pre-miRNA Information
pre-miRNA hsa-mir-3911   
Genomic Coordinates chr9: 127690687 - 127690795
Description Homo sapiens miR-3911 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3911
Sequence 12| UGUGUGGAUCCUGGAGGAGGCA |33
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
431152 7 ClinVar
COSM3847691 15 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs943029638 2 dbSNP
rs780635543 3 dbSNP
rs371437556 6 dbSNP
rs1135401819 7 dbSNP
rs748706130 14 dbSNP
rs1403241180 15 dbSNP
rs779344153 17 dbSNP
rs755366929 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol DCAF8   
Synonyms GAN2, H326, WDR42A
Description DDB1 and CUL4 associated factor 8
Transcript NM_015726   
Expression
Putative miRNA Targets on DCAF8
3'UTR of DCAF8
(miRNA target sites are highlighted)
>DCAF8|NM_015726|3'UTR
   1 GGCCTCATACCTAGGTGGGGCAGGCTGGGGCTGCCAACCTGATCCTGCCTGGGCAACCCTTTCCTGTCCCAGGCCCTACA
  81 TTCAGCAGAAACGCACTTTGGACTTTTTGCTTTAGATAAAAGAAAGACATCCCAGGAGAAGGACAAACCAGAGGAGTGAA
 161 CCAACAAAGAGTACCTAGGAATGGGAGTTGAGCCCTGGAATGGGGCTCCATGGAGAGGTGCATAGGACTCGGCAGAAATG
 241 GCCTCTCCCCAAAGCCTCTTTTTGAGAGGAGAGGGAAGCCTATTTTGTTAACTGGTTTGGGATAGGGAATGGGGTTTCTT
 321 TTTCTTTAATCTCCCTTGTTTCTTGGGCTGGGGGAGGGGTGGGGGGAACAACTGGCTATTCAGTACCAAGGGGCCAGAGT
 401 GGAGGGTAGGAGTGCCACTCTCTCTTTGGTTTAGGTTTTTGACCTTTTCTTCCTTTGTTTTTTAAAAGTTTATGACAGTT
 481 GGCTCCCCCCCCACCCCCAGCAACCCCATCCCAGAATCCTATTTTCCTGGGAAGTCCTTAAAGCCCCTAACCATCCCACA
 561 CTCTTCACTTTCCTTTCCACCTTATTCATTCTCTGTACTTACCACAGTATTTTGCACTTGATTACATATCCTTCACTCTC
 641 TTCTCTTCATCCCATCACCCCCTAAATAGGTCAGGTGAGGGAGGCTGGGAAGAGGTGGGAGGAGGGGCAGAAGTGAAGGA
 721 AGAATAGGAAGGATATTACCTCTTCTGTTATTTTTTTAAGAAACATTGTTTGGTGGCAGCAATCTCCCTGTCCCTATCAC
 801 TGTTAGAGGCCTAATTTTATATCTATAAATATATTAAAAAGCAAGTCAAACTTGGATGTATCAAGGTAAAATTATTGTCA
 881 AAGTTTAAATACCTATATATTCTCTGAATGCAATAAAGGGACTTAAGAGTGAACAAGAGTAATGGTGTGGAAGTGACACC
 961 TGGGGTCAGTTTACCTCTGTGTATGGTCACTAGAGATTGGGACTTACCCTTTAGGTTTTAGGAGGCTTGAGAATGGAAGG
1041 ATCCTCATTTCTGCCCTTCCTGGTTCCCTGCTTTGGTGTAGGGGTTGGGAAAAACAGGAAATTCCTCTCAGCTCTGCCTC
1121 AGATCTCCTACCTCTCCTTAAGTCTTGTAGGGGGTTCCAAGGATGGCTCTTCTAACCAGAGGCTGGCCTGTCTTTAAAAC
1201 TTAACTACTTTAGGGTGGTGCCACCACTGCAGACTATTGTGGTACTTTGTGACAGAAGACATGTACACACACACCACACA
1281 CATACATACACACTCTCTCACTCTGTCTCTCTTACCTTTAGCTGCTTGATCATTAAGCCATCCAACTTCATGCCAGTTCC
1361 CTTCTTTATAGAAGAGTGAAGGGAAAGACTTCCTGGGTTTGACTTAAACCTTGTCCACCTCTTGATATTTTAGGATTGAG
1441 GAATAAGTCATTAATCTAAGGACTGATTACAGTGGCTGGAGCTTGGGCACTTGTCTTATCACTGGTCACTGAGTCTGAAA
1521 GTCCCAGCTGAATTCTTGCCCTTAAGTGCTTTTGCTGCTATTTTTTTGCCCCCAGTTCCACAAGATCCAACCAAGAATTC
1601 TGTATCCTGGGACAGTCAGATTCTTCTAAATCAGGCCAGGAAGGAGGGGAAAAGAGTGAGAGAATGGTATTCCCAGATAC
1681 TTCTTCCTCCTGCCCCTTTTCCCAGCAGCTCTGAGACCAGATGTTGGCTGCTGTACTTACTCCCTGAGGTAGGGAATGTG
1761 TGGTGATCGAGTGGTCTGTGTTCCTATTGCTGGTGGGGTGATAGGGTGGGCTAAAAACCATGCACTCTGGAATTTGTTGT
1841 ATTTTCTCCCAGTAAAGCTTTTCTTCTCCCGACTGCTAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acggaGGAGGUCCUAGGUGUgu 5'
               || ||| | ||||||  
Target 5' ttttgCCCCCA-GTTCCACAag 3'
1564 - 1584 136.00 -17.40
2
miRNA  3' acggaggagguccuaGGUGUGu 5'
                         |||||| 
Target 5' aagcccctaaccatcCCACACt 3'
541 - 562 120.00 -18.00
3
miRNA  3' acggaggagguccuaGGUGUGu 5'
                         |||||| 
Target 5' acatgtacacacacaCCACACa 3'
1259 - 1280 120.00 -13.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31532750 7 COSMIC
COSN30497071 36 COSMIC
COSN30156881 63 COSMIC
COSN31541714 83 COSMIC
COSN31554408 92 COSMIC
COSN30508995 122 COSMIC
COSN30574726 124 COSMIC
COSN15664004 125 COSMIC
COSN26561313 165 COSMIC
COSN1090800 256 COSMIC
COSN26582597 324 COSMIC
COSN26602730 360 COSMIC
COSN31603343 360 COSMIC
COSN8320965 445 COSMIC
COSN31518436 484 COSMIC
COSN5732708 574 COSMIC
COSN25059494 596 COSMIC
COSN31529588 656 COSMIC
COSN14836408 660 COSMIC
COSN31556528 738 COSMIC
COSN15855687 806 COSMIC
COSN31516872 902 COSMIC
COSN28655860 906 COSMIC
COSN29499904 1218 COSMIC
COSN16016790 1364 COSMIC
COSN22852798 1740 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1480588596 8 dbSNP
rs765709447 9 dbSNP
rs1212658481 17 dbSNP
rs762224451 20 dbSNP
rs942028772 22 dbSNP
rs947303685 27 dbSNP
rs1355262109 30 dbSNP
rs1262944195 34 dbSNP
rs1221236475 35 dbSNP
rs527477659 37 dbSNP
rs1288418980 43 dbSNP
rs1390387089 45 dbSNP
rs1371055848 46 dbSNP
rs1304463873 47 dbSNP
rs146479814 49 dbSNP
rs200437421 53 dbSNP
rs202082974 58 dbSNP
rs76573195 59 dbSNP
rs990958493 65 dbSNP
rs959547699 73 dbSNP
rs562499051 79 dbSNP
rs919408525 83 dbSNP
rs1239170221 92 dbSNP
rs1000384153 93 dbSNP
rs544199303 100 dbSNP
rs1423231891 101 dbSNP
rs1478256482 102 dbSNP
rs1485253023 114 dbSNP
rs1286276193 116 dbSNP
rs904183315 122 dbSNP
rs1020329725 137 dbSNP
rs972738415 143 dbSNP
rs554488481 148 dbSNP
rs1465548036 156 dbSNP
rs963689650 166 dbSNP
rs1009910567 168 dbSNP
rs890341961 169 dbSNP
rs1380921237 182 dbSNP
rs1350833976 196 dbSNP
rs1305608823 202 dbSNP
rs372951414 205 dbSNP
rs1228426347 208 dbSNP
rs11265357 209 dbSNP
rs931797343 214 dbSNP
rs1279618804 215 dbSNP
rs776684358 216 dbSNP
rs986171075 222 dbSNP
rs953351708 228 dbSNP
rs558610537 230 dbSNP
rs566175266 231 dbSNP
rs1037782025 245 dbSNP
rs1196118826 248 dbSNP
rs1427386415 251 dbSNP
rs942148405 255 dbSNP
rs997573118 261 dbSNP
rs1298999818 265 dbSNP
rs907955789 266 dbSNP
rs1452235866 272 dbSNP
rs181396500 282 dbSNP
rs1361571259 287 dbSNP
rs189402705 293 dbSNP
rs1158431405 300 dbSNP
rs1365000951 301 dbSNP
rs568768130 302 dbSNP
rs903036371 314 dbSNP
rs1180111168 325 dbSNP
rs1474738598 339 dbSNP
rs551953515 347 dbSNP
rs1263694162 351 dbSNP
rs949380470 354 dbSNP
rs1285131646 355 dbSNP
rs771013024 357 dbSNP
rs1218461812 359 dbSNP
rs1488500124 359 dbSNP
rs1195603313 363 dbSNP
rs1488263272 367 dbSNP
rs536503403 369 dbSNP
rs763350122 377 dbSNP
rs184178316 378 dbSNP
rs1417924361 408 dbSNP
rs1158581941 409 dbSNP
rs893092582 413 dbSNP
rs959516636 419 dbSNP
rs1421935477 420 dbSNP
rs1032548994 422 dbSNP
rs1347807209 424 dbSNP
rs1435291005 426 dbSNP
rs1323059679 437 dbSNP
rs1055628998 456 dbSNP
rs1369102716 457 dbSNP
rs1292640412 461 dbSNP
rs937014346 465 dbSNP
rs1354283920 475 dbSNP
rs979624694 476 dbSNP
rs906836513 478 dbSNP
rs74125506 483 dbSNP
rs537828874 486 dbSNP
rs1010293279 488 dbSNP
rs11265356 489 dbSNP
rs549502921 490 dbSNP
rs373432093 491 dbSNP
rs748398683 492 dbSNP
rs1330058823 493 dbSNP
rs377530193 493 dbSNP
rs571161821 493 dbSNP
rs953362916 493 dbSNP
rs1377622809 499 dbSNP
rs1448893067 505 dbSNP
rs1437269685 510 dbSNP
rs1282279992 515 dbSNP
rs1351724660 521 dbSNP
rs1162672878 524 dbSNP
rs900341534 531 dbSNP
rs779045417 537 dbSNP
rs1292321650 543 dbSNP
rs1037899827 545 dbSNP
rs1006062637 553 dbSNP
rs1316258696 561 dbSNP
rs1424286254 562 dbSNP
rs1172467874 564 dbSNP
rs755349841 572 dbSNP
rs1208639956 576 dbSNP
rs527400720 579 dbSNP
rs16831619 581 dbSNP
rs1047827307 584 dbSNP
rs1183920850 595 dbSNP
rs949348019 606 dbSNP
rs16831617 609 dbSNP
rs1055378771 630 dbSNP
rs754225028 631 dbSNP
rs967518683 633 dbSNP
rs925564088 636 dbSNP
rs1466671938 649 dbSNP
rs1404991446 656 dbSNP
rs180997028 657 dbSNP
rs966919946 658 dbSNP
rs1448530808 659 dbSNP
rs912953032 660 dbSNP
rs1322047130 666 dbSNP
rs1468418118 673 dbSNP
rs1285707732 681 dbSNP
rs773943463 683 dbSNP
rs1011440438 684 dbSNP
rs74125505 685 dbSNP
rs1320109307 689 dbSNP
rs1053553 692 dbSNP
rs1418627326 697 dbSNP
rs1167380306 701 dbSNP
rs2696 708 dbSNP
rs1443469909 710 dbSNP
rs954369926 714 dbSNP
rs1034229545 719 dbSNP
rs1001381055 728 dbSNP
rs906890492 747 dbSNP
rs544135623 748 dbSNP
rs1029991808 751 dbSNP
rs1045430567 758 dbSNP
rs751338030 784 dbSNP
rs1476121961 790 dbSNP
rs995800921 794 dbSNP
rs1170256277 796 dbSNP
rs1220080385 798 dbSNP
rs994219006 806 dbSNP
rs1414956530 816 dbSNP
rs572525144 825 dbSNP
rs532351636 831 dbSNP
rs1336008878 867 dbSNP
rs1399098502 875 dbSNP
rs896942833 875 dbSNP
rs1299051473 877 dbSNP
rs564960698 894 dbSNP
rs964565813 897 dbSNP
rs756621717 910 dbSNP
rs1274313952 921 dbSNP
rs1400867864 925 dbSNP
rs1346405332 931 dbSNP
rs909341883 933 dbSNP
rs1284425473 943 dbSNP
rs189272552 959 dbSNP
rs1217744849 960 dbSNP
rs932195324 966 dbSNP
rs923505694 971 dbSNP
rs1372330697 977 dbSNP
rs1176307824 978 dbSNP
rs1434498232 981 dbSNP
rs1006444331 990 dbSNP
rs1392916089 998 dbSNP
rs573295388 1007 dbSNP
rs1192393057 1013 dbSNP
rs886299981 1015 dbSNP
rs1418895731 1024 dbSNP
rs1239310756 1025 dbSNP
rs763651499 1029 dbSNP
rs1201112645 1030 dbSNP
rs1048265191 1036 dbSNP
rs967772699 1051 dbSNP
rs1013712832 1053 dbSNP
rs1385298787 1060 dbSNP
rs1251058573 1063 dbSNP
rs1211299899 1066 dbSNP
rs896488365 1068 dbSNP
rs1314095346 1070 dbSNP
rs1331764752 1075 dbSNP
rs762862285 1076 dbSNP
rs1132881 1087 dbSNP
rs1377828636 1089 dbSNP
rs1311331139 1090 dbSNP
rs938004901 1091 dbSNP
rs1288581928 1094 dbSNP
rs1352479499 1098 dbSNP
rs1389653521 1100 dbSNP
rs990597378 1107 dbSNP
rs957217500 1110 dbSNP
rs1451694519 1123 dbSNP
rs1194913589 1125 dbSNP
rs1395714937 1128 dbSNP
rs1034116548 1134 dbSNP
rs1467399334 1138 dbSNP
rs1001310811 1139 dbSNP
rs1373185118 1140 dbSNP
rs1456139432 1142 dbSNP
rs971310072 1147 dbSNP
rs1439737279 1154 dbSNP
rs1024638827 1160 dbSNP
rs1329363507 1163 dbSNP
rs993883496 1164 dbSNP
rs1448160249 1166 dbSNP
rs543203001 1167 dbSNP
rs1312013328 1181 dbSNP
rs1381675134 1183 dbSNP
rs896782344 1184 dbSNP
rs1244457859 1211 dbSNP
rs1283268730 1217 dbSNP
rs1356572428 1224 dbSNP
rs752665639 1230 dbSNP
rs775173329 1232 dbSNP
rs925501554 1236 dbSNP
rs575947248 1237 dbSNP
rs1252509131 1238 dbSNP
rs4535996 1244 dbSNP
rs1421862246 1247 dbSNP
rs1250437807 1248 dbSNP
rs1369314871 1252 dbSNP
rs1044005115 1253 dbSNP
rs1476298935 1257 dbSNP
rs1168699081 1261 dbSNP
rs1410576022 1268 dbSNP
rs139426438 1270 dbSNP
rs539156316 1281 dbSNP
rs1400640111 1283 dbSNP
rs914108323 1283 dbSNP
rs1335248389 1287 dbSNP
rs923588535 1291 dbSNP
rs1195361715 1295 dbSNP
rs1040991840 1303 dbSNP
rs1288196564 1304 dbSNP
rs1275842168 1305 dbSNP
rs539367103 1309 dbSNP
rs946070211 1309 dbSNP
rs1253041461 1311 dbSNP
rs770452717 1313 dbSNP
rs1199713985 1315 dbSNP
rs1256581358 1329 dbSNP
rs16831610 1332 dbSNP
rs548941602 1337 dbSNP
rs1423117554 1339 dbSNP
rs764700416 1340 dbSNP
rs1397552577 1346 dbSNP
rs1376482204 1354 dbSNP
rs1465965904 1356 dbSNP
rs1353369163 1360 dbSNP
rs1311872093 1361 dbSNP
rs1419875286 1367 dbSNP
rs923031840 1367 dbSNP
rs1398479060 1374 dbSNP
rs974352060 1378 dbSNP
rs936115688 1390 dbSNP
rs759016200 1397 dbSNP
rs1156231500 1401 dbSNP
rs927363265 1417 dbSNP
rs964428527 1428 dbSNP
rs1363712659 1436 dbSNP
rs1297073507 1440 dbSNP
rs979944246 1441 dbSNP
rs1310433729 1443 dbSNP
rs372153623 1448 dbSNP
rs1256452582 1450 dbSNP
rs1349809502 1460 dbSNP
rs1476373393 1464 dbSNP
rs764420093 1472 dbSNP
rs557267962 1476 dbSNP
rs1267191511 1480 dbSNP
rs1214123448 1490 dbSNP
rs1262790345 1490 dbSNP
rs368729932 1494 dbSNP
rs1255912750 1499 dbSNP
rs1188415633 1503 dbSNP
rs16831606 1509 dbSNP
rs566562449 1510 dbSNP
rs1264132769 1511 dbSNP
rs1203410362 1512 dbSNP
rs1397375873 1513 dbSNP
rs1026188472 1523 dbSNP
rs1013429855 1525 dbSNP
rs1418289499 1540 dbSNP
rs1350126675 1545 dbSNP
rs536016690 1546 dbSNP
rs776296304 1548 dbSNP
rs973022250 1555 dbSNP
rs961090732 1560 dbSNP
rs896540812 1568 dbSNP
rs1265923929 1579 dbSNP
rs1033780012 1580 dbSNP
rs1016984009 1581 dbSNP
rs1002185109 1582 dbSNP
rs903880733 1584 dbSNP
rs1304102958 1588 dbSNP
rs1373053522 1590 dbSNP
rs889565095 1592 dbSNP
rs1053572 1594 dbSNP
rs759324002 1606 dbSNP
rs1218220858 1613 dbSNP
rs1263847015 1615 dbSNP
rs1191803090 1619 dbSNP
rs749829107 1619 dbSNP
rs1044359568 1627 dbSNP
rs776596898 1629 dbSNP
rs1438363960 1643 dbSNP
rs945686710 1648 dbSNP
rs901967423 1656 dbSNP
rs1402743314 1660 dbSNP
rs1160864755 1666 dbSNP
rs1400387483 1668 dbSNP
rs1341924785 1672 dbSNP
rs1457000801 1677 dbSNP
rs1040647235 1679 dbSNP
rs1325969637 1679 dbSNP
rs770923431 1683 dbSNP
rs532053373 1687 dbSNP
rs1373804321 1689 dbSNP
rs200227775 1690 dbSNP
rs563128292 1691 dbSNP
rs1321316212 1692 dbSNP
rs927415741 1693 dbSNP
rs184939709 1696 dbSNP
rs1456877895 1697 dbSNP
rs980122788 1702 dbSNP
rs773340812 1709 dbSNP
rs761041984 1711 dbSNP
rs943018136 1722 dbSNP
rs908914454 1725 dbSNP
rs985113167 1726 dbSNP
rs1478362734 1740 dbSNP
rs59102401 1744 dbSNP
rs1165096959 1748 dbSNP
rs1419396200 1756 dbSNP
rs1463555201 1764 dbSNP
rs1330620027 1765 dbSNP
rs1354999198 1766 dbSNP
rs773384276 1768 dbSNP
rs1300845033 1769 dbSNP
rs748226233 1770 dbSNP
rs1191394233 1773 dbSNP
rs1200239778 1774 dbSNP
rs1446474187 1775 dbSNP
rs568739519 1786 dbSNP
rs1295284701 1789 dbSNP
rs1268082509 1798 dbSNP
rs1316165807 1799 dbSNP
rs1215665246 1802 dbSNP
rs1016834997 1807 dbSNP
rs546444025 1809 dbSNP
rs772483821 1810 dbSNP
rs953687792 1820 dbSNP
rs1028077391 1839 dbSNP
rs1033748913 1840 dbSNP
rs1002326021 1841 dbSNP
rs146260378 1848 dbSNP
rs997909301 1848 dbSNP
rs774903484 1851 dbSNP
rs1218998920 1862 dbSNP
rs1019558390 1863 dbSNP
rs1319812715 1865 dbSNP
rs560026743 1868 dbSNP
rs118014330 1870 dbSNP
rs768901081 1871 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545215. RNA binding protein: AGO4. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acggaggagguccuaGGUGUGu 5'
                         |||||| 
Target 5' ----------acacaCCACACa 3'
1 - 12
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545215
Method / RBP PAR-CLIP / AGO4
Cell line / Condition HEK293 / Control
Location of target site ENST00000368073.3 | 3UTR | ACACACCACACACAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC 0.398 0.19 0.571 0.09 7 Click to see details
LUSC 0.584 0.21 0.800 0.1 4 Click to see details
BRCA -0.175 0.39 0.200 0.37 5 Click to see details
THCA -0.104 0.45 -0.400 0.3 4 Click to see details
THCA -0.104 0.45 -0.400 0.3 4 Click to see details
THCA -0.104 0.45 -0.400 0.3 4 Click to see details
THCA -0.104 0.45 -0.400 0.3 4 Click to see details
THCA -0.104 0.45 -0.400 0.3 4 Click to see details
THCA -0.104 0.45 -0.400 0.3 4 Click to see details
THCA -0.104 0.45 -0.400 0.3 4 Click to see details
70 hsa-miR-3911 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT207399 MAT2A methionine adenosyltransferase 2A 2 6
MIRT284537 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT291946 TPM4 tropomyosin 4 2 2
MIRT293609 PVR poliovirus receptor 2 2
MIRT357688 PAIP2 poly(A) binding protein interacting protein 2 2 2
MIRT451607 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT452110 IFITM1 interferon induced transmembrane protein 1 2 2
MIRT457804 KLHL25 kelch like family member 25 2 2
MIRT462730 EFNB1 ephrin B1 2 2
MIRT463219 ZNF131 zinc finger protein 131 2 2
MIRT464141 VPS28 VPS28, ESCRT-I subunit 2 2
MIRT467582 SLC7A5 solute carrier family 7 member 5 2 6
MIRT470824 PLXND1 plexin D1 2 2
MIRT474230 LCLAT1 lysocardiolipin acyltransferase 1 2 2
MIRT478989 COLGALT1 collagen beta(1-O)galactosyltransferase 1 2 2
MIRT479462 CDK6 cyclin dependent kinase 6 2 2
MIRT483558 SYT2 synaptotagmin 2 2 2
MIRT484483 SLC9A1 solute carrier family 9 member A1 2 2
MIRT485224 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT490356 DPYSL5 dihydropyrimidinase like 5 2 4
MIRT493177 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT509802 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT511815 HDGF heparin binding growth factor 2 2
MIRT512254 ARPP19 cAMP regulated phosphoprotein 19 2 6
MIRT513025 GPT2 glutamic--pyruvic transaminase 2 2 2
MIRT519640 ZNF772 zinc finger protein 772 2 4
MIRT531178 SIGLEC12 sialic acid binding Ig like lectin 12 (gene/pseudogene) 2 2
MIRT537870 EDA2R ectodysplasin A2 receptor 2 2
MIRT551914 IGLON5 IgLON family member 5 2 2
MIRT558359 DMTF1 cyclin D binding myb like transcription factor 1 2 2
MIRT559771 URGCP-MRPS24 URGCP-MRPS24 readthrough 2 4
MIRT559813 ZNF83 zinc finger protein 83 2 2
MIRT561999 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT565754 SERTAD2 SERTA domain containing 2 2 2
MIRT569423 DCAF8 DDB1 and CUL4 associated factor 8 2 2
MIRT569845 RGS5 regulator of G protein signaling 5 2 2
MIRT606928 CDK15 cyclin dependent kinase 15 2 2
MIRT607616 TMEM130 transmembrane protein 130 2 4
MIRT607629 TRIOBP TRIO and F-actin binding protein 2 2
MIRT607885 SATB1 SATB homeobox 1 2 2
MIRT607942 SSX2 SSX family member 2 2 4
MIRT608017 CARNS1 carnosine synthase 1 2 4
MIRT608036 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT608063 SSX2B SSX family member 2B 2 4
MIRT608558 SBK1 SH3 domain binding kinase 1 2 6
MIRT608915 NCDN neurochondrin 2 6
MIRT615876 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 2 4
MIRT618023 ELFN1 extracellular leucine rich repeat and fibronectin type III domain containing 1 2 2
MIRT620505 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT628101 IL1RAPL1 interleukin 1 receptor accessory protein like 1 2 2
MIRT628700 ZNF548 zinc finger protein 548 2 2
MIRT630658 POU2F1 POU class 2 homeobox 1 2 2
MIRT643508 ZNF28 zinc finger protein 28 2 2
MIRT646379 SLC22A6 solute carrier family 22 member 6 2 2
MIRT660041 C15orf61 chromosome 15 open reading frame 61 2 2
MIRT687700 KRR1 KRR1, small subunit processome component homolog 2 2
MIRT688858 CAMKK2 calcium/calmodulin dependent protein kinase kinase 2 2 2
MIRT690443 REPIN1 replication initiator 1 2 2
MIRT690456 ZNF33A zinc finger protein 33A 2 2
MIRT693796 RHOG ras homolog family member G 2 2
MIRT694274 ZNF529 zinc finger protein 529 2 4
MIRT697697 WAC WW domain containing adaptor with coiled-coil 2 2
MIRT700242 RCC2 regulator of chromosome condensation 2 2 2
MIRT701836 MRPL37 mitochondrial ribosomal protein L37 2 2
MIRT704255 DHCR24 24-dehydrocholesterol reductase 2 2
MIRT707203 SDK2 sidekick cell adhesion molecule 2 2 2
MIRT710365 CREB5 cAMP responsive element binding protein 5 2 2
MIRT711943 WDFY1 WD repeat and FYVE domain containing 1 2 2
MIRT715496 MAZ MYC associated zinc finger protein 2 2
MIRT719250 MS4A1 membrane spanning 4-domains A1 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3911 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3911 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-3911 Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-3911 Dabrafenib 44462760 NSC764134 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-3911 Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-3911 Fulvestrant 17756771 NSC719276 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-mir-3911 Vincristine 5978 approved resistant cell line (W1)
hsa-mir-3911 Androstenedione+Letrozole sensitive cell line (MCF-7)
hsa-miR-3911 Palbociclib 5330286 NSC758247 approved resistant tissue (breast cancer)
hsa-miR-3911 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3911 Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-3911 Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-3911 Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-3911 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3911 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-3911 Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide resistant cell line (Bads-200)

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