pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol EXOC8   
Synonyms EXO84, Exo84p, SEC84
Description exocyst complex component 8
Transcript NM_175876   
Expression
Putative miRNA Targets on EXOC8
3'UTR of EXOC8
(miRNA target sites are highlighted)
>EXOC8|NM_175876|3'UTR
   1 TGCTTGGGTCTGTTTATATGTGTATATATGCAGAGAGAGAGCTTATATATTATTTATATTTATATTAAGTTGTATTAGCA
  81 TACTCTATAGTTTCAAACACAACTTGAAAATTAAAAGTGCCCTCTTAAAAATACAAAAATCAAAAAGAGGAAAATAAGTT
 161 AAATTAAGCCCAAGTAACAAAAATACTGGAATTATTAAAACGTATAGTATGCTAGCTATCCTTTTAAATTATGCTAATTC
 241 TCTTCTTCTGAAATTATGGTCACACTATATACTATAGCATTTCGGTTTTATCCTTTGATAAAACTTTTCTTTTTTCTTTT
 321 TTTTTTTTGAGACAGGGTCTCACCCCGTCGCACAGGCTGGAGTGCAGTGGCAAAGTCTCGACTCACTGCAGCCTTGACCT
 401 CCCGGGCCCAGGTAGTCCTCCCACCTCAGCCTCCCATGTAGCAGGAACCACAGGCAGGCACCACCATACCCAGCTAATTT
 481 TTGTATTTTTTGTAGAGATGGGGTTTCGCCATGTTGCCCAGGCTAGTCTTTTCTTTCTTCTTTTTTTTTTTCCCCACAGT
 561 ATATATTATACAGCAGTCATAATATCTATAAATACATAGAGTTTATGTTGTGAAGTTTCCCAGTTCACTGAAATGTTAGG
 641 TTTCCTAAAGGGTACAGTGCCGTATAAAACAACCTGCCTCATATATTTCTCCTCAAAACGTTGGACTATTTGGGAAAAGG
 721 AAAAGAGTTGGGAAAATTGGTTTTAAGGTAAGTTTTAGTCAAAAGAATTCTTTCTTGAAACTAGCTGGTTTGTGGATTCA
 801 GATACTCTGATCCTTACAGAATCCAAGAGGAAGCTTTCATAAAAACAATTCAGCAAATATTTCCAATATAATTTGAATGG
 881 CTAATTTTCAGTTGCTAATTAATTAGCAGCTTTGTAATACTTGATTTGGGAGCATTTACTTGGAAATCCTAAGGACTATA
 961 ATAAAAGTTTTCAACATATTTCTAAATTGTGTGAGTTTCCAGCTGTAGCTTTTGTCTTTGTCACATTTTAAAAAATAATA
1041 AGCAAGACACATTGGGGACACTGGCAGCAGTTGCCAGGTTTTAGCTGCCACCGCTTCAGTATGAGATATAGCTGTCCCAT
1121 CTTCCCCCATTCAGGGTAGGAGATATAGTGACCCAGACTTCATGCAAATGGAAAAAAAGTTTTAACTGAAATATTTATTT
1201 AGATTTCAGGGTCTAGATGGATGGGAAAGTAGAAAAACATATGCAAATCTCAGTGTTCTCACTATGACCACTCTGAGCAG
1281 AGATTTGGTTTTGTTTCCTTTTGTAACAAAGTGAAAACAGGTGAGACAATGTGCCCAAAACAAAGGGAAGAAGAGAACCT
1361 TCTGTGACTCCTAAAATGTTCCATGCTGCATTTTTGTTTCATTTTTTATTTTTCCTTGCTTTGTTTTTAAACATGAATAT
1441 AATGCTTACTTCAAATTGTTTAGTAAAACAAAATAACTAAAGAAATGTGAGCTTCCCAAGGTTTCTAAACTATCGCTGTT
1521 GTATATTCTATAGCGTTCCTTATTCTTTGAGGGAAACTGTGCTTGCTGTGATCCATTTTGTCTCTAGCTTCTAGTTGTGA
1601 TTCTTGTCCATAAGCACCAAATTTGATGCCCATGATTTCAAAAGGTCATTTCTTTTATCTGAATGAAAATGGTGGTACTA
1681 AGACTGTGAAAATTATGTGAAACCTAAAGTAGTTGCCAAAGTGGCTCAGGGTTGTAAAATTCATTGACTTAATTATTCAT
1761 GTGCCAGATCAACCCCTTTATTTTCTCTTTAGCTGTGCATATTTAAAATATTGGAAAGTATCAGATTTACAGATTTTCTT
1841 TGACTAATTTTTTTCACATAACTTTAGGATTTTCGAAAGTTGTAACCATAACTGGATATCTTAGCTGAGCAAAGGCGGTT
1921 ATAATTTGTCTTTTTAAGATCACTGGAAATTGATAAAATTTTGTGATAATTATGATTATTCTGTGCCATTTACAGTTTCT
2001 AATACTATACTGTATGAAATATGTATAAATATATGATGCTGAGTCTGTGGAATGATACTTCTGAAATCAAAATTCCTCAT
2081 AAGGCATGAAGTTGTAAAAACTTGAATGTGTATAGTTAGATATTTAAATGGTTGCTTCTTCATAGAATTGTCTGCTTTTT
2161 AAAACTGGAAGTACAGGATTTTCTTCAGGTAAAATCTGTGTGTTCCAATTACAGTTGTAGCTGAAGGAAGTATGCTTTGG
2241 TGAGTCAATTAGTATGGGAACTTGACTAAAGACCCCCAGTGTTGTAACGTACCTTTGTACCCAGACAAAACAATTATGTT
2321 ACATTCCTCAAAGTGGCATGGGCTTTCTTCTCTAATTCTTCTGTTTTATTAGACCCAAGACAAGTTCTAAAAATTGAATG
2401 CAATGAGAGATTGTCCAGAAATGTAATATATACTAAAATATACCACTTAAGCATTGATTGCCTTTTCTTGTTTGCTTCAA
2481 GAATATAAAACTTGTTACTTGAGCTTGGAATCATGGGCTTGATTGAATTAATTACTCTTGGGGAAAAAAGACACCTTGTG
2561 GCATTAAGTCTTGCTTTGGTTAAAGCCTTATTTCACATAATTGCTAAAAACTCATTTTTGTTTAATATACTACCTATAGT
2641 TTAATTATCGGCACTTGTATTTTGTAACTTGATATCTTACCTAGGATTGGGAATTTGGGACATGACATGTACTATAAAAG
2721 TCAGTCTATGTACATACTGCTTATTGATGTGCTGTGATATGAGGGAATCTGAAATGTTTCATAAAAATAAAGCTTAAAAA
2801 TTGTCTTACACTGGATAAAAGTGATATTAAGATATTAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            |||||||||||||||||: 
Target 5' acTGCAGCCTTGACCTCCCGg 3'
385 - 405 179.00 -42.80
2
miRNA  3' ugacGUCGGAACUGGAGGGUc 5'
              || |||  :||||||| 
Target 5' ctccCA-CCTCAGCCTCCCAt 3'
418 - 437 152.00 -16.80
3
miRNA  3' ugacgucggaACU-GGAGGGUc 5'
                    ||| |:||||| 
Target 5' taaagaaatgTGAGCTTCCCAa 3'
1478 - 1499 131.00 -11.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30101230 6 COSMIC
COSN30193308 13 COSMIC
COSN5853187 32 COSMIC
COSN30149418 35 COSMIC
COSN17152996 45 COSMIC
COSN22498389 232 COSMIC
COSN22802120 241 COSMIC
COSN26902714 346 COSMIC
COSN25359569 347 COSMIC
COSN20096124 541 COSMIC
COSN6446861 542 COSMIC
COSN7986863 628 COSMIC
COSN6446860 664 COSMIC
COSN8447745 714 COSMIC
COSN20096122 1040 COSMIC
COSN21703533 1607 COSMIC
COSN30172325 1652 COSMIC
COSN1099640 1699 COSMIC
COSN31602849 1740 COSMIC
COSN31513897 1768 COSMIC
COSN21582282 1838 COSMIC
COSN31556367 1847 COSMIC
COSN32055769 1912 COSMIC
COSN30542480 1914 COSMIC
COSN1435413 2008 COSMIC
COSN15756798 2072 COSMIC
COSN31578723 2091 COSMIC
COSN17076410 2152 COSMIC
COSN20096120 2540 COSMIC
rs11122272 542 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1032401565 1 dbSNP
rs773055842 6 dbSNP
rs769371935 8 dbSNP
rs763609727 10 dbSNP
rs747852523 12 dbSNP
rs955248166 18 dbSNP
rs1322405158 20 dbSNP
rs780520706 26 dbSNP
rs1240552943 29 dbSNP
rs546929222 33 dbSNP
rs1486944963 35 dbSNP
rs1468633859 37 dbSNP
rs374184013 38 dbSNP
rs1183462985 39 dbSNP
rs1474191681 40 dbSNP
rs201213618 42 dbSNP
rs966831230 42 dbSNP
rs568201174 44 dbSNP
rs35468792 46 dbSNP
rs748928986 46 dbSNP
rs962352261 49 dbSNP
rs1016302595 54 dbSNP
rs1156549532 57 dbSNP
rs1273223341 58 dbSNP
rs1346620878 59 dbSNP
rs1400185505 66 dbSNP
rs1299209134 67 dbSNP
rs1006235707 71 dbSNP
rs997768960 73 dbSNP
rs113844165 79 dbSNP
rs1376485458 80 dbSNP
rs894539074 90 dbSNP
rs1223315221 91 dbSNP
rs1442651940 98 dbSNP
rs900788116 102 dbSNP
rs1217544948 108 dbSNP
rs774473531 122 dbSNP
rs539739830 134 dbSNP
rs1469519212 135 dbSNP
rs114215304 139 dbSNP
rs1047495834 140 dbSNP
rs1419997893 143 dbSNP
rs1172625676 150 dbSNP
rs1375269495 154 dbSNP
rs1433221492 155 dbSNP
rs151189159 163 dbSNP
rs370071246 163 dbSNP
rs1360282051 168 dbSNP
rs187751826 168 dbSNP
rs1046015282 176 dbSNP
rs1460109395 201 dbSNP
rs1241233269 202 dbSNP
rs548630586 209 dbSNP
rs1345523658 211 dbSNP
rs1410434985 211 dbSNP
rs1212778073 214 dbSNP
rs1279017463 215 dbSNP
rs1437165661 215 dbSNP
rs531096956 218 dbSNP
rs745845148 224 dbSNP
rs914815684 239 dbSNP
rs1054012109 240 dbSNP
rs1234182762 247 dbSNP
rs1439745273 254 dbSNP
rs112090570 257 dbSNP
rs1469959492 267 dbSNP
rs915823381 270 dbSNP
rs1174685480 273 dbSNP
rs1403287789 275 dbSNP
rs1409954166 277 dbSNP
rs990753020 278 dbSNP
rs111249567 283 dbSNP
rs1325244756 285 dbSNP
rs1369088331 296 dbSNP
rs1253137332 308 dbSNP
rs1212482925 311 dbSNP
rs936692706 312 dbSNP
rs549890719 314 dbSNP
rs867800961 315 dbSNP
rs1275286229 316 dbSNP
rs1338504317 316 dbSNP
rs925309104 319 dbSNP
rs1275006269 321 dbSNP
rs1458120098 321 dbSNP
rs74852749 328 dbSNP
rs1250526346 329 dbSNP
rs1469546634 329 dbSNP
rs79933732 329 dbSNP
rs978134138 329 dbSNP
rs1378642849 333 dbSNP
rs1166711020 335 dbSNP
rs967229540 335 dbSNP
rs1426433186 337 dbSNP
rs1466560788 338 dbSNP
rs910942828 347 dbSNP
rs112748180 350 dbSNP
rs149976318 357 dbSNP
rs1388814763 360 dbSNP
rs1306751869 367 dbSNP
rs1324419250 371 dbSNP
rs955368352 376 dbSNP
rs1428415998 379 dbSNP
rs964955587 380 dbSNP
rs1018284553 392 dbSNP
rs548677216 394 dbSNP
rs1232544607 396 dbSNP
rs1270790335 403 dbSNP
rs1006502991 404 dbSNP
rs1210104746 414 dbSNP
rs1438787440 416 dbSNP
rs918468586 418 dbSNP
rs951681514 419 dbSNP
rs1444870053 420 dbSNP
rs1026022174 421 dbSNP
rs139418927 422 dbSNP
rs993244325 431 dbSNP
rs1346978531 435 dbSNP
rs753638896 436 dbSNP
rs551844805 444 dbSNP
rs1045535614 458 dbSNP
rs1406265313 459 dbSNP
rs973054590 463 dbSNP
rs1384563906 465 dbSNP
rs962625508 467 dbSNP
rs1299823540 470 dbSNP
rs1340884331 471 dbSNP
rs185609384 487 dbSNP
rs1414162499 497 dbSNP
rs1341796402 498 dbSNP
rs1395000516 500 dbSNP
rs1192245874 502 dbSNP
rs1487224095 505 dbSNP
rs894368122 507 dbSNP
rs372061729 508 dbSNP
rs1243308678 511 dbSNP
rs1006196367 514 dbSNP
rs958721708 517 dbSNP
rs1288670961 518 dbSNP
rs1488805324 528 dbSNP
rs1034413537 529 dbSNP
rs1187933368 530 dbSNP
rs1446045423 531 dbSNP
rs1426032477 537 dbSNP
rs1002997436 540 dbSNP
rs935948743 540 dbSNP
rs11122272 542 dbSNP
rs1468852191 542 dbSNP
rs1315639873 543 dbSNP
rs201313695 543 dbSNP
rs201460962 543 dbSNP
rs1310793329 546 dbSNP
rs1010823339 547 dbSNP
rs893365344 551 dbSNP
rs1396467393 552 dbSNP
rs537820933 552 dbSNP
rs945438896 552 dbSNP
rs923356161 556 dbSNP
rs192371240 563 dbSNP
rs1210655816 574 dbSNP
rs976246912 578 dbSNP
rs1484535797 580 dbSNP
rs1201518545 583 dbSNP
rs965226472 584 dbSNP
rs1249994015 586 dbSNP
rs1302599595 589 dbSNP
rs910753912 590 dbSNP
rs1054649729 591 dbSNP
rs1180797147 593 dbSNP
rs942357963 593 dbSNP
rs1453957260 595 dbSNP
rs1171528910 596 dbSNP
rs1379094351 599 dbSNP
rs868389455 600 dbSNP
rs1466540152 602 dbSNP
rs985036080 604 dbSNP
rs1364208085 607 dbSNP
rs1289471585 616 dbSNP
rs1393756690 628 dbSNP
rs75696360 630 dbSNP
rs1331388051 633 dbSNP
rs1050800942 639 dbSNP
rs1358820645 647 dbSNP
rs1299719494 651 dbSNP
rs1314308114 656 dbSNP
rs1315261535 657 dbSNP
rs1025947406 662 dbSNP
rs10489609 664 dbSNP
rs918341568 668 dbSNP
rs972554788 669 dbSNP
rs1468215153 670 dbSNP
rs1189678409 674 dbSNP
rs941202405 679 dbSNP
rs1269281010 697 dbSNP
rs909785547 699 dbSNP
rs1421429212 700 dbSNP
rs1467059035 707 dbSNP
rs971143574 708 dbSNP
rs1393083264 720 dbSNP
rs540256500 725 dbSNP
rs1012691008 729 dbSNP
rs1370237892 730 dbSNP
rs1421089575 741 dbSNP
rs1186564294 757 dbSNP
rs752237706 765 dbSNP
rs1260572761 770 dbSNP
rs1212505991 772 dbSNP
rs1054251427 774 dbSNP
rs1219694166 779 dbSNP
rs1485878723 781 dbSNP
rs1000067424 787 dbSNP
rs990757012 806 dbSNP
rs12121086 807 dbSNP
rs1185719577 808 dbSNP
rs1260696589 816 dbSNP
rs529497632 823 dbSNP
rs1194299264 829 dbSNP
rs1416583153 832 dbSNP
rs958692639 833 dbSNP
rs1166225160 860 dbSNP
rs1350139783 866 dbSNP
rs575368997 871 dbSNP
rs555071748 881 dbSNP
rs868686846 884 dbSNP
rs971465916 902 dbSNP
rs1296433186 906 dbSNP
rs1355330987 912 dbSNP
rs1226714457 922 dbSNP
rs1214054758 923 dbSNP
rs1338788448 928 dbSNP
rs1322567381 939 dbSNP
rs1295356911 946 dbSNP
rs923356275 949 dbSNP
rs1283707413 953 dbSNP
rs1355253111 956 dbSNP
rs1301442180 958 dbSNP
rs1217315254 959 dbSNP
rs1256743518 966 dbSNP
rs1040847548 967 dbSNP
rs1471744948 967 dbSNP
rs1020807477 968 dbSNP
rs910724297 969 dbSNP
rs1359070326 976 dbSNP
rs1421882069 978 dbSNP
rs1170603886 979 dbSNP
rs1010375828 982 dbSNP
rs1359103009 984 dbSNP
rs1446389939 994 dbSNP
rs984960693 1007 dbSNP
rs1464661799 1030 dbSNP
rs561585485 1031 dbSNP
rs1420748989 1032 dbSNP
rs778611135 1034 dbSNP
rs535164911 1037 dbSNP
rs1356065841 1039 dbSNP
rs930848760 1041 dbSNP
rs879939411 1043 dbSNP
rs200228999 1047 dbSNP
rs1440638643 1052 dbSNP
rs971734130 1054 dbSNP
rs971451552 1055 dbSNP
rs755503947 1059 dbSNP
rs1176446396 1071 dbSNP
rs1475301600 1073 dbSNP
rs1033206172 1075 dbSNP
rs1439856992 1086 dbSNP
rs1159643525 1090 dbSNP
rs1424886815 1092 dbSNP
rs372084586 1093 dbSNP
rs572549837 1099 dbSNP
rs1336690161 1107 dbSNP
rs1007137986 1108 dbSNP
rs527405476 1109 dbSNP
rs1329348294 1113 dbSNP
rs1481613310 1118 dbSNP
rs991639979 1120 dbSNP
rs1274085664 1121 dbSNP
rs187517869 1121 dbSNP
rs1220915483 1122 dbSNP
rs1316181756 1123 dbSNP
rs933655222 1124 dbSNP
rs1306797544 1125 dbSNP
rs58263499 1136 dbSNP
rs999990882 1139 dbSNP
rs1457980540 1141 dbSNP
rs903078195 1142 dbSNP
rs1037216541 1145 dbSNP
rs746275692 1146 dbSNP
rs909754197 1147 dbSNP
rs1174631082 1153 dbSNP
rs1311113218 1156 dbSNP
rs1426527183 1158 dbSNP
rs990727705 1159 dbSNP
rs1168637879 1170 dbSNP
rs1402527265 1172 dbSNP
rs1040418160 1179 dbSNP
rs1323105738 1193 dbSNP
rs937877088 1197 dbSNP
rs1329183859 1198 dbSNP
rs1062991 1207 dbSNP
rs927867680 1230 dbSNP
rs1275154422 1235 dbSNP
rs1339778042 1239 dbSNP
rs981442124 1242 dbSNP
rs1317963706 1244 dbSNP
rs889213078 1249 dbSNP
rs1049230598 1252 dbSNP
rs551225342 1256 dbSNP
rs1201466272 1264 dbSNP
rs1020356412 1268 dbSNP
rs1247594530 1270 dbSNP
rs1477811219 1275 dbSNP
rs1192118219 1284 dbSNP
rs1425921827 1285 dbSNP
rs1466187202 1288 dbSNP
rs1475876720 1304 dbSNP
rs1397528098 1305 dbSNP
rs1388883289 1307 dbSNP
rs989325858 1319 dbSNP
rs12116889 1330 dbSNP
rs749243899 1334 dbSNP
rs1339589894 1351 dbSNP
rs564615570 1353 dbSNP
rs930817913 1353 dbSNP
rs780203716 1355 dbSNP
rs919450752 1358 dbSNP
rs972711994 1359 dbSNP
rs950363116 1362 dbSNP
rs1162496654 1366 dbSNP
rs957533192 1378 dbSNP
rs916898372 1379 dbSNP
rs1033176607 1383 dbSNP
rs1250925349 1391 dbSNP
rs1176576053 1396 dbSNP
rs1210048266 1402 dbSNP
rs1215146952 1408 dbSNP
rs1293036850 1408 dbSNP
rs1488148227 1408 dbSNP
rs1007023451 1410 dbSNP
rs991172465 1414 dbSNP
rs537273326 1431 dbSNP
rs1478411092 1432 dbSNP
rs889999490 1439 dbSNP
rs1030347893 1440 dbSNP
rs1366785721 1459 dbSNP
rs958413295 1460 dbSNP
rs1164018721 1463 dbSNP
rs1359722212 1469 dbSNP
rs1417660511 1473 dbSNP
rs1032734335 1481 dbSNP
rs997847468 1483 dbSNP
rs1361096974 1485 dbSNP
rs1395323180 1489 dbSNP
rs1255009931 1494 dbSNP
rs1331692440 1498 dbSNP
rs1341732675 1499 dbSNP
rs1214394186 1506 dbSNP
rs896836327 1512 dbSNP
rs568652526 1514 dbSNP
rs1238469736 1515 dbSNP
rs548739272 1519 dbSNP
rs1486513368 1520 dbSNP
rs1005337932 1523 dbSNP
rs1254219620 1529 dbSNP
rs888205251 1531 dbSNP
rs1054925526 1534 dbSNP
rs1379952598 1535 dbSNP
rs1437995351 1543 dbSNP
rs1160253607 1554 dbSNP
rs937844570 1559 dbSNP
rs927838153 1562 dbSNP
rs528594942 1565 dbSNP
rs950062743 1568 dbSNP
rs566134350 1570 dbSNP
rs116109660 1575 dbSNP
rs1403776987 1580 dbSNP
rs988905237 1584 dbSNP
rs1330040828 1595 dbSNP
rs1374204698 1596 dbSNP
rs1448458159 1599 dbSNP
rs532506311 1601 dbSNP
rs1312005531 1604 dbSNP
rs1317866937 1611 dbSNP
rs1233223767 1612 dbSNP
rs1254790740 1617 dbSNP
rs1347710332 1620 dbSNP
rs957420998 1630 dbSNP
rs926043241 1632 dbSNP
rs564245216 1633 dbSNP
rs544474466 1644 dbSNP
rs1372531646 1645 dbSNP
rs1440982784 1651 dbSNP
rs1456652111 1657 dbSNP
rs1180736937 1667 dbSNP
rs985571488 1685 dbSNP
rs1389312666 1689 dbSNP
rs1173634900 1694 dbSNP
rs774382379 1698 dbSNP
rs1466426609 1704 dbSNP
rs897987641 1713 dbSNP
rs1454980794 1714 dbSNP
rs1029894148 1716 dbSNP
rs1364218657 1717 dbSNP
rs1036571956 1719 dbSNP
rs752046409 1731 dbSNP
rs1157798842 1736 dbSNP
rs1191598398 1742 dbSNP
rs1386597891 1753 dbSNP
rs1299563573 1760 dbSNP
rs768752525 1766 dbSNP
rs1224652281 1769 dbSNP
rs1257576294 1774 dbSNP
rs746874833 1774 dbSNP
rs147946826 1775 dbSNP
rs561540514 1782 dbSNP
rs1252129649 1790 dbSNP
rs1194120885 1794 dbSNP
rs1451117377 1811 dbSNP
rs1265312004 1825 dbSNP
rs1207141050 1837 dbSNP
rs541576246 1840 dbSNP
rs757757361 1842 dbSNP
rs776443122 1852 dbSNP
rs1238424175 1854 dbSNP
rs1192815774 1855 dbSNP
rs1350749983 1855 dbSNP
rs144828021 1865 dbSNP
rs1466753854 1874 dbSNP
rs552616206 1875 dbSNP
rs545500236 1880 dbSNP
rs576748244 1882 dbSNP
rs557400945 1889 dbSNP
rs888172541 1896 dbSNP
rs1348949721 1897 dbSNP
rs1054893713 1900 dbSNP
rs1456012454 1905 dbSNP
rs1292209767 1907 dbSNP
rs1393318448 1908 dbSNP
rs1406131886 1909 dbSNP
rs537737737 1913 dbSNP
rs746771083 1916 dbSNP
rs1339023952 1917 dbSNP
rs1220575616 1922 dbSNP
rs1296300579 1924 dbSNP
rs1002026157 1928 dbSNP
rs753124565 1928 dbSNP
rs1490446129 1930 dbSNP
rs1215565139 1935 dbSNP
rs1298534928 1936 dbSNP
rs1383606233 1938 dbSNP
rs1260982496 1940 dbSNP
rs1478726072 1943 dbSNP
rs1385222625 1945 dbSNP
rs1297416335 1956 dbSNP
rs1186610143 1960 dbSNP
rs777677749 1961 dbSNP
rs1417646736 1963 dbSNP
rs571347790 1963 dbSNP
rs568719763 1971 dbSNP
rs1174221269 1977 dbSNP
rs1387522807 1995 dbSNP
rs1046308089 2001 dbSNP
rs771822636 2008 dbSNP
rs1376041955 2012 dbSNP
rs945321176 2019 dbSNP
rs1195376829 2023 dbSNP
rs1359191114 2025 dbSNP
rs1402335229 2030 dbSNP
rs913828942 2032 dbSNP
rs1262722345 2039 dbSNP
rs1226870373 2044 dbSNP
rs1214648791 2057 dbSNP
rs747837969 2058 dbSNP
rs965645654 2061 dbSNP
rs1239167597 2065 dbSNP
rs936023818 2070 dbSNP
rs1281440994 2071 dbSNP
rs778519507 2078 dbSNP
rs1216409134 2079 dbSNP
rs866693342 2088 dbSNP
rs1481974055 2092 dbSNP
rs1006836494 2102 dbSNP
rs985532030 2110 dbSNP
rs1158432500 2111 dbSNP
rs555206196 2113 dbSNP
rs1378840575 2115 dbSNP
rs1253812126 2120 dbSNP
rs1228962579 2123 dbSNP
rs1326443105 2128 dbSNP
rs953346858 2134 dbSNP
rs1027689602 2135 dbSNP
rs1445955386 2136 dbSNP
rs572122296 2141 dbSNP
rs1446313712 2145 dbSNP
rs993088627 2150 dbSNP
rs1306897569 2155 dbSNP
rs1355551623 2158 dbSNP
rs1277186162 2174 dbSNP
rs1224314942 2175 dbSNP
rs1277854348 2184 dbSNP
rs1310323549 2208 dbSNP
rs754551524 2212 dbSNP
rs1357160553 2216 dbSNP
rs1243156140 2217 dbSNP
rs1313238351 2219 dbSNP
rs1457086454 2225 dbSNP
rs1413877049 2233 dbSNP
rs1399974343 2234 dbSNP
rs1169784253 2246 dbSNP
rs1236775610 2248 dbSNP
rs1471374285 2258 dbSNP
rs954207923 2258 dbSNP
rs922793842 2263 dbSNP
rs1413209113 2266 dbSNP
rs1178751765 2271 dbSNP
rs754306878 2275 dbSNP
rs1465341771 2278 dbSNP
rs1329531896 2284 dbSNP
rs773616114 2288 dbSNP
rs976952372 2289 dbSNP
rs961888485 2290 dbSNP
rs183028638 2300 dbSNP
rs1365421361 2303 dbSNP
rs897911730 2312 dbSNP
rs1263294303 2313 dbSNP
rs140970776 2318 dbSNP
rs1196156905 2324 dbSNP
rs1259626623 2325 dbSNP
rs1437984018 2326 dbSNP
rs1014435339 2337 dbSNP
rs559471880 2341 dbSNP
rs1055952111 2343 dbSNP
rs368410686 2350 dbSNP
rs532428987 2352 dbSNP
rs570017627 2353 dbSNP
rs1275739253 2358 dbSNP
rs2064766 2361 dbSNP
rs1042708082 2364 dbSNP
rs1398909442 2366 dbSNP
rs1410686431 2368 dbSNP
rs574289661 2370 dbSNP
rs1025196640 2375 dbSNP
rs1347896177 2377 dbSNP
rs1406739343 2384 dbSNP
rs1283823689 2393 dbSNP
rs912997061 2395 dbSNP
rs530715577 2399 dbSNP
rs1336448847 2405 dbSNP
rs761982503 2411 dbSNP
rs1053645553 2427 dbSNP
rs1208869190 2427 dbSNP
rs1289671744 2428 dbSNP
rs561607403 2429 dbSNP
rs1338419784 2440 dbSNP
rs1225117610 2442 dbSNP
rs935983042 2450 dbSNP
rs1488210293 2460 dbSNP
rs1191610426 2466 dbSNP
rs1374850341 2467 dbSNP
rs1475901994 2474 dbSNP
rs1162858307 2489 dbSNP
rs1391854610 2492 dbSNP
rs985365748 2499 dbSNP
rs1303462763 2512 dbSNP
rs952646009 2513 dbSNP
rs1398056505 2514 dbSNP
rs1319799877 2516 dbSNP
rs1326477657 2519 dbSNP
rs1243681507 2523 dbSNP
rs1027617441 2531 dbSNP
rs994847770 2532 dbSNP
rs962407326 2533 dbSNP
rs1168587381 2535 dbSNP
rs541233950 2541 dbSNP
rs1418837859 2542 dbSNP
rs201033642 2543 dbSNP
rs1353690908 2544 dbSNP
rs34102991 2544 dbSNP
rs774412641 2544 dbSNP
rs1203891278 2549 dbSNP
rs1014776498 2554 dbSNP
rs1049791410 2556 dbSNP
rs1447632910 2556 dbSNP
rs1235951591 2563 dbSNP
rs1446610805 2568 dbSNP
rs932692288 2571 dbSNP
rs895971050 2582 dbSNP
rs372785133 2597 dbSNP
rs1162834974 2624 dbSNP
rs922713284 2625 dbSNP
rs1472017463 2627 dbSNP
rs1001703399 2636 dbSNP
rs528243560 2640 dbSNP
rs1234920499 2649 dbSNP
rs2053165 2650 dbSNP
rs940216207 2659 dbSNP
rs1457694674 2669 dbSNP
rs532780701 2672 dbSNP
rs764101876 2680 dbSNP
rs952355606 2681 dbSNP
rs1263039476 2685 dbSNP
rs762943964 2690 dbSNP
rs1237074001 2697 dbSNP
rs1196201889 2698 dbSNP
rs1469580796 2706 dbSNP
rs953 2708 dbSNP
rs1227313876 2709 dbSNP
rs1354028147 2713 dbSNP
rs1462874827 2716 dbSNP
rs1184405622 2717 dbSNP
rs1437614353 2718 dbSNP
rs774337786 2728 dbSNP
rs980442431 2729 dbSNP
rs1364319564 2730 dbSNP
rs1465436088 2737 dbSNP
rs970846888 2745 dbSNP
rs1024746221 2747 dbSNP
rs1240842377 2749 dbSNP
rs891479114 2751 dbSNP
rs1330243193 2752 dbSNP
rs1009788684 2753 dbSNP
rs1390059269 2761 dbSNP
rs747883803 2768 dbSNP
rs1336930432 2774 dbSNP
rs1040787543 2779 dbSNP
rs1329464120 2781 dbSNP
rs1281496879 2784 dbSNP
rs1325727278 2790 dbSNP
rs943820641 2792 dbSNP
rs892330756 2793 dbSNP
rs1032216149 2801 dbSNP
rs1443219894 2802 dbSNP
rs1395226223 2805 dbSNP
rs1197355695 2812 dbSNP
rs1250959133 2813 dbSNP
rs116572716 2815 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545214. RNA binding protein: AGO3. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugacgucggaacuGGAGGGUc 5'
                       ||||||| 
Target 5' -------------CCUCCCAu 3'
1 - 8
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545214
Method / RBP PAR-CLIP / AGO3
Cell line / Condition HEK293 / Control
Location of target site ENST00000360394.2 | 3UTR | CCUCCCAUGUAGCAGGAAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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