pre-miRNA Information
pre-miRNA hsa-mir-412   
Genomic Coordinates chr14: 101065447 - 101065537
Synonyms MIRN412, hsa-mir-412, MIR412
Description Homo sapiens miR-412 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-412-3p
Sequence 54| ACUUCACCUGGUCCACUAGCCGU |76
Evidence Not_experimental
Experiments
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
rs61992671 18 GWAS
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs369997462 1 dbSNP
rs1439693090 7 dbSNP
rs1301668924 11 dbSNP
rs534204576 13 dbSNP
rs775386036 14 dbSNP
rs762832140 15 dbSNP
rs1203323285 16 dbSNP
rs61992671 18 dbSNP
rs1022012324 19 dbSNP
rs1207609936 20 dbSNP
rs139967426 21 dbSNP
rs539487075 22 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol LY6K   
Synonyms CT97, HSJ001348, URLC10, ly-6K
Description lymphocyte antigen 6 family member K
Transcript NM_001160354   
Other Transcripts NM_001160355 , NM_017527   
Expression
Putative miRNA Targets on LY6K
3'UTR of LY6K
(miRNA target sites are highlighted)
>LY6K|NM_001160354|3'UTR
   1 GCAGGGCCGCCAGGGGTGAGGCTTTGACCCAGACAGAAGGGCCTCGGTGTCAGGCATTGGAATTGCGTGATTGCCTTCTC
  81 TCGGTCTTTATTTCCTATTAGAAATATTTCCACGTTTTTTCATGGTTGCGAAGCAGTGCTCCGCTGGTTGTGCAGCGATG
 161 GAGAGACCCAAGCCAGAGGAGAAGCGGTTTCTCCTGGAAGAGCCCATGCCCTTCTTTTACCTCAAGTGTTGTAAAATTCG
 241 CTACTGCAATTTAGAGGGGCCACCTATCAACTCATCAGTGTTCAAAGAATATGCTGGGAGCATGGGTGAGAGCTGTGGTG
 321 GGCTGTGGCTGGCCATCCTCCTGCTGCTGGCCTCCATTGCAGCCGGCCTCAGCCTGTCTTGAGCCACGGGACTGCCACAG
 401 ACTGAGCCTTCCGGAGCATGGACTCGCTCCAGACCGTTGTCACCTGTTGCATTAAACTTGTTTTCTGTTGATTACCTCTT
 481 GGTTTGACTTCCCAGGGTCTTGGGATGGGAGAGTGGGGATCAGGTGCAGTTGGCTCTTAACCCTCAAGGGTTCTTTAACT
 561 CACATTCAGAGGAAGTCCAGATCTCCTGAGTAGTGATTTTGGTGACAAGTTTTTCTCTTTGAAATCAAACCTTGTAACTC
 641 ATTTATTGCTGATGGCCACTCTTTTCCTTGACTCCCCTCTGCCTCTGAGGGCTTCAGTATTGATGGGGAGGGAGGCCTAA
 721 GTACCACTCATGGAGAGTATGTGCTGAGATGCTTCCGACCTTTCAGGTGACGCAGGAACACTGGGGGAGTCTGAATGATT
 801 GGGGTGAAGACATCCCTGGAGTGAAGGACTCCTCAGCATGGGGGGCAGTGGGGCACACGTTAGGGCTGCCCCCATTCCAG
 881 TGGTGGAGGCGCTGTGGATGGCTGCTTTTCCTCAACCTTTCCTACCAGATTCCAGGAGGCAGAAGATAACTAATTGTGTT
 961 GAAGAAACTTAGACTTCACCCACCAGCTGGCACAGGTGCACAGATTCATAAATTCCCACACGTGTGTGTTCAACATCTGA
1041 AACTTAGGCCAAGTAGAGAGCATCAGGGTAAATGGCGTTCATTTCTCTGTTAAGATGCAGCCATCCATGGGGAGCTGAGA
1121 AATCAGACTCAAAGTTCCACCAAAAACAAATACAAGGGGACTTCAAAAGTTCACGAAAAAAAAAAAAAAAAAAAAAAAAA
1201 AAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugCCGA-UCACCUGGUCCACUUCa 5'
            | || | ||  : :||||||| 
Target 5' gaGTCTGAATGATTGGGGTGAAGa 3'
787 - 810 149.00 -12.60
2
miRNA  3' ugCCGAUCA--CCUGGUCCACUUCa 5'
            ||  |||  |||:|||||| || 
Target 5' tgGGAGAGTGGGGATCAGGTGCAGt 3'
506 - 530 143.00 -25.30
3
miRNA  3' ugcCGAUCACCUGGU--CCACUUCa 5'
             || :|   :|||  |||||:| 
Target 5' ---GCAGGGCCGCCAGGGGTGAGGc 3'
1 - 22 134.00 -17.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31508887 14 COSMIC
COSN30162028 19 COSMIC
COSN30105910 38 COSMIC
COSN30678111 43 COSMIC
COSN31613656 47 COSMIC
COSN30132312 49 COSMIC
COSN31533854 53 COSMIC
COSN28866613 54 COSMIC
COSN20076489 59 COSMIC
COSN31561282 67 COSMIC
COSN30113565 79 COSMIC
COSN5853076 84 COSMIC
COSM7228220 94 COSMIC
COSM7846232 95 COSMIC
COSM3645929 102 COSMIC
COSM4838795 109 COSMIC
COSM1733301 114 COSMIC
COSM4890722 115 COSMIC
COSM8818985 118 COSMIC
COSM4768200 122 COSMIC
COSM9558954 122 COSMIC
COSM7779826 125 COSMIC
COSM3432177 130 COSMIC
COSM290492 131 COSMIC
COSM3645930 140 COSMIC
COSM5787992 142 COSMIC
COSM4879112 143 COSMIC
COSM5550685 144 COSMIC
COSM6472422 145 COSMIC
COSM749835 149 COSMIC
COSM9145120 151 COSMIC
COSM8100760 158 COSMIC
COSM205541 187 COSMIC
COSM7599140 190 COSMIC
COSM4600576 194 COSMIC
COSM1096855 204 COSMIC
COSM9450926 212 COSMIC
COSM1214106 215 COSMIC
COSM4403788 224 COSMIC
COSM1700729 225 COSMIC
COSM9625812 225 COSMIC
COSM4618740 230 COSMIC
COSM3645931 240 COSMIC
COSM7502503 241 COSMIC
COSM3897321 244 COSMIC
COSM5673839 248 COSMIC
COSM7760849 254 COSMIC
COSM3645932 257 COSMIC
COSM4762244 259 COSMIC
COSM6995824 264 COSMIC
COSM1489065 274 COSMIC
COSM1096856 286 COSMIC
COSM1214108 287 COSMIC
COSM162298 288 COSMIC
COSM5622498 298 COSMIC
COSM4977466 299 COSMIC
COSM5874016 305 COSMIC
COSM7921024 305 COSMIC
COSM7921085 306 COSMIC
COSM8866045 326 COSMIC
COSM6241574 329 COSMIC
COSM2157816 333 COSMIC
COSM5746916 334 COSMIC
COSM4006858 336 COSMIC
COSM2867654 340 COSMIC
COSM6889358 342 COSMIC
COSM3897322 353 COSMIC
COSM4788916 361 COSMIC
COSM2867655 366 COSMIC
COSM7191238 371 COSMIC
COSN26754672 388 COSMIC
COSN30475653 389 COSMIC
COSN26983285 395 COSMIC
COSN30523019 413 COSMIC
COSN31544378 417 COSMIC
COSN30448185 426 COSMIC
COSN30106908 430 COSMIC
COSN30472772 435 COSMIC
COSN20076265 436 COSMIC
COSN30450804 436 COSMIC
COSN30139734 437 COSMIC
COSN31493579 451 COSMIC
COSN14329323 461 COSMIC
COSN30476248 466 COSMIC
COSN32052908 469 COSMIC
COSN18733239 479 COSMIC
COSN31603740 505 COSMIC
COSN30469632 509 COSMIC
COSN30451095 516 COSMIC
COSN21647922 671 COSMIC
COSN19529389 761 COSMIC
COSN26364081 772 COSMIC
COSN22812883 1182 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1297942408 2 dbSNP
rs782006835 9 dbSNP
rs373061674 10 dbSNP
rs782363116 14 dbSNP
rs781922200 20 dbSNP
rs782068781 22 dbSNP
rs147502877 30 dbSNP
rs781978449 35 dbSNP
rs782127393 40 dbSNP
rs1392834137 42 dbSNP
rs1325840717 43 dbSNP
rs140449443 46 dbSNP
rs781834232 47 dbSNP
rs1004014929 51 dbSNP
rs1036870454 65 dbSNP
rs782424851 66 dbSNP
rs371930733 68 dbSNP
rs1418439588 72 dbSNP
rs1191205803 78 dbSNP
rs587712925 83 dbSNP
rs782561342 84 dbSNP
rs782640243 86 dbSNP
rs1251013247 87 dbSNP
rs1192961907 92 dbSNP
rs2244163 94 dbSNP
rs144295921 98 dbSNP
rs1202250571 102 dbSNP
rs782177615 108 dbSNP
rs868963723 111 dbSNP
rs970063528 112 dbSNP
rs201222374 114 dbSNP
rs145490845 115 dbSNP
rs782426095 115 dbSNP
rs1302821325 116 dbSNP
rs587639853 117 dbSNP
rs1448143539 120 dbSNP
rs76268228 121 dbSNP
rs1376238750 130 dbSNP
rs782387825 131 dbSNP
rs376231147 135 dbSNP
rs781951363 136 dbSNP
rs782089572 139 dbSNP
rs782301377 141 dbSNP
rs781928418 143 dbSNP
rs144108496 144 dbSNP
rs782187416 150 dbSNP
rs369405589 155 dbSNP
rs1392684235 156 dbSNP
rs146506658 157 dbSNP
rs373117519 158 dbSNP
rs782734192 164 dbSNP
rs141122872 166 dbSNP
rs1175196201 171 dbSNP
rs144176918 173 dbSNP
rs1238218165 176 dbSNP
rs782595352 177 dbSNP
rs932277175 180 dbSNP
rs781887609 182 dbSNP
rs151035945 186 dbSNP
rs782212141 187 dbSNP
rs148824346 193 dbSNP
rs1319186320 194 dbSNP
rs782556179 195 dbSNP
rs377577209 204 dbSNP
rs782394935 205 dbSNP
rs1391136001 210 dbSNP
rs142496379 213 dbSNP
rs782124602 216 dbSNP
rs782398047 221 dbSNP
rs1315228060 228 dbSNP
rs138834773 229 dbSNP
rs782709179 231 dbSNP
rs781806659 232 dbSNP
rs1172467075 240 dbSNP
rs371040434 241 dbSNP
rs587614209 243 dbSNP
rs141724373 244 dbSNP
rs112045155 247 dbSNP
rs1418247167 260 dbSNP
rs782745204 263 dbSNP
rs781999768 264 dbSNP
rs138516348 265 dbSNP
rs782667211 269 dbSNP
rs1257086449 272 dbSNP
rs782283831 277 dbSNP
rs797025028 282 dbSNP
rs374472560 287 dbSNP
rs1000116237 288 dbSNP
rs1032976375 289 dbSNP
rs587753598 293 dbSNP
rs587644884 294 dbSNP
rs1238928196 298 dbSNP
rs782367364 303 dbSNP
rs1322899724 304 dbSNP
rs587700793 307 dbSNP
rs144100705 313 dbSNP
rs782402949 334 dbSNP
rs782035174 339 dbSNP
rs868975346 341 dbSNP
rs1353105708 345 dbSNP
rs587754695 347 dbSNP
rs377347371 350 dbSNP
rs781963260 353 dbSNP
rs782046607 357 dbSNP
rs782712447 358 dbSNP
rs781882869 360 dbSNP
rs782555332 361 dbSNP
rs782760195 363 dbSNP
rs370718147 365 dbSNP
rs144411665 366 dbSNP
rs782631167 369 dbSNP
rs1418573445 376 dbSNP
rs151014407 388 dbSNP
rs375045471 389 dbSNP
rs782670101 390 dbSNP
rs782299836 393 dbSNP
rs1474112191 395 dbSNP
rs782391623 397 dbSNP
rs781948432 409 dbSNP
rs782008552 411 dbSNP
rs782127677 411 dbSNP
rs368295788 413 dbSNP
rs782304963 414 dbSNP
rs781930711 419 dbSNP
rs1469299195 422 dbSNP
rs587664088 426 dbSNP
rs141099446 427 dbSNP
rs781958029 429 dbSNP
rs1212146069 430 dbSNP
rs186867787 431 dbSNP
rs782133838 432 dbSNP
rs144808414 436 dbSNP
rs905917431 437 dbSNP
rs1327889718 453 dbSNP
rs1292816809 456 dbSNP
rs2244152 479 dbSNP
rs1395050308 488 dbSNP
rs1327866817 499 dbSNP
rs1459637671 500 dbSNP
rs1054502985 503 dbSNP
rs1168328255 509 dbSNP
rs1463713687 515 dbSNP
rs1371626623 519 dbSNP
rs138669857 532 dbSNP
rs1454776103 536 dbSNP
rs1255392098 537 dbSNP
rs1192343961 541 dbSNP
rs782012376 546 dbSNP
rs1274124827 563 dbSNP
rs2294011 565 dbSNP
rs587739102 566 dbSNP
rs1340957547 569 dbSNP
rs902101426 573 dbSNP
rs1249273855 578 dbSNP
rs782588092 594 dbSNP
rs190173214 595 dbSNP
rs1029575372 601 dbSNP
rs782695640 610 dbSNP
rs1370235885 612 dbSNP
rs1329297959 615 dbSNP
rs1411456892 622 dbSNP
rs952226786 631 dbSNP
rs1167581221 634 dbSNP
rs1435377981 649 dbSNP
rs781944447 654 dbSNP
rs1171904893 660 dbSNP
rs1454217670 661 dbSNP
rs587695782 686 dbSNP
rs373803529 690 dbSNP
rs781932334 701 dbSNP
rs782079358 726 dbSNP
rs1436450990 730 dbSNP
rs917136731 732 dbSNP
rs1203957091 736 dbSNP
rs1348208719 738 dbSNP
rs1281820145 746 dbSNP
rs2953489 752 dbSNP
rs1231533412 757 dbSNP
rs587747140 758 dbSNP
rs971721364 772 dbSNP
rs980082459 773 dbSNP
rs1333799234 776 dbSNP
rs927121322 782 dbSNP
rs1327982182 783 dbSNP
rs1415605489 783 dbSNP
rs1377564419 784 dbSNP
rs1311071713 785 dbSNP
rs1434197050 800 dbSNP
rs1409291559 807 dbSNP
rs1160830938 819 dbSNP
rs782753321 829 dbSNP
rs782321006 833 dbSNP
rs1189162340 835 dbSNP
rs1485794336 840 dbSNP
rs1259191317 845 dbSNP
rs1208031235 846 dbSNP
rs587622033 847 dbSNP
rs1225365606 850 dbSNP
rs587697349 859 dbSNP
rs587759287 860 dbSNP
rs587647162 869 dbSNP
rs1357545276 871 dbSNP
rs1311314069 873 dbSNP
rs182467691 875 dbSNP
rs1345828577 884 dbSNP
rs1320420547 885 dbSNP
rs1399447792 887 dbSNP
rs1384953144 891 dbSNP
rs587775377 892 dbSNP
rs1419512405 903 dbSNP
rs1185391197 915 dbSNP
rs1472285734 916 dbSNP
rs782794192 919 dbSNP
rs1217386188 928 dbSNP
rs1445206148 931 dbSNP
rs782520037 935 dbSNP
rs2585153 939 dbSNP
rs1336715630 947 dbSNP
rs1291251037 969 dbSNP
rs887928705 970 dbSNP
rs1006414542 974 dbSNP
rs1428733299 982 dbSNP
rs1016663448 993 dbSNP
rs961121595 994 dbSNP
rs1365034199 1016 dbSNP
rs1327194421 1021 dbSNP
rs1463308208 1022 dbSNP
rs1392701846 1025 dbSNP
rs1164721880 1027 dbSNP
rs1404381663 1034 dbSNP
rs1419872961 1039 dbSNP
rs587739717 1047 dbSNP
rs78926635 1061 dbSNP
rs1194149342 1077 dbSNP
rs1024388327 1078 dbSNP
rs1220636765 1082 dbSNP
rs971120766 1083 dbSNP
rs781903921 1088 dbSNP
rs1212834528 1093 dbSNP
rs927235895 1096 dbSNP
rs957173470 1105 dbSNP
rs1443725089 1120 dbSNP
rs1369505936 1126 dbSNP
rs140633723 1131 dbSNP
rs1443392108 1141 dbSNP
rs386731075 1141 dbSNP
rs28719133 1142 dbSNP
rs2572899 1143 dbSNP
rs1427464684 1158 dbSNP
rs1388987702 1161 dbSNP
rs1040498825 1170 dbSNP
rs1251065272 1175 dbSNP
rs923254832 1176 dbSNP
rs587653448 1181 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545213. RNA binding protein: AGO2. Condition:Control PAR-CLIP data was present in GSM545215. RNA binding protein: AGO4. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugccgaUCACCUGGUCCACUUCa 5'
                | ||  : :||||||| 
Target 5' -----gAAUGAUUGGGGUGAAGa 3'
1 - 18
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545213
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / Control
Location of target site ENST00000522591.1 | 3UTR | AAUGAUUGGGGUGAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM545215
Method / RBP PAR-CLIP / AGO4
Cell line / Condition HEK293 / Control
Location of target site ENST00000522591.1 | 3UTR | GAAUGAUUGGGGUGAAGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
Click to see details
138 hsa-miR-412-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT005780 ACVR1C activin A receptor type 1C 1 1
MIRT062013 YOD1 YOD1 deubiquitinase 2 2
MIRT345112 ATXN7L3 ataxin 7 like 3 2 2
MIRT383735 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT396956 CELF1 CUGBP Elav-like family member 1 2 2
MIRT439280 XIAP X-linked inhibitor of apoptosis 1 1
MIRT439313 VAT1 vesicle amine transport 1 1 1
MIRT439375 TUBA1A tubulin alpha 1a 1 1
MIRT439418 TMOD1 tropomodulin 1 1 1
MIRT439503 SURF4 surfeit 4 1 1
MIRT439563 SON SON DNA binding protein 1 1
MIRT439598 SLC3A2 solute carrier family 3 member 2 1 1
MIRT439670 SETD1B SET domain containing 1B 1 1
MIRT439767 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT439922 PPL periplakin 1 1
MIRT439947 PLEKHA6 pleckstrin homology domain containing A6 1 1
MIRT439952 PLCB4 phospholipase C beta 4 1 1
MIRT439961 PKD1 polycystin 1, transient receptor potential channel interacting 1 1
MIRT440005 PEG3 paternally expressed 3 1 1
MIRT440061 OSBPL8 oxysterol binding protein like 8 1 1
MIRT440166 MYH14 myosin heavy chain 14 1 1
MIRT440276 MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1 1 1
MIRT440437 IPO13 importin 13 1 1
MIRT440441 INTS3 integrator complex subunit 3 1 1
MIRT440448 INS insulin 1 1
MIRT440461 IGF2R insulin like growth factor 2 receptor 1 1
MIRT440472 IARS isoleucyl-tRNA synthetase 1 1
MIRT440530 GUCY1A3 guanylate cyclase 1 soluble subunit alpha 1 1
MIRT440542 GOLGA2 golgin A2 1 1
MIRT440569 GIGYF1 GRB10 interacting GYF protein 1 1 1
MIRT440608 FTSJD2 cap methyltransferase 1 1 1
MIRT440750 EEF1A2 eukaryotic translation elongation factor 1 alpha 2 1 1
MIRT440781 DOT1L DOT1 like histone lysine methyltransferase 1 1
MIRT440804 DNAJA4 DnaJ heat shock protein family (Hsp40) member A4 1 1
MIRT440867 CSDE1 cold shock domain containing E1 1 1
MIRT440890 CPEB4 cytoplasmic polyadenylation element binding protein 4 1 1
MIRT440917 COL1A1 collagen type I alpha 1 chain 1 1
MIRT440967 CDH22 cadherin 22 1 1
MIRT440968 CDH2 cadherin 2 1 1
MIRT441024 CALR calreticulin 1 1
MIRT441278 ACTB actin beta 1 1
MIRT448421 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT462833 BCL3 B-cell CLL/lymphoma 3 2 2
MIRT465062 TSR1 TSR1, ribosome maturation factor 2 2
MIRT476050 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT485318 MZT1 mitotic spindle organizing protein 1 2 4
MIRT493584 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 6
MIRT494567 BAK1 BCL2 antagonist/killer 1 2 2
MIRT497393 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT503250 ZNF257 zinc finger protein 257 2 10
MIRT503656 ZNF138 zinc finger protein 138 2 10
MIRT505882 RNF219 ring finger protein 219 2 2
MIRT507525 DSTN destrin, actin depolymerizing factor 2 4
MIRT510663 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 4
MIRT514682 ZNF701 zinc finger protein 701 2 4
MIRT515370 ZNF208 zinc finger protein 208 2 6
MIRT525237 KCNJ12 potassium voltage-gated channel subfamily J member 12 2 2
MIRT527963 MTAP methylthioadenosine phosphorylase 2 2
MIRT528482 STAMBPL1 STAM binding protein like 1 2 2
MIRT529909 C1orf64 steroid receptor associated and regulated protein 2 4
MIRT531558 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT532234 KLF2 Kruppel like factor 2 2 4
MIRT532480 HOXA13 homeobox A13 2 2
MIRT535544 P2RY2 purinergic receptor P2Y2 2 2
MIRT547311 NR1D2 nuclear receptor subfamily 1 group D member 2 2 2
MIRT551795 ZNF117 zinc finger protein 117 2 4
MIRT554939 RAP1A RAP1A, member of RAS oncogene family 2 2
MIRT558171 EIF5A2 eukaryotic translation initiation factor 5A2 2 2
MIRT568771 LY6K lymphocyte antigen 6 family member K 2 2
MIRT570766 ZNF99 zinc finger protein 99 2 2
MIRT572405 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT573396 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT610403 RXRB retinoid X receptor beta 2 2
MIRT610886 SCN8A sodium voltage-gated channel alpha subunit 8 2 2
MIRT611197 TMEM105 transmembrane protein 105 2 2
MIRT611244 ZNF550 zinc finger protein 550 2 2
MIRT615669 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 4
MIRT617974 DOCK4 dedicator of cytokinesis 4 2 2
MIRT619150 ZNF326 zinc finger protein 326 2 2
MIRT619608 MKKS McKusick-Kaufman syndrome 2 2
MIRT621053 DGKD diacylglycerol kinase delta 2 2
MIRT623665 HRK harakiri, BCL2 interacting protein 2 2
MIRT624883 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2 2
MIRT624939 MARCH2 membrane associated ring-CH-type finger 2 2 2
MIRT634198 TMOD2 tropomodulin 2 2 4
MIRT636727 AGO2 argonaute 2, RISC catalytic component 2 2
MIRT637741 POLR3K RNA polymerase III subunit K 2 2
MIRT638002 ZC3H13 zinc finger CCCH-type containing 13 2 2
MIRT640395 ZNF785 zinc finger protein 785 2 2
MIRT640505 ANTXR1 anthrax toxin receptor 1 2 2
MIRT641293 SLAMF1 signaling lymphocytic activation molecule family member 1 2 2
MIRT641863 STOML1 stomatin like 1 2 2
MIRT642600 C14orf180 chromosome 14 open reading frame 180 2 2
MIRT642895 CASP1 caspase 1 2 2
MIRT643967 FHL2 four and a half LIM domains 2 2 4
MIRT645237 KCTD12 potassium channel tetramerization domain containing 12 2 2
MIRT646621 CENPL centromere protein L 2 2
MIRT648620 CYB561A3 cytochrome b561 family member A3 2 2
MIRT648908 ZNF551 zinc finger protein 551 2 2
MIRT649439 HIBADH 3-hydroxyisobutyrate dehydrogenase 2 2
MIRT650637 LTF lactotransferrin 2 2
MIRT650971 STARD3NL STARD3 N-terminal like 2 2
MIRT651067 ZNF518B zinc finger protein 518B 2 4
MIRT652384 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT653958 SEPN1 selenoprotein N 2 2
MIRT656885 KIF1C kinesin family member 1C 2 2
MIRT657965 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT658080 FOXR2 forkhead box R2 2 2
MIRT662570 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT663089 METTL10 EEF1A lysine methyltransferase 2 2 2
MIRT683705 ZNF195 zinc finger protein 195 2 2
MIRT683835 ZNF682 zinc finger protein 682 2 2
MIRT706811 APOL4 apolipoprotein L4 2 2
MIRT707575 DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 2 2
MIRT708606 ZNF260 zinc finger protein 260 2 2
MIRT708859 TMSB4X thymosin beta 4, X-linked 2 2
MIRT709861 PDIK1L PDLIM1 interacting kinase 1 like 2 2
MIRT709987 RBM41 RNA binding motif protein 41 2 2
MIRT710098 KPNA5 karyopherin subunit alpha 5 2 2
MIRT710211 ENAH ENAH, actin regulator 2 2
MIRT710868 B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 2 2
MIRT710986 SUSD5 sushi domain containing 5 2 2
MIRT711460 RNF145 ring finger protein 145 2 2
MIRT712302 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT713609 SYTL4 synaptotagmin like 4 2 2
MIRT713789 MAK16 MAK16 homolog 2 2
MIRT715480 MYO9B myosin IXB 2 2
MIRT716328 POU5F1 POU class 5 homeobox 1 2 2
MIRT717252 TMEM246 transmembrane protein 246 2 2
MIRT718077 CLIC5 chloride intracellular channel 5 2 2
MIRT718463 EED embryonic ectoderm development 2 2
MIRT718645 NKPD1 NTPase KAP family P-loop domain containing 1 2 2
MIRT718982 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 2
MIRT721078 RPS9 ribosomal protein S9 2 2
MIRT721419 SEC24A SEC24 homolog A, COPII coat complex component 2 2
MIRT721863 CENPJ centromere protein J 2 2
MIRT722492 PNKD paroxysmal nonkinesigenic dyskinesia 2 2
MIRT723391 CALN1 calneuron 1 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-412 Gemcitabine approved 60750 Northern blot Mz-ChA-1 human cholangiocarcinoma cell lines 16762633 2006 down-regulated
miR-412 Progesterone approved 5994 Microarray Breast cancer 22330642 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-412 Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-412 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-412-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (RKO)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (HCT-116)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved sensitive High Anaplastic Thyroid Cancer tissue
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM47)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM43)
hsa-miR-412-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-412-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-412-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (Panc1-GR1)
hsa-miR-412-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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