pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol EXOC8   
Synonyms EXO84, Exo84p, SEC84
Description exocyst complex component 8
Transcript NM_175876   
Expression
Putative miRNA Targets on EXOC8
3'UTR of EXOC8
(miRNA target sites are highlighted)
>EXOC8|NM_175876|3'UTR
   1 TGCTTGGGTCTGTTTATATGTGTATATATGCAGAGAGAGAGCTTATATATTATTTATATTTATATTAAGTTGTATTAGCA
  81 TACTCTATAGTTTCAAACACAACTTGAAAATTAAAAGTGCCCTCTTAAAAATACAAAAATCAAAAAGAGGAAAATAAGTT
 161 AAATTAAGCCCAAGTAACAAAAATACTGGAATTATTAAAACGTATAGTATGCTAGCTATCCTTTTAAATTATGCTAATTC
 241 TCTTCTTCTGAAATTATGGTCACACTATATACTATAGCATTTCGGTTTTATCCTTTGATAAAACTTTTCTTTTTTCTTTT
 321 TTTTTTTTGAGACAGGGTCTCACCCCGTCGCACAGGCTGGAGTGCAGTGGCAAAGTCTCGACTCACTGCAGCCTTGACCT
 401 CCCGGGCCCAGGTAGTCCTCCCACCTCAGCCTCCCATGTAGCAGGAACCACAGGCAGGCACCACCATACCCAGCTAATTT
 481 TTGTATTTTTTGTAGAGATGGGGTTTCGCCATGTTGCCCAGGCTAGTCTTTTCTTTCTTCTTTTTTTTTTTCCCCACAGT
 561 ATATATTATACAGCAGTCATAATATCTATAAATACATAGAGTTTATGTTGTGAAGTTTCCCAGTTCACTGAAATGTTAGG
 641 TTTCCTAAAGGGTACAGTGCCGTATAAAACAACCTGCCTCATATATTTCTCCTCAAAACGTTGGACTATTTGGGAAAAGG
 721 AAAAGAGTTGGGAAAATTGGTTTTAAGGTAAGTTTTAGTCAAAAGAATTCTTTCTTGAAACTAGCTGGTTTGTGGATTCA
 801 GATACTCTGATCCTTACAGAATCCAAGAGGAAGCTTTCATAAAAACAATTCAGCAAATATTTCCAATATAATTTGAATGG
 881 CTAATTTTCAGTTGCTAATTAATTAGCAGCTTTGTAATACTTGATTTGGGAGCATTTACTTGGAAATCCTAAGGACTATA
 961 ATAAAAGTTTTCAACATATTTCTAAATTGTGTGAGTTTCCAGCTGTAGCTTTTGTCTTTGTCACATTTTAAAAAATAATA
1041 AGCAAGACACATTGGGGACACTGGCAGCAGTTGCCAGGTTTTAGCTGCCACCGCTTCAGTATGAGATATAGCTGTCCCAT
1121 CTTCCCCCATTCAGGGTAGGAGATATAGTGACCCAGACTTCATGCAAATGGAAAAAAAGTTTTAACTGAAATATTTATTT
1201 AGATTTCAGGGTCTAGATGGATGGGAAAGTAGAAAAACATATGCAAATCTCAGTGTTCTCACTATGACCACTCTGAGCAG
1281 AGATTTGGTTTTGTTTCCTTTTGTAACAAAGTGAAAACAGGTGAGACAATGTGCCCAAAACAAAGGGAAGAAGAGAACCT
1361 TCTGTGACTCCTAAAATGTTCCATGCTGCATTTTTGTTTCATTTTTTATTTTTCCTTGCTTTGTTTTTAAACATGAATAT
1441 AATGCTTACTTCAAATTGTTTAGTAAAACAAAATAACTAAAGAAATGTGAGCTTCCCAAGGTTTCTAAACTATCGCTGTT
1521 GTATATTCTATAGCGTTCCTTATTCTTTGAGGGAAACTGTGCTTGCTGTGATCCATTTTGTCTCTAGCTTCTAGTTGTGA
1601 TTCTTGTCCATAAGCACCAAATTTGATGCCCATGATTTCAAAAGGTCATTTCTTTTATCTGAATGAAAATGGTGGTACTA
1681 AGACTGTGAAAATTATGTGAAACCTAAAGTAGTTGCCAAAGTGGCTCAGGGTTGTAAAATTCATTGACTTAATTATTCAT
1761 GTGCCAGATCAACCCCTTTATTTTCTCTTTAGCTGTGCATATTTAAAATATTGGAAAGTATCAGATTTACAGATTTTCTT
1841 TGACTAATTTTTTTCACATAACTTTAGGATTTTCGAAAGTTGTAACCATAACTGGATATCTTAGCTGAGCAAAGGCGGTT
1921 ATAATTTGTCTTTTTAAGATCACTGGAAATTGATAAAATTTTGTGATAATTATGATTATTCTGTGCCATTTACAGTTTCT
2001 AATACTATACTGTATGAAATATGTATAAATATATGATGCTGAGTCTGTGGAATGATACTTCTGAAATCAAAATTCCTCAT
2081 AAGGCATGAAGTTGTAAAAACTTGAATGTGTATAGTTAGATATTTAAATGGTTGCTTCTTCATAGAATTGTCTGCTTTTT
2161 AAAACTGGAAGTACAGGATTTTCTTCAGGTAAAATCTGTGTGTTCCAATTACAGTTGTAGCTGAAGGAAGTATGCTTTGG
2241 TGAGTCAATTAGTATGGGAACTTGACTAAAGACCCCCAGTGTTGTAACGTACCTTTGTACCCAGACAAAACAATTATGTT
2321 ACATTCCTCAAAGTGGCATGGGCTTTCTTCTCTAATTCTTCTGTTTTATTAGACCCAAGACAAGTTCTAAAAATTGAATG
2401 CAATGAGAGATTGTCCAGAAATGTAATATATACTAAAATATACCACTTAAGCATTGATTGCCTTTTCTTGTTTGCTTCAA
2481 GAATATAAAACTTGTTACTTGAGCTTGGAATCATGGGCTTGATTGAATTAATTACTCTTGGGGAAAAAAGACACCTTGTG
2561 GCATTAAGTCTTGCTTTGGTTAAAGCCTTATTTCACATAATTGCTAAAAACTCATTTTTGTTTAATATACTACCTATAGT
2641 TTAATTATCGGCACTTGTATTTTGTAACTTGATATCTTACCTAGGATTGGGAATTTGGGACATGACATGTACTATAAAAG
2721 TCAGTCTATGTACATACTGCTTATTGATGTGCTGTGATATGAGGGAATCTGAAATGTTTCATAAAAATAAAGCTTAAAAA
2801 TTGTCTTACACTGGATAAAAGTGATATTAAGATATTAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggUAGAAG---GAAGUCGGAg 5'
            :|| ||   | ||||||| 
Target 5' taGTCCTCCCACCTCAGCCTc 3'
413 - 433 148.00 -17.90
2
miRNA  3' gguagaaggaAGUCGGAg 5'
                    ||||:|| 
Target 5' actataaaagTCAGTCTa 3'
2711 - 2728 124.00 -10.90
3
miRNA  3' gguaGAAGGAAGUCGGAg 5'
              ||  || |||||| 
Target 5' tcgaCTCACTGCAGCCTt 3'
378 - 395 122.00 -13.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30101230 6 COSMIC
COSN30193308 13 COSMIC
COSN5853187 32 COSMIC
COSN30149418 35 COSMIC
COSN17152996 45 COSMIC
COSN22498389 232 COSMIC
COSN22802120 241 COSMIC
COSN26902714 346 COSMIC
COSN25359569 347 COSMIC
COSN20096124 541 COSMIC
COSN6446861 542 COSMIC
COSN7986863 628 COSMIC
COSN6446860 664 COSMIC
COSN8447745 714 COSMIC
COSN20096122 1040 COSMIC
COSN21703533 1607 COSMIC
COSN30172325 1652 COSMIC
COSN1099640 1699 COSMIC
COSN31602849 1740 COSMIC
COSN31513897 1768 COSMIC
COSN21582282 1838 COSMIC
COSN31556367 1847 COSMIC
COSN32055769 1912 COSMIC
COSN30542480 1914 COSMIC
COSN1435413 2008 COSMIC
COSN15756798 2072 COSMIC
COSN31578723 2091 COSMIC
COSN17076410 2152 COSMIC
COSN20096120 2540 COSMIC
rs11122272 542 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1032401565 1 dbSNP
rs773055842 6 dbSNP
rs769371935 8 dbSNP
rs763609727 10 dbSNP
rs747852523 12 dbSNP
rs955248166 18 dbSNP
rs1322405158 20 dbSNP
rs780520706 26 dbSNP
rs1240552943 29 dbSNP
rs546929222 33 dbSNP
rs1486944963 35 dbSNP
rs1468633859 37 dbSNP
rs374184013 38 dbSNP
rs1183462985 39 dbSNP
rs1474191681 40 dbSNP
rs201213618 42 dbSNP
rs966831230 42 dbSNP
rs568201174 44 dbSNP
rs35468792 46 dbSNP
rs748928986 46 dbSNP
rs962352261 49 dbSNP
rs1016302595 54 dbSNP
rs1156549532 57 dbSNP
rs1273223341 58 dbSNP
rs1346620878 59 dbSNP
rs1400185505 66 dbSNP
rs1299209134 67 dbSNP
rs1006235707 71 dbSNP
rs997768960 73 dbSNP
rs113844165 79 dbSNP
rs1376485458 80 dbSNP
rs894539074 90 dbSNP
rs1223315221 91 dbSNP
rs1442651940 98 dbSNP
rs900788116 102 dbSNP
rs1217544948 108 dbSNP
rs774473531 122 dbSNP
rs539739830 134 dbSNP
rs1469519212 135 dbSNP
rs114215304 139 dbSNP
rs1047495834 140 dbSNP
rs1419997893 143 dbSNP
rs1172625676 150 dbSNP
rs1375269495 154 dbSNP
rs1433221492 155 dbSNP
rs151189159 163 dbSNP
rs370071246 163 dbSNP
rs1360282051 168 dbSNP
rs187751826 168 dbSNP
rs1046015282 176 dbSNP
rs1460109395 201 dbSNP
rs1241233269 202 dbSNP
rs548630586 209 dbSNP
rs1345523658 211 dbSNP
rs1410434985 211 dbSNP
rs1212778073 214 dbSNP
rs1279017463 215 dbSNP
rs1437165661 215 dbSNP
rs531096956 218 dbSNP
rs745845148 224 dbSNP
rs914815684 239 dbSNP
rs1054012109 240 dbSNP
rs1234182762 247 dbSNP
rs1439745273 254 dbSNP
rs112090570 257 dbSNP
rs1469959492 267 dbSNP
rs915823381 270 dbSNP
rs1174685480 273 dbSNP
rs1403287789 275 dbSNP
rs1409954166 277 dbSNP
rs990753020 278 dbSNP
rs111249567 283 dbSNP
rs1325244756 285 dbSNP
rs1369088331 296 dbSNP
rs1253137332 308 dbSNP
rs1212482925 311 dbSNP
rs936692706 312 dbSNP
rs549890719 314 dbSNP
rs867800961 315 dbSNP
rs1275286229 316 dbSNP
rs1338504317 316 dbSNP
rs925309104 319 dbSNP
rs1275006269 321 dbSNP
rs1458120098 321 dbSNP
rs74852749 328 dbSNP
rs1250526346 329 dbSNP
rs1469546634 329 dbSNP
rs79933732 329 dbSNP
rs978134138 329 dbSNP
rs1378642849 333 dbSNP
rs1166711020 335 dbSNP
rs967229540 335 dbSNP
rs1426433186 337 dbSNP
rs1466560788 338 dbSNP
rs910942828 347 dbSNP
rs112748180 350 dbSNP
rs149976318 357 dbSNP
rs1388814763 360 dbSNP
rs1306751869 367 dbSNP
rs1324419250 371 dbSNP
rs955368352 376 dbSNP
rs1428415998 379 dbSNP
rs964955587 380 dbSNP
rs1018284553 392 dbSNP
rs548677216 394 dbSNP
rs1232544607 396 dbSNP
rs1270790335 403 dbSNP
rs1006502991 404 dbSNP
rs1210104746 414 dbSNP
rs1438787440 416 dbSNP
rs918468586 418 dbSNP
rs951681514 419 dbSNP
rs1444870053 420 dbSNP
rs1026022174 421 dbSNP
rs139418927 422 dbSNP
rs993244325 431 dbSNP
rs1346978531 435 dbSNP
rs753638896 436 dbSNP
rs551844805 444 dbSNP
rs1045535614 458 dbSNP
rs1406265313 459 dbSNP
rs973054590 463 dbSNP
rs1384563906 465 dbSNP
rs962625508 467 dbSNP
rs1299823540 470 dbSNP
rs1340884331 471 dbSNP
rs185609384 487 dbSNP
rs1414162499 497 dbSNP
rs1341796402 498 dbSNP
rs1395000516 500 dbSNP
rs1192245874 502 dbSNP
rs1487224095 505 dbSNP
rs894368122 507 dbSNP
rs372061729 508 dbSNP
rs1243308678 511 dbSNP
rs1006196367 514 dbSNP
rs958721708 517 dbSNP
rs1288670961 518 dbSNP
rs1488805324 528 dbSNP
rs1034413537 529 dbSNP
rs1187933368 530 dbSNP
rs1446045423 531 dbSNP
rs1426032477 537 dbSNP
rs1002997436 540 dbSNP
rs935948743 540 dbSNP
rs11122272 542 dbSNP
rs1468852191 542 dbSNP
rs1315639873 543 dbSNP
rs201313695 543 dbSNP
rs201460962 543 dbSNP
rs1310793329 546 dbSNP
rs1010823339 547 dbSNP
rs893365344 551 dbSNP
rs1396467393 552 dbSNP
rs537820933 552 dbSNP
rs945438896 552 dbSNP
rs923356161 556 dbSNP
rs192371240 563 dbSNP
rs1210655816 574 dbSNP
rs976246912 578 dbSNP
rs1484535797 580 dbSNP
rs1201518545 583 dbSNP
rs965226472 584 dbSNP
rs1249994015 586 dbSNP
rs1302599595 589 dbSNP
rs910753912 590 dbSNP
rs1054649729 591 dbSNP
rs1180797147 593 dbSNP
rs942357963 593 dbSNP
rs1453957260 595 dbSNP
rs1171528910 596 dbSNP
rs1379094351 599 dbSNP
rs868389455 600 dbSNP
rs1466540152 602 dbSNP
rs985036080 604 dbSNP
rs1364208085 607 dbSNP
rs1289471585 616 dbSNP
rs1393756690 628 dbSNP
rs75696360 630 dbSNP
rs1331388051 633 dbSNP
rs1050800942 639 dbSNP
rs1358820645 647 dbSNP
rs1299719494 651 dbSNP
rs1314308114 656 dbSNP
rs1315261535 657 dbSNP
rs1025947406 662 dbSNP
rs10489609 664 dbSNP
rs918341568 668 dbSNP
rs972554788 669 dbSNP
rs1468215153 670 dbSNP
rs1189678409 674 dbSNP
rs941202405 679 dbSNP
rs1269281010 697 dbSNP
rs909785547 699 dbSNP
rs1421429212 700 dbSNP
rs1467059035 707 dbSNP
rs971143574 708 dbSNP
rs1393083264 720 dbSNP
rs540256500 725 dbSNP
rs1012691008 729 dbSNP
rs1370237892 730 dbSNP
rs1421089575 741 dbSNP
rs1186564294 757 dbSNP
rs752237706 765 dbSNP
rs1260572761 770 dbSNP
rs1212505991 772 dbSNP
rs1054251427 774 dbSNP
rs1219694166 779 dbSNP
rs1485878723 781 dbSNP
rs1000067424 787 dbSNP
rs990757012 806 dbSNP
rs12121086 807 dbSNP
rs1185719577 808 dbSNP
rs1260696589 816 dbSNP
rs529497632 823 dbSNP
rs1194299264 829 dbSNP
rs1416583153 832 dbSNP
rs958692639 833 dbSNP
rs1166225160 860 dbSNP
rs1350139783 866 dbSNP
rs575368997 871 dbSNP
rs555071748 881 dbSNP
rs868686846 884 dbSNP
rs971465916 902 dbSNP
rs1296433186 906 dbSNP
rs1355330987 912 dbSNP
rs1226714457 922 dbSNP
rs1214054758 923 dbSNP
rs1338788448 928 dbSNP
rs1322567381 939 dbSNP
rs1295356911 946 dbSNP
rs923356275 949 dbSNP
rs1283707413 953 dbSNP
rs1355253111 956 dbSNP
rs1301442180 958 dbSNP
rs1217315254 959 dbSNP
rs1256743518 966 dbSNP
rs1040847548 967 dbSNP
rs1471744948 967 dbSNP
rs1020807477 968 dbSNP
rs910724297 969 dbSNP
rs1359070326 976 dbSNP
rs1421882069 978 dbSNP
rs1170603886 979 dbSNP
rs1010375828 982 dbSNP
rs1359103009 984 dbSNP
rs1446389939 994 dbSNP
rs984960693 1007 dbSNP
rs1464661799 1030 dbSNP
rs561585485 1031 dbSNP
rs1420748989 1032 dbSNP
rs778611135 1034 dbSNP
rs535164911 1037 dbSNP
rs1356065841 1039 dbSNP
rs930848760 1041 dbSNP
rs879939411 1043 dbSNP
rs200228999 1047 dbSNP
rs1440638643 1052 dbSNP
rs971734130 1054 dbSNP
rs971451552 1055 dbSNP
rs755503947 1059 dbSNP
rs1176446396 1071 dbSNP
rs1475301600 1073 dbSNP
rs1033206172 1075 dbSNP
rs1439856992 1086 dbSNP
rs1159643525 1090 dbSNP
rs1424886815 1092 dbSNP
rs372084586 1093 dbSNP
rs572549837 1099 dbSNP
rs1336690161 1107 dbSNP
rs1007137986 1108 dbSNP
rs527405476 1109 dbSNP
rs1329348294 1113 dbSNP
rs1481613310 1118 dbSNP
rs991639979 1120 dbSNP
rs1274085664 1121 dbSNP
rs187517869 1121 dbSNP
rs1220915483 1122 dbSNP
rs1316181756 1123 dbSNP
rs933655222 1124 dbSNP
rs1306797544 1125 dbSNP
rs58263499 1136 dbSNP
rs999990882 1139 dbSNP
rs1457980540 1141 dbSNP
rs903078195 1142 dbSNP
rs1037216541 1145 dbSNP
rs746275692 1146 dbSNP
rs909754197 1147 dbSNP
rs1174631082 1153 dbSNP
rs1311113218 1156 dbSNP
rs1426527183 1158 dbSNP
rs990727705 1159 dbSNP
rs1168637879 1170 dbSNP
rs1402527265 1172 dbSNP
rs1040418160 1179 dbSNP
rs1323105738 1193 dbSNP
rs937877088 1197 dbSNP
rs1329183859 1198 dbSNP
rs1062991 1207 dbSNP
rs927867680 1230 dbSNP
rs1275154422 1235 dbSNP
rs1339778042 1239 dbSNP
rs981442124 1242 dbSNP
rs1317963706 1244 dbSNP
rs889213078 1249 dbSNP
rs1049230598 1252 dbSNP
rs551225342 1256 dbSNP
rs1201466272 1264 dbSNP
rs1020356412 1268 dbSNP
rs1247594530 1270 dbSNP
rs1477811219 1275 dbSNP
rs1192118219 1284 dbSNP
rs1425921827 1285 dbSNP
rs1466187202 1288 dbSNP
rs1475876720 1304 dbSNP
rs1397528098 1305 dbSNP
rs1388883289 1307 dbSNP
rs989325858 1319 dbSNP
rs12116889 1330 dbSNP
rs749243899 1334 dbSNP
rs1339589894 1351 dbSNP
rs564615570 1353 dbSNP
rs930817913 1353 dbSNP
rs780203716 1355 dbSNP
rs919450752 1358 dbSNP
rs972711994 1359 dbSNP
rs950363116 1362 dbSNP
rs1162496654 1366 dbSNP
rs957533192 1378 dbSNP
rs916898372 1379 dbSNP
rs1033176607 1383 dbSNP
rs1250925349 1391 dbSNP
rs1176576053 1396 dbSNP
rs1210048266 1402 dbSNP
rs1215146952 1408 dbSNP
rs1293036850 1408 dbSNP
rs1488148227 1408 dbSNP
rs1007023451 1410 dbSNP
rs991172465 1414 dbSNP
rs537273326 1431 dbSNP
rs1478411092 1432 dbSNP
rs889999490 1439 dbSNP
rs1030347893 1440 dbSNP
rs1366785721 1459 dbSNP
rs958413295 1460 dbSNP
rs1164018721 1463 dbSNP
rs1359722212 1469 dbSNP
rs1417660511 1473 dbSNP
rs1032734335 1481 dbSNP
rs997847468 1483 dbSNP
rs1361096974 1485 dbSNP
rs1395323180 1489 dbSNP
rs1255009931 1494 dbSNP
rs1331692440 1498 dbSNP
rs1341732675 1499 dbSNP
rs1214394186 1506 dbSNP
rs896836327 1512 dbSNP
rs568652526 1514 dbSNP
rs1238469736 1515 dbSNP
rs548739272 1519 dbSNP
rs1486513368 1520 dbSNP
rs1005337932 1523 dbSNP
rs1254219620 1529 dbSNP
rs888205251 1531 dbSNP
rs1054925526 1534 dbSNP
rs1379952598 1535 dbSNP
rs1437995351 1543 dbSNP
rs1160253607 1554 dbSNP
rs937844570 1559 dbSNP
rs927838153 1562 dbSNP
rs528594942 1565 dbSNP
rs950062743 1568 dbSNP
rs566134350 1570 dbSNP
rs116109660 1575 dbSNP
rs1403776987 1580 dbSNP
rs988905237 1584 dbSNP
rs1330040828 1595 dbSNP
rs1374204698 1596 dbSNP
rs1448458159 1599 dbSNP
rs532506311 1601 dbSNP
rs1312005531 1604 dbSNP
rs1317866937 1611 dbSNP
rs1233223767 1612 dbSNP
rs1254790740 1617 dbSNP
rs1347710332 1620 dbSNP
rs957420998 1630 dbSNP
rs926043241 1632 dbSNP
rs564245216 1633 dbSNP
rs544474466 1644 dbSNP
rs1372531646 1645 dbSNP
rs1440982784 1651 dbSNP
rs1456652111 1657 dbSNP
rs1180736937 1667 dbSNP
rs985571488 1685 dbSNP
rs1389312666 1689 dbSNP
rs1173634900 1694 dbSNP
rs774382379 1698 dbSNP
rs1466426609 1704 dbSNP
rs897987641 1713 dbSNP
rs1454980794 1714 dbSNP
rs1029894148 1716 dbSNP
rs1364218657 1717 dbSNP
rs1036571956 1719 dbSNP
rs752046409 1731 dbSNP
rs1157798842 1736 dbSNP
rs1191598398 1742 dbSNP
rs1386597891 1753 dbSNP
rs1299563573 1760 dbSNP
rs768752525 1766 dbSNP
rs1224652281 1769 dbSNP
rs1257576294 1774 dbSNP
rs746874833 1774 dbSNP
rs147946826 1775 dbSNP
rs561540514 1782 dbSNP
rs1252129649 1790 dbSNP
rs1194120885 1794 dbSNP
rs1451117377 1811 dbSNP
rs1265312004 1825 dbSNP
rs1207141050 1837 dbSNP
rs541576246 1840 dbSNP
rs757757361 1842 dbSNP
rs776443122 1852 dbSNP
rs1238424175 1854 dbSNP
rs1192815774 1855 dbSNP
rs1350749983 1855 dbSNP
rs144828021 1865 dbSNP
rs1466753854 1874 dbSNP
rs552616206 1875 dbSNP
rs545500236 1880 dbSNP
rs576748244 1882 dbSNP
rs557400945 1889 dbSNP
rs888172541 1896 dbSNP
rs1348949721 1897 dbSNP
rs1054893713 1900 dbSNP
rs1456012454 1905 dbSNP
rs1292209767 1907 dbSNP
rs1393318448 1908 dbSNP
rs1406131886 1909 dbSNP
rs537737737 1913 dbSNP
rs746771083 1916 dbSNP
rs1339023952 1917 dbSNP
rs1220575616 1922 dbSNP
rs1296300579 1924 dbSNP
rs1002026157 1928 dbSNP
rs753124565 1928 dbSNP
rs1490446129 1930 dbSNP
rs1215565139 1935 dbSNP
rs1298534928 1936 dbSNP
rs1383606233 1938 dbSNP
rs1260982496 1940 dbSNP
rs1478726072 1943 dbSNP
rs1385222625 1945 dbSNP
rs1297416335 1956 dbSNP
rs1186610143 1960 dbSNP
rs777677749 1961 dbSNP
rs1417646736 1963 dbSNP
rs571347790 1963 dbSNP
rs568719763 1971 dbSNP
rs1174221269 1977 dbSNP
rs1387522807 1995 dbSNP
rs1046308089 2001 dbSNP
rs771822636 2008 dbSNP
rs1376041955 2012 dbSNP
rs945321176 2019 dbSNP
rs1195376829 2023 dbSNP
rs1359191114 2025 dbSNP
rs1402335229 2030 dbSNP
rs913828942 2032 dbSNP
rs1262722345 2039 dbSNP
rs1226870373 2044 dbSNP
rs1214648791 2057 dbSNP
rs747837969 2058 dbSNP
rs965645654 2061 dbSNP
rs1239167597 2065 dbSNP
rs936023818 2070 dbSNP
rs1281440994 2071 dbSNP
rs778519507 2078 dbSNP
rs1216409134 2079 dbSNP
rs866693342 2088 dbSNP
rs1481974055 2092 dbSNP
rs1006836494 2102 dbSNP
rs985532030 2110 dbSNP
rs1158432500 2111 dbSNP
rs555206196 2113 dbSNP
rs1378840575 2115 dbSNP
rs1253812126 2120 dbSNP
rs1228962579 2123 dbSNP
rs1326443105 2128 dbSNP
rs953346858 2134 dbSNP
rs1027689602 2135 dbSNP
rs1445955386 2136 dbSNP
rs572122296 2141 dbSNP
rs1446313712 2145 dbSNP
rs993088627 2150 dbSNP
rs1306897569 2155 dbSNP
rs1355551623 2158 dbSNP
rs1277186162 2174 dbSNP
rs1224314942 2175 dbSNP
rs1277854348 2184 dbSNP
rs1310323549 2208 dbSNP
rs754551524 2212 dbSNP
rs1357160553 2216 dbSNP
rs1243156140 2217 dbSNP
rs1313238351 2219 dbSNP
rs1457086454 2225 dbSNP
rs1413877049 2233 dbSNP
rs1399974343 2234 dbSNP
rs1169784253 2246 dbSNP
rs1236775610 2248 dbSNP
rs1471374285 2258 dbSNP
rs954207923 2258 dbSNP
rs922793842 2263 dbSNP
rs1413209113 2266 dbSNP
rs1178751765 2271 dbSNP
rs754306878 2275 dbSNP
rs1465341771 2278 dbSNP
rs1329531896 2284 dbSNP
rs773616114 2288 dbSNP
rs976952372 2289 dbSNP
rs961888485 2290 dbSNP
rs183028638 2300 dbSNP
rs1365421361 2303 dbSNP
rs897911730 2312 dbSNP
rs1263294303 2313 dbSNP
rs140970776 2318 dbSNP
rs1196156905 2324 dbSNP
rs1259626623 2325 dbSNP
rs1437984018 2326 dbSNP
rs1014435339 2337 dbSNP
rs559471880 2341 dbSNP
rs1055952111 2343 dbSNP
rs368410686 2350 dbSNP
rs532428987 2352 dbSNP
rs570017627 2353 dbSNP
rs1275739253 2358 dbSNP
rs2064766 2361 dbSNP
rs1042708082 2364 dbSNP
rs1398909442 2366 dbSNP
rs1410686431 2368 dbSNP
rs574289661 2370 dbSNP
rs1025196640 2375 dbSNP
rs1347896177 2377 dbSNP
rs1406739343 2384 dbSNP
rs1283823689 2393 dbSNP
rs912997061 2395 dbSNP
rs530715577 2399 dbSNP
rs1336448847 2405 dbSNP
rs761982503 2411 dbSNP
rs1053645553 2427 dbSNP
rs1208869190 2427 dbSNP
rs1289671744 2428 dbSNP
rs561607403 2429 dbSNP
rs1338419784 2440 dbSNP
rs1225117610 2442 dbSNP
rs935983042 2450 dbSNP
rs1488210293 2460 dbSNP
rs1191610426 2466 dbSNP
rs1374850341 2467 dbSNP
rs1475901994 2474 dbSNP
rs1162858307 2489 dbSNP
rs1391854610 2492 dbSNP
rs985365748 2499 dbSNP
rs1303462763 2512 dbSNP
rs952646009 2513 dbSNP
rs1398056505 2514 dbSNP
rs1319799877 2516 dbSNP
rs1326477657 2519 dbSNP
rs1243681507 2523 dbSNP
rs1027617441 2531 dbSNP
rs994847770 2532 dbSNP
rs962407326 2533 dbSNP
rs1168587381 2535 dbSNP
rs541233950 2541 dbSNP
rs1418837859 2542 dbSNP
rs201033642 2543 dbSNP
rs1353690908 2544 dbSNP
rs34102991 2544 dbSNP
rs774412641 2544 dbSNP
rs1203891278 2549 dbSNP
rs1014776498 2554 dbSNP
rs1049791410 2556 dbSNP
rs1447632910 2556 dbSNP
rs1235951591 2563 dbSNP
rs1446610805 2568 dbSNP
rs932692288 2571 dbSNP
rs895971050 2582 dbSNP
rs372785133 2597 dbSNP
rs1162834974 2624 dbSNP
rs922713284 2625 dbSNP
rs1472017463 2627 dbSNP
rs1001703399 2636 dbSNP
rs528243560 2640 dbSNP
rs1234920499 2649 dbSNP
rs2053165 2650 dbSNP
rs940216207 2659 dbSNP
rs1457694674 2669 dbSNP
rs532780701 2672 dbSNP
rs764101876 2680 dbSNP
rs952355606 2681 dbSNP
rs1263039476 2685 dbSNP
rs762943964 2690 dbSNP
rs1237074001 2697 dbSNP
rs1196201889 2698 dbSNP
rs1469580796 2706 dbSNP
rs953 2708 dbSNP
rs1227313876 2709 dbSNP
rs1354028147 2713 dbSNP
rs1462874827 2716 dbSNP
rs1184405622 2717 dbSNP
rs1437614353 2718 dbSNP
rs774337786 2728 dbSNP
rs980442431 2729 dbSNP
rs1364319564 2730 dbSNP
rs1465436088 2737 dbSNP
rs970846888 2745 dbSNP
rs1024746221 2747 dbSNP
rs1240842377 2749 dbSNP
rs891479114 2751 dbSNP
rs1330243193 2752 dbSNP
rs1009788684 2753 dbSNP
rs1390059269 2761 dbSNP
rs747883803 2768 dbSNP
rs1336930432 2774 dbSNP
rs1040787543 2779 dbSNP
rs1329464120 2781 dbSNP
rs1281496879 2784 dbSNP
rs1325727278 2790 dbSNP
rs943820641 2792 dbSNP
rs892330756 2793 dbSNP
rs1032216149 2801 dbSNP
rs1443219894 2802 dbSNP
rs1395226223 2805 dbSNP
rs1197355695 2812 dbSNP
rs1250959133 2813 dbSNP
rs116572716 2815 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545214. RNA binding protein: AGO3. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gguaGAAGG-AAGUCGgag 5'
              || || | :|||   
Target 5' ---cCUCCCAUGUAGCagg 3'
1 - 16
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545214
Method / RBP PAR-CLIP / AGO3
Cell line / Condition HEK293 / Control
Location of target site ENST00000360394.2 | 3UTR | CCUCCCAUGUAGCAGGAAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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