pre-miRNA Information
pre-miRNA hsa-mir-125b-2   
Genomic Coordinates chr21: 16590237 - 16590325
Synonyms MIRN125B2, MIR125B2
Description Homo sapiens miR-125b-2 stem-loop
Comment This miRNA sequence is predicted based on homology to a verified miRNA from mouse .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-125b-2-3p
Sequence 54| UCACAAGUCAGGCUCUUGGGAC |75
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 3 21 + 16590292 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs575583557 6 dbSNP
rs1331783293 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol JKAMP   
Synonyms C14orf100, C24orf100, CDA06, HSPC213, HSPC327, JAMP
Description JNK1/MAPK8-associated membrane protein
Transcript NM_001098625   
Other Transcripts NM_016475   
Expression
Putative miRNA Targets on JKAMP
3'UTR of JKAMP
(miRNA target sites are highlighted)
>JKAMP|NM_001098625|3'UTR
   1 GTGTAGACATGTGAAATGCCAAAAACCTGAGAAGTGCTCCTAATAAAAAAGTAAATCAATCTTAACAGTGTATGAGAACT
  81 ATTCTATCATATATGGGAACAAGATTGTCAGTATATCTTAATGTTTGGGTTTGTCTTTGTTTTGTTTATGGTTAGACTTA
 161 CAGACTTGGAAAATGCAAAACTCTGTAATACTCTGTTACACAGGGTAATATTATCTGCTACACTGGAAGGCCGCTAGGAA
 241 GCCCTTGCTTCTCTCAACAGTTCAGCTGTTCTTTAGGGCAAAATCATGTTTCTGTGTACCTAGCAATGTGTTCCCATTTT
 321 ATTAAGAAAAGCTTTAACACGTGTAATCTGCAGTCCTTAACAGTGGCGTAATTGTACTTACCTGTTGTGTTTCAGTTTGT
 401 TTTTCACCTATAATGAATTGTAAAAACAAACATACTTGTGGGGTCTGATAGCAAACATAGAAATGATGTATATTGTTTTT
 481 TGTTATCTATTTATTTTCATCAATACAGTATTTTGATGTATTGCAAAAATAGATAATAATTTATATAACAGGTTTTCTGT
 561 TTATAGATTGGTTCAAGATTTGTTTGGATTATTGTTCCTGTAAAGAAAACAATAATAAAAAGCTTACCTACATAAAATTT
 641 CAATGTTTTGACACTTAATTGTTGTTTGGCACAATAGTATGGAAGTAATTCAAACTGGTAAATAGTTTCCTCTCATATCT
 721 CGGGTATATATACATACCATATTTTATTGATCCAGAGATACTTATTTCACTTTGTGACATCTCTGAATTAGGATGCATCT
 801 TACAACTGATGGCTTATTAGATTTAATGAAATACAGAAGATACACAGAATAAAAAGGGTTTTCCTGTGGTTGGTTTGTGG
 881 TTTGTGATAGGTGTTCTGTGATGTTTATGCTTTGAAGGCCTTAAGACTCATGGTTGCAACCATGGAAGCAAAATGAAATT
 961 TTTAGCTCTTAACCTAACAACCTGACCATGTTTATCCATTTTTATTGTTTAGAAGTTTATTTACTGATACTTGGTGGAGG
1041 TTGTGTGAATTAGTTAAATTTTAAATGTTTAAGACTTCTATTAACAGCTGCAAAATATGAAAGTAAGTGCACTCACTTTT
1121 CCTGTAGTAGTCTGTCTTTTGAATTCACAGCAGTTGTATCCTTGAGTTACTTTGTTAATGTATTTTTCTCAGTACATTTA
1201 ACCACTGGGAAATGAACCCTTGTACGAATGTGTTTCTTCTTCTCTGTAGGAATAAAAAATAAATATAAAAATTTTATTTG
1281 TATTGCACACATTTGGGGGGTTATTAGTGTTCATTAAAATTCTGAGTTGCCCAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cagggUUCUCGGACUGAACACu 5'
               || |  |  ||||||| 
Target 5' gtaaaAACAAACATACTTGTGg 3'
420 - 441 145.00 -9.60
2
miRNA  3' caGGGUUCUCGGACUGAACACu 5'
            ::|  | | :||::||||| 
Target 5' ttTTCCTGTGGTTGGTTTGTGg 3'
859 - 880 124.00 -16.90
3
miRNA  3' caggGUUCUCGGACUGAACAcu 5'
              :|| | ::| |:||||  
Target 5' aataTAAAAATTTTATTTGTat 3'
1262 - 1283 118.00 -5.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30474457 7 COSMIC
COSN30456689 13 COSMIC
COSN1655556 43 COSMIC
COSN30132761 51 COSMIC
COSN21342233 159 COSMIC
COSN20843398 216 COSMIC
COSN32057950 250 COSMIC
COSN8155579 368 COSMIC
COSN31523730 452 COSMIC
COSN31548447 533 COSMIC
COSN31609042 567 COSMIC
COSN31960989 860 COSMIC
COSM3386606 1226 COSMIC
COSM9021287 1227 COSMIC
COSM3356696 1245 COSMIC
COSN29257262 1263 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1432377028 3 dbSNP
rs1309969083 5 dbSNP
rs377472890 9 dbSNP
rs773890698 16 dbSNP
rs1231470075 18 dbSNP
rs1435997666 26 dbSNP
rs766973688 32 dbSNP
rs1370170518 34 dbSNP
rs751749756 36 dbSNP
rs1274472581 37 dbSNP
rs1340662895 45 dbSNP
rs1202348760 51 dbSNP
rs1208789246 57 dbSNP
rs1030384798 60 dbSNP
rs538982506 68 dbSNP
rs1224203911 86 dbSNP
rs1455686205 87 dbSNP
rs148380441 88 dbSNP
rs1007727932 89 dbSNP
rs1355658741 90 dbSNP
rs976835167 91 dbSNP
rs1314385770 93 dbSNP
rs1412568076 93 dbSNP
rs762440620 106 dbSNP
rs1159206426 134 dbSNP
rs1402895087 149 dbSNP
rs1406500325 150 dbSNP
rs1383357919 152 dbSNP
rs35105149 153 dbSNP
rs1475766568 157 dbSNP
rs1029293997 158 dbSNP
rs1018186672 162 dbSNP
rs1485469535 164 dbSNP
rs371261582 178 dbSNP
rs963696370 182 dbSNP
rs974051068 186 dbSNP
rs1026544630 195 dbSNP
rs950376987 199 dbSNP
rs985712123 201 dbSNP
rs1335185288 202 dbSNP
rs1239553432 203 dbSNP
rs748299528 209 dbSNP
rs188117772 212 dbSNP
rs1231008833 218 dbSNP
rs915492275 222 dbSNP
rs1288930868 223 dbSNP
rs946910742 225 dbSNP
rs1343917915 226 dbSNP
rs1318190884 227 dbSNP
rs917006974 228 dbSNP
rs1163241099 230 dbSNP
rs978219159 230 dbSNP
rs141516232 233 dbSNP
rs147036906 234 dbSNP
rs543037092 236 dbSNP
rs925767870 247 dbSNP
rs1207991118 249 dbSNP
rs573176742 249 dbSNP
rs7560 250 dbSNP
rs562950965 252 dbSNP
rs948026526 258 dbSNP
rs574204003 259 dbSNP
rs13704 266 dbSNP
rs1359200722 268 dbSNP
rs1414466114 275 dbSNP
rs1269082288 278 dbSNP
rs891684060 280 dbSNP
rs372020572 284 dbSNP
rs1044372824 293 dbSNP
rs1461283581 297 dbSNP
rs888344738 299 dbSNP
rs890578584 307 dbSNP
rs191765033 308 dbSNP
rs1418816600 310 dbSNP
rs1194357728 312 dbSNP
rs1406955377 314 dbSNP
rs1467487296 324 dbSNP
rs1300980889 329 dbSNP
rs1017800203 334 dbSNP
rs1401470412 337 dbSNP
rs1391747879 341 dbSNP
rs138385628 342 dbSNP
rs896913772 368 dbSNP
rs994988149 369 dbSNP
rs754111590 373 dbSNP
rs1283311479 378 dbSNP
rs1956367 379 dbSNP
rs779548531 393 dbSNP
rs1300273341 396 dbSNP
rs527847846 396 dbSNP
rs1228336326 400 dbSNP
rs549179208 400 dbSNP
rs567636257 401 dbSNP
rs992534554 410 dbSNP
rs538362583 411 dbSNP
rs1006495485 413 dbSNP
rs529502303 416 dbSNP
rs1230485294 418 dbSNP
rs531741633 419 dbSNP
rs73303700 419 dbSNP
rs1396790444 421 dbSNP
rs1191618264 422 dbSNP
rs534671647 422 dbSNP
rs1432526970 424 dbSNP
rs1250898350 429 dbSNP
rs968243740 434 dbSNP
rs978248418 437 dbSNP
rs1483239758 442 dbSNP
rs369447079 444 dbSNP
rs1479449354 455 dbSNP
rs969864293 459 dbSNP
rs1210949101 469 dbSNP
rs1196684127 470 dbSNP
rs1277617799 471 dbSNP
rs1233081114 473 dbSNP
rs1318066852 475 dbSNP
rs182798417 477 dbSNP
rs1482170482 480 dbSNP
rs1372833111 482 dbSNP
rs746011904 487 dbSNP
rs777546909 488 dbSNP
rs925700249 490 dbSNP
rs935843369 504 dbSNP
rs1465472659 505 dbSNP
rs78844283 514 dbSNP
rs542960354 519 dbSNP
rs1160975855 523 dbSNP
rs1417129902 524 dbSNP
rs1250827817 525 dbSNP
rs758577298 525 dbSNP
rs1486452695 533 dbSNP
rs1254702589 535 dbSNP
rs1199449509 536 dbSNP
rs113062316 545 dbSNP
rs143938359 546 dbSNP
rs909811473 566 dbSNP
rs1309559713 581 dbSNP
rs1328856692 596 dbSNP
rs1051747656 610 dbSNP
rs1235304601 617 dbSNP
rs1408794079 623 dbSNP
rs1312345437 625 dbSNP
rs890439109 628 dbSNP
rs1385546600 638 dbSNP
rs771498648 644 dbSNP
rs1369340261 647 dbSNP
rs768718700 658 dbSNP
rs572391731 659 dbSNP
rs543948980 663 dbSNP
rs1475978412 664 dbSNP
rs897022930 670 dbSNP
rs1312068496 673 dbSNP
rs1415302706 700 dbSNP
rs536418453 706 dbSNP
rs1047923589 711 dbSNP
rs1263250006 715 dbSNP
rs1340443028 722 dbSNP
rs1464849728 724 dbSNP
rs1204957907 725 dbSNP
rs1269855159 730 dbSNP
rs1489627372 732 dbSNP
rs1189481370 735 dbSNP
rs769785207 737 dbSNP
rs1283869022 740 dbSNP
rs554784116 753 dbSNP
rs1006526518 754 dbSNP
rs1170445078 756 dbSNP
rs1021892813 762 dbSNP
rs1328230591 771 dbSNP
rs968274742 779 dbSNP
rs999748208 789 dbSNP
rs886726120 798 dbSNP
rs576035133 804 dbSNP
rs187483242 810 dbSNP
rs1391805170 812 dbSNP
rs1162229678 814 dbSNP
rs11545225 822 dbSNP
rs1374229054 823 dbSNP
rs1190469086 829 dbSNP
rs1456080359 838 dbSNP
rs1292390523 839 dbSNP
rs192466466 844 dbSNP
rs1195865272 846 dbSNP
rs1467378958 848 dbSNP
rs12587515 849 dbSNP
rs1196531903 862 dbSNP
rs1300419839 864 dbSNP
rs1001177417 866 dbSNP
rs559753636 869 dbSNP
rs1281807428 870 dbSNP
rs76315838 885 dbSNP
rs957103077 887 dbSNP
rs1364337828 897 dbSNP
rs1291043478 898 dbSNP
rs879105599 902 dbSNP
rs988642324 910 dbSNP
rs76130439 928 dbSNP
rs879858043 931 dbSNP
rs1322660458 935 dbSNP
rs1410169075 938 dbSNP
rs913058571 941 dbSNP
rs528010099 944 dbSNP
rs1264896073 946 dbSNP
rs1176030066 955 dbSNP
rs909171845 959 dbSNP
rs1465376473 969 dbSNP
rs1190649846 970 dbSNP
rs1183064560 973 dbSNP
rs1439776763 978 dbSNP
rs1248739910 979 dbSNP
rs1204503107 989 dbSNP
rs1348621472 997 dbSNP
rs1282604192 1002 dbSNP
rs1236319015 1008 dbSNP
rs1342805596 1010 dbSNP
rs1246096444 1011 dbSNP
rs1442709575 1012 dbSNP
rs1337137626 1029 dbSNP
rs1305740373 1032 dbSNP
rs955319982 1038 dbSNP
rs773686728 1046 dbSNP
rs1448854743 1050 dbSNP
rs986662045 1073 dbSNP
rs911117144 1074 dbSNP
rs943373208 1076 dbSNP
rs1471391586 1078 dbSNP
rs1362445752 1081 dbSNP
rs1038996867 1086 dbSNP
rs528785088 1097 dbSNP
rs920716801 1098 dbSNP
rs1259638753 1099 dbSNP
rs930708229 1101 dbSNP
rs1440596029 1108 dbSNP
rs1163597644 1112 dbSNP
rs1345471960 1115 dbSNP
rs1276132256 1127 dbSNP
rs1437952566 1135 dbSNP
rs779479131 1137 dbSNP
rs759659097 1139 dbSNP
rs1244681995 1140 dbSNP
rs1227332044 1141 dbSNP
rs1478854995 1146 dbSNP
rs1194035554 1149 dbSNP
rs1355758303 1151 dbSNP
rs1334316090 1155 dbSNP
rs185886094 1159 dbSNP
rs1036992641 1163 dbSNP
rs767640870 1167 dbSNP
rs1170463917 1172 dbSNP
rs1314175384 1179 dbSNP
rs752906984 1180 dbSNP
rs147187247 1181 dbSNP
rs777663302 1183 dbSNP
rs1359077824 1197 dbSNP
rs1321810153 1198 dbSNP
rs1319507852 1204 dbSNP
rs138609862 1208 dbSNP
rs1437547631 1210 dbSNP
rs1051345050 1213 dbSNP
rs1158912002 1218 dbSNP
rs372589645 1220 dbSNP
rs1297356546 1222 dbSNP
rs1363531224 1223 dbSNP
rs376036837 1225 dbSNP
rs1299084960 1226 dbSNP
rs778816267 1227 dbSNP
rs1043381937 1230 dbSNP
rs531704276 1231 dbSNP
rs746033728 1231 dbSNP
rs1287224034 1233 dbSNP
rs146562268 1234 dbSNP
rs1214036873 1236 dbSNP
rs1247159303 1239 dbSNP
rs1463408386 1240 dbSNP
rs780132973 1242 dbSNP
rs1190427487 1250 dbSNP
rs1241537417 1253 dbSNP
rs1373628673 1254 dbSNP
rs1207953111 1258 dbSNP
rs1335043135 1260 dbSNP
rs771550199 1263 dbSNP
rs1462443434 1269 dbSNP
rs761738395 1271 dbSNP
rs1182294483 1272 dbSNP
rs779590492 1274 dbSNP
rs1032678055 1275 dbSNP
rs1260956534 1278 dbSNP
rs1406151553 1282 dbSNP
rs1320194315 1294 dbSNP
rs1363722074 1295 dbSNP
rs957384360 1295 dbSNP
rs1009929388 1301 dbSNP
rs1397165613 1309 dbSNP
rs1239180056 1328 dbSNP
rs1162891960 1333 dbSNP
rs550209663 1334 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545212. RNA binding protein: AGO1. Condition:Control PAR-CLIP data was present in GSM545214. RNA binding protein: AGO3. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' cagggUUCUCGGACUGAACACu 5'
               || |  |  ||||||| 
Target 5' -uaaaAACAAACAUACUUGUGg 3'
1 - 21
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545212
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / Control
Location of target site ENST00000261247.9 | 3UTR | UAAAAACAAACAUACUUGUGGGGUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM545214
Method / RBP PAR-CLIP / AGO3
Cell line / Condition HEK293 / Control
Location of target site ENST00000261247.9 | 3UTR | UAAAAACAAACAUACUUGUGGGGUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28544 Breast cancer -0.393 2.9e-2 -0.265 1.1e-1 24 Click to see details
GSE21687 Ependynoma primary tumors 0.221 4.0e-2 0.249 2.4e-2 64 Click to see details
GSE19350 CNS germ cell tumors 0.469 6.2e-2 0.428 8.3e-2 12 Click to see details
GSE19783 ER- ER- breast cancer 0.119 1.5e-1 0.112 1.6e-1 79 Click to see details
GSE19783 ER+ ER+ breast cancer 0.244 1.5e-1 0.215 1.8e-1 20 Click to see details
GSE28260 Renal cortex and medulla -0.296 1.6e-1 -0.357 1.2e-1 13 Click to see details
GSE26953 Aortic valvular endothelial cells -0.204 1.7e-1 -0.192 1.8e-1 24 Click to see details
GSE15076 Monocyte-derived dendritic cells -0.854 1.7e-1 -0.500 3.3e-1 3 Click to see details
GSE19536 Breast cancer 0.093 1.8e-1 0.109 1.4e-1 100 Click to see details
GSE42095 Differentiated embryonic stem cells -0.197 1.8e-1 -0.005 4.9e-1 23 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.187 1.9e-1 0.212 1.5e-1 25 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.17 2.4e-1 0.340 7.1e-2 20 Click to see details
GSE32688 Pancreatic cancer -0.086 3.2e-1 0.129 2.4e-1 32 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.087 3.4e-1 0.024 4.5e-1 25 Click to see details
GSE21032 Prostate cancer -0.008 4.7e-1 -0.030 3.9e-1 83 Click to see details
GSE38226 Liver fibrosis -0.002 5.0e-1 0.033 4.4e-1 21 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
STAD -0.524 0 -0.540 0 32 Click to see details
PRAD 0.383 0 0.387 0 50 Click to see details
KIRP 0.281 0.06 0.284 0.06 32 Click to see details
LIHC -0.187 0.1 -0.090 0.27 49 Click to see details
COAD 0.465 0.12 0.524 0.09 8 Click to see details
BRCA -0.122 0.13 -0.101 0.18 84 Click to see details
KIRC -0.124 0.16 -0.134 0.14 68 Click to see details
HNSC -0.147 0.18 -0.229 0.07 42 Click to see details
LUAD 0.278 0.19 0.168 0.3 12 Click to see details
KICH 0.181 0.19 0.278 0.09 25 Click to see details
UCEC 0.207 0.2 0.012 0.48 19 Click to see details
ESCA 0.256 0.22 0.127 0.35 11 Click to see details
CESC 0.759 0.23 0.500 0.33 3 Click to see details
CHOL 0.233 0.27 0.283 0.23 9 Click to see details
BLCA 0.13 0.3 0.191 0.22 18 Click to see details
PAAD -0.391 0.3 -0.800 0.1 4 Click to see details
THCA 0.059 0.33 0.035 0.4 59 Click to see details
LUSC -0.009 0.48 0.075 0.33 38 Click to see details
PCPG 0.062 0.48 0.500 0.33 3 Click to see details
PCPG 0.062 0.48 0.500 0.33 3 Click to see details
PCPG 0.062 0.48 0.500 0.33 3 Click to see details
91 hsa-miR-125b-2-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT038624 HN1L Jupiter microtubule associated homolog 2 1 1
MIRT038625 KDELC2 KDEL motif containing 2 1 1
MIRT038626 ABHD15 abhydrolase domain containing 15 1 1
MIRT038627 PPP1R12C protein phosphatase 1 regulatory subunit 12C 1 1
MIRT038628 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 1 1
MIRT038629 ASH2L ASH2 like histone lysine methyltransferase complex subunit 1 1
MIRT038630 USP22 ubiquitin specific peptidase 22 1 1
MIRT038631 CSTB cystatin B 1 1
MIRT038632 SYT2 synaptotagmin 2 1 1
MIRT038633 NDUFS7 NADH:ubiquinone oxidoreductase core subunit S7 1 1
MIRT038634 MTA2 metastasis associated 1 family member 2 1 1
MIRT053086 IGF1R insulin like growth factor 1 receptor 3 1
MIRT055788 PLEKHA1 pleckstrin homology domain containing A1 2 12
MIRT061248 AMOTL1 angiomotin like 1 2 10
MIRT061649 BTG2 BTG anti-proliferation factor 2 2 6
MIRT079046 TNRC6C trinucleotide repeat containing 6C 2 4
MIRT084583 BCL2L11 BCL2 like 11 2 8
MIRT093523 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 2
MIRT097383 LHFPL2 LHFPL tetraspan subfamily member 2 2 4
MIRT098030 SOBP sine oculis binding protein homolog 2 2
MIRT186262 TCEB3 elongin A 2 2
MIRT187284 DAZAP2 DAZ associated protein 2 2 10
MIRT361113 LRRC1 leucine rich repeat containing 1 2 2
MIRT443585 FAM84B family with sequence similarity 84 member B 2 2
MIRT452249 TRAM1 translocation associated membrane protein 1 2 2
MIRT476289 GMFB glia maturation factor beta 2 8
MIRT483871 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT484250 ANK1 ankyrin 1 2 2
MIRT499251 VAV3 vav guanine nucleotide exchange factor 3 2 4
MIRT502270 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 4
MIRT504652 RPL9 ribosomal protein L9 2 6
MIRT505210 UBN2 ubinuclein 2 2 6
MIRT512690 POP1 POP1 homolog, ribonuclease P/MRP subunit 2 2
MIRT517341 ZNF529 zinc finger protein 529 2 4
MIRT518946 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT520866 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521236 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT528324 GIGYF2 GRB10 interacting GYF protein 2 2 2
MIRT533297 USP46 ubiquitin specific peptidase 46 2 2
MIRT541024 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT544034 ERRFI1 ERBB receptor feedback inhibitor 1 2 2
MIRT547037 POGZ pogo transposable element derived with ZNF domain 2 2
MIRT556102 MOAP1 modulator of apoptosis 1 2 2
MIRT558320 DR1 down-regulator of transcription 1 2 2
MIRT558520 CSRNP3 cysteine and serine rich nuclear protein 3 2 2
MIRT566230 PTMA prothymosin, alpha 2 4
MIRT568437 ARPP19 cAMP regulated phosphoprotein 19 2 2
MIRT570584 OTUD7B OTU deubiquitinase 7B 2 2
MIRT571384 JKAMP JNK1/MAPK8-associated membrane protein 2 2
MIRT572798 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT573864 C9orf78 chromosome 9 open reading frame 78 2 2
MIRT609930 SLC38A1 solute carrier family 38 member 1 2 4
MIRT610437 CSMD2 CUB and Sushi multiple domains 2 2 2
MIRT614407 MURC caveolae associated protein 4 2 2
MIRT618625 GREB1 growth regulation by estrogen in breast cancer 1 2 2
MIRT620605 SAP30 Sin3A associated protein 30 2 2
MIRT635313 FAM179A TOG array regulator of axonemal microtubules 2 2 2
MIRT635918 GLTSCR2 NOP53 ribosome biogenesis factor 2 2
MIRT638507 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT640597 TM9SF4 transmembrane 9 superfamily member 4 2 2
MIRT644066 IQCE IQ motif containing E 2 2
MIRT648287 TRAPPC2L trafficking protein particle complex 2 like 2 2
MIRT653089 SSR3 signal sequence receptor subunit 3 2 2
MIRT654651 PTAFR platelet activating factor receptor 2 2
MIRT658084 FOXR2 forkhead box R2 2 2
MIRT665306 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT665974 SYTL4 synaptotagmin like 4 2 2
MIRT674905 RASSF9 Ras association domain family member 9 2 2
MIRT680085 THAP1 THAP domain containing 1 2 2
MIRT681487 DIP2A disco interacting protein 2 homolog A 2 2
MIRT691243 DFNB59 pejvakin 2 2
MIRT692361 AGTRAP angiotensin II receptor associated protein 2 2
MIRT693034 MB21D1 Mab-21 domain containing 1 2 2
MIRT694478 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT696069 ZNF264 zinc finger protein 264 2 2
MIRT696579 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696759 MTFMT mitochondrial methionyl-tRNA formyltransferase 2 2
MIRT697306 ZNF652 zinc finger protein 652 2 2
MIRT698736 STX12 syntaxin 12 2 2
MIRT701055 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT701197 OTUD3 OTU deubiquitinase 3 2 2
MIRT701334 NSD1 nuclear receptor binding SET domain protein 1 2 2
MIRT703617 FBXO45 F-box protein 45 2 2
MIRT708893 ZNF780A zinc finger protein 780A 2 2
MIRT711621 DGKH diacylglycerol kinase eta 2 2
MIRT713744 TMEM81 transmembrane protein 81 2 2
MIRT715060 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT719711 CD101 CD101 molecule 2 2
MIRT720293 DLGAP3 DLG associated protein 3 2 2
MIRT722605 CCDC152 coiled-coil domain containing 152 2 2
MIRT724565 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-125b-2 Ascorbate approved 54670067 Microarray Metastatic melanoma cell lines 25202679 2014 up-regualted
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-125b-2 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-125b-2 Methotrexate 126941 NSC740 approved resistant High Colorectal Adenocarcinoma cell line (HT-29)
hsa-mir-125b-2 Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia tissue
hsa-mir-125b-2 Doxorubicin 31703 NSC123127 approved sensitive Low Hepatocellular Carcinoma cell line (Huh-7, HLE, HuH1)
hsa-mir-125b-2 Dabrafenib 44462760 NSC764134 approved resistant High Melanoma cell line (A375)
hsa-mir-125b-2 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-125b-2 Paclitaxel 36314 NSC125973 approved resistant cell line (W1)
hsa-mir-125b-2 Topotecan 60699 NSC609699 approved resistant cell line (W1)
hsa-mir-125b-2 Vincristine 5978 approved resistant cell line (W1)
hsa-mir-125b-2 Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-mir-125b-2 Tamoxifen 2733525 NSC180973 approved resistant tissue (ER-positive breast cancer)
hsa-mir-125b-2 Tamoxifen 2733525 NSC180973 approved sensitive cell line (MCF7)
hsa-mir-125b-2 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-125b-2-3p Platinum 23939 resistant High Ovarian Cancer tissue
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved sensitive Low Cervical Cancer tissue
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (BGC823)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (SGC-7901)
hsa-miR-125b-2-3p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-125b-2-3p Dabrafenib 44462760 NSC764134 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-125b-2-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer tissue
hsa-miR-125b-2-3p Fluorouracil 3385 NSC19893 approved resistant High Gastric Cancer tissue
hsa-miR-125b-2-3p Cyclophosphamide + Doxorubicin + Vincristine + Prednisone + Rituximab resistant High Diffuse Large B-Cell Lymphoma cell line (SU-DHL-2)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (SGC-7901, BGC-823)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved resistant High Lung Adenocarcinoma cell line (A549)
hsa-miR-125b-2-3p Oxaliplatin 6857599 NSC266046 approved sensitive Low Colorectal Cancer cell line (HCT8, HCT-116)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780)
hsa-miR-125b-2-3p Antiepileptic Drug sensitive High Pediatric Epilepsy tissue
hsa-miR-125b-2-3p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-miR-125b-2-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-125b-2-3p 4-Hydroxytamoxifen+Tamoxifen resistant cell line (LY2)
hsa-miR-125b-2-3p Ethanol+Tamoxifen resistant cell line (LY2)
hsa-miR-125b-2-3p Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-miR-125b-2-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardB)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-125b-2-3p Oxaliplatin 6857599 NSC266046 approved resistant cell line (IGROV-1)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved resistant cell line (IGROV-1)
hsa-miR-125b-2-3p Paclitaxel 36314 NSC125973 approved resistant cell line (PC3PR70)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-125b-2-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-125b-2-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (100 ng/ml)
hsa-miR-125b-2-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved resistant cell line (SGC-7901)
hsa-miR-125b-2-3p Cisplatin 5460033 NSC119875 approved resistant cell line (BGC-823)

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