pre-miRNA Information
pre-miRNA hsa-mir-758   
Genomic Coordinates chr14: 101026020 - 101026107
Synonyms MIRN758, hsa-mir-758, MIR758
Description Homo sapiens miR-758 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-758-5p
Sequence 15| GAUGGUUGACCAGAGAGCACAC |36
Evidence Experimental
Experiments SOLiD
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 16 14 + 101026049 29233923 MiREDiBase
A-to-I 21 14 + 101026054 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs372417522 1 dbSNP
rs748092616 2 dbSNP
rs1270901332 4 dbSNP
rs1364206491 5 dbSNP
rs1483583954 8 dbSNP
rs770931807 10 dbSNP
rs776760808 11 dbSNP
rs1360350664 12 dbSNP
rs759742151 13 dbSNP
rs1002938972 15 dbSNP
rs770107042 17 dbSNP
rs369242818 20 dbSNP
rs1217090272 21 dbSNP
rs763341052 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF655   
Synonyms VIK, VIK-1
Description zinc finger protein 655
Transcript NM_001009960   
Other Transcripts NM_001009958 , NM_001083956 , NM_001085366 , NM_001085367 , NM_001085368 , NM_024061 , NM_138494   
Expression
Putative miRNA Targets on ZNF655
3'UTR of ZNF655
(miRNA target sites are highlighted)
>ZNF655|NM_001009960|3'UTR
   1 ATGTAATGAAGATGGGAAGATATTTATCAAATTCAGGCTTCATTCAGCATCTGAGAGTTCACACCAGGGAGAAATCATGT
  81 ATGTACTGCATGTGGTAAAGCCTTCAGTCATAGCTCAGCCATTGCTCAGCATCAGATAATTCACACCAGAGAGAAACCCT
 161 CTGAATGTGACGAATGAAGAAAAGGTATTAGTGTTAAACTCTTAATCGACTCCTGCAAATCTATACCAGTGAGAAATCTT
 241 ACAAATGTATTGAATGTGGCAAATTTTTCATGCTATTAGTATTTTCATACCTTAGTCACATTTGGAGAATTCACATGGGA
 321 ATAAAATTCCATTGCTGCAATGAATGTGAAAAAGCCATCAGTCAAAGAAACTACCTTGTTTAGTATCAAATTCACGCCAT
 401 GCAAAAAGATTATAAATGTAATAAGCATGTATGTGTGTGAGGAGATTCAGTCATAACCCAACGCTCATTCAACATCAAAG
 481 AATTTATACCTAAGAGAACTTATTTGGGTGTAGTAAATGGCAGATCTTTCAATAGGAGTTTAACTAGTCTTTGTCATATC
 561 AGAATATCCATAGTAGACAAGAATTTGATGTAACGCAAATGGAAAAACTCGACACCACATTTCAGGCTTTACCCAACATC
 641 GAAATAATGGAGAGAAAATTGTTGATTATTTGTTTATGAAATTGTTAATACATAGTCCCAATCTTTTTCATTGCACAAAA
 721 ATCTAGGGTTGACTTGGTAAATGCAGTGACATTTTCTCATGGAGTTCCTTTATTTAATATGTATTCTAAGTAGGTACGTT
 801 TATTTTTACTTTTTTATTATAATTTTGATATTAAAAAGAACAGAGATGGGGTCTTGCTTTGTTGCCCAGGCTGGTCTTGA
 881 ACTCCTGGCCTCAAGCGATCCTCCCACCTGTCCTCCCAAAGTGCTGGGGTTACAGGCGTGTGTCACTGTGCTGGGCCTAT
 961 TTTATTTATAGAACTCATTTAAGCTGTTTTTATTTTAATATGCCCTATAAACATTTTTATATTTTTTGAAATTGGTTCTT
1041 AGTGTTCACAACTTCCATAAGATACTGCTAATGCACCAGTATTAAAACACATCGACGTAAGTAGCTCATTTAGCTTTTTC
1121 TGCTGTTCTTGGCCCAAGTTCTTTCCAAAACCAACTCTTAGGCCTGCTCTTTACTAGGGATCTTATGTCGTATTGCTTTA
1201 CAGCCACAACACTTGGATTCCTGTTGATTAACTTCTCCATTCTCTTAAGCACCTTTAGAAGATTTAGAAGTTTCCTAGTT
1281 TTAAGTGTTTCACCAGCAAGTATTCCATACCTACTTGATGTTGCTGGTCTGGTGTCTTATTTCCTAAAGTGAAGCATCTT
1361 TTTTTAAAAAAGAATTTGATTGACAATATATCCAGTCCAATATAAGTATGAAGGATTCTCTCTCCTGAGATTGTAGCAGG
1441 CAGCCAAACATTTTCAAATGATGCCCAAGGTTTTAGCTGTCTTGTGTGCATCCACAGTCTGCGAAGAAGACATGATAAGG
1521 ACATCAGGGAGCCAACAAGACTCCTAATAGCCTCACTACATTCATCCAGTGCCTATTCTGCATGCCTAAGCTTAGAGTTC
1601 TTTTATATACCTCTACGGCCAGCAAAATGCTCAGGTCTGCTCTTGGTAGGGTAAACATAAAGAAGATACACAGGCCGGGC
1681 ATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGATGGATCACGAGGTCAGGCAGTCGAGACCATCC
1761 TGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAGTTAGCCGGGTGTGGTGGCACGCGCCTGTAATCCCAGC
1841 TACTCAGGAGGCTGAGGCAGGAGAACTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATTGCACCACTGCACT
1921 CCAGCCTGGGCGACAGAGCAGGACTCTCTCTCAAAAAAACACAAAAAAACAAAAACAAAAAACCATACACACACACACAC
2001 ACACACAAATCAGCATCATAAGGGAATGTAGCCTTCCAACAGAGATGATGCTGTTCGTATGTTAATCTCAGAGACAGTAT
2081 TTCAAGAGAGTGGCAGGTCTGTTCCTGGTAAAATTTTAACCATTAGGATTGCAGATAAATGTTTGAATTCTGCTCCTCTC
2161 TCATCAATCCAGGACAGTATTTGAAGTGTGAGGGCTTTGTGTATAGTTGTTTATCCATTACCACATTTTTGTATTTTAAT
2241 AGTCTACAGGCTATATAAAAGAACATGGCTTTTTGACTGATAAAAGTGATTACAGATGTTGGCTCAAGTTCAGGGCCACC
2321 ATCATATACCTAACAAGAGTTCATGATTCTTTAGGTAATGTCAAAACATTTTGTATTTTTCCATCTTAAGCTTTATAACA
2401 TTTTGTGAGTAAGACAAATGTTATTTAAAATTCTTGTTGTCAGTCCAGCAATTGAGGCTTTCATAGTTCAGTGTTATAAT
2481 ATTCAGTAGGGACCCTCAACAAATATATAAAAATATGTTGCTCACTCTATAATCCTCCTATGGCTAACCTCTAGGATAGT
2561 TCTGCCACTATATTTTACTTCTTTGCCATCAGCAAGAGTAGGATTTCATCAAGGCAAGGTAGGAATCTAAATGAAATTGA
2641 TATATAAATGAATTGATCTAAATGTAAAAGCAAATGAAAAATGCATGTGTTTTTTCCTGTCAAACATGTATACCCTTATG
2721 TATAGAGACCAGTAGTCACGTATGGTGACTGAAACAGGATTATGTAATCCCTAAAAAGCAGAATATGTAAAAATCACATG
2801 TATGCGTTTGGTTTAGGAATGTGCTTTTGTACTTCCACTTGAATAAAGGTGTGTTTGGTATTCTGAGAAAAAAAAAAAAA
2881 AAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cacACGAGAGACC-------AGUUGGUAg 5'
             ||:|| ||||       |:|||||| 
Target 5' gtcTGTTC-CTGGTAAAATTTTAACCATt 3'
2097 - 2124 142.00 -17.51
2
miRNA  3' caCACGAGAGA--CCAGUUGGUAg 5'
            |||:|:|:|   ||||| ||| 
Target 5' atGTGTTTTTTCCTGTCAAACATg 3'
2685 - 2708 138.00 -14.10
3
miRNA  3' cacacgAGAGACCAGUUGGUAg 5'
                || : | |||:|||| 
Target 5' cttcagTCATAGCTCAGCCATt 3'
102 - 123 136.00 -9.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31500705 35 COSMIC
COSN19708078 72 COSMIC
COSN31552866 77 COSMIC
COSN30109389 103 COSMIC
COSN20051219 121 COSMIC
COSN23987377 125 COSMIC
COSN30525051 154 COSMIC
COSN14312625 172 COSMIC
COSN31599592 173 COSMIC
COSN31600468 208 COSMIC
COSN30544875 298 COSMIC
COSN31567627 325 COSMIC
COSN31570223 396 COSMIC
COSN31653865 410 COSMIC
COSN20353378 432 COSMIC
COSN22842440 676 COSMIC
COSN32056957 938 COSMIC
COSN5105784 1095 COSMIC
COSN26099155 1355 COSMIC
COSN30161893 1422 COSMIC
COSN2246604 1439 COSMIC
COSN16132430 1591 COSMIC
COSN27979069 1670 COSMIC
COSN8517976 1674 COSMIC
COSN22165156 1747 COSMIC
COSN22544677 1907 COSMIC
COSN14973612 1932 COSMIC
COSN22004974 1953 COSMIC
COSN20104497 2006 COSMIC
COSN20104496 2008 COSMIC
COSN17527245 2011 COSMIC
COSN17983068 2099 COSMIC
COSN1356262 2162 COSMIC
COSN20664413 2598 COSMIC
COSN26554611 2611 COSMIC
COSN16127633 2656 COSMIC
COSN32065656 2743 COSMIC
COSN2246606 2842 COSMIC
COSN31520469 2868 COSMIC
rs952319 243 GWAS
rs111390579 1988 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs761172263 4 dbSNP
rs368457595 6 dbSNP
rs141098294 13 dbSNP
rs375178324 16 dbSNP
rs1427518309 19 dbSNP
rs763617776 19 dbSNP
rs764670239 22 dbSNP
rs1263856062 23 dbSNP
rs750314889 24 dbSNP
rs1468366773 27 dbSNP
rs758360881 32 dbSNP
rs1014848669 38 dbSNP
rs780004213 39 dbSNP
rs1238442645 41 dbSNP
rs746780593 46 dbSNP
rs754783708 47 dbSNP
rs778052484 50 dbSNP
rs1222450344 52 dbSNP
rs748412091 52 dbSNP
rs73713519 55 dbSNP
rs771882406 60 dbSNP
rs571551210 69 dbSNP
rs1297040652 77 dbSNP
rs538233687 78 dbSNP
rs553751630 79 dbSNP
rs953217492 88 dbSNP
rs1303339682 94 dbSNP
rs1426964536 100 dbSNP
rs985883799 110 dbSNP
rs1175978876 111 dbSNP
rs1433603480 114 dbSNP
rs1019131087 127 dbSNP
rs1174890610 128 dbSNP
rs192509626 129 dbSNP
rs1427960783 147 dbSNP
rs1415232561 153 dbSNP
rs1421139118 156 dbSNP
rs1185961888 163 dbSNP
rs1460264109 168 dbSNP
rs535950786 171 dbSNP
rs369149319 172 dbSNP
rs1480734350 173 dbSNP
rs1429186458 175 dbSNP
rs1252673472 179 dbSNP
rs554697040 202 dbSNP
rs914120808 205 dbSNP
rs571498132 208 dbSNP
rs1247990806 209 dbSNP
rs1335780142 212 dbSNP
rs1447835682 215 dbSNP
rs979378467 223 dbSNP
rs767047498 224 dbSNP
rs1398957186 226 dbSNP
rs926657988 227 dbSNP
rs1461605098 232 dbSNP
rs1350477295 234 dbSNP
rs760423094 241 dbSNP
rs952319 243 dbSNP
rs1385043507 244 dbSNP
rs1179705526 254 dbSNP
rs1241170492 272 dbSNP
rs918036774 276 dbSNP
rs949858070 279 dbSNP
rs1193710512 288 dbSNP
rs759689388 294 dbSNP
rs1480026976 306 dbSNP
rs1213523616 307 dbSNP
rs1248438706 315 dbSNP
rs7805661 316 dbSNP
rs1357138315 328 dbSNP
rs150954448 332 dbSNP
rs1337294847 333 dbSNP
rs1305140635 341 dbSNP
rs541041921 344 dbSNP
rs1304995659 358 dbSNP
rs1422791974 358 dbSNP
rs1365563572 368 dbSNP
rs1159771080 381 dbSNP
rs183237672 394 dbSNP
rs1390376735 396 dbSNP
rs1362353283 397 dbSNP
rs530167890 399 dbSNP
rs542337852 405 dbSNP
rs1179235334 406 dbSNP
rs1431197778 409 dbSNP
rs1269013332 412 dbSNP
rs1201006926 419 dbSNP
rs1441101151 422 dbSNP
rs1049477532 425 dbSNP
rs1205579609 428 dbSNP
rs1352591147 432 dbSNP
rs1379118674 434 dbSNP
rs1238644362 441 dbSNP
rs1398498314 442 dbSNP
rs1285411244 447 dbSNP
rs888766952 448 dbSNP
rs563811579 460 dbSNP
rs1299345440 463 dbSNP
rs1018689222 464 dbSNP
rs1383283013 473 dbSNP
rs756964418 475 dbSNP
rs1466845573 481 dbSNP
rs372184182 482 dbSNP
rs1447747306 488 dbSNP
rs965775028 491 dbSNP
rs1348605389 493 dbSNP
rs1230159747 497 dbSNP
rs1009650572 514 dbSNP
rs1267486158 518 dbSNP
rs140853616 524 dbSNP
rs968243635 526 dbSNP
rs1213011555 532 dbSNP
rs1250861710 541 dbSNP
rs28643273 543 dbSNP
rs1458953910 548 dbSNP
rs1323979137 550 dbSNP
rs1265308340 556 dbSNP
rs1178840283 561 dbSNP
rs979641353 566 dbSNP
rs1237250452 571 dbSNP
rs1433533797 577 dbSNP
rs1325240251 583 dbSNP
rs1318221354 588 dbSNP
rs1453909038 589 dbSNP
rs750235117 595 dbSNP
rs756033151 596 dbSNP
rs1428026132 600 dbSNP
rs1168033827 601 dbSNP
rs1468152294 606 dbSNP
rs780032996 611 dbSNP
rs573883200 616 dbSNP
rs1413904884 617 dbSNP
rs1192381662 619 dbSNP
rs116643398 637 dbSNP
rs1244680738 638 dbSNP
rs1202031458 639 dbSNP
rs532452160 641 dbSNP
rs1273935053 642 dbSNP
rs1402872638 648 dbSNP
rs917977036 651 dbSNP
rs377631159 655 dbSNP
rs1270194308 660 dbSNP
rs1247266507 662 dbSNP
rs940091424 665 dbSNP
rs554534198 684 dbSNP
rs919077505 693 dbSNP
rs778389236 700 dbSNP
rs1358272337 702 dbSNP
rs930484163 704 dbSNP
rs1378567689 721 dbSNP
rs1167273431 731 dbSNP
rs1232568711 742 dbSNP
rs1048966855 747 dbSNP
rs572779848 756 dbSNP
rs546947925 759 dbSNP
rs1319718102 762 dbSNP
rs889065106 763 dbSNP
rs1443757722 770 dbSNP
rs1233721740 778 dbSNP
rs551445441 779 dbSNP
rs565339852 781 dbSNP
rs1199108946 788 dbSNP
rs747803549 793 dbSNP
rs559589005 798 dbSNP
rs540321952 799 dbSNP
rs1237515578 810 dbSNP
rs188118585 820 dbSNP
rs1374507037 833 dbSNP
rs375511407 840 dbSNP
rs1186403356 842 dbSNP
rs1426487902 847 dbSNP
rs1443855823 849 dbSNP
rs968169265 857 dbSNP
rs1478353158 869 dbSNP
rs554235249 870 dbSNP
rs1001482796 882 dbSNP
rs1170334374 894 dbSNP
rs1161580058 897 dbSNP
rs193067416 898 dbSNP
rs1408359226 908 dbSNP
rs1179182643 910 dbSNP
rs959899526 914 dbSNP
rs1416337919 919 dbSNP
rs1335147337 924 dbSNP
rs992134972 925 dbSNP
rs1232487166 930 dbSNP
rs1200292968 938 dbSNP
rs537227729 939 dbSNP
rs917935199 947 dbSNP
rs184429999 960 dbSNP
rs1222318411 965 dbSNP
rs1413074251 1002 dbSNP
rs771493676 1008 dbSNP
rs1342224455 1010 dbSNP
rs1348145756 1014 dbSNP
rs1287295854 1018 dbSNP
rs1219186754 1020 dbSNP
rs1346841523 1022 dbSNP
rs920045035 1044 dbSNP
rs930454629 1048 dbSNP
rs1435601746 1052 dbSNP
rs1345601725 1053 dbSNP
rs1161072184 1076 dbSNP
rs1398718628 1087 dbSNP
rs985036664 1094 dbSNP
rs910429253 1095 dbSNP
rs1266795733 1096 dbSNP
rs943298080 1097 dbSNP
rs1486454704 1098 dbSNP
rs1040011544 1111 dbSNP
rs1214151991 1114 dbSNP
rs1201787725 1118 dbSNP
rs1278955735 1121 dbSNP
rs1485052981 1131 dbSNP
rs1208191286 1137 dbSNP
rs901504787 1142 dbSNP
rs1264717796 1148 dbSNP
rs878866916 1153 dbSNP
rs1280753469 1163 dbSNP
rs1478403901 1170 dbSNP
rs1218100065 1174 dbSNP
rs1193132358 1175 dbSNP
rs777295750 1176 dbSNP
rs1290548092 1177 dbSNP
rs1428464006 1182 dbSNP
rs577434485 1183 dbSNP
rs1387553906 1185 dbSNP
rs370146531 1185 dbSNP
rs1371663851 1187 dbSNP
rs541722893 1190 dbSNP
rs759644254 1191 dbSNP
rs1424805990 1193 dbSNP
rs1175496120 1197 dbSNP
rs1433098014 1205 dbSNP
rs1422341061 1206 dbSNP
rs903648863 1208 dbSNP
rs1300050121 1210 dbSNP
rs553746342 1233 dbSNP
rs1203928714 1237 dbSNP
rs574873672 1238 dbSNP
rs765441405 1251 dbSNP
rs1307563370 1252 dbSNP
rs1297645421 1258 dbSNP
rs1317606478 1262 dbSNP
rs1315430077 1263 dbSNP
rs895378992 1268 dbSNP
rs1014240558 1283 dbSNP
rs1324446356 1284 dbSNP
rs1025252897 1292 dbSNP
rs961364355 1303 dbSNP
rs1168966998 1311 dbSNP
rs1449343200 1312 dbSNP
rs1386280550 1314 dbSNP
rs150134295 1320 dbSNP
rs1027037211 1328 dbSNP
rs775474886 1330 dbSNP
rs1287485435 1333 dbSNP
rs1480682704 1337 dbSNP
rs1488352586 1351 dbSNP
rs1252509971 1355 dbSNP
rs1205034888 1359 dbSNP
rs952909233 1359 dbSNP
rs1292376570 1360 dbSNP
rs1260330010 1366 dbSNP
rs28546282 1367 dbSNP
rs1380300708 1370 dbSNP
rs1453679228 1374 dbSNP
rs369514171 1378 dbSNP
rs1199941424 1379 dbSNP
rs984616857 1387 dbSNP
rs1375646308 1391 dbSNP
rs910389097 1398 dbSNP
rs1160714177 1400 dbSNP
rs943247009 1403 dbSNP
rs1429161814 1408 dbSNP
rs1366798637 1414 dbSNP
rs975954087 1419 dbSNP
rs1423136221 1421 dbSNP
rs1368202935 1425 dbSNP
rs563749722 1438 dbSNP
rs1186432097 1448 dbSNP
rs1419265178 1449 dbSNP
rs1252197223 1451 dbSNP
rs923231146 1451 dbSNP
rs1482432542 1455 dbSNP
rs531055940 1468 dbSNP
rs1224540193 1477 dbSNP
rs1382788020 1478 dbSNP
rs1388454706 1480 dbSNP
rs1264584727 1486 dbSNP
rs117784619 1487 dbSNP
rs1370012417 1493 dbSNP
rs1438216300 1497 dbSNP
rs1346158421 1500 dbSNP
rs1403588702 1503 dbSNP
rs61435529 1503 dbSNP
rs1353779925 1504 dbSNP
rs1237782081 1514 dbSNP
rs1455647952 1519 dbSNP
rs562734730 1520 dbSNP
rs1365237451 1539 dbSNP
rs1156496632 1540 dbSNP
rs761043224 1541 dbSNP
rs903575089 1546 dbSNP
rs1258435614 1550 dbSNP
rs867539973 1552 dbSNP
rs1429307282 1554 dbSNP
rs936437984 1555 dbSNP
rs564603748 1559 dbSNP
rs1210982533 1560 dbSNP
rs1252719166 1563 dbSNP
rs1266549615 1564 dbSNP
rs1054909440 1566 dbSNP
rs1486723110 1573 dbSNP
rs532259265 1576 dbSNP
rs1227956146 1583 dbSNP
rs1324400742 1588 dbSNP
rs1180724022 1594 dbSNP
rs374728288 1599 dbSNP
rs1285231465 1606 dbSNP
rs1231122674 1616 dbSNP
rs1331089069 1617 dbSNP
rs768045292 1618 dbSNP
rs1384339384 1619 dbSNP
rs1383166895 1629 dbSNP
rs1013791102 1633 dbSNP
rs1179673680 1634 dbSNP
rs1025220855 1638 dbSNP
rs1459338794 1640 dbSNP
rs1429417159 1647 dbSNP
rs897419160 1659 dbSNP
rs547287140 1662 dbSNP
rs1377067819 1667 dbSNP
rs1193729754 1671 dbSNP
rs994130390 1677 dbSNP
rs1245913373 1678 dbSNP
rs1027004460 1679 dbSNP
rs1332944012 1686 dbSNP
rs1377094494 1687 dbSNP
rs565678655 1688 dbSNP
rs189140245 1691 dbSNP
rs1018384699 1694 dbSNP
rs547812247 1703 dbSNP
rs964899083 1705 dbSNP
rs1363490647 1721 dbSNP
rs533429729 1726 dbSNP
rs1453794627 1728 dbSNP
rs1406424887 1734 dbSNP
rs1335776634 1737 dbSNP
rs750228471 1738 dbSNP
rs1400804317 1741 dbSNP
rs60680549 1746 dbSNP
rs1463428257 1751 dbSNP
rs1388217831 1770 dbSNP
rs923159297 1771 dbSNP
rs766255366 1774 dbSNP
rs1333134967 1782 dbSNP
rs753802940 1783 dbSNP
rs368063472 1787 dbSNP
rs1441927619 1808 dbSNP
rs1273739498 1809 dbSNP
rs537168629 1811 dbSNP
rs558846888 1813 dbSNP
rs1274524928 1815 dbSNP
rs1247245824 1818 dbSNP
rs1385353537 1824 dbSNP
rs192392455 1825 dbSNP
rs1480398606 1826 dbSNP
rs1339395301 1828 dbSNP
rs1328990439 1836 dbSNP
rs1411101877 1841 dbSNP
rs966603719 1846 dbSNP
rs1167874808 1847 dbSNP
rs1194320466 1848 dbSNP
rs1386802216 1852 dbSNP
rs1161705173 1867 dbSNP
rs1233638671 1878 dbSNP
rs977705942 1884 dbSNP
rs535286012 1885 dbSNP
rs754947704 1886 dbSNP
rs1223800801 1902 dbSNP
rs1188547679 1903 dbSNP
rs184935809 1915 dbSNP
rs575245787 1932 dbSNP
rs535815343 1933 dbSNP
rs750725761 1938 dbSNP
rs1354916380 1939 dbSNP
rs747667977 1942 dbSNP
rs1307358941 1943 dbSNP
rs1055279124 1944 dbSNP
rs1351438226 1947 dbSNP
rs756428694 1947 dbSNP
rs949547817 1949 dbSNP
rs138776160 1951 dbSNP
rs1471658762 1952 dbSNP
rs1200818159 1953 dbSNP
rs1411268905 1953 dbSNP
rs1490994606 1957 dbSNP
rs761080589 1959 dbSNP
rs77398109 1960 dbSNP
rs74589886 1961 dbSNP
rs1048704054 1963 dbSNP
rs1284518855 1963 dbSNP
rs1326490612 1963 dbSNP
rs888427835 1967 dbSNP
rs1006932383 1971 dbSNP
rs1018767927 1972 dbSNP
rs965501350 1973 dbSNP
rs1272989616 1974 dbSNP
rs1345505311 1977 dbSNP
rs1435580805 1977 dbSNP
rs1221021861 1979 dbSNP
rs1455804176 1984 dbSNP
rs997267947 1986 dbSNP
rs1030141074 1987 dbSNP
rs1210248376 1987 dbSNP
rs1250239671 1987 dbSNP
rs34577641 1987 dbSNP
rs375700036 1987 dbSNP
rs542726971 1987 dbSNP
rs796883206 1987 dbSNP
rs1279187934 1988 dbSNP
rs1463301888 1990 dbSNP
rs1267077389 1993 dbSNP
rs1203818306 1995 dbSNP
rs1299111026 2005 dbSNP
rs560272930 2005 dbSNP
rs575602813 2007 dbSNP
rs1218525474 2027 dbSNP
rs1258042763 2029 dbSNP
rs1362437225 2041 dbSNP
rs1299597354 2050 dbSNP
rs1432606016 2052 dbSNP
rs777291529 2057 dbSNP
rs747315230 2058 dbSNP
rs925262275 2060 dbSNP
rs1210168036 2077 dbSNP
rs189455275 2078 dbSNP
rs1484621053 2080 dbSNP
rs11546363 2094 dbSNP
rs201141795 2099 dbSNP
rs1453799769 2100 dbSNP
rs1187122937 2101 dbSNP
rs180994271 2106 dbSNP
rs1427755260 2107 dbSNP
rs1167865274 2108 dbSNP
rs1247101753 2110 dbSNP
rs1182015456 2136 dbSNP
rs186416774 2140 dbSNP
rs1253701545 2145 dbSNP
rs1208775706 2150 dbSNP
rs957931414 2153 dbSNP
rs1276671182 2177 dbSNP
rs1225982766 2183 dbSNP
rs990506149 2186 dbSNP
rs1379077950 2189 dbSNP
rs1341110410 2194 dbSNP
rs1316006350 2198 dbSNP
rs1397960221 2206 dbSNP
rs1377114749 2210 dbSNP
rs540854587 2226 dbSNP
rs949134316 2232 dbSNP
rs1373010590 2237 dbSNP
rs1373120117 2239 dbSNP
rs1167260289 2240 dbSNP
rs1402359787 2248 dbSNP
rs1046572385 2251 dbSNP
rs375148853 2276 dbSNP
rs918745572 2280 dbSNP
rs559205529 2283 dbSNP
rs930152130 2285 dbSNP
rs1049120871 2294 dbSNP
rs189450623 2298 dbSNP
rs746348302 2299 dbSNP
rs1361678062 2315 dbSNP
rs1202858828 2319 dbSNP
rs1341220572 2325 dbSNP
rs1265774182 2326 dbSNP
rs1213244352 2335 dbSNP
rs1320196390 2340 dbSNP
rs1303863828 2343 dbSNP
rs1312264119 2346 dbSNP
rs547752744 2353 dbSNP
rs1352342471 2354 dbSNP
rs1306734666 2358 dbSNP
rs563296148 2359 dbSNP
rs770473778 2366 dbSNP
rs1233871770 2375 dbSNP
rs1295702973 2378 dbSNP
rs1007269629 2390 dbSNP
rs1366418501 2396 dbSNP
rs1278232449 2405 dbSNP
rs775629332 2410 dbSNP
rs765344953 2416 dbSNP
rs77773804 2419 dbSNP
rs552249722 2420 dbSNP
rs1020356860 2434 dbSNP
rs1267949318 2442 dbSNP
rs966511410 2446 dbSNP
rs1487380966 2456 dbSNP
rs774457554 2457 dbSNP
rs570483991 2459 dbSNP
rs1209535121 2464 dbSNP
rs1032637262 2465 dbSNP
rs181244314 2467 dbSNP
rs1227838307 2471 dbSNP
rs185703139 2478 dbSNP
rs201999543 2479 dbSNP
rs568743844 2486 dbSNP
rs1457403314 2487 dbSNP
rs1156386314 2489 dbSNP
rs536159992 2492 dbSNP
rs1378203139 2494 dbSNP
rs1392693149 2495 dbSNP
rs1421047629 2501 dbSNP
rs557033360 2502 dbSNP
rs1209088010 2505 dbSNP
rs371799552 2506 dbSNP
rs981839163 2507 dbSNP
rs777661380 2509 dbSNP
rs1345043097 2512 dbSNP
rs918380410 2513 dbSNP
rs930122350 2517 dbSNP
rs1258298208 2521 dbSNP
rs575585270 2530 dbSNP
rs539495023 2532 dbSNP
rs529998412 2534 dbSNP
rs1298857820 2537 dbSNP
rs766129925 2538 dbSNP
rs1318123725 2543 dbSNP
rs73713520 2549 dbSNP
rs908999096 2558 dbSNP
rs1174269857 2561 dbSNP
rs940544350 2568 dbSNP
rs1224471465 2571 dbSNP
rs1283659068 2581 dbSNP
rs14933 2582 dbSNP
rs1451091763 2593 dbSNP
rs1246426951 2609 dbSNP
rs573290123 2611 dbSNP
rs1213526786 2612 dbSNP
rs540791355 2629 dbSNP
rs949345800 2630 dbSNP
rs1267032522 2633 dbSNP
rs901170904 2636 dbSNP
rs754148945 2638 dbSNP
rs753681886 2643 dbSNP
rs373957557 2644 dbSNP
rs1041775219 2651 dbSNP
rs1231163273 2658 dbSNP
rs559142235 2671 dbSNP
rs1340400813 2680 dbSNP
rs574343000 2682 dbSNP
rs1429533565 2686 dbSNP
rs904865430 2687 dbSNP
rs903281185 2688 dbSNP
rs1473001505 2690 dbSNP
rs1374845061 2695 dbSNP
rs999724840 2704 dbSNP
rs759453742 2707 dbSNP
rs1388035833 2709 dbSNP
rs541728378 2719 dbSNP
rs1473269798 2725 dbSNP
rs1239411933 2731 dbSNP
rs1185589970 2733 dbSNP
rs893685179 2736 dbSNP
rs145529269 2738 dbSNP
rs138218250 2740 dbSNP
rs149551836 2741 dbSNP
rs1274320281 2743 dbSNP
rs981809659 2760 dbSNP
rs1356680007 2763 dbSNP
rs901421749 2764 dbSNP
rs1241988138 2765 dbSNP
rs1461200058 2774 dbSNP
rs1324138869 2775 dbSNP
rs997133683 2784 dbSNP
rs1028705489 2786 dbSNP
rs1411537322 2792 dbSNP
rs757856846 2797 dbSNP
rs1025364662 2798 dbSNP
rs951114047 2799 dbSNP
rs564176437 2803 dbSNP
rs190510265 2806 dbSNP
rs1279086764 2807 dbSNP
rs1472519371 2818 dbSNP
rs377378856 2819 dbSNP
rs1185013034 2820 dbSNP
rs1471920412 2833 dbSNP
rs1251707723 2836 dbSNP
rs961466613 2851 dbSNP
rs144307215 2858 dbSNP
rs1291594956 2859 dbSNP
rs1207644980 2868 dbSNP
rs1335246161 2869 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545215. RNA binding protein: AGO4. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545215
Method / RBP PAR-CLIP / AGO4
Cell line / Condition HEK293 / Control
Location of target site ENST00000394163.2 | 3UTR | AAAAAACCAUACACACACACACACAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
62 hsa-miR-758-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT085323 MORC3 MORC family CW-type zinc finger 3 2 2
MIRT089441 STAMBP STAM binding protein 2 2
MIRT089456 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT111856 CCND1 cyclin D1 2 2
MIRT184933 ZNF268 zinc finger protein 268 2 2
MIRT215288 CREBRF CREB3 regulatory factor 2 2
MIRT237300 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT238446 MYO10 myosin X 2 4
MIRT273827 RPL41 ribosomal protein L41 2 2
MIRT282703 HOOK1 hook microtubule tethering protein 1 2 2
MIRT347970 ZNF850 zinc finger protein 850 2 2
MIRT371076 KLF3 Kruppel like factor 3 2 2
MIRT464339 USP6NL USP6 N-terminal like 2 2
MIRT470034 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT477506 ELL2 elongation factor for RNA polymerase II 2 2 2
MIRT482886 CACNA2D3 calcium voltage-gated channel auxiliary subunit alpha2delta 3 2 2
MIRT492606 POLR3E RNA polymerase III subunit E 2 2
MIRT502294 GNG12 G protein subunit gamma 12 2 6
MIRT507600 DCTN4 dynactin subunit 4 2 4
MIRT510728 SON SON DNA binding protein 2 6
MIRT514065 KCNJ6 potassium voltage-gated channel subfamily J member 6 2 8
MIRT519718 ZNF512B zinc finger protein 512B 2 4
MIRT520890 STRN striatin 2 2
MIRT521760 PPIL1 peptidylprolyl isomerase like 1 2 6
MIRT526874 ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit 2 2
MIRT530232 WSB2 WD repeat and SOCS box containing 2 2 2
MIRT532003 ACTR2 ARP2 actin related protein 2 homolog 2 2
MIRT533371 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 4
MIRT547106 PIGW phosphatidylinositol glycan anchor biosynthesis class W 2 2
MIRT548189 FOXA1 forkhead box A1 2 2
MIRT552935 VKORC1L1 vitamin K epoxide reductase complex subunit 1 like 1 2 2
MIRT560085 ZNF195 zinc finger protein 195 2 2
MIRT561726 PPP2CA protein phosphatase 2 catalytic subunit alpha 2 2
MIRT562713 ZNF415 zinc finger protein 415 2 2
MIRT562761 ZNF846 zinc finger protein 846 2 2
MIRT564159 ZNF117 zinc finger protein 117 2 2
MIRT565673 SETD5 SET domain containing 5 2 2
MIRT565718 SESN3 sestrin 3 2 2
MIRT566026 RFX1 regulatory factor X1 2 2
MIRT569048 ZNF655 zinc finger protein 655 2 2
MIRT570367 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 2
MIRT570410 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 2
MIRT570443 TMEM189 transmembrane protein 189 2 2
MIRT571738 RNF11 ring finger protein 11 2 2
MIRT575042 Tpgs2 tubulin polyglutamylase complex subunit 2 2 4
MIRT614330 ZDHHC22 zinc finger DHHC-type containing 22 2 2
MIRT617629 RAB3IP RAB3A interacting protein 2 2
MIRT621667 UBE4B ubiquitination factor E4B 2 2
MIRT639906 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT651436 XRCC5 X-ray repair cross complementing 5 2 2
MIRT683853 ZNF208 zinc finger protein 208 2 2
MIRT684841 TPGS2 tubulin polyglutamylase complex subunit 2 2 5
MIRT689347 ZNF83 zinc finger protein 83 2 2
MIRT692492 SPIN4 spindlin family member 4 2 2
MIRT695711 OLA1 Obg like ATPase 1 2 2
MIRT698219 TMEM248 transmembrane protein 248 2 2
MIRT711560 FAM20B FAM20B, glycosaminoglycan xylosylkinase 2 2
MIRT712867 TMEM67 transmembrane protein 67 2 2
MIRT722956 TSPAN1 tetraspanin 1 2 2
MIRT723622 SOBP sine oculis binding protein homolog 2 2
MIRT724176 ABCF2 ATP binding cassette subfamily F member 2 2 2
MIRT755363 LMBR1 limb development membrane protein 1 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-758 Hydroxycamptothecin (HCPT) NULL 97226 Microarray human Tenon's fibroblasts (HTFs) 24681041 2014 down-regulated
miR-758 Diethylstilbestrol approved 448537 Microarray mammosphere-derived epithelial cells (MDEC) 19549897 2009 up-regulated
miR-758 5-Fluorouracil approved 3385 Quantitative real-time PCR human squamous cell carcinoma cell line KYSE410 21743970 2011 up-regulated
miR-758 Reversine NULL 210332 Microarray C2C12 myoblast cells 24513286 2014 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-758 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-758 Fluorouracil 3385 NSC19893 approved resistant cell line (KYSE)
hsa-mir-758 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-758-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-758-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-758-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-758-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (BAS)
hsa-miR-758-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (BAS)
hsa-miR-758-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-758-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-758-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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