miRTarBase - #MIRT569289


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pre-miRNA Information
pre-miRNA hsa-mir-4667   
Genomic Coordinates chr9: 35608094 - 35608159
Description Homo sapiens miR-4667 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4667-3p
Sequence 46| UCCCUCCUUCUGUCCCCACAG |66
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM9588049 20 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs774051936 3 dbSNP
rs1178819936 5 dbSNP
rs1467653371 6 dbSNP
rs770405488 6 dbSNP
rs776175657 7 dbSNP
rs370758546 11 dbSNP
rs1341648855 13 dbSNP
rs1023852947 14 dbSNP
rs374809971 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SLC35C2   
Synonyms BA394O2.1, C20orf5, CGI-15, OVCOV1
Description solute carrier family 35 member C2
Transcript NM_015945   
Other Transcripts NM_173073 , NM_173179   
Expression
Putative miRNA Targets on SLC35C2
3'UTR of SLC35C2
(miRNA target sites are highlighted)		 
>SLC35C2|NM_015945|3'UTR
   1 CCAGCCAGGGCAAATGGCTTAGAAGCAGGCCACTCCCCAGCCTGCTGCCAGCACTCACTGTGCTCAAGCCGCCAGGGCTC
  81 ATCATGGTAGCTGGGAGCTGTGGACGGGAGTCACCAGGTGGTGGGGCCAAGCCAGGGACTCATGACTTTTGCCCCTCCCT
 161 TCAGAGCCTGGTCACACAAGGGGCGAGCACCAGGCCAGCCTGGGACTGGCCAGAGCTGGGCCCAAGCTGCGCTGGAATCG
 241 CAGCAGGAGAGGGGAGTGGGCTGGTTCTTCCCACCACTTCCCAGGCTCTGACAGCCGAGACTCATTTCCAAGGCACAGCA
 321 GCTTTCTAAAGGGACTGAGTTTGGACTGGGTTTTGGACCTCCAGGGGCTGGAGCTTCATCACCTGGGCAGTGTCTTTTCT
 401 CAGAGAGCAGGTTTCTTTATAGTTTGGAAATAAATGGTTCACGGTCCACTGGCCGCCTTGTGTTGCTGGAGACGTGGGGG
 481 CAGGGAGGGGACAGTGTGGGCCTGGCCTCTCCTTTCCTTTCCCTGCCTGGAGCCTTCTTCAAATGTCTGGTCTTAAGCCA
 561 GGCCTCCTTCATTTTCTCGCTCCTGTTAGAACACCAGTCCCCTCCCCAGTGGGGCCCCACTGCACCTGCTGGCAGGAAAT
 641 AAATGAATGTTTACTGAGTACTGCATTCTGGAGACCTTACATGTTTTCACAGCCTAGTTTGAATACTGGCTTTGTCACTA
 721 GCTGTGTGACCCTAAGCAAATGACCTAACCTGTCTGTGCCGTAGTTTTTTAATCTGTGAAATGGGGATAATGTCTATCTC
 801 AGAGTCCTTTTGAAGATTGAGTCATTATTAGTAACAGATTAAATGTTATATAAGCATTTCTTTTAAAAAAAAAAAAAAAA
 881 AA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaCACCCCUGUCUUCCUCCCu 5'
            ||||||:|  |:|||||| 
Target 5' acGTGGGGGC--AGGGAGGGg 3'
 472 - 490 155.00 -31.70
2 
miRNA  3' gacaccccUGUCUUCCUCCCu 5'
                  :||| ||||| | 
Target 5' ctggaatcGCAGCAGGAGAGg 3'
 232 - 252 121.00 -16.60
3 
miRNA  3' gacACCCCUGUCUUCCUCCCu 5'
             |||  ||| ||||:| | 
Target 5' gccTGGTCACACAAGGGGCGa 3'
 166 - 186 118.00 -12.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30539587 6 COSMIC
COSN30168611 34 COSMIC
COSN30454562 37 COSMIC
COSN30527425 59 COSMIC
COSN30479851 86 COSMIC
COSN30135642 103 COSMIC
COSN31511103 110 COSMIC
COSN30469303 159 COSMIC
COSN28871325 194 COSMIC
COSN32058138 240 COSMIC
COSN28191413 276 COSMIC
COSN5444757 550 COSMIC
COSN31570579 642 COSMIC
COSN31563153 736 COSMIC
COSN26519947 1382 COSMIC
COSN5972227 2344 COSMIC
COSN7094299 2585 COSMIC
COSN10016674 2632 COSMIC
COSN22774944 2779 COSMIC
COSN31621977 2848 COSMIC
COSN16149518 3415 COSMIC
COSN9130490 4075 COSMIC
COSN1249554 4118 COSMIC
COSN1249553 4328 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1281638621 7 dbSNP
rs193088910 8 dbSNP
rs746200872 10 dbSNP
rs774814396 11 dbSNP
rs770509342 17 dbSNP
rs533185342 22 dbSNP
rs1010776435 24 dbSNP
rs559541892 25 dbSNP
rs755640907 32 dbSNP
rs748135961 33 dbSNP
rs369773784 35 dbSNP
rs754871054 36 dbSNP
rs751379736 44 dbSNP
rs1411000260 47 dbSNP
rs766141800 48 dbSNP
rs1481570878 50 dbSNP
rs1414061846 51 dbSNP
rs878910362 53 dbSNP
rs541326676 54 dbSNP
rs1038949504 56 dbSNP
rs573843788 60 dbSNP
rs1256080573 62 dbSNP
rs1469817434 65 dbSNP
rs942689099 69 dbSNP
rs1252499060 70 dbSNP
rs528662215 71 dbSNP
rs891137807 74 dbSNP
rs1251104220 76 dbSNP
rs945295071 86 dbSNP
rs1484137925 87 dbSNP
rs1169083819 89 dbSNP
rs374538385 105 dbSNP
rs1051104688 106 dbSNP
rs1325969905 111 dbSNP
rs570927708 114 dbSNP
rs930052979 128 dbSNP
rs918729099 132 dbSNP
rs974639260 142 dbSNP
rs1271594294 145 dbSNP
rs1362332162 146 dbSNP
rs921042822 151 dbSNP
rs188561875 159 dbSNP
rs1291932628 164 dbSNP
rs576119091 168 dbSNP
rs1233862939 171 dbSNP
rs1272582058 178 dbSNP
rs879919204 180 dbSNP
rs557445187 183 dbSNP
rs1242918511 184 dbSNP
rs966217011 189 dbSNP
rs370708223 191 dbSNP
rs11553725 196 dbSNP
rs114009214 197 dbSNP
rs1475803473 198 dbSNP
rs553143886 203 dbSNP
rs1027653272 207 dbSNP
rs994872416 211 dbSNP
rs1319793303 216 dbSNP
rs1345399349 220 dbSNP
rs966856763 225 dbSNP
rs1457706349 230 dbSNP
rs1348566629 231 dbSNP
rs1167552898 233 dbSNP
rs76992490 240 dbSNP
rs1011136269 245 dbSNP
rs900359348 256 dbSNP
rs1354254722 262 dbSNP
rs1225536958 267 dbSNP
rs1004053843 268 dbSNP
rs750739445 270 dbSNP
rs1008785585 280 dbSNP
rs1251500152 296 dbSNP
rs1190900036 297 dbSNP
rs1487630998 299 dbSNP
rs1042617052 302 dbSNP
rs1236240056 303 dbSNP
rs1471472615 308 dbSNP
rs1274754270 317 dbSNP
rs145996776 326 dbSNP
rs370716806 338 dbSNP
rs1009484519 350 dbSNP
rs1156481128 351 dbSNP
rs528928729 351 dbSNP
rs891086946 356 dbSNP
rs893759835 367 dbSNP
rs1333341812 371 dbSNP
rs1051052820 372 dbSNP
rs1444353872 387 dbSNP
rs930027286 391 dbSNP
rs932343917 402 dbSNP
rs1376295135 415 dbSNP
rs920949519 419 dbSNP
rs1282759157 430 dbSNP
rs1317045829 431 dbSNP
rs1210616298 436 dbSNP
rs1348971899 436 dbSNP
rs897228963 437 dbSNP
rs1038482281 442 dbSNP
rs567842932 454 dbSNP
rs1176325071 455 dbSNP
rs1328301120 461 dbSNP
rs531228208 473 dbSNP
rs916770109 476 dbSNP
rs1157664319 481 dbSNP
rs1055347642 490 dbSNP
rs939593151 493 dbSNP
rs984062983 502 dbSNP
rs537068397 509 dbSNP
rs978160810 515 dbSNP
rs1175470639 517 dbSNP
rs920874924 520 dbSNP
rs1431606899 522 dbSNP
rs1255160490 527 dbSNP
rs1193992992 532 dbSNP
rs973383441 533 dbSNP
rs1341935723 546 dbSNP
rs1196826912 550 dbSNP
rs1272927617 558 dbSNP
rs1456874851 561 dbSNP
rs570038575 566 dbSNP
rs914959248 568 dbSNP
rs989256525 573 dbSNP
rs1246096585 579 dbSNP
rs1454424218 580 dbSNP
rs964488497 586 dbSNP
rs1033693200 588 dbSNP
rs1296280322 589 dbSNP
rs551907050 591 dbSNP
rs113908366 595 dbSNP
rs1464056325 606 dbSNP
rs1230483616 615 dbSNP
rs1327968124 616 dbSNP
rs1386375747 619 dbSNP
rs1395350703 619 dbSNP
rs1313562328 620 dbSNP
rs1226051209 633 dbSNP
rs1228609964 644 dbSNP
rs1017392982 657 dbSNP
rs562454763 658 dbSNP
rs1303759570 664 dbSNP
rs1316570935 680 dbSNP
rs183068226 681 dbSNP
rs1274465779 706 dbSNP
rs954619951 707 dbSNP
rs1208814950 709 dbSNP
rs80231350 710 dbSNP
rs1384362049 713 dbSNP
rs1386344104 724 dbSNP
rs559627556 728 dbSNP
rs994563525 733 dbSNP
rs147273359 742 dbSNP
rs1464643791 747 dbSNP
rs1422700565 749 dbSNP
rs1038840216 760 dbSNP
rs1005637555 761 dbSNP
rs1418589752 769 dbSNP
rs118083022 772 dbSNP
rs748790791 780 dbSNP
rs1387396741 782 dbSNP
rs774873467 786 dbSNP
rs1383037722 792 dbSNP
rs192730152 794 dbSNP
rs1338945903 795 dbSNP
rs1417110963 796 dbSNP
rs1294460578 797 dbSNP
rs73908692 798 dbSNP
rs1243430963 808 dbSNP
rs1042671774 817 dbSNP
rs879032512 827 dbSNP
rs1263232893 831 dbSNP
rs1352372263 833 dbSNP
rs1216920043 834 dbSNP
rs945006222 835 dbSNP
rs1487192409 840 dbSNP
rs1189894982 849 dbSNP
rs1198210770 860 dbSNP
rs1423230911 861 dbSNP
rs1185481175 864 dbSNP
rs1041108469 865 dbSNP
rs914930024 867 dbSNP
rs1454467172 879 dbSNP
rs943798495 881 dbSNP
rs186547699 885 dbSNP
rs1313945937 886 dbSNP
rs1379068705 889 dbSNP
rs1394856196 905 dbSNP
rs908321011 907 dbSNP
rs989594038 911 dbSNP
rs1203914806 916 dbSNP
rs1337038178 917 dbSNP
rs1339650740 918 dbSNP
rs1240345226 922 dbSNP
rs868028273 924 dbSNP
rs964437202 925 dbSNP
rs1230112096 928 dbSNP
rs1212735787 929 dbSNP
rs1296244620 950 dbSNP
rs929482862 951 dbSNP
rs1327499725 953 dbSNP
rs1252699469 954 dbSNP
rs551468852 955 dbSNP
rs145347854 959 dbSNP
rs1378695696 961 dbSNP
rs954568282 968 dbSNP
rs545535584 969 dbSNP
rs1313561857 977 dbSNP
rs571808745 978 dbSNP
rs938252813 980 dbSNP
rs1397923797 985 dbSNP
rs926608282 989 dbSNP
rs961635725 996 dbSNP
rs1169403283 1008 dbSNP
rs4809588 1012 dbSNP
rs988263771 1017 dbSNP
rs1006001173 1019 dbSNP
rs182273368 1024 dbSNP
rs1388325762 1028 dbSNP
rs1032145563 1031 dbSNP
rs1198077055 1039 dbSNP
rs1055241598 1046 dbSNP
rs115638072 1047 dbSNP
rs906709829 1055 dbSNP
rs1424825010 1056 dbSNP
rs1481846598 1056 dbSNP
rs1274726819 1069 dbSNP
rs1173067900 1080 dbSNP
rs1424952071 1083 dbSNP
rs1043008207 1084 dbSNP
rs555809059 1102 dbSNP
rs1397540689 1103 dbSNP
rs1442588352 1107 dbSNP
rs1019271084 1108 dbSNP
rs35532576 1111 dbSNP
rs1366562767 1116 dbSNP
rs1340573468 1118 dbSNP
rs945649086 1119 dbSNP
rs1008338903 1121 dbSNP
rs1231922955 1124 dbSNP
rs893428125 1125 dbSNP
rs1318489780 1127 dbSNP
rs1357926539 1129 dbSNP
rs1256197959 1134 dbSNP
rs537704603 1137 dbSNP
rs1222496118 1142 dbSNP
rs1246339454 1144 dbSNP
rs943077968 1152 dbSNP
rs570074097 1157 dbSNP
rs987195487 1158 dbSNP
rs899298540 1159 dbSNP
rs1477757802 1163 dbSNP
rs1169192056 1171 dbSNP
rs933131277 1172 dbSNP
rs1331201672 1173 dbSNP
rs1410322470 1176 dbSNP
rs919100827 1177 dbSNP
rs1164945342 1178 dbSNP
rs374400066 1178 dbSNP
rs540140159 1178 dbSNP
rs558172531 1178 dbSNP
rs963319312 1184 dbSNP
rs189827819 1187 dbSNP
rs984105881 1192 dbSNP
rs949389865 1204 dbSNP
rs959392067 1205 dbSNP
rs1228962301 1214 dbSNP
rs186207126 1221 dbSNP
rs547601469 1225 dbSNP
rs1003645235 1230 dbSNP
rs148518390 1233 dbSNP
rs1234243008 1234 dbSNP
rs79704380 1235 dbSNP
rs1032135720 1236 dbSNP
rs1021128830 1239 dbSNP
rs568216342 1256 dbSNP
rs759174846 1258 dbSNP
rs975253489 1262 dbSNP
rs1181902315 1272 dbSNP
rs1403190161 1278 dbSNP
rs1010182304 1279 dbSNP
rs894054083 1280 dbSNP
rs1054468448 1289 dbSNP
rs1418856083 1290 dbSNP
rs943025533 1294 dbSNP
rs1274408557 1295 dbSNP
rs888800689 1296 dbSNP
rs1377110982 1299 dbSNP
rs144124206 1304 dbSNP
rs1025316583 1332 dbSNP
rs531495544 1334 dbSNP
rs116310104 1336 dbSNP
rs1037860693 1342 dbSNP
rs1210054820 1348 dbSNP
rs938183138 1354 dbSNP
rs905377587 1364 dbSNP
rs971922233 1368 dbSNP
rs114288338 1399 dbSNP
rs541672311 1400 dbSNP
rs560006852 1403 dbSNP
rs1052422422 1404 dbSNP
rs991414998 1410 dbSNP
rs1323600377 1412 dbSNP
rs959335201 1419 dbSNP
rs541882195 1428 dbSNP
rs879377758 1437 dbSNP
rs1310161538 1439 dbSNP
rs982156880 1443 dbSNP
rs970828515 1456 dbSNP
rs1455182666 1457 dbSNP
rs1238306085 1470 dbSNP
rs1409450236 1472 dbSNP
rs1158650380 1474 dbSNP
rs1276922687 1483 dbSNP
rs1477460949 1486 dbSNP
rs1219083157 1495 dbSNP
rs975199783 1501 dbSNP
rs1021495949 1502 dbSNP
rs912412218 1505 dbSNP
rs1238312012 1506 dbSNP
rs1457005444 1510 dbSNP
rs1470157868 1519 dbSNP
rs987088151 1523 dbSNP
rs77941289 1525 dbSNP
rs893994033 1526 dbSNP
rs1025307281 1530 dbSNP
rs1184915707 1537 dbSNP
rs776390643 1539 dbSNP
rs995200390 1540 dbSNP
rs149543381 1545 dbSNP
rs1034076231 1553 dbSNP
rs1331961205 1553 dbSNP
rs183435328 1557 dbSNP
rs905322824 1560 dbSNP
rs1219808867 1567 dbSNP
rs1046559790 1570 dbSNP
rs1316754280 1570 dbSNP
rs1196304238 1572 dbSNP
rs142632992 1572 dbSNP
rs1014248959 1574 dbSNP
rs892754808 1591 dbSNP
rs191843367 1600 dbSNP
rs1244811863 1611 dbSNP
rs1301585064 1613 dbSNP
rs1171333052 1616 dbSNP
rs1422921935 1625 dbSNP
rs1464140860 1652 dbSNP
rs186776979 1653 dbSNP
rs997632414 1660 dbSNP
rs539824471 1665 dbSNP
rs1386474668 1666 dbSNP
rs544222375 1675 dbSNP
rs369488538 1680 dbSNP
rs942808402 1681 dbSNP
rs1278137816 1691 dbSNP
rs941847358 1694 dbSNP
rs1428479814 1699 dbSNP
rs986690604 1700 dbSNP
rs909054898 1701 dbSNP
rs535894397 1702 dbSNP
rs1055678863 1706 dbSNP
rs1208891457 1712 dbSNP
rs937247363 1713 dbSNP
rs1373229856 1716 dbSNP
rs138097854 1723 dbSNP
rs962341512 1724 dbSNP
rs1034022873 1725 dbSNP
rs1454454100 1730 dbSNP
rs549946991 1731 dbSNP
rs982104491 1732 dbSNP
rs1369153202 1734 dbSNP
rs1001651286 1748 dbSNP
rs1161686367 1749 dbSNP
rs1362782648 1755 dbSNP
rs971207541 1760 dbSNP
rs1474690756 1762 dbSNP
rs531530963 1770 dbSNP
rs1359152617 1776 dbSNP
rs1025553999 1779 dbSNP
rs913974702 1792 dbSNP
rs988644587 1793 dbSNP
rs368117071 1797 dbSNP
rs771917917 1802 dbSNP
rs1052614889 1805 dbSNP
rs1285109180 1807 dbSNP
rs1484826018 1811 dbSNP
rs1001086977 1812 dbSNP
rs540130917 1813 dbSNP
rs1423334992 1821 dbSNP
rs552018954 1822 dbSNP
rs527312046 1823 dbSNP
rs1382399817 1824 dbSNP
rs1440592358 1825 dbSNP
rs1270745095 1832 dbSNP
rs1359051532 1838 dbSNP
rs6124787 1840 dbSNP
rs1446652187 1842 dbSNP
rs34658867 1849 dbSNP
rs1303935264 1853 dbSNP
rs1314195046 1854 dbSNP
rs541571121 1855 dbSNP
rs1240456346 1859 dbSNP
rs1369593993 1860 dbSNP
rs1030566372 1864 dbSNP
rs929801541 1865 dbSNP
rs529786191 1866 dbSNP
rs973950824 1869 dbSNP
rs1422254018 1880 dbSNP
rs1187682678 1890 dbSNP
rs941259085 1891 dbSNP
rs926941956 1894 dbSNP
rs897500129 1897 dbSNP
rs546869759 1898 dbSNP
rs1406152609 1905 dbSNP
rs879623966 1906 dbSNP
rs1177318915 1917 dbSNP
rs1377550817 1929 dbSNP
rs1465030373 1930 dbSNP
rs1486096145 1937 dbSNP
rs545895784 1938 dbSNP
rs576842730 1939 dbSNP
rs1309111701 1942 dbSNP
rs1311511069 1945 dbSNP
rs1273454021 1948 dbSNP
rs1055626367 1951 dbSNP
rs937196406 1952 dbSNP
rs1198181267 1953 dbSNP
rs1294551530 1956 dbSNP
rs564783008 1957 dbSNP
rs1414912459 1962 dbSNP
rs1489625488 1964 dbSNP
rs988986361 1965 dbSNP
rs1267138738 1971 dbSNP
rs956842112 1977 dbSNP
rs1031137808 1978 dbSNP
rs1349473090 1988 dbSNP
rs1169216064 1992 dbSNP
rs1465679891 1992 dbSNP
rs181141327 1993 dbSNP
rs1045706659 1998 dbSNP
rs1459166016 2000 dbSNP
rs949385121 2001 dbSNP
rs913895216 2017 dbSNP
rs572350218 2018 dbSNP
rs988209755 2020 dbSNP
rs1280030091 2038 dbSNP
rs554092808 2045 dbSNP
rs13037591 2048 dbSNP
rs574856542 2052 dbSNP
rs1222633566 2053 dbSNP
rs1265162181 2054 dbSNP
rs540051701 2056 dbSNP
rs1477803838 2058 dbSNP
rs1051158649 2062 dbSNP
rs74656191 2063 dbSNP
rs1030513862 2064 dbSNP
rs1250062412 2066 dbSNP
rs1422495959 2072 dbSNP
rs998198357 2076 dbSNP
rs1038247841 2077 dbSNP
rs1481751468 2086 dbSNP
rs1268454995 2092 dbSNP
rs1381442601 2093 dbSNP
rs78610805 2102 dbSNP
rs1015009951 2110 dbSNP
rs1005917246 2111 dbSNP
rs887522261 2114 dbSNP
rs1219210909 2118 dbSNP
rs1287253982 2122 dbSNP
rs1034123661 2123 dbSNP
rs1214313442 2126 dbSNP
rs1239795847 2128 dbSNP
rs980159283 2130 dbSNP
rs949725975 2131 dbSNP
rs1233351163 2134 dbSNP
rs879677452 2134 dbSNP
rs1442436045 2136 dbSNP
rs1001354485 2137 dbSNP
rs907048571 2138 dbSNP
rs1399975593 2152 dbSNP
rs1045627691 2158 dbSNP
rs1316154804 2162 dbSNP
rs1360885671 2163 dbSNP
rs552057726 2164 dbSNP
rs533797304 2165 dbSNP
rs1380831270 2167 dbSNP
rs1242616665 2175 dbSNP
rs945963266 2178 dbSNP
rs1373633866 2191 dbSNP
rs1299057395 2206 dbSNP
rs891746018 2209 dbSNP
rs566384566 2210 dbSNP
rs1281329210 2211 dbSNP
rs74176866 2211 dbSNP
rs1052863151 2214 dbSNP
rs1210168411 2215 dbSNP
rs548163632 2218 dbSNP
rs1323886042 2219 dbSNP
rs1224208169 2223 dbSNP
rs1273985596 2223 dbSNP
rs1440675797 2224 dbSNP
rs1392887114 2225 dbSNP
rs1232924341 2228 dbSNP
rs1462433144 2232 dbSNP
rs1156666476 2233 dbSNP
rs1363244417 2234 dbSNP
rs1157046069 2236 dbSNP
rs1415022893 2241 dbSNP
rs1175742947 2245 dbSNP
rs1421068758 2248 dbSNP
rs1449188349 2250 dbSNP
rs1409041556 2251 dbSNP
rs968252474 2256 dbSNP
rs925359647 2257 dbSNP
rs986194317 2259 dbSNP
rs932130618 2260 dbSNP
rs529779186 2268 dbSNP
rs1261897931 2269 dbSNP
rs1320822167 2272 dbSNP
rs976325438 2280 dbSNP
rs897275731 2295 dbSNP
rs562588382 2297 dbSNP
rs550658662 2307 dbSNP
rs1179368934 2322 dbSNP
rs115684173 2323 dbSNP
rs905715791 2324 dbSNP
rs1198605787 2326 dbSNP
rs564622121 2338 dbSNP
rs546527637 2341 dbSNP
rs950018952 2342 dbSNP
rs535443576 2343 dbSNP
rs572698372 2344 dbSNP
rs1408478407 2352 dbSNP
rs1306105383 2363 dbSNP
rs1325883353 2364 dbSNP
rs191264571 2365 dbSNP
rs1384917682 2367 dbSNP
rs1001303565 2369 dbSNP
rs1281919928 2372 dbSNP
rs1343011675 2382 dbSNP
rs1219903548 2390 dbSNP
rs1251435370 2397 dbSNP
rs925734356 2401 dbSNP
rs907001289 2402 dbSNP
rs1455457428 2403 dbSNP
rs1291674451 2419 dbSNP
rs1024550464 2425 dbSNP
rs867004611 2427 dbSNP
rs373197624 2428 dbSNP
rs985689999 2429 dbSNP
rs891687832 2436 dbSNP
rs1372597832 2438 dbSNP
rs1029654933 2448 dbSNP
rs185800037 2449 dbSNP
rs994197076 2457 dbSNP
rs1424423274 2466 dbSNP
rs936645106 2470 dbSNP
rs903879517 2473 dbSNP
rs961433544 2474 dbSNP
rs1050428585 2476 dbSNP
rs1295631948 2487 dbSNP
rs932078641 2491 dbSNP
rs1303202846 2497 dbSNP
rs1259617654 2499 dbSNP
rs1224716374 2501 dbSNP
rs1206357234 2502 dbSNP
rs1359793050 2503 dbSNP
rs1244932560 2507 dbSNP
rs923416786 2538 dbSNP
rs1017008919 2550 dbSNP
rs1489200748 2555 dbSNP
rs1405356414 2556 dbSNP
rs1261062779 2564 dbSNP
rs73303964 2569 dbSNP
rs940894649 2570 dbSNP
rs908108377 2572 dbSNP
rs1044625304 2579 dbSNP
rs537901791 2580 dbSNP
rs951670053 2594 dbSNP
rs1034019459 2613 dbSNP
rs979797745 2615 dbSNP
rs114002879 2617 dbSNP
rs780278883 2636 dbSNP
rs1335668409 2640 dbSNP
rs1383035119 2644 dbSNP
rs1326334652 2648 dbSNP
rs1052706463 2658 dbSNP
rs115383582 2659 dbSNP
rs925635208 2662 dbSNP
rs533887342 2664 dbSNP
rs200781438 2666 dbSNP
rs1362671451 2667 dbSNP
rs911390329 2669 dbSNP
rs1312364248 2670 dbSNP
rs986064381 2672 dbSNP
rs1377533349 2677 dbSNP
rs1240353351 2684 dbSNP
rs955634654 2685 dbSNP
rs1158919881 2689 dbSNP
rs1362534082 2690 dbSNP
rs1461335304 2691 dbSNP
rs955909673 2694 dbSNP
rs1173765434 2695 dbSNP
rs973000157 2697 dbSNP
rs566735974 2699 dbSNP
rs1000069425 2717 dbSNP
rs547910620 2720 dbSNP
rs180796582 2742 dbSNP
rs376310375 2744 dbSNP
rs376807321 2744 dbSNP
rs1256138615 2761 dbSNP
rs1391733066 2761 dbSNP
rs1306089475 2762 dbSNP
rs547276664 2765 dbSNP
rs903832101 2766 dbSNP
rs1235369055 2770 dbSNP
rs1263763935 2771 dbSNP
rs1486432906 2773 dbSNP
rs1005602488 2776 dbSNP
rs1201912146 2779 dbSNP
rs1201375837 2781 dbSNP
rs970587634 2783 dbSNP
rs1050380614 2784 dbSNP
rs1014532803 2785 dbSNP
rs568839542 2786 dbSNP
rs1200783099 2792 dbSNP
rs996174401 2797 dbSNP
rs1468832414 2800 dbSNP
rs1173691130 2804 dbSNP
rs1319241934 2808 dbSNP
rs1292706285 2812 dbSNP
rs1297354557 2840 dbSNP
rs1031521235 2843 dbSNP
rs550695669 2847 dbSNP
rs1040492411 2848 dbSNP
rs998736986 2855 dbSNP
rs940826580 2857 dbSNP
rs908053450 2861 dbSNP
rs1344875848 2862 dbSNP
rs1221729553 2863 dbSNP
rs1049303404 2864 dbSNP
rs930874534 2868 dbSNP
rs927569893 2870 dbSNP
rs532202770 2874 dbSNP
rs6122500 2875 dbSNP
rs1249906661 2876 dbSNP
rs1489677736 2881 dbSNP
rs971114292 2882 dbSNP
rs943124147 2889 dbSNP
rs888890134 2890 dbSNP
rs916955867 2899 dbSNP
rs934127761 2902 dbSNP
rs564709436 2904 dbSNP
rs956025894 2905 dbSNP
rs972947822 2909 dbSNP
rs1032851249 2911 dbSNP
rs552784814 2916 dbSNP
rs909883574 2917 dbSNP
rs528011388 2922 dbSNP
rs1257779236 2923 dbSNP
rs1364863763 2926 dbSNP
rs970156469 2933 dbSNP
rs560859052 2934 dbSNP
rs571039413 2944 dbSNP
rs1300067032 2949 dbSNP
rs530109458 2973 dbSNP
rs1362751598 2983 dbSNP
rs1214142157 2990 dbSNP
rs144722665 2993 dbSNP
rs901857368 3000 dbSNP
rs544342066 3009 dbSNP
rs1004971304 3010 dbSNP
rs886572736 3011 dbSNP
rs1466011584 3019 dbSNP
rs998725577 3020 dbSNP
rs1185501504 3024 dbSNP
rs1049256282 3026 dbSNP
rs1273157998 3036 dbSNP
rs1446130504 3040 dbSNP
rs140792569 3047 dbSNP
rs1384408687 3052 dbSNP
rs1422597634 3056 dbSNP
rs927516081 3065 dbSNP
rs1345773232 3066 dbSNP
rs188440929 3067 dbSNP
rs1021230691 3071 dbSNP
rs949725609 3075 dbSNP
rs1007658726 3077 dbSNP
rs540405559 3082 dbSNP
rs879588377 3084 dbSNP
rs1242847211 3089 dbSNP
rs1285574739 3090 dbSNP
rs767862039 3110 dbSNP
rs916923542 3112 dbSNP
rs888804321 3116 dbSNP
rs568216200 3119 dbSNP
rs1330604560 3125 dbSNP
rs1391808286 3128 dbSNP
rs373041321 3134 dbSNP
rs1393625473 3138 dbSNP
rs1323889286 3139 dbSNP
rs1462342418 3148 dbSNP
rs988930554 3151 dbSNP
rs1462955235 3154 dbSNP
rs1417881588 3155 dbSNP
rs955810895 3160 dbSNP
rs1160150231 3161 dbSNP
rs1468245778 3163 dbSNP
rs867678920 3164 dbSNP
rs933094804 3169 dbSNP
rs1365222080 3177 dbSNP
rs1156963906 3178 dbSNP
rs1408394789 3179 dbSNP
rs796782901 3180 dbSNP
rs1037243438 3188 dbSNP
rs147990693 3204 dbSNP
rs1028168171 3205 dbSNP
rs1252916073 3218 dbSNP
rs976716452 3219 dbSNP
rs1470230062 3229 dbSNP
rs1222590325 3232 dbSNP
rs1281437103 3233 dbSNP
rs73303961 3233 dbSNP
rs1203816799 3234 dbSNP
rs184902053 3235 dbSNP
rs1204673019 3247 dbSNP
rs568878136 3249 dbSNP
rs993282931 3250 dbSNP
rs1233275338 3254 dbSNP
rs1469506290 3255 dbSNP
rs1348784054 3261 dbSNP
rs1018954726 3266 dbSNP
rs1005331809 3270 dbSNP
rs1240602415 3273 dbSNP
rs1470343948 3273 dbSNP
rs1369891821 3274 dbSNP
rs1411885855 3277 dbSNP
rs1031457561 3279 dbSNP
rs1301002524 3279 dbSNP
rs1440572651 3280 dbSNP
rs571034216 3284 dbSNP
rs886506457 3288 dbSNP
rs1346766328 3303 dbSNP
rs1223556690 3316 dbSNP
rs1282119125 3317 dbSNP
rs1442952787 3318 dbSNP
rs556985224 3320 dbSNP
rs538767894 3325 dbSNP
rs76271729 3331 dbSNP
rs1044626688 3337 dbSNP
rs1386661517 3338 dbSNP
rs950335281 3353 dbSNP
rs896088299 3359 dbSNP
rs1198721629 3368 dbSNP
rs1427323976 3373 dbSNP
rs1021472493 3379 dbSNP
rs1158853886 3380 dbSNP
rs1419147785 3382 dbSNP
rs1408568727 3384 dbSNP
rs1052787221 3391 dbSNP
rs934347788 3392 dbSNP
rs1404918369 3398 dbSNP
rs1301920566 3408 dbSNP
rs1007486634 3415 dbSNP
rs1229057400 3416 dbSNP
rs1270409618 3417 dbSNP
rs1192171777 3418 dbSNP
rs953129511 3422 dbSNP
rs1225875324 3424 dbSNP
rs1293697364 3425 dbSNP
rs925693506 3433 dbSNP
rs1030002084 3434 dbSNP
rs1221656136 3441 dbSNP
rs997674993 3444 dbSNP
rs372733536 3455 dbSNP
rs1004361476 3458 dbSNP
rs932464785 3459 dbSNP
rs1372687948 3461 dbSNP
rs1474576592 3463 dbSNP
rs35147024 3464 dbSNP
rs921100009 3467 dbSNP
rs1165820683 3472 dbSNP
rs1004407666 3475 dbSNP
rs1424520401 3479 dbSNP
rs888636722 3482 dbSNP
rs1201977836 3496 dbSNP
rs1387861996 3501 dbSNP
rs1445418305 3505 dbSNP
rs1318468448 3506 dbSNP
rs10719363 3507 dbSNP
rs1185673696 3507 dbSNP
rs1244038341 3507 dbSNP
rs1245043042 3507 dbSNP
rs1263604996 3507 dbSNP
rs1325440915 3507 dbSNP
rs1359900673 3507 dbSNP
rs1432483973 3507 dbSNP
rs398035808 3507 dbSNP
rs569409766 3507 dbSNP
rs796768678 3507 dbSNP
rs1444398972 3508 dbSNP
rs1182178729 3509 dbSNP
rs1049093716 3510 dbSNP
rs919594923 3514 dbSNP
rs868775093 3516 dbSNP
rs1158596031 3521 dbSNP
rs1383622207 3525 dbSNP
rs1455261290 3527 dbSNP
rs949000253 3528 dbSNP
rs1383157411 3534 dbSNP
rs546346406 3540 dbSNP
rs1277872119 3542 dbSNP
rs965316584 3545 dbSNP
rs1327148045 3546 dbSNP
rs1205725427 3547 dbSNP
rs1263959364 3548 dbSNP
rs1015950017 3549 dbSNP
rs1236268559 3553 dbSNP
rs1199045256 3554 dbSNP
rs1368182227 3564 dbSNP
rs1250525753 3565 dbSNP
rs983458160 3566 dbSNP
rs1362620769 3574 dbSNP
rs1471319256 3583 dbSNP
rs552754421 3584 dbSNP
rs1406328060 3586 dbSNP
rs950708239 3587 dbSNP
rs1057167130 3591 dbSNP
rs1300822833 3598 dbSNP
rs1398384795 3600 dbSNP
rs1269580447 3609 dbSNP
rs1027715804 3617 dbSNP
rs1348600284 3622 dbSNP
rs1225408647 3626 dbSNP
rs527910187 3632 dbSNP
rs182132997 3639 dbSNP
rs1208283585 3640 dbSNP
rs924719331 3641 dbSNP
rs1298288843 3642 dbSNP
rs1433659758 3643 dbSNP
rs143806694 3648 dbSNP
rs1023128834 3649 dbSNP
rs1490997637 3654 dbSNP
rs1200896310 3657 dbSNP
rs1432180042 3658 dbSNP
rs1173504054 3663 dbSNP
rs1179585554 3664 dbSNP
rs1014879008 3668 dbSNP
rs896052875 3678 dbSNP
rs1462277401 3679 dbSNP
rs1297445059 3687 dbSNP
rs1368583015 3698 dbSNP
rs117546933 3714 dbSNP
rs1426478771 3717 dbSNP
rs934316819 3718 dbSNP
rs904217107 3724 dbSNP
rs148999993 3731 dbSNP
rs932410948 3735 dbSNP
rs1227124358 3742 dbSNP
rs145870665 3744 dbSNP
rs953363467 3745 dbSNP
rs1485448355 3747 dbSNP
rs976593964 3749 dbSNP
rs1030405185 3750 dbSNP
rs1487872076 3752 dbSNP
rs1188992966 3760 dbSNP
rs1263382190 3760 dbSNP
rs532503654 3774 dbSNP
rs565053223 3790 dbSNP
rs961772279 3791 dbSNP
rs1212734023 3793 dbSNP
rs540339752 3796 dbSNP
rs1426403687 3797 dbSNP
rs1164114925 3798 dbSNP
rs908425189 3802 dbSNP
rs983122426 3803 dbSNP
rs1290758667 3804 dbSNP
rs375290993 3809 dbSNP
rs1212674797 3810 dbSNP
rs554424842 3813 dbSNP
rs1247259516 3819 dbSNP
rs1005988844 3821 dbSNP
rs973432782 3826 dbSNP
rs1218683465 3830 dbSNP
rs1048594425 3838 dbSNP
rs1353167483 3853 dbSNP
rs970125948 3855 dbSNP
rs1187558389 3857 dbSNP
rs1245871720 3865 dbSNP
rs1023497006 3871 dbSNP
rs1448308427 3876 dbSNP
rs542946676 3878 dbSNP
rs1014414073 3883 dbSNP
rs960497892 3886 dbSNP
rs575606059 3891 dbSNP
rs999066090 3892 dbSNP
rs1426461880 3897 dbSNP
rs1171442705 3899 dbSNP
rs904164801 3906 dbSNP
rs1474952286 3912 dbSNP
rs1042696504 3916 dbSNP
rs996508553 3923 dbSNP
rs1041747244 3928 dbSNP
rs568963144 3929 dbSNP
rs1041206301 3930 dbSNP
rs1377574052 3931 dbSNP
rs947478499 3945 dbSNP
rs1308450488 3952 dbSNP
rs1202219028 3953 dbSNP
rs943860992 3956 dbSNP
rs1265813849 3959 dbSNP
rs1462412415 3960 dbSNP
rs550628146 3967 dbSNP
rs1046939473 3973 dbSNP
rs1471731628 3976 dbSNP
rs931208852 3977 dbSNP
rs1408715815 3978 dbSNP
rs1472288280 3979 dbSNP
rs986018125 3981 dbSNP
rs1258700108 3988 dbSNP
rs1232146050 3995 dbSNP
rs931880501 4008 dbSNP
rs1333847648 4009 dbSNP
rs865851365 4010 dbSNP
rs1331940798 4011 dbSNP
rs1444892431 4011 dbSNP
rs976015176 4012 dbSNP
rs1228492597 4025 dbSNP
rs1350452649 4026 dbSNP
rs1227217842 4029 dbSNP
rs557032296 4030 dbSNP
rs562434506 4032 dbSNP
rs919877650 4035 dbSNP
rs961678056 4046 dbSNP
rs973381890 4047 dbSNP
rs35967376 4051 dbSNP
rs1440468733 4062 dbSNP
rs1206413006 4063 dbSNP
rs1233364477 4068 dbSNP
rs1440523277 4071 dbSNP
rs1482702006 4074 dbSNP
rs1180057980 4075 dbSNP
rs1431551662 4080 dbSNP
rs1403065252 4086 dbSNP
rs1014607445 4088 dbSNP
rs528920503 4089 dbSNP
rs915970308 4093 dbSNP
rs951861449 4099 dbSNP
rs561493236 4100 dbSNP
rs960197012 4101 dbSNP
rs1027553032 4103 dbSNP
rs538657080 4118 dbSNP
rs1032265851 4124 dbSNP
rs1370429700 4127 dbSNP
rs1408567429 4128 dbSNP
rs999013566 4129 dbSNP
rs372229431 4136 dbSNP
rs1021861465 4140 dbSNP
rs764692240 4141 dbSNP
rs1003085664 4154 dbSNP
rs190077610 4155 dbSNP
rs1202955247 4159 dbSNP
rs1041741026 4167 dbSNP
rs144770106 4172 dbSNP
rs199652868 4174 dbSNP
rs1198294573 4177 dbSNP
rs34271499 4177 dbSNP
rs398035807 4177 dbSNP
rs398081363 4177 dbSNP
rs1050668209 4195 dbSNP
rs534381126 4201 dbSNP
rs1040760062 4203 dbSNP
rs1315943655 4207 dbSNP
rs1428315807 4208 dbSNP
rs1166004619 4216 dbSNP
rs1008399347 4217 dbSNP
rs567096605 4226 dbSNP
rs1322331724 4227 dbSNP
rs975964261 4235 dbSNP
rs1432467558 4248 dbSNP
rs1304488193 4252 dbSNP
rs1297991556 4262 dbSNP
rs1364181786 4266 dbSNP
rs776232032 4268 dbSNP
rs1225992353 4270 dbSNP
rs1222415451 4278 dbSNP
rs1357019909 4280 dbSNP
rs1209261973 4281 dbSNP
rs1287848564 4283 dbSNP
rs1448887962 4284 dbSNP
rs1379486401 4285 dbSNP
rs117236540 4293 dbSNP
rs1448040342 4294 dbSNP
rs550827038 4300 dbSNP
rs931156717 4302 dbSNP
rs907529589 4304 dbSNP
rs569189701 4305 dbSNP
rs1457871494 4307 dbSNP
rs984484007 4311 dbSNP
rs1387969658 4316 dbSNP
rs550824988 4319 dbSNP
rs951868267 4333 dbSNP
rs6017787 4337 dbSNP
rs3209084 4341 dbSNP
rs114265592 4343 dbSNP
rs1035821851 4347 dbSNP
rs948678421 4355 dbSNP
rs1282441290 4356 dbSNP
rs1421769611 4357 dbSNP
rs773199319 4358 dbSNP
rs1267708141 4362 dbSNP
rs915901935 4364 dbSNP
rs992893994 4365 dbSNP
rs547080515 4373 dbSNP
rs903481709 4377 dbSNP
rs1192813842 4379 dbSNP
rs1452469648 4380 dbSNP
rs924758924 4382 dbSNP
rs1470863489 4395 dbSNP
rs1159327871 4411 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545215. RNA binding protein: AGO4. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545215
Method / RBP PAR-CLIP / AGO4
Cell line / Condition HEK293 / Control
Location of target site ENST00000372227.1 | 3UTR | GCUCCCUCUCCUCCCCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
236 hsa-miR-4667-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT256051 UBE2K ubiquitin conjugating enzyme E2 K 2 4
MIRT306046 SKIL SKI like proto-oncogene 2 10
MIRT348290 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT380488 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 2 2
MIRT441955 MAGEB10 MAGE family member B10 2 6
MIRT447735 MOCOS molybdenum cofactor sulfurase 2 2
MIRT449260 PALM2 paralemmin 2 2 4
MIRT456108 VAV3 vav guanine nucleotide exchange factor 3 2 8
MIRT471140 PHF19 PHD finger protein 19 2 4
MIRT486256 BCORL1 BCL6 corepressor like 1 2 2
MIRT489562 PLD6 phospholipase D family member 6 2 2
MIRT489898 PPIC peptidylprolyl isomerase C 2 4
MIRT497434 SEC63 SEC63 homolog, protein translocation regulator 2 4
MIRT499611 DNAJA1 DnaJ heat shock protein family (Hsp40) member A1 2 8
MIRT506401 NSD1 nuclear receptor binding SET domain protein 1 2 8
MIRT513021 NSFL1C NSFL1 cofactor 2 6
MIRT513044 BRIX1 BRX1, biogenesis of ribosomes 2 2
MIRT526173 ANKRD65 ankyrin repeat domain 65 2 2
MIRT527820 TMEM74B transmembrane protein 74B 2 2
MIRT528177 C6orf47 chromosome 6 open reading frame 47 2 2
MIRT530306 TNFRSF10D TNF receptor superfamily member 10d 2 2
MIRT531943 AACS acetoacetyl-CoA synthetase 2 2
MIRT531987 SLCO1B3 solute carrier organic anion transporter family member 1B3 2 2
MIRT534821 RAB30 RAB30, member RAS oncogene family 2 2
MIRT536153 MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 2 2
MIRT540297 TMA16 translation machinery associated 16 homolog 2 2
MIRT543485 RXRA retinoid X receptor alpha 2 2
MIRT547506 MAZ MYC associated zinc finger protein 2 2
MIRT569289 SLC35C2 solute carrier family 35 member C2 2 2
MIRT572754 FAM204A family with sequence similarity 204 member A 2 2
MIRT575266 Timp3 tissue inhibitor of metalloproteinase 3 2 2
MIRT609477 LSAMP limbic system-associated membrane protein 2 2
MIRT610265 LRRC47 leucine rich repeat containing 47 2 2
MIRT610350 AGTRAP angiotensin II receptor associated protein 2 2
MIRT610396 FOXE1 forkhead box E1 2 2
MIRT610492 GPC4 glypican 4 2 4
MIRT612511 SH3PXD2A SH3 and PX domains 2A 2 2
MIRT612760 MYOCD myocardin 2 2
MIRT613414 CDH8 cadherin 8 2 2
MIRT613703 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT613814 ATP6AP1L ATPase H+ transporting accessory protein 1 like 2 2
MIRT614170 MYO1F myosin IF 2 2
MIRT614214 LENG9 leukocyte receptor cluster member 9 2 2
MIRT614225 TSKU tsukushi, small leucine rich proteoglycan 2 2
MIRT614497 RHOB ras homolog family member B 2 2
MIRT614986 GIPC1 GIPC PDZ domain containing family member 1 2 2
MIRT615222 ARSE arylsulfatase E (chondrodysplasia punctata 1) 2 2
MIRT615326 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT615494 SHB SH2 domain containing adaptor protein B 2 2
MIRT615506 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 2
MIRT615536 PHF1 PHD finger protein 1 2 2
MIRT615550 TNFSF15 TNF superfamily member 15 2 2
MIRT615954 SORD sorbitol dehydrogenase 2 2
MIRT616478 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT616667 ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 2 2
MIRT616742 DCTN5 dynactin subunit 5 2 2
MIRT616760 SVOP SV2 related protein 2 2
MIRT616913 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT617645 RAB43 RAB43, member RAS oncogene family 2 2
MIRT617822 EMX2 empty spiracles homeobox 2 2 2
MIRT618468 GPR55 G protein-coupled receptor 55 2 2
MIRT618517 SELPLG selectin P ligand 2 2
MIRT618687 DVL1 dishevelled segment polarity protein 1 2 2
MIRT619464 XRCC2 X-ray repair cross complementing 2 2 2
MIRT619560 GABRG2 gamma-aminobutyric acid type A receptor gamma2 subunit 2 2
MIRT620004 C1orf64 steroid receptor associated and regulated protein 2 2
MIRT620210 VN1R1 vomeronasal 1 receptor 1 2 2
MIRT620446 SEMA3E semaphorin 3E 2 2
MIRT621297 SLC35B1 solute carrier family 35 member B1 2 2
MIRT621765 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT621812 TMEM170B transmembrane protein 170B 2 2
MIRT622171 SMYD1 SET and MYND domain containing 1 2 2
MIRT622202 SLC5A12 solute carrier family 5 member 12 2 2
MIRT622295 SH3BP5L SH3 binding domain protein 5 like 2 2
MIRT622718 PLEKHA2 pleckstrin homology domain containing A2 2 2
MIRT622893 PDCL phosducin like 2 2
MIRT623215 MTFR1L mitochondrial fission regulator 1 like 2 2
MIRT623230 MON1B MON1 homolog B, secretory trafficking associated 2 2
MIRT623548 KCNJ6 potassium voltage-gated channel subfamily J member 6 2 2
MIRT623557 JPH3 junctophilin 3 2 2
MIRT623669 HRK harakiri, BCL2 interacting protein 2 2
MIRT623730 GTDC1 glycosyltransferase like domain containing 1 2 4
MIRT623742 GRIN2B glutamate ionotropic receptor NMDA type subunit 2B 2 2
MIRT623906 FOXK2 forkhead box K2 2 2
MIRT624181 DERL2 derlin 2 2 2
MIRT625758 GPC5 glypican 5 2 2
MIRT625975 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT626300 KCNK12 potassium two pore domain channel subfamily K member 12 2 2
MIRT626779 PI4K2B phosphatidylinositol 4-kinase type 2 beta 2 2
MIRT627034 TMEM109 transmembrane protein 109 2 4
MIRT627109 PDRG1 p53 and DNA damage regulated 1 2 2
MIRT627405 TMEM170A transmembrane protein 170A 2 2
MIRT628390 CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 2 2
MIRT628428 ARRB1 arrestin beta 1 2 2
MIRT629824 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT630870 UBXN11 UBX domain protein 11 2 2
MIRT630968 KIAA2022 neurite extension and migration factor 2 2
MIRT631588 ITGAL integrin subunit alpha L 2 2
MIRT633209 WFDC6 WAP four-disulfide core domain 6 2 2
MIRT635310 FAM179A TOG array regulator of axonemal microtubules 2 2 2
MIRT637062 PRKAG1 protein kinase AMP-activated non-catalytic subunit gamma 1 2 2
MIRT637116 KLHL21 kelch like family member 21 2 2
MIRT637635 ZNF431 zinc finger protein 431 2 2
MIRT638390 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT639178 CEP70 centrosomal protein 70 2 2
MIRT639777 GPR45 G protein-coupled receptor 45 2 2
MIRT639885 STC1 stanniocalcin 1 2 2
MIRT640003 PHF21B PHD finger protein 21B 2 2
MIRT640640 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT640824 GPR107 G protein-coupled receptor 107 2 2
MIRT641253 CENPN centromere protein N 2 2
MIRT641434 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT641746 MACROD2 MACRO domain containing 2 2 2
MIRT641869 STOML1 stomatin like 1 2 2
MIRT641890 SND1 staphylococcal nuclease and tudor domain containing 1 2 2
MIRT642356 C19orf40 Fanconi anemia core complex associated protein 24 1 1
MIRT644007 PPP1R3G protein phosphatase 1 regulatory subunit 3G 2 2
MIRT644301 ZSCAN29 zinc finger and SCAN domain containing 29 2 2
MIRT645706 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT645752 FAM213A family with sequence similarity 213 member A 2 2
MIRT646123 SLC26A9 solute carrier family 26 member 9 2 2
MIRT646397 SLC22A6 solute carrier family 22 member 6 2 2
MIRT646490 APBB3 amyloid beta precursor protein binding family B member 3 2 2
MIRT646576 XPNPEP3 X-prolyl aminopeptidase 3 2 2
MIRT647151 CYP27C1 cytochrome P450 family 27 subfamily C member 1 2 2
MIRT647554 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT647761 RNF168 ring finger protein 168 2 2
MIRT648078 ZMIZ2 zinc finger MIZ-type containing 2 2 2
MIRT648644 ZNF562 zinc finger protein 562 2 2
MIRT648967 TMEM45B transmembrane protein 45B 2 2
MIRT649126 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT649556 FAM20B FAM20B, glycosaminoglycan xylosylkinase 2 2
MIRT649644 SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 2 2
MIRT649781 MRPS27 mitochondrial ribosomal protein S27 2 4
MIRT649945 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT649975 TRAFD1 TRAF-type zinc finger domain containing 1 2 2
MIRT650250 CD68 CD68 molecule 2 2
MIRT650717 KRT32 keratin 32 2 2
MIRT650979 ZNF831 zinc finger protein 831 2 2
MIRT651049 ZNF644 zinc finger protein 644 2 2
MIRT651120 ZNF48 zinc finger protein 48 2 2
MIRT651221 ZNF225 zinc finger protein 225 2 2
MIRT651277 ZDHHC5 zinc finger DHHC-type containing 5 2 2
MIRT651401 ZBTB16 zinc finger and BTB domain containing 16 2 2
MIRT651410 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT652198 TRIM39 tripartite motif containing 39 2 2
MIRT652710 THBS2 thrombospondin 2 2 4
MIRT652763 TENM4 teneurin transmembrane protein 4 2 2
MIRT653031 STX1B syntaxin 1B 2 2
MIRT653099 SRSF7 serine and arginine rich splicing factor 7 2 2
MIRT653354 SMG7 SMG7, nonsense mediated mRNA decay factor 2 2
MIRT653366 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT653755 SLC12A5 solute carrier family 12 member 5 2 2
MIRT653864 SHANK2 SH3 and multiple ankyrin repeat domains 2 2 2
MIRT653961 SEPN1 selenoprotein N 2 2
MIRT654463 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT654483 RANBP2 RAN binding protein 2 2 2
MIRT654696 PSMB5 proteasome subunit beta 5 2 2
MIRT655075 PIP4K2B phosphatidylinositol-5-phosphate 4-kinase type 2 beta 2 2
MIRT655443 PALM2-AKAP2 PALM2-AKAP2 readthrough 2 2
MIRT655606 ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 2 2
MIRT656026 MYO5A myosin VA 2 4
MIRT656038 MYO10 myosin X 2 2
MIRT656304 METTL1 methyltransferase like 1 2 2
MIRT656372 MDFI MyoD family inhibitor 2 4
MIRT656399 MCU mitochondrial calcium uniporter 2 2
MIRT656415 MCTP1 multiple C2 and transmembrane domain containing 1 2 2
MIRT656762 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT656905 KIAA1958 KIAA1958 2 2
MIRT658938 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT659221 CXXC5 CXXC finger protein 5 2 2
MIRT659281 CTIF cap binding complex dependent translation initiation factor 2 2
MIRT659483 CLDN1 claudin 1 2 2
MIRT660112 BTBD3 BTB domain containing 3 2 2
MIRT660305 BHLHE40 basic helix-loop-helix family member e40 2 2
MIRT660334 BCL11B B-cell CLL/lymphoma 11B 2 2
MIRT660788 AKAP2 A-kinase anchoring protein 2 2 2
MIRT661578 EPHX2 epoxide hydrolase 2 2 2
MIRT661744 DTHD1 death domain containing 1 2 2
MIRT661873 PDLIM5 PDZ and LIM domain 5 2 2
MIRT662256 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT662698 SPIRE2 spire type actin nucleation factor 2 2 2
MIRT662761 LRRC3C leucine rich repeat containing 3C 2 2
MIRT663315 TECPR2 tectonin beta-propeller repeat containing 2 2 2
MIRT664687 EIF2B2 eukaryotic translation initiation factor 2B subunit beta 2 4
MIRT665966 SZRD1 SUZ RNA binding domain containing 1 2 2
MIRT666057 STK40 serine/threonine kinase 40 2 2
MIRT666875 POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) 2 2
MIRT667214 NIPAL1 NIPA like domain containing 1 2 2
MIRT667285 NAV1 neuron navigator 1 2 2
MIRT667648 LGALSL galectin like 2 2
MIRT668045 GTPBP10 GTP binding protein 10 2 2
MIRT668155 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT668492 ETV3 ETS variant 3 2 2
MIRT669356 BHLHE22 basic helix-loop-helix family member e22 2 2
MIRT676486 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT684285 CDK9 cyclin dependent kinase 9 2 2
MIRT686689 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT691270 GET4 golgi to ER traffic protein 4 2 2
MIRT698669 TEF TEF, PAR bZIP transcription factor 2 2
MIRT699893 RUNX1 runt related transcription factor 1 2 2
MIRT702635 ITGA5 integrin subunit alpha 5 2 2
MIRT708797 KIFC3 kinesin family member C3 2 2
MIRT710950 AMZ1 archaelysin family metallopeptidase 1 2 2
MIRT711228 RETSAT retinol saturase 2 2
MIRT711637 PEBP1 phosphatidylethanolamine binding protein 1 2 2
MIRT711968 APOA5 apolipoprotein A5 2 2
MIRT712078 WDR37 WD repeat domain 37 2 2
MIRT712542 CYB561D1 cytochrome b561 family member D1 2 2
MIRT713595 ANKMY1 ankyrin repeat and MYND domain containing 1 2 2
MIRT713715 PAOX polyamine oxidase 2 2
MIRT714482 TBL2 transducin beta like 2 2 2
MIRT715510 MAPKBP1 mitogen-activated protein kinase binding protein 1 2 2
MIRT715833 SZT2 SZT2, KICSTOR complex subunit 2 2
MIRT715931 CHD4 chromodomain helicase DNA binding protein 4 2 2
MIRT716183 MTRNR2L1 MT-RNR2-like 1 2 2
MIRT716330 POU5F1 POU class 5 homeobox 1 2 2
MIRT716942 CACNB1 calcium voltage-gated channel auxiliary subunit beta 1 2 2
MIRT717337 URM1 ubiquitin related modifier 1 2 2
MIRT718114 CRTC1 CREB regulated transcription coactivator 1 2 2
MIRT718866 LRSAM1 leucine rich repeat and sterile alpha motif containing 1 2 2
MIRT719456 APBA1 amyloid beta precursor protein binding family A member 1 2 2
MIRT719989 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT720262 FAM83F family with sequence similarity 83 member F 2 2
MIRT721361 ENTHD1 ENTH domain containing 1 2 2
MIRT721370 SEC14L6 SEC14 like lipid binding 6 2 2
MIRT721489 LTB4R2 leukotriene B4 receptor 2 2 2
MIRT723010 FADS1 fatty acid desaturase 1 2 2
MIRT723608 FKRP fukutin related protein 2 2
MIRT723686 CIRH1A UTP4, small subunit processome component 2 2
MIRT723972 GPR146 G protein-coupled receptor 146 2 2
MIRT724826 HOXB8 homeobox B8 2 2
MIRT725283 OSTM1 osteopetrosis associated transmembrane protein 1 2 2
MIRT725437 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT725606 CAPN6 calpain 6 2 2
MIRT731686 BTK Bruton tyrosine kinase 3 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4667 Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-mir-4667 Androstenedione 6128 NSC9563 resistant cell line (MCF-7)
hsa-mir-4667 Tamoxifen 2733525 NSC180973 approved resistant cell line (MCF7)
hsa-miR-4667-3p Tripterygium wilfordii Hook F sensitive tissue
hsa-miR-4667-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4667-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CP20)
hsa-miR-4667-3p Platinum 23939 sensitive tissue (non-small cell lung cancer)
hsa-miR-4667-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-4667-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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