
rs11546402 3085 dbSNP
rs1379217413 3091 dbSNP
rs1174952014 3097 dbSNP
rs1047588805 3105 dbSNP
rs1220583300 3110 dbSNP
rs1246886017 3110 dbSNP
rs890269169 3115 dbSNP
rs1049283857 3116 dbSNP
rs1008688527 3119 dbSNP
rs1352876659 3119 dbSNP
rs1284029883 3126 dbSNP
rs1483096478 3130 dbSNP
rs1220982097 3138 dbSNP
rs1368605832 3146 dbSNP
rs888783827 3155 dbSNP
rs1342852359 3157 dbSNP
rs1017330037 3158 dbSNP
rs369736624 3174 dbSNP
rs563103811 3177 dbSNP
rs1419676074 3180 dbSNP
rs1196891053 3183 dbSNP
rs1040561188 3191 dbSNP
rs1253286856 3192 dbSNP
rs1415635062 3200 dbSNP
rs1425446758 3209 dbSNP
rs901580848 3211 dbSNP
rs1479248045 3213 dbSNP
rs531710057 3214 dbSNP
rs1194083678 3215 dbSNP
rs756000631 3219 dbSNP
rs1181150658 3227 dbSNP
rs1395965619 3228 dbSNP
rs1455769443 3239 dbSNP
rs1312784380 3240 dbSNP
rs1033273056 3246 dbSNP
rs73416884 3250 dbSNP
rs1320246949 3256 dbSNP
rs989448956 3257 dbSNP
rs1462241185 3261 dbSNP
rs917462790 3262 dbSNP
rs1299884733 3264 dbSNP
rs766033085 3265 dbSNP
rs1014430241 3267 dbSNP
rs748966106 3269 dbSNP
rs1000786851 3270 dbSNP
rs1033598583 3273 dbSNP
rs373099708 3274 dbSNP
rs1390364046 3276 dbSNP
rs1467950242 3277 dbSNP
rs1425284453 3293 dbSNP
rs958993186 3297 dbSNP
rs1477341178 3298 dbSNP
rs1372480344 3308 dbSNP
rs1438279323 3310 dbSNP
rs1183599860 3315 dbSNP
rs941384578 3316 dbSNP
rs974015743 3321 dbSNP
rs1302154761 3322 dbSNP
rs556434344 3324 dbSNP
rs991490544 3328 dbSNP
rs1218422963 3340 dbSNP
rs1024831454 3351 dbSNP
rs1315262666 3364 dbSNP
rs971470433 3365 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000266304.4 | 3UTR | CUAAUUAAGUGCAAUAAAUUUUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
180 hsa-miR-4524a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055251 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT055826 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT060573 CCND1 cyclin D1 2 2
MIRT061013 C1ORF21 chromosome 1 open reading frame 21 2 6
MIRT064694 CCND2 cyclin D2 2 4
MIRT075268 SNTB2 syntrophin beta 2 2 4
MIRT079668 NAPG NSF attachment protein gamma 2 12
MIRT081651 CCNE1 cyclin E1 2 4
MIRT082996 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT083463 RALGAPB Ral GTPase activating protein non-catalytic beta subunit 2 4
MIRT085755 RIF1 replication timing regulatory factor 1 2 2
MIRT086022 UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 2 2
MIRT087431 ZNRF3 zinc and ring finger 3 2 2
MIRT088786 SOCS5 suppressor of cytokine signaling 5 2 2
MIRT089221 ACTR2 ARP2 actin related protein 2 homolog 2 2
MIRT093696 PI4K2B phosphatidylinositol 4-kinase type 2 beta 2 6
MIRT095090 SEC24A SEC24 homolog A, COPII coat complex component 2 4
MIRT096249 CANX calnexin 2 2
MIRT100215 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 2 2
MIRT100746 VEGFA vascular endothelial growth factor A 2 12
MIRT100904 CD2AP CD2 associated protein 2 2
MIRT102647 UBN2 ubinuclein 2 2 10
MIRT103882 FOXK1 forkhead box K1 2 2
MIRT104246 DMTF1 cyclin D binding myb like transcription factor 1 2 2
MIRT106310 ZFHX4 zinc finger homeobox 4 2 6
MIRT107696 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT114943 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT117671 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT133799 SKI SKI proto-oncogene 2 2
MIRT140167 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT142279 DCTN5 dynactin subunit 5 2 8
MIRT143288 N4BP1 NEDD4 binding protein 1 2 2
MIRT165939 CREBRF CREB3 regulatory factor 2 2
MIRT175251 PSAT1 phosphoserine aminotransferase 1 2 6
MIRT186381 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT191470 PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A 2 2
MIRT196480 TAOK1 TAO kinase 1 2 2
MIRT201470 SNRPB2 small nuclear ribonucleoprotein polypeptide B2 2 8
MIRT204615 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 8
MIRT204646 MOB4 MOB family member 4, phocein 2 8
MIRT204749 BZW1 basic leucine zipper and W2 domains 1 2 12
MIRT206031 NUP50 nucleoporin 50 2 6
MIRT211196 FGF2 fibroblast growth factor 2 2 4
MIRT229353 ZNF449 zinc finger protein 449 2 2
MIRT247138 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT249461 ZNF691 zinc finger protein 691 2 4
MIRT256314 CDC42SE2 CDC42 small effector 2 2 2
MIRT258419 WIPI2 WD repeat domain, phosphoinositide interacting 2 2 2
MIRT265083 CHEK1 checkpoint kinase 1 2 2
MIRT270561 SETD1B SET domain containing 1B 2 2
MIRT274749 RAB3IP RAB3A interacting protein 2 2
MIRT277515 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 4
MIRT289642 CBX2 chromobox 2 2 2
MIRT301001 MTMR3 myotubularin related protein 3 2 2
MIRT307149 CTDSPL CTD small phosphatase like 2 4
MIRT309021 USP53 ubiquitin specific peptidase 53 2 2
MIRT314100 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 2 8
MIRT319338 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT320619 ZNRF2 zinc and ring finger 2 2 2
MIRT324285 LURAP1L leucine rich adaptor protein 1 like 2 2
MIRT446498 ASCC1 activating signal cointegrator 1 complex subunit 1 2 2
MIRT448437 TLL1 tolloid like 1 2 2
MIRT461537 ACTR3B ARP3 actin related protein 3 homolog B 2 2
MIRT463162 ZNF367 zinc finger protein 367 2 10
MIRT463493 ZC3H10 zinc finger CCCH-type containing 10 2 2
MIRT465154 TSC22D2 TSC22 domain family member 2 2 2
MIRT466418 TFAP2A transcription factor AP-2 alpha 2 8
MIRT468278 SFT2D2 SFT2 domain containing 2 2 2
MIRT469399 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT471941 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT473688 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT479618 CDC25A cell division cycle 25A 2 2
MIRT482098 AKT3 AKT serine/threonine kinase 3 2 4
MIRT483995 ATAD5 ATPase family, AAA domain containing 5 2 12
MIRT485205 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 8
MIRT498763 C3orf38 chromosome 3 open reading frame 38 2 8
MIRT498961 ORC4 origin recognition complex subunit 4 2 8
MIRT499440 ODF2L outer dense fiber of sperm tails 2 like 2 8
MIRT500080 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 8
MIRT500305 ZNF622 zinc finger protein 622 2 8
MIRT500410 ZMAT3 zinc finger matrin-type 3 2 8
MIRT500789 TLK1 tousled like kinase 1 2 6
MIRT500930 SRPR SRP receptor alpha subunit 2 6
MIRT500943 SREK1 splicing regulatory glutamic acid and lysine rich protein 1 2 8
MIRT501068 SMAD7 SMAD family member 7 2 8
MIRT501711 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT502627 DDX3X DEAD-box helicase 3, X-linked 2 8
MIRT502910 CDCA4 cell division cycle associated 4 2 8
MIRT502935 CDC37L1 cell division cycle 37 like 1 2 8
MIRT504531 ZNF620 zinc finger protein 620 2 6
MIRT505106 YTHDC1 YTH domain containing 1 2 6
MIRT505337 TMEM245 transmembrane protein 245 2 6
MIRT505383 TMEM100 transmembrane protein 100 2 2
MIRT505678 SESTD1 SEC14 and spectrin domain containing 1 2 6
MIRT506157 PLAG1 PLAG1 zinc finger 2 8
MIRT506183 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 6
MIRT506475 MYO5A myosin VA 2 6
MIRT506826 KIF23 kinesin family member 23 2 6
MIRT507160 GAS2L3 growth arrest specific 2 like 3 2 2
MIRT507511 DYNLL2 dynein light chain LC8-type 2 2 4
MIRT507845 CCNE2 cyclin E2 2 6
MIRT510403 ZNF507 zinc finger protein 507 2 2
MIRT518078 TRIM35 tripartite motif containing 35 2 2
MIRT518982 NNT nicotinamide nucleotide transhydrogenase 2 4
MIRT521045 SLC2A3 solute carrier family 2 member 3 2 4
MIRT521190 SBNO1 strawberry notch homolog 1 2 6
MIRT522088 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT524846 ARPP19 cAMP regulated phosphoprotein 19 2 2
MIRT527787 TMEM44 transmembrane protein 44 2 4
MIRT537803 EFNB2 ephrin B2 2 4
MIRT540830 GNAT1 G protein subunit alpha transducin 1 2 4
MIRT541140 PISD phosphatidylserine decarboxylase 2 2
MIRT541419 CBX4 chromobox 4 2 2
MIRT543517 PRSS21 protease, serine 21 2 2
MIRT543824 GSG1 germ cell associated 1 2 2
MIRT544959 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 2
MIRT545179 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 4
MIRT545335 CCDC83 coiled-coil domain containing 83 2 2
MIRT545518 RSL24D1 ribosomal L24 domain containing 1 2 2
MIRT545670 DECR1 2,4-dienoyl-CoA reductase 1 2 2
MIRT545931 ZBTB44 zinc finger and BTB domain containing 44 2 4
MIRT546102 USP48 ubiquitin specific peptidase 48 2 4
MIRT546598 SALL1 spalt like transcription factor 1 2 4
MIRT546626 RTN4 reticulon 4 2 2
MIRT547651 KPNA3 karyopherin subunit alpha 3 2 2
MIRT547987 HCFC2 host cell factor C2 2 4
MIRT548717 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT548931 CDK17 cyclin dependent kinase 17 2 2
MIRT549067 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT549266 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT550460 OSCAR osteoclast associated, immunoglobulin-like receptor 2 4
MIRT550806 FAM229B family with sequence similarity 229 member B 2 2
MIRT552024 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT552334 ZNF704 zinc finger protein 704 2 2
MIRT552732 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT553795 SZRD1 SUZ RNA binding domain containing 1 2 4
MIRT554694 RNF149 ring finger protein 149 2 2
MIRT555133 PTPRD protein tyrosine phosphatase, receptor type D 2 2
MIRT555264 PRDM4 PR/SET domain 4 2 2
MIRT556848 KANK1 KN motif and ankyrin repeat domains 1 2 4
MIRT557474 GPR27 G protein-coupled receptor 27 2 4
MIRT558018 EXT1 exostosin glycosyltransferase 1 2 2
MIRT558498 CYP26B1 cytochrome P450 family 26 subfamily B member 1 2 4
MIRT558579 CREBL2 cAMP responsive element binding protein like 2 2 4
MIRT558610 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT558650 CNKSR3 CNKSR family member 3 2 2
MIRT558986 CA8 carbonic anhydrase 8 2 2
MIRT559141 BTN3A3 butyrophilin subfamily 3 member A3 2 2
MIRT559327 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 2 2
MIRT562021 LANCL1 LanC like 1 2 2
MIRT562869 KIAA1456 KIAA1456 2 2
MIRT563074 SLC25A12 solute carrier family 25 member 12 2 2
MIRT563496 DLGAP3 DLG associated protein 3 2 2
MIRT563890 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 2
MIRT564311 CCNT1 cyclin T1 2 2
MIRT564942 XKR7 XK related 7 2 2
MIRT564979 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT565423 TEF TEF, PAR bZIP transcription factor 2 2
MIRT566824 MAP3K7 mitogen-activated protein kinase kinase kinase 7 2 2
MIRT571961 KIF5B kinesin family member 5B 2 2
MIRT575877 Cask calcium/calmodulin-dependent serine protein kinase (MAGUK family) 2 3
MIRT576523 Txlna taxilin alpha 2 2
MIRT614693 TRAK1 trafficking kinesin protein 1 2 2
MIRT616065 ZC3H14 zinc finger CCCH-type containing 14 2 2
MIRT618838 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT624626 ATXN2 ataxin 2 2 2
MIRT624652 ASAH2 N-acylsphingosine amidohydrolase 2 2 2
MIRT640314 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT659248 CUL3 cullin 3 2 2
MIRT680972 DCAF17 DDB1 and CUL4 associated factor 17 2 2
MIRT682261 RS1 retinoschisin 1 2 2
MIRT682505 GLP2R glucagon like peptide 2 receptor 2 2
MIRT693904 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT699214 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT699373 SLC30A6 solute carrier family 30 member 6 2 2
MIRT699451 SLC16A9 solute carrier family 16 member 9 2 2
MIRT701230 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT702849 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT706163 CASK calcium/calmodulin dependent serine protein kinase 2 3
MIRT718990 UTP15 UTP15, small subunit processome component 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4524a-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-4524a-5p Cetuximab resistant tissue (colorectal carcinoma)

Error report submission