pre-miRNA Information
pre-miRNA hsa-mir-412   
Genomic Coordinates chr14: 101065447 - 101065537
Synonyms MIRN412, hsa-mir-412, MIR412
Description Homo sapiens miR-412 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-412-3p
Sequence 54| ACUUCACCUGGUCCACUAGCCGU |76
Evidence Not_experimental
Experiments
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
rs61992671 18 GWAS
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs369997462 1 dbSNP
rs1439693090 7 dbSNP
rs1301668924 11 dbSNP
rs534204576 13 dbSNP
rs775386036 14 dbSNP
rs762832140 15 dbSNP
rs1203323285 16 dbSNP
rs61992671 18 dbSNP
rs1022012324 19 dbSNP
rs1207609936 20 dbSNP
rs139967426 21 dbSNP
rs539487075 22 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MRPS14   
Synonyms DJ262D12.2, HSMRPS14, MRP-S14, S14mt
Description mitochondrial ribosomal protein S14
Transcript NM_022100   
Expression
Putative miRNA Targets on MRPS14
3'UTR of MRPS14
(miRNA target sites are highlighted)
>MRPS14|NM_022100|3'UTR
   1 ATGAGCTCCAGAACCTATTGAGCTTGCAGGGAAGCCAAGCTTGCAGTTCCAGCAAGCAAAGATTTTTTTTAATAGACCAA
  81 ACCCTAATCTCTACAGGGGCCCAGTACAGTTGTTTGGCCTACCTGATGCTATCTCTAAACTACTTTTAAAATGAAGACAT
 161 TTGGGTGTTTCATGTCAGTGAATTATCTTTTCTCTTGGACTTAACAAACATACTGTTCCCATACATAGTACAAAGAGTAG
 241 CATAATAAATATTTTCTGTGAATGTTTTTTATACCCTCCTTTTAAGTTTAATCTTTTAGTAACATATAGGGGTTTTTGTA
 321 TTAAGAGCATTATTTCATAAAATGCTATCTTATACATAATCCAACTAATTGACATGTAGCTCATGTATGGCAGTTTGTAA
 401 TCCTGGACTAGCTTTGCTGACCTGCAGAGCTCCCCTTAACTATTATTGTTAGATAAACAGATTGGATAGCAAGGCTGCTG
 481 TTCTGGATTATCTAATGCTCCACTTCTTCTTGTGATGGCTGAACAAAAGAACCACTAAGTGTTTTCTTGTCCATCCTTAA
 561 GGGACTTTAAAACAAATTATGCCTCTTTAAGTCCTTGAAAGTCTCCATCTAAAGAGGAAAAGTTTGTTGGAACAGTATAT
 641 ATTCCCTATTTTTATGTTTATTTAATCCATAACAGAAATGAGTAAGGGTAGCACAAAGTTCTCATTCAGTAACTCAACAG
 721 TGTGATCATCAGCCCAGTGATAAAAATATACATACTGAATGGAAGTACCTACTTAACATCAGGAAAATATTCCTGGAGAA
 801 CTTAATAAATCAGGAGGTGAGGGGTGAGATTTTTTTCTGCACACAGAGGGAACAAAAGCACAAAGAAGCAAAGGCACTCT
 881 GTAGCATCAGAGAACCACAGTCACTTCAGTAGATCAGAAATATGAAGCACAAGACAAGGCCCGTATTGTGGAGGATCTCA
 961 CAAATCATGTGAAGGAATTAAGACTGACATACCAGGTATTACAGAGTTTTAAGCACAGGAATGACATCATCAGTTTGTAA
1041 TACAGGTAAGTGACAGCTGTGTGGCAGATGGCCATGAGAGGAAAAAGCTACAGGCAAGACAACCAGTTAGGAGGATGTCT
1121 TAGTTGTTGAGGAAGATGAAGGCCTGAACTAACATTGTGGTATTAGTAGAGGAGAGAGGACAGATTTTTAAAGTTTTAGG
1201 AAAGAAAATTGGGCAAGACTTACAAGACTGATTATATCTAAGAGGTAAAGATGGTTCTCTGGGTTCCTGATAAAAGTGTC
1281 TAGATAGATGGTAGAGGGCAATTCCAAGAGGGCAACTCCAAGATAGAAAATTTGGAAAAAGAACAAATTTAGGGGAAACA
1361 GAAGATAAGCGAGTTCAGGTTCCAGTCATGCGGTGTTGGAGATGCCTGTGTCATCTGATGAAGACTAGTACGCAGCTGGA
1441 TAGCAGAGTCCGAAACTCAGGTGGAGGTGAAGTTATGAGGGAATTATCACAATCTAGTTTGGATTCATATTTCTTAAATA
1521 TGTATGACAACTTACCAACTGGAATGTTCTAGCTAATATCTCAACTTAGAATCCATCTCACTACCAATGGGCAAACACTT
1601 GTGTTCTAAAGTTACTTGCAAGTAGTTTATACTGCCAACTTGATATATATACATGCTATAGTTTGAACATTTTGTGTACT
1681 TCCAAAATTCACATTAAAATCTAATCCACAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugccGAUCACCUGGUCCACUUCa 5'
              | :||||   |||||||| 
Target 5' aactCAGGTGG---AGGTGAAGt 3'
1454 - 1473 156.00 -17.80
2
miRNA  3' ugccGAUCACCUGG---UCCACUUCa 5'
              :|| |  |:|   ||||||:| 
Target 5' gaacTTAATAAATCAGGAGGTGAGGg 3'
798 - 823 135.00 -11.10
3
miRNA  3' ugccgaucaccUGGUCCACUUCa 5'
                     |:|| |||||| 
Target 5' ggatctcacaaATCATGTGAAGg 3'
953 - 975 124.00 -9.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30457394 9 COSMIC
COSN1414007 22 COSMIC
COSN30143139 35 COSMIC
COSN30154278 93 COSMIC
COSN31534470 123 COSMIC
COSN31598500 164 COSMIC
COSN31479755 171 COSMIC
COSN30129989 213 COSMIC
COSN31487262 219 COSMIC
COSN31569292 221 COSMIC
COSN31609261 249 COSMIC
COSN31481782 256 COSMIC
COSN31547942 340 COSMIC
COSN31516556 358 COSMIC
COSN30538380 417 COSMIC
COSN20090408 444 COSMIC
COSN20095601 446 COSMIC
COSN26356203 842 COSMIC
COSN30382410 892 COSMIC
COSN32083295 1023 COSMIC
COSN1414005 1086 COSMIC
COSN16167138 1129 COSMIC
COSN20787548 1176 COSMIC
COSN7185210 1385 COSMIC
COSN16366661 1495 COSMIC
COSN6009157 1659 COSMIC
COSN30391687 1665 COSMIC
rs16847706 598 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1236566723 4 dbSNP
rs201569223 5 dbSNP
rs757033224 8 dbSNP
rs1325409777 11 dbSNP
rs1438875458 14 dbSNP
rs777197099 15 dbSNP
rs201209223 18 dbSNP
rs754256677 21 dbSNP
rs1199859379 32 dbSNP
rs1379407781 34 dbSNP
rs766887314 37 dbSNP
rs760964289 45 dbSNP
rs1353224840 46 dbSNP
rs368671197 49 dbSNP
rs772487730 49 dbSNP
rs759901081 51 dbSNP
rs998264656 52 dbSNP
rs3850 61 dbSNP
rs1172333870 62 dbSNP
rs867472764 65 dbSNP
rs981852978 71 dbSNP
rs1390421151 73 dbSNP
rs1018224726 78 dbSNP
rs1007136313 84 dbSNP
rs571798056 89 dbSNP
rs551878350 98 dbSNP
rs1021038900 105 dbSNP
rs1053930540 107 dbSNP
rs958233460 108 dbSNP
rs115356343 109 dbSNP
rs902656741 118 dbSNP
rs1417535035 120 dbSNP
rs1210611841 122 dbSNP
rs562504684 125 dbSNP
rs1251393023 131 dbSNP
rs1046594246 132 dbSNP
rs1431483226 133 dbSNP
rs889098940 136 dbSNP
rs1052212413 141 dbSNP
rs997576511 145 dbSNP
rs549264196 149 dbSNP
rs529221385 151 dbSNP
rs897915777 156 dbSNP
rs1293721739 158 dbSNP
rs1036489435 159 dbSNP
rs1402539339 165 dbSNP
rs949150719 170 dbSNP
rs1282026254 171 dbSNP
rs1058741 172 dbSNP
rs1054791326 173 dbSNP
rs909747789 174 dbSNP
rs185719379 185 dbSNP
rs1222087014 187 dbSNP
rs909135746 187 dbSNP
rs1267456212 194 dbSNP
rs983336848 200 dbSNP
rs1222025255 202 dbSNP
rs1236278951 211 dbSNP
rs1489324187 213 dbSNP
rs749585486 220 dbSNP
rs1192096804 223 dbSNP
rs1419473683 228 dbSNP
rs1349448786 231 dbSNP
rs950633746 233 dbSNP
rs923118632 238 dbSNP
rs1410762907 258 dbSNP
rs17302346 262 dbSNP
rs141657779 273 dbSNP
rs982185800 276 dbSNP
rs746205995 284 dbSNP
rs1360553702 292 dbSNP
rs1401363378 292 dbSNP
rs1287019515 297 dbSNP
rs984627 299 dbSNP
rs1018275382 311 dbSNP
rs1414371020 320 dbSNP
rs540782935 325 dbSNP
rs1174342755 327 dbSNP
rs1451763727 329 dbSNP
rs1245456823 341 dbSNP
rs1006854825 345 dbSNP
rs181451752 347 dbSNP
rs1183144648 349 dbSNP
rs1214627826 373 dbSNP
rs1473733480 374 dbSNP
rs1483831806 375 dbSNP
rs1255097059 383 dbSNP
rs576229787 384 dbSNP
rs1032942610 385 dbSNP
rs1032576094 387 dbSNP
rs1442880560 389 dbSNP
rs556525027 397 dbSNP
rs147983480 406 dbSNP
rs116067602 414 dbSNP
rs1327883188 419 dbSNP
rs1268279918 432 dbSNP
rs1344091793 434 dbSNP
rs1030294311 435 dbSNP
rs1304534677 439 dbSNP
rs554423838 442 dbSNP
rs757093473 443 dbSNP
rs1013789364 446 dbSNP
rs1282766623 456 dbSNP
rs1310257470 460 dbSNP
rs1447790910 460 dbSNP
rs534207291 462 dbSNP
rs1356191232 465 dbSNP
rs1341554652 467 dbSNP
rs1222295797 469 dbSNP
rs1015005532 481 dbSNP
rs1006335560 483 dbSNP
rs1312881651 501 dbSNP
rs1433597331 502 dbSNP
rs1387991199 504 dbSNP
rs1160050630 505 dbSNP
rs1458994947 507 dbSNP
rs1179731898 509 dbSNP
rs1411921822 512 dbSNP
rs1441081460 519 dbSNP
rs1162389699 521 dbSNP
rs894897125 532 dbSNP
rs1406541895 539 dbSNP
rs1048708448 550 dbSNP
rs1178102058 552 dbSNP
rs1054845701 553 dbSNP
rs905105421 565 dbSNP
rs571635113 580 dbSNP
rs1378843910 581 dbSNP
rs74317897 590 dbSNP
rs1248075731 593 dbSNP
rs1210107839 594 dbSNP
rs16847706 598 dbSNP
rs913593851 601 dbSNP
rs987826335 609 dbSNP
rs936438885 611 dbSNP
rs925441349 622 dbSNP
rs1201975656 626 dbSNP
rs1231991587 626 dbSNP
rs569333132 629 dbSNP
rs12741561 632 dbSNP
rs1426607179 635 dbSNP
rs1480031019 644 dbSNP
rs12754912 646 dbSNP
rs1171337793 648 dbSNP
rs929233454 649 dbSNP
rs1408050233 650 dbSNP
rs953612834 653 dbSNP
rs12741553 660 dbSNP
rs1286391727 662 dbSNP
rs1350756711 669 dbSNP
rs1438692021 672 dbSNP
rs1030993541 681 dbSNP
rs1226799313 683 dbSNP
rs1344996912 696 dbSNP
rs923138976 704 dbSNP
rs1280700228 711 dbSNP
rs1337816159 713 dbSNP
rs975943950 715 dbSNP
rs964867976 733 dbSNP
rs12737197 741 dbSNP
rs12741401 750 dbSNP
rs1271832545 759 dbSNP
rs777277961 760 dbSNP
rs1321242157 763 dbSNP
rs12741397 767 dbSNP
rs1224257642 777 dbSNP
rs12741387 786 dbSNP
rs12741386 787 dbSNP
rs1266102201 790 dbSNP
rs376554326 798 dbSNP
rs12755758 813 dbSNP
rs12755757 814 dbSNP
rs758206594 815 dbSNP
rs752267182 817 dbSNP
rs1348287507 818 dbSNP
rs1474303020 825 dbSNP
rs1167174271 827 dbSNP
rs1414280028 828 dbSNP
rs764606677 836 dbSNP
rs887859748 837 dbSNP
rs1365008920 840 dbSNP
rs1034476731 843 dbSNP
rs1400728870 845 dbSNP
rs1300578355 846 dbSNP
rs1032290430 855 dbSNP
rs1325262711 858 dbSNP
rs549266604 871 dbSNP
rs529072500 881 dbSNP
rs966985055 882 dbSNP
rs1025606300 899 dbSNP
rs1166530658 900 dbSNP
rs1448774415 904 dbSNP
rs1390736061 905 dbSNP
rs1013760008 910 dbSNP
rs371275903 912 dbSNP
rs1216773313 913 dbSNP
rs141447109 914 dbSNP
rs1221840409 915 dbSNP
rs949321482 922 dbSNP
rs892103086 923 dbSNP
rs1292443155 931 dbSNP
rs1446268799 932 dbSNP
rs1161883196 940 dbSNP
rs1420381150 942 dbSNP
rs189807999 943 dbSNP
rs760661639 956 dbSNP
rs12741068 960 dbSNP
rs1005962675 963 dbSNP
rs936386605 968 dbSNP
rs1400585729 969 dbSNP
rs762322918 973 dbSNP
rs1047390329 976 dbSNP
rs1342603721 994 dbSNP
rs774851238 997 dbSNP
rs1450975325 1004 dbSNP
rs1342019903 1006 dbSNP
rs1312443549 1007 dbSNP
rs12062145 1015 dbSNP
rs1240423419 1017 dbSNP
rs1261907343 1021 dbSNP
rs932130351 1023 dbSNP
rs923489068 1024 dbSNP
rs1230626018 1033 dbSNP
rs767326513 1035 dbSNP
rs1040666576 1037 dbSNP
rs138464982 1040 dbSNP
rs369008639 1043 dbSNP
rs367698240 1046 dbSNP
rs1440491839 1047 dbSNP
rs1437423116 1052 dbSNP
rs910368370 1061 dbSNP
rs563553841 1063 dbSNP
rs376704515 1069 dbSNP
rs1305901675 1070 dbSNP
rs1453194817 1072 dbSNP
rs1173647208 1075 dbSNP
rs1409015261 1078 dbSNP
rs1468559041 1079 dbSNP
rs879661964 1080 dbSNP
rs1401494344 1082 dbSNP
rs563689313 1085 dbSNP
rs1446996331 1090 dbSNP
rs1308752154 1091 dbSNP
rs543799703 1098 dbSNP
rs145829491 1101 dbSNP
rs561801809 1111 dbSNP
rs1275368051 1119 dbSNP
rs1431433196 1125 dbSNP
rs978117573 1126 dbSNP
rs1191317015 1137 dbSNP
rs1458071703 1145 dbSNP
rs542887739 1162 dbSNP
rs1249201020 1163 dbSNP
rs140657937 1164 dbSNP
rs1418563296 1165 dbSNP
rs554189835 1166 dbSNP
rs1482939324 1167 dbSNP
rs1275867259 1169 dbSNP
rs969603286 1170 dbSNP
rs1176360283 1171 dbSNP
rs146833893 1173 dbSNP
rs1424734609 1174 dbSNP
rs1463899509 1178 dbSNP
rs1311000952 1181 dbSNP
rs754870054 1182 dbSNP
rs1393971527 1193 dbSNP
rs865836836 1193 dbSNP
rs1219913593 1195 dbSNP
rs578076888 1197 dbSNP
rs558223289 1200 dbSNP
rs185303434 1209 dbSNP
rs1286689328 1214 dbSNP
rs1346874182 1219 dbSNP
rs1033841986 1224 dbSNP
rs892385803 1225 dbSNP
rs1052341684 1227 dbSNP
rs1318307830 1231 dbSNP
rs1000933412 1234 dbSNP
rs903548296 1234 dbSNP
rs1050583726 1237 dbSNP
rs931760673 1238 dbSNP
rs1271075708 1241 dbSNP
rs1489888072 1247 dbSNP
rs1006016480 1250 dbSNP
rs887531907 1252 dbSNP
rs1168698710 1257 dbSNP
rs181708929 1262 dbSNP
rs940876141 1263 dbSNP
rs555812615 1271 dbSNP
rs1461129692 1276 dbSNP
rs1163863319 1284 dbSNP
rs751389074 1285 dbSNP
rs1309664406 1289 dbSNP
rs1366861186 1290 dbSNP
rs1402612567 1291 dbSNP
rs1026449025 1298 dbSNP
rs529227563 1301 dbSNP
rs1302456458 1304 dbSNP
rs1464463212 1308 dbSNP
rs565005930 1313 dbSNP
rs769805366 1318 dbSNP
rs1293102265 1320 dbSNP
rs952129288 1322 dbSNP
rs745940097 1339 dbSNP
rs927329892 1344 dbSNP
rs901483122 1345 dbSNP
rs1221934209 1347 dbSNP
rs1182161426 1350 dbSNP
rs1040316838 1354 dbSNP
rs1487105142 1356 dbSNP
rs1180987264 1363 dbSNP
rs1185311339 1363 dbSNP
rs781451557 1364 dbSNP
rs1424801190 1365 dbSNP
rs943275882 1370 dbSNP
rs1024730133 1378 dbSNP
rs888982302 1383 dbSNP
rs757469357 1386 dbSNP
rs1013363901 1388 dbSNP
rs189399109 1391 dbSNP
rs1453181983 1392 dbSNP
rs566617733 1393 dbSNP
rs1482537261 1396 dbSNP
rs1245540859 1397 dbSNP
rs1237445175 1402 dbSNP
rs546500884 1408 dbSNP
rs1210826528 1413 dbSNP
rs1260705774 1416 dbSNP
rs1483775244 1424 dbSNP
rs1185882592 1428 dbSNP
rs184567372 1431 dbSNP
rs1266379679 1432 dbSNP
rs945414082 1445 dbSNP
rs1442331633 1446 dbSNP
rs80331520 1451 dbSNP
rs992446661 1452 dbSNP
rs1330135950 1458 dbSNP
rs959611250 1471 dbSNP
rs1156808483 1476 dbSNP
rs752534293 1480 dbSNP
rs34838911 1484 dbSNP
rs1394103534 1491 dbSNP
rs901587150 1492 dbSNP
rs550190540 1493 dbSNP
rs1403666856 1496 dbSNP
rs1452139791 1502 dbSNP
rs191307922 1507 dbSNP
rs940822401 1508 dbSNP
rs1450193745 1514 dbSNP
rs1385798230 1516 dbSNP
rs1306908910 1518 dbSNP
rs984967427 1523 dbSNP
rs1324812756 1524 dbSNP
rs1157828948 1530 dbSNP
rs908071877 1538 dbSNP
rs1261602139 1540 dbSNP
rs1049750155 1545 dbSNP
rs952282691 1549 dbSNP
rs1233145919 1551 dbSNP
rs1174908816 1556 dbSNP
rs1481328090 1556 dbSNP
rs1406629712 1558 dbSNP
rs1413750456 1559 dbSNP
rs1178540159 1562 dbSNP
rs149801718 1565 dbSNP
rs927247549 1568 dbSNP
rs1329777120 1569 dbSNP
rs1356563164 1575 dbSNP
rs776589717 1577 dbSNP
rs971837552 1582 dbSNP
rs1198688207 1586 dbSNP
rs1225844800 1595 dbSNP
rs1182938360 1601 dbSNP
rs988877906 1608 dbSNP
rs1275562575 1615 dbSNP
rs1439138490 1628 dbSNP
rs956524285 1632 dbSNP
rs965770774 1638 dbSNP
rs1019018079 1639 dbSNP
rs1202036776 1640 dbSNP
rs1250379802 1642 dbSNP
rs1490382486 1643 dbSNP
rs375410934 1646 dbSNP
rs540875759 1649 dbSNP
rs541880383 1652 dbSNP
rs967992491 1658 dbSNP
rs889034384 1659 dbSNP
rs1029361141 1662 dbSNP
rs545206633 1663 dbSNP
rs529466614 1664 dbSNP
rs560627676 1669 dbSNP
rs1301818697 1675 dbSNP
rs1345363745 1676 dbSNP
rs1432131128 1685 dbSNP
rs1272242701 1688 dbSNP
rs1262713945 1696 dbSNP
rs1337893773 1696 dbSNP
rs764189230 1700 dbSNP
rs1054265939 1702 dbSNP
rs1273533873 1712 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545213. RNA binding protein: AGO2. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugccgaucaccUG-GUCCACUUCa 5'
                     || ||||||:|| 
Target 5' -----uccgaaACUCAGGUGGAGg 3'
1 - 19
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545213
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / Control
Location of target site ENST00000476371.1 | 3UTR | UCCGAAACUCAGGUGGAGGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
Click to see details
138 hsa-miR-412-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT005780 ACVR1C activin A receptor type 1C 1 1
MIRT062013 YOD1 YOD1 deubiquitinase 2 2
MIRT345112 ATXN7L3 ataxin 7 like 3 2 2
MIRT383735 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT396956 CELF1 CUGBP Elav-like family member 1 2 2
MIRT439280 XIAP X-linked inhibitor of apoptosis 1 1
MIRT439313 VAT1 vesicle amine transport 1 1 1
MIRT439375 TUBA1A tubulin alpha 1a 1 1
MIRT439418 TMOD1 tropomodulin 1 1 1
MIRT439503 SURF4 surfeit 4 1 1
MIRT439563 SON SON DNA binding protein 1 1
MIRT439598 SLC3A2 solute carrier family 3 member 2 1 1
MIRT439670 SETD1B SET domain containing 1B 1 1
MIRT439767 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT439922 PPL periplakin 1 1
MIRT439947 PLEKHA6 pleckstrin homology domain containing A6 1 1
MIRT439952 PLCB4 phospholipase C beta 4 1 1
MIRT439961 PKD1 polycystin 1, transient receptor potential channel interacting 1 1
MIRT440005 PEG3 paternally expressed 3 1 1
MIRT440061 OSBPL8 oxysterol binding protein like 8 1 1
MIRT440166 MYH14 myosin heavy chain 14 1 1
MIRT440276 MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1 1 1
MIRT440437 IPO13 importin 13 1 1
MIRT440441 INTS3 integrator complex subunit 3 1 1
MIRT440448 INS insulin 1 1
MIRT440461 IGF2R insulin like growth factor 2 receptor 1 1
MIRT440472 IARS isoleucyl-tRNA synthetase 1 1
MIRT440530 GUCY1A3 guanylate cyclase 1 soluble subunit alpha 1 1
MIRT440542 GOLGA2 golgin A2 1 1
MIRT440569 GIGYF1 GRB10 interacting GYF protein 1 1 1
MIRT440608 FTSJD2 cap methyltransferase 1 1 1
MIRT440750 EEF1A2 eukaryotic translation elongation factor 1 alpha 2 1 1
MIRT440781 DOT1L DOT1 like histone lysine methyltransferase 1 1
MIRT440804 DNAJA4 DnaJ heat shock protein family (Hsp40) member A4 1 1
MIRT440867 CSDE1 cold shock domain containing E1 1 1
MIRT440890 CPEB4 cytoplasmic polyadenylation element binding protein 4 1 1
MIRT440917 COL1A1 collagen type I alpha 1 chain 1 1
MIRT440967 CDH22 cadherin 22 1 1
MIRT440968 CDH2 cadherin 2 1 1
MIRT441024 CALR calreticulin 1 1
MIRT441278 ACTB actin beta 1 1
MIRT448421 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT462833 BCL3 B-cell CLL/lymphoma 3 2 2
MIRT465062 TSR1 TSR1, ribosome maturation factor 2 2
MIRT476050 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT485318 MZT1 mitotic spindle organizing protein 1 2 4
MIRT493584 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 6
MIRT494567 BAK1 BCL2 antagonist/killer 1 2 2
MIRT497393 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT503250 ZNF257 zinc finger protein 257 2 10
MIRT503656 ZNF138 zinc finger protein 138 2 10
MIRT505882 RNF219 ring finger protein 219 2 2
MIRT507525 DSTN destrin, actin depolymerizing factor 2 4
MIRT510663 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 4
MIRT514682 ZNF701 zinc finger protein 701 2 4
MIRT515370 ZNF208 zinc finger protein 208 2 6
MIRT525237 KCNJ12 potassium voltage-gated channel subfamily J member 12 2 2
MIRT527963 MTAP methylthioadenosine phosphorylase 2 2
MIRT528482 STAMBPL1 STAM binding protein like 1 2 2
MIRT529909 C1orf64 steroid receptor associated and regulated protein 2 4
MIRT531558 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT532234 KLF2 Kruppel like factor 2 2 4
MIRT532480 HOXA13 homeobox A13 2 2
MIRT535544 P2RY2 purinergic receptor P2Y2 2 2
MIRT547311 NR1D2 nuclear receptor subfamily 1 group D member 2 2 2
MIRT551795 ZNF117 zinc finger protein 117 2 4
MIRT554939 RAP1A RAP1A, member of RAS oncogene family 2 2
MIRT558171 EIF5A2 eukaryotic translation initiation factor 5A2 2 2
MIRT568771 LY6K lymphocyte antigen 6 family member K 2 2
MIRT570766 ZNF99 zinc finger protein 99 2 2
MIRT572405 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT573396 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT610403 RXRB retinoid X receptor beta 2 2
MIRT610886 SCN8A sodium voltage-gated channel alpha subunit 8 2 2
MIRT611197 TMEM105 transmembrane protein 105 2 2
MIRT611244 ZNF550 zinc finger protein 550 2 2
MIRT615669 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 4
MIRT617974 DOCK4 dedicator of cytokinesis 4 2 2
MIRT619150 ZNF326 zinc finger protein 326 2 2
MIRT619608 MKKS McKusick-Kaufman syndrome 2 2
MIRT621053 DGKD diacylglycerol kinase delta 2 2
MIRT623665 HRK harakiri, BCL2 interacting protein 2 2
MIRT624883 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2 2
MIRT624939 MARCH2 membrane associated ring-CH-type finger 2 2 2
MIRT634198 TMOD2 tropomodulin 2 2 4
MIRT636727 AGO2 argonaute 2, RISC catalytic component 2 2
MIRT637741 POLR3K RNA polymerase III subunit K 2 2
MIRT638002 ZC3H13 zinc finger CCCH-type containing 13 2 2
MIRT640395 ZNF785 zinc finger protein 785 2 2
MIRT640505 ANTXR1 anthrax toxin receptor 1 2 2
MIRT641293 SLAMF1 signaling lymphocytic activation molecule family member 1 2 2
MIRT641863 STOML1 stomatin like 1 2 2
MIRT642600 C14orf180 chromosome 14 open reading frame 180 2 2
MIRT642895 CASP1 caspase 1 2 2
MIRT643967 FHL2 four and a half LIM domains 2 2 4
MIRT645237 KCTD12 potassium channel tetramerization domain containing 12 2 2
MIRT646621 CENPL centromere protein L 2 2
MIRT648620 CYB561A3 cytochrome b561 family member A3 2 2
MIRT648908 ZNF551 zinc finger protein 551 2 2
MIRT649439 HIBADH 3-hydroxyisobutyrate dehydrogenase 2 2
MIRT650637 LTF lactotransferrin 2 2
MIRT650971 STARD3NL STARD3 N-terminal like 2 2
MIRT651067 ZNF518B zinc finger protein 518B 2 4
MIRT652384 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT653958 SEPN1 selenoprotein N 2 2
MIRT656885 KIF1C kinesin family member 1C 2 2
MIRT657965 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT658080 FOXR2 forkhead box R2 2 2
MIRT662570 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT663089 METTL10 EEF1A lysine methyltransferase 2 2 2
MIRT683705 ZNF195 zinc finger protein 195 2 2
MIRT683835 ZNF682 zinc finger protein 682 2 2
MIRT706811 APOL4 apolipoprotein L4 2 2
MIRT707575 DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 2 2
MIRT708606 ZNF260 zinc finger protein 260 2 2
MIRT708859 TMSB4X thymosin beta 4, X-linked 2 2
MIRT709861 PDIK1L PDLIM1 interacting kinase 1 like 2 2
MIRT709987 RBM41 RNA binding motif protein 41 2 2
MIRT710098 KPNA5 karyopherin subunit alpha 5 2 2
MIRT710211 ENAH ENAH, actin regulator 2 2
MIRT710868 B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 2 2
MIRT710986 SUSD5 sushi domain containing 5 2 2
MIRT711460 RNF145 ring finger protein 145 2 2
MIRT712302 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT713609 SYTL4 synaptotagmin like 4 2 2
MIRT713789 MAK16 MAK16 homolog 2 2
MIRT715480 MYO9B myosin IXB 2 2
MIRT716328 POU5F1 POU class 5 homeobox 1 2 2
MIRT717252 TMEM246 transmembrane protein 246 2 2
MIRT718077 CLIC5 chloride intracellular channel 5 2 2
MIRT718463 EED embryonic ectoderm development 2 2
MIRT718645 NKPD1 NTPase KAP family P-loop domain containing 1 2 2
MIRT718982 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 2
MIRT721078 RPS9 ribosomal protein S9 2 2
MIRT721419 SEC24A SEC24 homolog A, COPII coat complex component 2 2
MIRT721863 CENPJ centromere protein J 2 2
MIRT722492 PNKD paroxysmal nonkinesigenic dyskinesia 2 2
MIRT723391 CALN1 calneuron 1 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-412 Gemcitabine approved 60750 Northern blot Mz-ChA-1 human cholangiocarcinoma cell lines 16762633 2006 down-regulated
miR-412 Progesterone approved 5994 Microarray Breast cancer 22330642 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-412 Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-412 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-412-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (RKO)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (HCT-116)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved sensitive High Anaplastic Thyroid Cancer tissue
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM47)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM43)
hsa-miR-412-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-412-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-412-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (Panc1-GR1)
hsa-miR-412-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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